Rh2AG161200

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0006338
Physical Location & Seq
Reverse (-)
15229958 .. 15234412
4455 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG161200.1

Sequence Viewer

Length: 1923 bp
ATGTCCTTTCATCTTCACAAGTTTCCTCTCATGTCCAAAAGCCGAAAGCTTCACAACCTAATCACAGAGCAAGAGGCCAACCCATCACATCCCCAACAAGAGCTAGAAGAAGAGCCGGACGAAATTGAAGAAGTGCAGTGTCAAATAGTCCTCTCAGACTTCCCGGGCGGCTCCGAGACCTTCGAAATCGCCGCCAAATTCTGCTACGGCGTCAAAATCGACCTCAACTCGACCAATGTGGGACCTCTCCGCTGCGCCGGAGAGTATCTAGAAATGACAGAAGAGTATTCCGAAGACAACCTCATCTCAAAAACCGAAAGGTTCCTGTCTCAAGCCGTGTTCAAGAGCTTCAAAGAGTCCATCAAAGCTCTCAAATCCTGCGAGCGCGTCATGCCACTCGCAGAGACCCTAGGCATTACACAGAGGTGCATCGACTCCATCGCTAACAGAGCCACCAACGCCGATCCGAGCCTGTTCGGCTGGCCGGTCAATGAAGTCGCCCCGAACCCAAGTTCATCCAAACACCAGATTCTATGGAATGGGATTGACACAGGTGGAAGGAGAAAAGGGATGTCTAGAGCAAGCCATCCAGATTCTTGGCTCGAAGACTTGGTCCTCTTAAGCCTCCCTTTCTTCAAGCGATTGATTATGGCAATGAAAGACGGAAATCTCAGCCTGGAAATGGTGGAGACCTGTTTGATGTACTACGCCAAGAAATACATTCCCGGAATCTCAAGATCGACTCGAAAGTCCTCTTCTTCCACCACCACTTGTAGCTCCTCTTTAGCTTTGGAAAACCAACAGAGAGAACTATTGGAGACCATAATCTCAAACCTTCCATTGGAGAAAACACCAAGACCTCCAACCAATACAAGATTTCTATTTGGGCTGTTGAGAACAGCGAATATCTTAAACGCCTCGCAGGGATGTAAAGCCGCATTGGAGAAGAAGATTGGGTCGCAGCTCGAGCAAGCTAGCTTAGACGATCTGCTCATACCGAGCTATTCGTATCTGAATGAGACCCTATACGACGTCGATTGCGTGGAGAGGATTCTGGGGTATTTTTTGGACGGGTTGGAGCAGAGAAACAGAAACAGAGATGGAATTGAAGGTGGAGATGAAGACGAAGACCGTGATATAGAAGGTGCTAGATCGCCGGCGCTGATGCTTGTCGGGAAATTAACCGACGAGTATCTCTCCGAGATCGCATCGGATGCGAATTTGATGCCGGATAGATTCTACAACTTTGCCATGGCCCTGCCGGAGCAGGCGAGGCTGTTCGACGACGGGCTTTACAGAGCAGTTGATGTTTATCTAAAGGCTCATCCATGGATATCGGAACCGGAGCGGGAGAAGATCTGCGGGATACTAGACTCCCAGAAGCTCACACTCGAGGCGTGCACGCACGCCGCGCAGAACGAGCGGTTGCCGCTACGCGCCGTCGTGCAAGTCTTGTTCTTCGAGCAGCTTCAGCTCCGTCACGCGATCGCCGGTACCCTTATCGCCGGGGAGACCGCGCCGCCGGACTCCAGTCGGCCCTCGGTGTTGCGAAGAGAGGCGGAGACTGAGGAGGACGAGGAGCAGGAGGAGGAGGAGGAGGAGGAGGAAGGCGGTGCTGTGGAGGTACACGCGGAGGAAGGAGGAGGCGGCACGTGGAGGTCGGCTGTGAGGGAGAATCAGGTGCTGCGGTTGGATATGGATAGCATGAGGACACGGGTGCACCAACTTGAGCGGGAGTGTTCCAACATGAAGAAGGTGATCGAAAAGATTGACAACAAATCGGGTCAACCCAATGGACGGGCCGGATGGAAAGGCTCGTTGACCCGGCGGTTCGGGTGCAAGTTCAAGACCCAAGTGTGCGATTCGCACGAGCCGACGGTCGTGGACGGGCGGAAAGGGCGGCGCCACCAGCATCAACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

640

Amino Acids

72.14

Weight (kDa)

5.16

Isoelectric Point (pI)

56.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 198 - 467 1.2e-85 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 748
AatII GACGTC 1 cut(s) 1035
Acc65I GGTACC 1 cut(s) 1493
AccB1I GGYRCC 2 cut(s) 1493, 1902
AccBSI CCGCTC 3 cut(s) 1348, 1423, 1732
AccII CGCG 6 cut(s) 387, 1412, 1437, 1484, 1517, 1631
AclWI GGATC 1 cut(s) 458
AcoI YGGCCR 1 cut(s) 482
AcsI RAATTY 2 cut(s) 197, 1219
AcuI CTGAAG 1 cut(s) 1454
AcvI CACGTG 1 cut(s) 1653
AcyI GRCGYC 3 cut(s) 210, 1032, 1903
AfaI GTAC 3 cut(s) 704, 1495, 1626
AfiI CCNNNNNNNGG 3 cut(s) 682, 841, 1797
AflII CTTAAG 1 cut(s) 619
AgsI TTSAA 6 cut(s) 128, 343, 352, 637, 1109, 1846
AjnI CCWGG 1 cut(s) 675
AleI CACNNNNGTG 1 cut(s) 424
Alw21I GWGCWC 2 cut(s) 1403, 1722
Alw26I GTCTC 8 cut(s) 170, 333, 398, 683, 812, 1013, 1505, 1556
Alw44I GTGCAC 2 cut(s) 1399, 1718
AlwI GGATC 1 cut(s) 458
AlwNI CAGNNNCTG 1 cut(s) 1684
Ama87I CYCGRG 3 cut(s) 163, 965, 1391
AoxI GGCC 5 cut(s) 75, 482, 1254, 1535, 1800
ApaLI GTGCAC 2 cut(s) 1399, 1718
ApeKI GCWGC 4 cut(s) 252, 961, 1465, 1684
ApoI RAATTY 2 cut(s) 197, 1219
ArsI GACNNNNNNTTYG 2 cut(s) 597, 629
AsiSI GCGATCGC 1 cut(s) 1488
Asp718I GGTACC 1 cut(s) 1493
AspA2I CCTAGG 1 cut(s) 409
AspLEI GCGC 7 cut(s) 257, 387, 1162, 1414, 1439, 1519, 1905
AspS9I GGNCC 5 cut(s) 242, 613, 1255, 1536, 1800
AsuC2I CCSGG 5 cut(s) 164, 165, 726, 1507, 1825
AsuHPI GGTGA 1 cut(s) 1768
AsuII TTCGAA 1 cut(s) 183
AsuNHI GCTAGC 1 cut(s) 974
AvaI CYCGRG 3 cut(s) 163, 965, 1391
AvaII GGWCC 2 cut(s) 242, 613
AvrII CCTAGG 1 cut(s) 409
BaeGI GKGCMC 2 cut(s) 1403, 1722
BanI GGYRCC 2 cut(s) 1493, 1902
BauI CACGAG 1 cut(s) 1868
BbrPI CACGTG 1 cut(s) 1653
BbsI GAAGAC 4 cut(s) 300, 612, 1128, 1134
Bbv12I GWGCWC 2 cut(s) 1403, 1722
BbvI GCAGC 4 cut(s) 239, 973, 1477, 1671
BccI CCATC 6 cut(s) 91, 368, 446, 594, 1094, 1800
BceAI ACGGC 3 cut(s) 223, 320, 1424
BcgI CGANNNNNNTGC 2 cut(s) 1207, 1241
BciT130I CCWGG 1 cut(s) 677
BciVI GTATCC 1 cut(s) 1359
BcnI CCSGG 5 cut(s) 164, 165, 726, 1507, 1825
BcoDI GTCTC 8 cut(s) 170, 333, 398, 683, 812, 1013, 1505, 1556
BfaI CTAG 7 cut(s) 104, 269, 410, 576, 975, 1149, 1370
BfoI RGCGCY 2 cut(s) 1163, 1906
BfrI CTTAAG 1 cut(s) 619
BfuI GTATCC 1 cut(s) 1359
BglI GCCNNNNNGGC 1 cut(s) 477
BglII AGATCT 1 cut(s) 1356
BlnI CCTAGG 1 cut(s) 409
Bme1390I CCNGG 6 cut(s) 164, 165, 677, 726, 1507, 1825
Bme18I GGWCC 2 cut(s) 242, 613
BmeT110I CYCGRG 3 cut(s) 163, 965, 1391
BmgT120I GGNCC 5 cut(s) 242, 613, 1255, 1536, 1800
BmiI GGNNCC 6 cut(s) 172, 243, 323, 1341, 1495, 1904
BmrFI CCNGG 6 cut(s) 164, 165, 677, 726, 1507, 1825
BmsI GCATC 5 cut(s) 438, 1155, 1204, 1215, 1217
BmtI GCTAGC 1 cut(s) 978
BoxI GACNNNNGTC 1 cut(s) 1530
BpiI GAAGAC 4 cut(s) 300, 612, 1128, 1134
BplI GAGNNNNNCTC 2 cut(s) 1181, 1213
BpmI CTGGAG 1 cut(s) 1513
Bpu14I TTCGAA 1 cut(s) 183
BpuEI CTTGAG 3 cut(s) 315, 718, 1748
BpuMI CCSGG 5 cut(s) 164, 165, 726, 1507, 1825
BsaAI YACGTR 1 cut(s) 1653
BsaBI GATNNNNATC 1 cut(s) 1311
BsaHI GRCGYC 3 cut(s) 210, 1032, 1903
BsaI GGTCTC 6 cut(s) 170, 398, 683, 812, 1013, 1505
BsaJI CCNNGG 6 cut(s) 163, 409, 1251, 1328, 1506, 1539
BsaWI WCCGGW 1 cut(s) 1342
Bsc4I CCNNNNNNNGG 3 cut(s) 682, 841, 1797
Bse118I RCCGGY 3 cut(s) 484, 1156, 1490
Bse1I ACTGG 1 cut(s) 1530
Bse3DI GCAATG 1 cut(s) 660
Bse8I GATNNNNATC 1 cut(s) 1311
BseBI CCWGG 1 cut(s) 677
BseDI CCNNGG 6 cut(s) 163, 409, 1251, 1328, 1506, 1539
BseGI GGATG 8 cut(s) 88, 515, 576, 586, 932, 1219, 1324, 1811
BseJI GATNNNNATC 1 cut(s) 1311
BseLI CCNNNNNNNGG 3 cut(s) 682, 841, 1797
BseMI GCAATG 1 cut(s) 660
BseMII CTCAG 3 cut(s) 168, 685, 1557
BseNI ACTGG 1 cut(s) 1530
BseSI GKGCMC 2 cut(s) 1403, 1722
BseXI GCAGC 4 cut(s) 239, 973, 1477, 1671
BsgI GTGCAG 1 cut(s) 155
Bsh1236I CGCG 6 cut(s) 387, 1412, 1437, 1484, 1517, 1631
Bsh1285I CGRYCG 2 cut(s) 1488, 1881
BshFI GGCC 5 cut(s) 77, 484, 1256, 1537, 1802
BshNI GGYRCC 2 cut(s) 1493, 1902
BsiEI CGRYCG 2 cut(s) 1488, 1881
BsiHKAI GWGCWC 2 cut(s) 1403, 1722
BsiHKCI CYCGRG 3 cut(s) 163, 965, 1391
BslFI GGGAC 1 cut(s) 255
BslI CCNNNNNNNGG 3 cut(s) 682, 841, 1797
BsmAI GTCTC 8 cut(s) 170, 333, 398, 683, 812, 1013, 1505, 1556
BsmFI GGGAC 1 cut(s) 255
BsnI GGCC 5 cut(s) 77, 484, 1256, 1537, 1802
Bso31I GGTCTC 6 cut(s) 170, 398, 683, 812, 1013, 1505
BsoBI CYCGRG 3 cut(s) 163, 965, 1391
Bsp119I TTCGAA 1 cut(s) 183
Bsp1286I GDGCHC 2 cut(s) 1403, 1722
Bsp143I GATC 8 cut(s) 463, 737, 985, 1151, 1203, 1356, 1485, 1758
Bsp19I CCATGG 2 cut(s) 1251, 1328
BspANI GGCC 5 cut(s) 77, 484, 1256, 1537, 1802
BspCNI CTCAG 3 cut(s) 167, 684, 1558
BspFNI CGCG 6 cut(s) 387, 1412, 1437, 1484, 1517, 1631
BspLI GGNNCC 6 cut(s) 172, 243, 323, 1341, 1495, 1904
BspOI GCTAGC 1 cut(s) 978
BspPI GGATC 1 cut(s) 458
BspQI GCTCTTC 1 cut(s) 105
BspT104I TTCGAA 1 cut(s) 183
BspT107I GGYRCC 2 cut(s) 1493, 1902
BspTI CTTAAG 1 cut(s) 619
BspTNI GGTCTC 6 cut(s) 170, 398, 683, 812, 1013, 1505
BsrBI CCGCTC 3 cut(s) 1348, 1423, 1732
BsrDI GCAATG 1 cut(s) 660
BsrFI RCCGGY 3 cut(s) 484, 1156, 1490
BsrI ACTGG 1 cut(s) 1530
BssAI RCCGGY 3 cut(s) 484, 1156, 1490
BssECI CCNNGG 6 cut(s) 163, 409, 1251, 1328, 1506, 1539
BssMI GATC 8 cut(s) 463, 737, 985, 1151, 1203, 1356, 1485, 1758
BssNI GRCGYC 3 cut(s) 210, 1032, 1903
BssSI CACGAG 1 cut(s) 1868
BssT1I CCWWGG 3 cut(s) 409, 1251, 1328
Bst2BI CACGAG 1 cut(s) 1868
Bst2UI CCWGG 1 cut(s) 677
Bst4CI ACNGT 2 cut(s) 1133, 1879
Bst6I CTCTTC 4 cut(s) 105, 276, 760, 1546
BstACI GRCGYC 3 cut(s) 210, 1032, 1903
BstAFI CTTAAG 1 cut(s) 619
BstAPI GCANNNNNTGC 1 cut(s) 1214
BstBAI YACGTR 1 cut(s) 1653
BstBI TTCGAA 1 cut(s) 183
BstDEI CTNAG 4 cut(s) 154, 671, 979, 1566
BstDSI CCRYGG 2 cut(s) 1251, 1328
BstF5I GGATG 8 cut(s) 88, 515, 576, 586, 932, 1219, 1324, 1811
BstFNI CGCG 6 cut(s) 387, 1412, 1437, 1484, 1517, 1631
BstH2I RGCGCY 2 cut(s) 1163, 1906
BstHHI GCGC 7 cut(s) 257, 387, 1162, 1414, 1439, 1519, 1905
BstKTI GATC 8 cut(s) 466, 740, 988, 1154, 1206, 1359, 1488, 1761
BstMAI GTCTC 8 cut(s) 170, 333, 398, 683, 812, 1013, 1505, 1556
BstMBI GATC 8 cut(s) 463, 737, 985, 1151, 1203, 1356, 1485, 1758
BstMCI CGRYCG 2 cut(s) 1488, 1881
BstNI CCWGG 1 cut(s) 677
BstPAI GACNNNNGTC 1 cut(s) 1530
BstSCI CCNGG 6 cut(s) 162, 163, 675, 724, 1505, 1823
BstSLI GKGCMC 2 cut(s) 1403, 1722
BstUI CGCG 6 cut(s) 387, 1412, 1437, 1484, 1517, 1631
BstV1I GCAGC 4 cut(s) 239, 973, 1477, 1671
BstV2I GAAGAC 4 cut(s) 300, 612, 1128, 1134
BstX2I RGATCY 1 cut(s) 1356
BstXI CCANNNNNNTGG 1 cut(s) 597
BstYI RGATCY 1 cut(s) 1356
BsuI GTATCC 1 cut(s) 1359
BsuRI GGCC 5 cut(s) 77, 484, 1256, 1537, 1802
BtgI CCRYGG 2 cut(s) 1251, 1328
BtgZI GCGATG 1 cut(s) 424
BtsCI GGATG 8 cut(s) 88, 515, 576, 586, 932, 1219, 1324, 1811
BtsI GCAGTG 1 cut(s) 143
BtsIMutI CAGTG 1 cut(s) 143
CaiI CAGNNNCTG 1 cut(s) 1684
CfoI GCGC 7 cut(s) 257, 387, 1162, 1414, 1439, 1519, 1905
Cfr10I RCCGGY 3 cut(s) 484, 1156, 1490
Cfr13I GGNCC 5 cut(s) 242, 613, 1255, 1536, 1800
Cfr9I CCCGGG 1 cut(s) 163
CseI GACGC 2 cut(s) 199, 376
Csp6I GTAC 3 cut(s) 703, 1494, 1625
CviAII CATG 6 cut(s) 31, 391, 1252, 1329, 1705, 1747
CviQI GTAC 3 cut(s) 703, 1494, 1625
DdeI CTNAG 4 cut(s) 154, 671, 979, 1566
DinI GGCGCC 1 cut(s) 1904
DpnI GATC 8 cut(s) 465, 739, 987, 1153, 1205, 1358, 1487, 1760
DpnII GATC 8 cut(s) 463, 737, 985, 1151, 1203, 1356, 1485, 1758
DrdI GACNNNNNNGTC 1 cut(s) 748
DseDI GACNNNNNNGTC 1 cut(s) 748
EaeI YGGCCR 1 cut(s) 482
Eam1104I CTCTTC 4 cut(s) 105, 276, 760, 1546
EarI CTCTTC 4 cut(s) 105, 276, 760, 1546
EciI GGCGGA 2 cut(s) 1574, 1906
Eco130I CCWWGG 3 cut(s) 409, 1251, 1328
Eco31I GGTCTC 6 cut(s) 170, 398, 683, 812, 1013, 1505
Eco32I GATATC 1 cut(s) 1335
Eco47I GGWCC 2 cut(s) 242, 613
Eco57I CTGAAG 1 cut(s) 1454
Eco72I CACGTG 1 cut(s) 1653
Eco88I CYCGRG 3 cut(s) 163, 965, 1391
EcoO109I RGGNCCY 1 cut(s) 242
EcoRII CCWGG 1 cut(s) 675
EcoRV GATATC 1 cut(s) 1335
EcoT14I CCWWGG 3 cut(s) 409, 1251, 1328
EgeI GGCGCC 1 cut(s) 1904
EheI GGCGCC 1 cut(s) 1904
ErhI CCWWGG 3 cut(s) 409, 1251, 1328
FaeI CATG 6 cut(s) 34, 394, 1255, 1332, 1708, 1750
FalI AAGNNNNNCTT 2 cut(s) 613, 645
FaqI GGGAC 1 cut(s) 255
FatI CATG 6 cut(s) 30, 390, 1251, 1328, 1704, 1746
FauI CCCGC 3 cut(s) 1341, 1355, 1725
FokI GGATG 8 cut(s) 75, 502, 573, 583, 939, 1226, 1311, 1818
FspBI CTAG 7 cut(s) 104, 269, 410, 576, 975, 1149, 1370
GlaI GCGC 7 cut(s) 256, 386, 1161, 1413, 1438, 1518, 1904
GsuI CTGGAG 1 cut(s) 1513
HaeII RGCGCY 2 cut(s) 1163, 1906
HaeIII GGCC 5 cut(s) 77, 484, 1256, 1537, 1802
HgaI GACGC 2 cut(s) 199, 376
HhaI GCGC 7 cut(s) 257, 387, 1162, 1414, 1439, 1519, 1905
Hin1I GRCGYC 3 cut(s) 210, 1032, 1903
Hin1II CATG 6 cut(s) 34, 394, 1255, 1332, 1708, 1750
Hin6I GCGC 7 cut(s) 255, 385, 1160, 1412, 1437, 1517, 1903
HinP1I GCGC 7 cut(s) 255, 385, 1160, 1412, 1437, 1517, 1903
HincII GTYRAC 2 cut(s) 1787, 1821
HindII GTYRAC 2 cut(s) 1787, 1821
HindIII AAGCTT 1 cut(s) 47
HphI GGTGA 1 cut(s) 1768
Hpy166II GTNNAC 6 cut(s) 1401, 1627, 1720, 1787, 1821, 1885
Hpy188I TCNGA 8 cut(s) 157, 175, 292, 468, 1014, 1201, 1213, 1339
Hpy188III TCNNGA 7 cut(s) 269, 343, 576, 590, 735, 1174, 1846
Hpy8I GTNNAC 6 cut(s) 1401, 1627, 1720, 1787, 1821, 1885
Hpy99I CGWCG 7 cut(s) 1034, 1037, 1190, 1286, 1289, 1445, 1879
HpyAV CCTTC 8 cut(s) 190, 552, 845, 1103, 1136, 1601, 1631, 1747
HpyCH4III ACNGT 2 cut(s) 1133, 1879
HpyCH4IV ACGT 2 cut(s) 1032, 1652
HpyCH4V TGCA 6 cut(s) 136, 429, 1401, 1447, 1720, 1839
HpyF3I CTNAG 4 cut(s) 154, 671, 979, 1566
HpySE526I ACGT 2 cut(s) 1032, 1652
Hsp92I GRCGYC 3 cut(s) 210, 1032, 1903
Hsp92II CATG 6 cut(s) 34, 394, 1255, 1332, 1708, 1750
HspAI GCGC 7 cut(s) 255, 385, 1160, 1412, 1437, 1517, 1903
KasI GGCGCC 1 cut(s) 1902
KpnI GGTACC 1 cut(s) 1497
KroI GCCGGC 1 cut(s) 1156
KroNI GCCGGC 1 cut(s) 1158
Kzo9I GATC 8 cut(s) 463, 737, 985, 1151, 1203, 1356, 1485, 1758
LguI GCTCTTC 1 cut(s) 105
LmnI GCTCC 7 cut(s) 176, 782, 1078, 1264, 1345, 1479, 1579
Lsp1109I GCAGC 4 cut(s) 239, 973, 1477, 1671
LweI GCATC 5 cut(s) 438, 1155, 1204, 1215, 1217
MaeI CTAG 7 cut(s) 104, 269, 410, 576, 975, 1149, 1370
MaeII ACGT 2 cut(s) 1032, 1652
MaeIII GTNAC 1 cut(s) 1478
MalI GATC 8 cut(s) 465, 739, 987, 1153, 1205, 1358, 1487, 1760
MbiI CCGCTC 3 cut(s) 1348, 1423, 1732
MboI GATC 8 cut(s) 463, 737, 985, 1151, 1203, 1356, 1485, 1758
MflI RGATCY 1 cut(s) 1356
MhlI GDGCHC 2 cut(s) 1403, 1722
MluCI AATT 5 cut(s) 123, 197, 1104, 1178, 1219
Mly113I GGCGCC 1 cut(s) 1903
MlyI GAGTC 5 cut(s) 365, 428, 736, 1367, 1520
MmeI TCCRAC 4 cut(s) 887, 1056, 1671, 1767
MreI CGCCGGCG 1 cut(s) 1156
MroNI GCCGGC 1 cut(s) 1156
MseI TTAA 3 cut(s) 620, 911, 1181
MslI CAYNNNNRTG 1 cut(s) 424
MspA1I CMGCKG 1 cut(s) 252
MspCI CTTAAG 1 cut(s) 619
MspR9I CCNGG 6 cut(s) 164, 165, 677, 726, 1507, 1825
MvaI CCWGG 1 cut(s) 677
MvnI CGCG 6 cut(s) 387, 1412, 1437, 1484, 1517, 1631
NaeI GCCGGC 1 cut(s) 1158
NarI GGCGCC 1 cut(s) 1903
NciI CCSGG 5 cut(s) 164, 165, 726, 1507, 1825
NcoI CCATGG 2 cut(s) 1251, 1328
NdeII GATC 8 cut(s) 463, 737, 985, 1151, 1203, 1356, 1485, 1758
NgoMIV GCCGGC 1 cut(s) 1156
NheI GCTAGC 1 cut(s) 974
NlaIII CATG 6 cut(s) 34, 394, 1255, 1332, 1708, 1750
NlaIV GGNNCC 6 cut(s) 172, 243, 323, 1341, 1495, 1904
NmuCI GTSAC 1 cut(s) 1478
NspV TTCGAA 1 cut(s) 183
OliI CACNNNNGTG 1 cut(s) 424
PaeR7I CTCGAG 2 cut(s) 965, 1391
PciSI GCTCTTC 1 cut(s) 105
PcsI WCGNNNNNNNCGW 2 cut(s) 1038, 1871
PdiI GCCGGC 1 cut(s) 1158
PfeI GAWTC 7 cut(s) 529, 593, 729, 1051, 1236, 1675, 1862
PflFI GACNNNGTC 1 cut(s) 611
PfoI TCCNGGA 1 cut(s) 724
Ple19I CGATCG 1 cut(s) 1488
PleI GAGTC 5 cut(s) 364, 428, 736, 1367, 1520
PluTI GGCGCC 1 cut(s) 1906
PmaCI CACGTG 1 cut(s) 1653
PmlI CACGTG 1 cut(s) 1653
PpsI GAGTC 5 cut(s) 364, 428, 736, 1367, 1520
Ppu21I YACGTR 1 cut(s) 1653
PpuMI RGGWCCY 1 cut(s) 242
PshAI GACNNNNGTC 1 cut(s) 1530
Psp5II RGGWCCY 1 cut(s) 242
Psp6I CCWGG 1 cut(s) 675
PspCI CACGTG 1 cut(s) 1653
PspGI CCWGG 1 cut(s) 675
PspN4I GGNNCC 6 cut(s) 172, 243, 323, 1341, 1495, 1904
PspPI GGNCC 5 cut(s) 242, 613, 1255, 1536, 1800
PspPPI RGGWCCY 1 cut(s) 242
PspXI VCTCGAGB 2 cut(s) 965, 1391
PstNI CAGNNNCTG 1 cut(s) 1684
PsuI RGATCY 1 cut(s) 1356
PsyI GACNNNGTC 1 cut(s) 611
PvuI CGATCG 1 cut(s) 1488
RgaI GCGATCGC 1 cut(s) 1488
RsaI GTAC 3 cut(s) 704, 1495, 1626
RsaNI GTAC 3 cut(s) 703, 1494, 1625
RseI CAYNNNNRTG 1 cut(s) 424
SapI GCTCTTC 1 cut(s) 105
SaqAI TTAA 3 cut(s) 620, 911, 1181
Sau3AI GATC 8 cut(s) 463, 737, 985, 1151, 1203, 1356, 1485, 1758
Sau96I GGNCC 5 cut(s) 242, 613, 1255, 1536, 1800
SchI GAGTC 5 cut(s) 365, 428, 736, 1367, 1520
ScrFI CCNGG 6 cut(s) 164, 165, 677, 726, 1507, 1825
SduI GDGCHC 2 cut(s) 1403, 1722
SfaAI GCGATCGC 1 cut(s) 1488
SfaNI GCATC 5 cut(s) 438, 1155, 1204, 1215, 1217
SfoI GGCGCC 1 cut(s) 1904
Sfr274I CTCGAG 2 cut(s) 965, 1391
SfuI TTCGAA 1 cut(s) 183
SgfI GCGATCGC 1 cut(s) 1488
SgrAI CRCCGGYG 1 cut(s) 1156
SinI GGWCC 2 cut(s) 242, 613
SlaI CTCGAG 2 cut(s) 965, 1391
SmaI CCCGGG 1 cut(s) 165
SmiMI CAYNNNNRTG 1 cut(s) 424
SmlI CTYRAG 6 cut(s) 330, 619, 733, 965, 1391, 1727
SmoI CTYRAG 6 cut(s) 330, 619, 733, 965, 1391, 1727
Sse9I AATT 5 cut(s) 123, 197, 1104, 1178, 1219
SspDI GGCGCC 1 cut(s) 1902
SspMI CTAG 7 cut(s) 104, 269, 410, 576, 975, 1149, 1370
StyD4I CCNGG 6 cut(s) 162, 163, 675, 724, 1505, 1823
StyI CCWWGG 3 cut(s) 409, 1251, 1328
TaaI ACNGT 2 cut(s) 1133, 1879
TaiI ACGT 2 cut(s) 1035, 1655
TasI AATT 5 cut(s) 123, 197, 1104, 1178, 1219
TatI WGTACW 1 cut(s) 702
TauI GCSGC 8 cut(s) 171, 194, 938, 1412, 1432, 1522, 1650, 1903
TfiI GAWTC 7 cut(s) 529, 593, 729, 1051, 1236, 1675, 1862
Tru1I TTAA 3 cut(s) 620, 911, 1181
Tru9I TTAA 3 cut(s) 620, 911, 1181
TscAI CASTG 1 cut(s) 143
TseFI GTSAC 1 cut(s) 1478
TseI GCWGC 4 cut(s) 252, 961, 1465, 1684
Tsp45I GTSAC 1 cut(s) 1478
TspDTI ATGAA 5 cut(s) 504, 507, 671, 1134, 1763
TspGWI ACGGA 2 cut(s) 678, 1466
TspMI CCCGGG 1 cut(s) 163
TspRI CASTG 1 cut(s) 143
Tth111I GACNNNGTC 1 cut(s) 611
Vha464I CTTAAG 1 cut(s) 619
VneI GTGCAC 2 cut(s) 1399, 1718
VpaK11BI GGWCC 2 cut(s) 242, 613
XapI RAATTY 2 cut(s) 197, 1219
XbaI TCTAGA 2 cut(s) 268, 575
XhoI CTCGAG 2 cut(s) 965, 1391
XmaI CCCGGG 1 cut(s) 163
XmaJI CCTAGG 1 cut(s) 409
XspI CTAG 7 cut(s) 104, 269, 410, 576, 975, 1149, 1370
ZraI GACGTC 1 cut(s) 1033
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.