Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006338

Physical Location & Seq

Genomic Coordinates Forward (+)

15892828 .. 15896583

Gene Structure 3756 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G145600.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGGAGAAAATGGCGGCAGCAGCAGCAGCAGCTGAGAAGCCCAGCTCCAAAGGACAAGCATGGTTCTGCACCACTGGGTTACCAAGCGACATTGTGGTCGAAGTCGATGACATGACCTTCCATCTCCACAAGTTTCCTCTCATGTCAAAAAGCCGGAAGCTTCACAACCTGATCACAGAGCAAGAGACGAACCCATCGCAAACCCGCCAACAAATTGAAGAGCAGGATGAGAACGATGACGAAATCGAAGAAGTTCAGTGCCAAATAGCTCTCTCTGACTTCCCCGGCGGCTCAGAGACCTTCGAAATAGCAGCTAAGTTCTGCTATGGCGTCAAGATCGACTTGAGCTCCTCCAATGTCGCGCCTCTGCGCTGCGCAGGAGAGTATCTGGAAATGACCGAAGAGTACTCAGAAGATAACCTCATTTCCAAGACCGAGAGGTTTCTCTCTCAGTCTGTGTTGAAGAGCTTCAAGGAATCGCTCAAAGCTCTCAAGTCCTGCGAACGAGTGATGCCTCTTGCAGAGACTTTGGGTATTACGCAGACGTGCATAGACTCCATCGCCTCCCGCGCCACGTCAGCCGATCCCACCCTGTTTGGCTGGCCGGTTAGCGAAGCACCCAATGCGAATACAAATGCGATTTCTTCTTCTTCTTCCACCAAACAGCAGATTTTGTGGAATGGGATCGACGCCGGTGGCGGCGGTGGACGAAGAAGAGGCCTTTCCAAACACGCAGATTCCTGGGTTGAAGATTTGGTGGTTTTGAGCTTGCCTCTGTTCAAGCGATTGATTTCCGCCATGAAATCTGGAGATCTAAGCTTGGAGATGGTGGAGACTTGTTTGATGCATTACGCTAAGAAGTACATTCCTGGAATTTCAAGAACAAATCGAAAGCCTCCATCTTCTATCTCCGCCGTCACCGCCACCACAACCTCATCGTCTTTAGCTTCGGAGAGTCAACAGCGAGAGCTTTTGGAGACGATCATCTCCAATCTTCCATTGGAGAAGAGCTCCAGACCTTCCACCGCTACTCGTTTCCTCTTTGGACTGCTGAGAACCGCCAACATACTCAATGCCTCCGAGGCCTGCAAAGCCGCGTTGGAGAAGAAGATCGCTTCGCAGCTCCACCAAGCCACCTTAGACGACCTTCTCATCCCGAGCTACTCGTACCTCAACGAGACTCTCTACGACGTCGATTGCGTCGAGAGGATCTTAGGTTACTTCTTGAAAGGCTTGGATCAGAGAAACACAGCCGGAATCGGAGAAGACGACGGTTCTGACGGTGCTGTCAGATCGCCGACGTTGATGCTCGTCGGAAAATTAATCGACGAGTTTCTCTCCGAGATCGCCTCCGACGCGAATCTCAAGCCGGACCGATTCTACAATCTCGCGATTTCTCTACCTGAACAAGCTCGGCTCTTCGACGACGGTCTTTACAGAGCCGTCGATCTCTATCTCAAGGCTCATCCATGGATAACGGAACCAGAGCGCGAGAAGATCTGCGGAATTTTAGACTGCCAGAAGCTCACGCTCGAGGCTTGCACGCACGCGGCGCAGAACGAGCGGTTGCCTCTGCGCGCGGTGGTGCAAGTTCTGTTCTTCGAGCAGCTCCAGCTCCGGCACGCCATCGCCGGAACTCTGCTCGCAACCGACGTCGCTCCCCCGGACTCGGGCAGGCCATCGGTCCTGCAACGCGAACGACAGGGAGAGGAGGAGGAGGAAGAGGACGACGCGGAGGCACGTGCGGAGGAAGATGGGGATAATGTGGCACGTGCAAATAATAGTGGGGGCGGCACGTGGCGGGCGGCAGTGAGGGAGAATCAGGTGTTGCGCTTGGATATGGATAGCATGAGGACGCGGGTGCACCAGCTGGAGCGGGAATGCTCCAACATGAAAAAGGTGATCGAGAAGATTGATAATCCGGGTCAGCCCAGGAGGGACGGGTCGGTTTGGAAGGACTCGTTGAGCCGGAGGTTCGGGTGTAAGTTCAAGACCCAAGTGTGTGATTCGCACGAAGCCACGGCCGTTGATACTAGGAAAGGACGGCGACACCATCATCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

688

Amino Acids

76.17

Weight (kDa)

5.31

Isoelectric Point (pI)

52.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006338)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66560 AT5G66560 AT5G66560 AT5G66560
fragaria_vesca	FvH4_1g14470 FvH4_1g14470 FvH4_1g14470 FvH4_1g14470 FvH4_1g14470
malus_domestica	MD02G1158300.v1.1 MD15G1273100.v1.1
prunus_persica	Prupe.7G145600_v2.0.a1 Prupe.7G145600_v2.0.a1 Prupe.7G145600_v2.0.a1 Prupe.7G145600_v2.0.a1
pyrus_communis	pycom02g12480 pycom15g23630
rosa_chinensis	RchiOBHm_Chr2g0103231
rosa_laevigata	RLG00000017216
rosa_multiflora	Rmu_sc0002218.1_g000002
rosa_roxburghii	Rroxscaffold_2G00139850
rosa_rugosa	Rorug02G0112500
rosa_samantha	Rh2AG161200 Rh2BG168000 Rh2CG168200 Rh2DG166900
rosa_wichuraiana	Rw2G012650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	95, 1286
AatII	GACGTC	2 cut(s)	1194, 1656
Acc16I	TGCGCA	1 cut(s)	376
AccBSI	CCGCTC	2 cut(s)	1564, 1876
AclWI	GGATC	4 cut(s)	578, 692, 1217, 1245
AcoI	YGGCCR	2 cut(s)	602, 2022
AcsI	RAATTY	2 cut(s)	873, 1506
AcvI	CACGTG	3 cut(s)	1742, 1772, 1797
AcyI	GRCGYC	4 cut(s)	330, 690, 1191, 1653
AfaI	GTAC	3 cut(s)	407, 863, 1169
AfiI	CCNNNNNNNGG	2 cut(s)	1669, 1670
AgsI	TTSAA	8 cut(s)	218, 463, 472, 749, 781, 879, 1228, 1990
AjiI	CACGTC	2 cut(s)	546, 576
AjnI	CCWGG	3 cut(s)	740, 868, 1931
Alw21I	GWGCWC	3 cut(s)	350, 1013, 1866
Alw26I	GTCTC	6 cut(s)	179, 290, 518, 827, 971, 1172
Alw44I	GTGCAC	1 cut(s)	1862
AlwI	GGATC	4 cut(s)	578, 692, 1217, 1245
AlwNI	CAGNNNCTG	1 cut(s)	32
Ama87I	CYCGRG	3 cut(s)	1156, 1532, 1669
AoxI	GGCC	5 cut(s)	602, 718, 1083, 1676, 2022
ApaLI	GTGCAC	1 cut(s)	1862
ApeKI	GCWGC	9 cut(s)	17, 20, 23, 26, 29, 311, 372, 1120, 1606
ApoI	RAATTY	2 cut(s)	873, 1506
AseI	ATTAAT	1 cut(s)	1322
Asp700I	GAANNNNTTC	2 cut(s)	252, 467
AspLEI	GCGC	9 cut(s)	364, 372, 377, 572, 1491, 1555, 1578, 1580, 1833
AspS9I	GGNCC	2 cut(s)	1372, 1684
AsuC2I	CCSGG	3 cut(s)	285, 1664, 1923
AsuHPI	GGTGA	2 cut(s)	910, 1912
AsuII	TTCGAA	1 cut(s)	303
AvaI	CYCGRG	3 cut(s)	1156, 1532, 1669
AvaII	GGWCC	2 cut(s)	1372, 1684
BaeGI	GKGCMC	1 cut(s)	1866
BanII	GRGCYC	2 cut(s)	350, 1013
BbrPI	CACGTG	3 cut(s)	1742, 1772, 1797
BbsI	GAAGAC	1 cut(s)	1272
Bbv12I	GWGCWC	3 cut(s)	350, 1013, 1866
BbvI	GCAGC	9 cut(s)	29, 32, 35, 38, 41, 323, 359, 1132, 1618
BccI	CCATC	9 cut(s)	129, 202, 566, 820, 907, 1634, 1687, 1748, 2061
BceAI	ACGGC	5 cut(s)	899, 1427, 2009, 2037, 2060
BcgI	CGANNNNNNTGC	2 cut(s)	1288, 1322
BciT130I	CCWGG	3 cut(s)	742, 870, 1933
BclI	TGATCA	1 cut(s)	171
BcnI	CCSGG	3 cut(s)	285, 1664, 1923
BcoDI	GTCTC	6 cut(s)	179, 290, 518, 827, 971, 1172
BfaI	CTAG	1 cut(s)	2034
BglI	GCCNNNNNGGC	1 cut(s)	1082
BglII	AGATCT	2 cut(s)	811, 1497
BmcAI	AGTACT	1 cut(s)	407
Bme1390I	CCNGG	6 cut(s)	285, 742, 870, 1664, 1923, 1933
Bme18I	GGWCC	2 cut(s)	1372, 1684
BmeT110I	CYCGRG	3 cut(s)	1156, 1532, 1669
BmgBI	CACGTC	2 cut(s)	546, 576
BmgT120I	GGNCC	2 cut(s)	1372, 1684
BmiI	GGNNCC	1 cut(s)	1482
BmrFI	CCNGG	6 cut(s)	285, 742, 870, 1664, 1923, 1933
BmrI	ACTGGG	1 cut(s)	84
BmsI	GCATC	3 cut(s)	501, 834, 1296
BmuI	ACTGGG	1 cut(s)	84
BoxI	GACNNNNGTC	1 cut(s)	1428
BpiI	GAAGAC	1 cut(s)	1272
BplI	GAGNNNNNCTC	8 cut(s)	757, 789, 995, 1027, 1322, 1354, 1334, 1366
BpmI	CTGGAG	4 cut(s)	828, 997, 1595, 1892
Bpu14I	TTCGAA	1 cut(s)	303
BpuEI	CTTGAG	4 cut(s)	364, 476, 1349, 1442
BpuMI	CCSGG	3 cut(s)	285, 1664, 1923
BsaAI	YACGTR	3 cut(s)	1742, 1772, 1797
BsaBI	GATNNNNATC	1 cut(s)	1452
BsaHI	GRCGYC	4 cut(s)	330, 690, 1191, 1653
BsaI	GGTCTC	1 cut(s)	290
BsaJI	CCNNGG	7 cut(s)	283, 741, 1080, 1469, 1662, 1931, 2019
BsaXI	ACNNNNNCTCC	2 cut(s)	332, 362
Bsc4I	CCNNNNNNNGG	2 cut(s)	1669, 1670
Bse118I	RCCGGY	2 cut(s)	604, 692
Bse1I	ACTGG	1 cut(s)	79
Bse8I	GATNNNNATC	1 cut(s)	1452
BseBI	CCWGG	3 cut(s)	742, 870, 1933
BseDI	CCNNGG	7 cut(s)	283, 741, 1080, 1469, 1662, 1931, 2019
BseGI	GGATG	3 cut(s)	232, 1152, 1465
BseJI	GATNNNNATC	1 cut(s)	1452
BseLI	CCNNNNNNNGG	2 cut(s)	1669, 1670
BseMII	CTCAG	5 cut(s)	24, 306, 423, 464, 1043
BseNI	ACTGG	1 cut(s)	79
BsePI	GCGCGC	1 cut(s)	1576
BseRI	GAGGAG	4 cut(s)	340, 1724, 1727, 1730
BseSI	GKGCMC	1 cut(s)	1866
BseX3I	CGGCCG	1 cut(s)	2022
BseXI	GCAGC	9 cut(s)	29, 32, 35, 38, 41, 323, 359, 1132, 1618
BseYI	CCCAGC	1 cut(s)	41
BsgI	GTGCAG	1 cut(s)	52
Bsh1285I	CGRYCG	1 cut(s)	2025
BshFI	GGCC	5 cut(s)	604, 720, 1085, 1678, 2024
BsiEI	CGRYCG	1 cut(s)	2025
BsiHKAI	GWGCWC	3 cut(s)	350, 1013, 1866
BsiHKCI	CYCGRG	3 cut(s)	1156, 1532, 1669
BslFI	GGGAC	1 cut(s)	1952
BslI	CCNNNNNNNGG	2 cut(s)	1669, 1670
BsmAI	GTCTC	6 cut(s)	179, 290, 518, 827, 971, 1172
BsmBI	CGTCTC	2 cut(s)	179, 971
BsmFI	GGGAC	1 cut(s)	1952
BsmI	GAATGC	1 cut(s)	1886
BsnI	GGCC	5 cut(s)	604, 720, 1085, 1678, 2024
Bso31I	GGTCTC	1 cut(s)	290
BsoBI	CYCGRG	3 cut(s)	1156, 1532, 1669
Bsp119I	TTCGAA	1 cut(s)	303
Bsp1286I	GDGCHC	3 cut(s)	350, 1013, 1866
Bsp19I	CCATGG	1 cut(s)	1469
Bsp68I	TCGCGA	1 cut(s)	1391
BspANI	GGCC	5 cut(s)	604, 720, 1085, 1678, 2024
BspCNI	CTCAG	5 cut(s)	25, 305, 422, 463, 1044
BspLI	GGNNCC	1 cut(s)	1482
BspPI	GGATC	4 cut(s)	578, 692, 1217, 1245
BspQI	GCTCTTC	4 cut(s)	213, 458, 1001, 1424
BspT104I	TTCGAA	1 cut(s)	303
BspTNI	GGTCTC	1 cut(s)	290
BsrBI	CCGCTC	2 cut(s)	1564, 1876
BsrFI	RCCGGY	2 cut(s)	604, 692
BsrI	ACTGG	1 cut(s)	79
BssAI	RCCGGY	2 cut(s)	604, 692
BssECI	CCNNGG	7 cut(s)	283, 741, 1080, 1469, 1662, 1931, 2019
BssHII	GCGCGC	1 cut(s)	1576
BssNI	GRCGYC	4 cut(s)	330, 690, 1191, 1653
BssT1I	CCWWGG	1 cut(s)	1469
Bst2UI	CCWGG	3 cut(s)	742, 870, 1933
Bst4CI	ACNGT	3 cut(s)	1274, 1283, 1430
Bst6I	CTCTTC	7 cut(s)	213, 396, 458, 709, 1001, 1424, 1716
BstACI	GRCGYC	4 cut(s)	330, 690, 1191, 1653
BstAPI	GCANNNNNTGC	1 cut(s)	623
BstBAI	YACGTR	3 cut(s)	1742, 1772, 1797
BstBI	TTCGAA	1 cut(s)	303
BstDSI	CCRYGG	2 cut(s)	1469, 2019
BstEII	GGTNACC	1 cut(s)	78
BstF5I	GGATG	3 cut(s)	232, 1152, 1465
BstHHI	GCGC	9 cut(s)	364, 372, 377, 572, 1491, 1555, 1578, 1580, 1833
BstMAI	GTCTC	6 cut(s)	179, 290, 518, 827, 971, 1172
BstMCI	CGRYCG	1 cut(s)	2025
BstNI	CCWGG	3 cut(s)	742, 870, 1933
BstPAI	GACNNNNGTC	1 cut(s)	1428
BstPI	GGTNACC	1 cut(s)	78
BstSCI	CCNGG	6 cut(s)	283, 740, 868, 1662, 1921, 1931
BstSLI	GKGCMC	1 cut(s)	1866
BstV1I	GCAGC	9 cut(s)	29, 32, 35, 38, 41, 323, 359, 1132, 1618
BstV2I	GAAGAC	1 cut(s)	1272
BstX2I	RGATCY	3 cut(s)	811, 1209, 1497
BstYI	RGATCY	3 cut(s)	811, 1209, 1497
BstZI	CGGCCG	1 cut(s)	2022
BsuRI	GGCC	5 cut(s)	604, 720, 1085, 1678, 2024
BtgI	CCRYGG	2 cut(s)	1469, 2019
BtgZI	GCGATG	3 cut(s)	180, 544, 1612
BtrI	CACGTC	2 cut(s)	546, 576
BtsCI	GGATG	3 cut(s)	232, 1152, 1465
BtsI	GCAGTG	1 cut(s)	1815
BtsIMutI	CAGTG	3 cut(s)	72, 263, 1815
BtuMI	TCGCGA	1 cut(s)	1391
CaiI	CAGNNNCTG	1 cut(s)	32
CfoI	GCGC	9 cut(s)	364, 372, 377, 572, 1491, 1555, 1578, 1580, 1833
Cfr10I	RCCGGY	2 cut(s)	604, 692
Cfr13I	GGNCC	2 cut(s)	1372, 1684
CpoI	CGGWCCG	1 cut(s)	1372
CseI	GACGC	6 cut(s)	319, 698, 1189, 1364, 1739, 1864
Csp6I	GTAC	3 cut(s)	406, 862, 1168
CspCI	CAANNNNNGTGG	4 cut(s)	577, 612, 2008, 2043
CspI	CGGWCCG	1 cut(s)	1372
CviAII	CATG	7 cut(s)	60, 112, 142, 799, 1470, 1849, 1891
CviQI	GTAC	3 cut(s)	406, 862, 1168
DrdI	GACNNNNNNGTC	2 cut(s)	95, 1286
DseDI	GACNNNNNNGTC	2 cut(s)	95, 1286
EaeI	YGGCCR	2 cut(s)	602, 2022
EagI	CGGCCG	1 cut(s)	2022
Eam1104I	CTCTTC	7 cut(s)	213, 396, 458, 709, 1001, 1424, 1716
EarI	CTCTTC	7 cut(s)	213, 396, 458, 709, 1001, 1424, 1716
EciI	GGCGGA	2 cut(s)	784, 901
Ecl136II	GAGCTC	2 cut(s)	348, 1011
EclXI	CGGCCG	1 cut(s)	2022
Eco130I	CCWWGG	1 cut(s)	1469
Eco147I	AGGCCT	2 cut(s)	720, 1085
Eco24I	GRGCYC	2 cut(s)	350, 1013
Eco31I	GGTCTC	1 cut(s)	290
Eco47I	GGWCC	2 cut(s)	1372, 1684
Eco52I	CGGCCG	1 cut(s)	2022
Eco53kI	GAGCTC	2 cut(s)	348, 1011
Eco72I	CACGTG	3 cut(s)	1742, 1772, 1797
Eco88I	CYCGRG	3 cut(s)	1156, 1532, 1669
Eco91I	GGTNACC	1 cut(s)	78
EcoICRI	GAGCTC	2 cut(s)	348, 1011
EcoO65I	GGTNACC	1 cut(s)	78
EcoRII	CCWGG	3 cut(s)	740, 868, 1931
EcoT14I	CCWWGG	1 cut(s)	1469
EcoT22I	ATGCAT	1 cut(s)	849
EcoT38I	GRGCYC	2 cut(s)	350, 1013
ErhI	CCWWGG	1 cut(s)	1469
Esp3I	CGTCTC	2 cut(s)	179, 971
FaeI	CATG	7 cut(s)	63, 115, 145, 802, 1473, 1852, 1894
FalI	AAGNNNNNCTT	2 cut(s)	326, 358
FaqI	GGGAC	1 cut(s)	1952
FatI	CATG	7 cut(s)	59, 111, 141, 798, 1469, 1848, 1890
FauI	CCCGC	5 cut(s)	212, 575, 1794, 1851, 1869
FbaI	TGATCA	1 cut(s)	171
FokI	GGATG	3 cut(s)	239, 1139, 1452
FriOI	GRGCYC	2 cut(s)	350, 1013
FspBI	CTAG	1 cut(s)	2034
FspI	TGCGCA	1 cut(s)	376
GlaI	GCGC	9 cut(s)	363, 371, 376, 571, 1490, 1554, 1577, 1579, 1832
GsaI	CCCAGC	1 cut(s)	45
GsuI	CTGGAG	4 cut(s)	828, 997, 1595, 1892
HaeIII	GGCC	5 cut(s)	604, 720, 1085, 1678, 2024
HgaI	GACGC	6 cut(s)	319, 698, 1189, 1364, 1739, 1864
HhaI	GCGC	9 cut(s)	364, 372, 377, 572, 1491, 1555, 1578, 1580, 1833
Hin1I	GRCGYC	4 cut(s)	330, 690, 1191, 1653
Hin1II	CATG	7 cut(s)	63, 115, 145, 802, 1473, 1852, 1894
Hin6I	GCGC	9 cut(s)	362, 370, 375, 570, 1489, 1553, 1576, 1578, 1831
HinP1I	GCGC	9 cut(s)	362, 370, 375, 570, 1489, 1553, 1576, 1578, 1831
HincII	GTYRAC	1 cut(s)	959
HindII	GTYRAC	1 cut(s)	959
HindIII	AAGCTT	2 cut(s)	158, 817
HphI	GGTGA	2 cut(s)	910, 1912
Hpy166II	GTNNAC	3 cut(s)	707, 959, 1864
Hpy8I	GTNNAC	3 cut(s)	707, 959, 1864
HpyAV	CCTTC	5 cut(s)	127, 310, 1029, 1157, 1948
HpyCH4III	ACNGT	3 cut(s)	1274, 1283, 1430
HpyCH4IV	ACGT	8 cut(s)	545, 575, 1191, 1301, 1653, 1741, 1771, 1796
HpySE526I	ACGT	8 cut(s)	545, 575, 1191, 1301, 1653, 1741, 1771, 1796
Hsp92I	GRCGYC	4 cut(s)	330, 690, 1191, 1653
Hsp92II	CATG	7 cut(s)	63, 115, 145, 802, 1473, 1852, 1894
HspAI	GCGC	9 cut(s)	362, 370, 375, 570, 1489, 1553, 1576, 1578, 1831
Ksp22I	TGATCA	1 cut(s)	171
LguI	GCTCTTC	4 cut(s)	213, 458, 1001, 1424
LmnI	GCTCC	9 cut(s)	50, 353, 1016, 1128, 1614, 1620, 1663, 1873, 1889
Lsp1109I	GCAGC	9 cut(s)	29, 32, 35, 38, 41, 323, 359, 1132, 1618
LweI	GCATC	3 cut(s)	501, 834, 1296
MaeI	CTAG	1 cut(s)	2034
MaeII	ACGT	8 cut(s)	545, 575, 1191, 1301, 1653, 1741, 1771, 1796
MaeIII	GTNAC	3 cut(s)	78, 916, 1217
MbiI	CCGCTC	2 cut(s)	1564, 1876
MflI	RGATCY	3 cut(s)	811, 1209, 1497
MhlI	GDGCHC	3 cut(s)	350, 1013, 1866
MluCI	AATT	4 cut(s)	213, 873, 1319, 1506
MlyI	GAGTC	5 cut(s)	548, 964, 1174, 1661, 1952
MmeI	TCCRAC	4 cut(s)	1080, 1294, 1377, 1911
Mph1103I	ATGCAT	1 cut(s)	849
MroXI	GAANNNNTTC	2 cut(s)	252, 467
MseI	TTAA	1 cut(s)	1322
MspA1I	CMGCKG	2 cut(s)	32, 1870
MspR9I	CCNGG	6 cut(s)	285, 742, 870, 1664, 1923, 1933
MteI	GCGCNGCGC	1 cut(s)	373
Mva1269I	GAATGC	1 cut(s)	1886
MvaI	CCWGG	3 cut(s)	742, 870, 1933
NciI	CCSGG	3 cut(s)	285, 1664, 1923
NcoI	CCATGG	1 cut(s)	1469
NlaIII	CATG	7 cut(s)	63, 115, 145, 802, 1473, 1852, 1894
NlaIV	GGNNCC	1 cut(s)	1482
NmeAIII	GCCGAG	1 cut(s)	1393
NmuCI	GTSAC	1 cut(s)	916
NruI	TCGCGA	1 cut(s)	1391
NsbI	TGCGCA	1 cut(s)	376
NsiI	ATGCAT	1 cut(s)	849
NspV	TTCGAA	1 cut(s)	303
PaeR7I	CTCGAG	1 cut(s)	1532
PauI	GCGCGC	1 cut(s)	1576
PceI	AGGCCT	2 cut(s)	720, 1085
PciSI	GCTCTTC	4 cut(s)	213, 458, 1001, 1424
PcsI	WCGNNNNNNNCGW	4 cut(s)	1197, 1200, 1266, 1650
PctI	GAATGC	1 cut(s)	1886
PdmI	GAANNNNTTC	2 cut(s)	252, 467
PfeI	GAWTC	7 cut(s)	476, 737, 1257, 1360, 1377, 1819, 2006
PfoI	TCCNGGA	1 cut(s)	868
PleI	GAGTC	5 cut(s)	548, 963, 1174, 1661, 1952
PmaCI	CACGTG	3 cut(s)	1742, 1772, 1797
PmlI	CACGTG	3 cut(s)	1742, 1772, 1797
PpsI	GAGTC	5 cut(s)	548, 963, 1174, 1661, 1952
Ppu21I	YACGTR	3 cut(s)	1742, 1772, 1797
PshAI	GACNNNNGTC	1 cut(s)	1428
PshBI	ATTAAT	1 cut(s)	1322
Psp124BI	GAGCTC	2 cut(s)	350, 1013
Psp6I	CCWGG	3 cut(s)	740, 868, 1931
PspCI	CACGTG	3 cut(s)	1742, 1772, 1797
PspEI	GGTNACC	1 cut(s)	78
PspFI	CCCAGC	1 cut(s)	41
PspGI	CCWGG	3 cut(s)	740, 868, 1931
PspN4I	GGNNCC	1 cut(s)	1482
PspPI	GGNCC	2 cut(s)	1372, 1684
PspXI	VCTCGAGB	1 cut(s)	1532
PstNI	CAGNNNCTG	1 cut(s)	32
PsuI	RGATCY	3 cut(s)	811, 1209, 1497
PteI	GCGCGC	1 cut(s)	1576
PvuII	CAGCTG	2 cut(s)	32, 1870
RruI	TCGCGA	1 cut(s)	1391
RsaI	GTAC	3 cut(s)	407, 863, 1169
RsaNI	GTAC	3 cut(s)	406, 862, 1168
Rsr2I	CGGWCCG	1 cut(s)	1372
RsrII	CGGWCCG	1 cut(s)	1372
SacI	GAGCTC	2 cut(s)	350, 1013
SapI	GCTCTTC	4 cut(s)	213, 458, 1001, 1424
SaqAI	TTAA	1 cut(s)	1322
Sau96I	GGNCC	2 cut(s)	1372, 1684
ScaI	AGTACT	1 cut(s)	407
SchI	GAGTC	5 cut(s)	548, 964, 1174, 1661, 1952
ScrFI	CCNGG	6 cut(s)	285, 742, 870, 1664, 1923, 1933
SduI	GDGCHC	3 cut(s)	350, 1013, 1866
SfaNI	GCATC	3 cut(s)	501, 834, 1296
Sfr274I	CTCGAG	1 cut(s)	1532
SfuI	TTCGAA	1 cut(s)	303
SgrAI	CRCCGGYG	1 cut(s)	692
SinI	GGWCC	2 cut(s)	1372, 1684
SlaI	CTCGAG	1 cut(s)	1532
SmlI	CTYRAG	5 cut(s)	343, 491, 1364, 1457, 1532
SmoI	CTYRAG	5 cut(s)	343, 491, 1364, 1457, 1532
Sse9I	AATT	4 cut(s)	213, 873, 1319, 1506
SseBI	AGGCCT	2 cut(s)	720, 1085
SspMI	CTAG	1 cut(s)	2034
SstI	GAGCTC	2 cut(s)	350, 1013
StuI	AGGCCT	2 cut(s)	720, 1085
StyD4I	CCNGG	6 cut(s)	283, 740, 868, 1662, 1921, 1931
StyI	CCWWGG	1 cut(s)	1469
TaaI	ACNGT	3 cut(s)	1274, 1283, 1430
TaiI	ACGT	8 cut(s)	548, 578, 1194, 1304, 1656, 1744, 1774, 1799
TaqII	GACCGA	4 cut(s)	413, 449, 1389, 1672
TasI	AATT	4 cut(s)	213, 873, 1319, 1506
TatI	WGTACW	2 cut(s)	405, 861
TauI	GCSGC	7 cut(s)	17, 291, 702, 1097, 1553, 1794, 1808
TfiI	GAWTC	7 cut(s)	476, 737, 1257, 1360, 1377, 1819, 2006
Tru1I	TTAA	1 cut(s)	1322
Tru9I	TTAA	1 cut(s)	1322
TscAI	CASTG	3 cut(s)	79, 263, 1815
TseFI	GTSAC	1 cut(s)	916
TseI	GCWGC	9 cut(s)	17, 20, 23, 26, 29, 311, 372, 1120, 1606
Tsp45I	GTSAC	1 cut(s)	916
TspDTI	ATGAA	2 cut(s)	815, 1907
TspGWI	ACGGA	1 cut(s)	1493
TspRI	CASTG	3 cut(s)	79, 263, 1815
VneI	GTGCAC	1 cut(s)	1862
VpaK11BI	GGWCC	2 cut(s)	1372, 1684
VspI	ATTAAT	1 cut(s)	1322
XapI	RAATTY	2 cut(s)	873, 1506
XcmI	CCANNNNNNNNNTGG	1 cut(s)	997
XhoI	CTCGAG	1 cut(s)	1532
XmnI	GAANNNNTTC	2 cut(s)	252, 467
XspI	CTAG	1 cut(s)	2034
ZraI	GACGTC	2 cut(s)	1192, 1654
ZrmI	AGTACT	1 cut(s)	407
Zsp2I	ATGCAT	1 cut(s)	849

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.