Rh2BG168000

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0006338
Physical Location & Seq
Reverse (-)
14830058 .. 14833253
3196 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG168000.1

Sequence Viewer

Length: 1914 bp
ATGATTGCTCAGTTTCCTCTCATGTCCAAAAGCCGAAAGCTTCACAACCTAATCACAGAGCAAGAGGCCAACCCATCACATCCCCAACAAGAGCTAGAAGAAGAGCCGGACGAAATTGAAGAAGTGCAGTGTCAAATAGTCCTCTCAGACTTCCCGGGCGGCTCCGAGACCTTCGAAATCGCCGCCAAATTCTGCTACGGCGTCAAAATCGACCTCAACTCGACCAATGTGGGACCTCTCCGCTGCGCCGGAGAGTATCTAGAAATGACAGAAGAGTATTCCGAAGACAACCTCATCTCAAAAACCGAAAGGTTCCTGTCTCAAGCCGTGTTCAAGAGCTTCAAAGAGTCCATCAAAGCTCTCAAATCCTGCGAGCGCGTCATGCCACTCGCAGAGACCCTAGGCATTACACAGAGGTGCATCGACTCCATCGCTAACAGAGCCACCAACGCCGATCCGAGCCTGTTCGGCTGGCCGGTCAATGAAGTCGCCCCGAACCCAAGTTCATCCAAACACCAGATTCTATGGAATGGGATTGACACAGGTGGAAGGAGAAAAGGGATGTCTAGAGCAAGCCATCCAGATTCTTGGCTCGAAGACTTGGTCCTCTTAAGCCTCCCTTTCTTCAAGCGATTGATTATGGCAATGAAAGACGGAAATCTCAGCCTGGAAATGGTGGAGACCTGTTTGATGTACTACGCCAAGAAATACATTCCCGGAATCTCAAGATCGACTCGAAAGTCCTCTTCTTCCACCACCACTTGTAGCTCCTCTTTAGCTTTGGAAAACCAACAGAGAGAACTATTGGAGACCATAATCTCAAACCTTCCATTGGAGAAAACACCAAGACCTCCAACCAATACAAGATTTCTATTTGGGCTGTTGAGAACAGCGAATATCTTAAACGCCTCGCAGGGATGTAAAGCCGCATTGGAGAAGAAGATTGGGTCGCAGCTCGAGCAAGCTAGCTTAGACGATCTGCTCATACCGAGCTATTCGTATCTGAATGAGACCCTATACGACGTCGATTGCGTGGAGAGGATTCTGGGGTATTTTTTGGACGGGTTGGAGCAGAGAAACAGAAACAGAGATGGAATTGAAGGTGGAGATGAAGACGAAGACCGTGATATAGAAGGTGCTAGATCGCCGGCGCTGATGCTTGTCGGGAAATTAACCGACGAGTATCTCTCCGAGATCGCATCGGATGCGAATTTGATGCCGGATAGATTCTACAACTTTGCCATGGCCCTGCCGGAGCAGGCGAGGCTGTTCGACGACGGGCTTTACAGAGCAGTTGATGTTTATCTAAAGGCTCATCCATGGATATCGGAACCGGAGCGGGAGAAGATCTGCGGGATACTAGACTCCCAGAAGCTCACACTCGAGGCGTGCACGCACGCCGCGCAGAACGAGCGGTTGCCGCTACGCGCCGTCGTGCAAGTCTTGTTCTTCGAGCAGCTTCAGCTCCGTCACGCGATCGCCGGTACCCTTATCGCCGGGGAGACCGCGCCGCCGGACTCCAGTCGGCCCTCGGTGTTGCGAAGAGAGGCGGAGACTGAGGAGGACGAGGAGCAGGAGGAGGAGGAGGAGGAGGAGGAAGGCGGTGCTGTGGAGGTACACGCGGAGGAAGGAGGAGGCGGCACGTGGAGGTCGGCTGTGAGGGAGAATCAGGTGCTGCGGTTGGATATGGATAGCATGAGGACACGGGTGCACCAACTTGAGCGGGAGTGTTCCAACATGAAGAAGGTGATCGAAAAGATTGACAACAAATCGGGTCAACCCAATGGACGGGCCGGATGGAAAGGCTCGTTGACCCGGCGGTTCGGGTGCAAGTTCAAGACCCAAGTGTGCGATTCGCACGAGCCGACGGTCGTGGACGGGCGGAAAGGGCGGCGCCACCAGCATCAACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

637

Amino Acids

71.7

Weight (kDa)

5.07

Isoelectric Point (pI)

55.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 195 - 464 1.2e-85 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 739
AatII GACGTC 1 cut(s) 1026
Acc65I GGTACC 1 cut(s) 1484
AccB1I GGYRCC 2 cut(s) 1484, 1893
AccBSI CCGCTC 3 cut(s) 1339, 1414, 1723
AccII CGCG 6 cut(s) 378, 1403, 1428, 1475, 1508, 1622
AclWI GGATC 1 cut(s) 449
AcoI YGGCCR 1 cut(s) 473
AcsI RAATTY 2 cut(s) 188, 1210
AcuI CTGAAG 1 cut(s) 1445
AcvI CACGTG 1 cut(s) 1644
AcyI GRCGYC 3 cut(s) 201, 1023, 1894
AfaI GTAC 3 cut(s) 695, 1486, 1617
AfiI CCNNNNNNNGG 3 cut(s) 673, 832, 1788
AflII CTTAAG 1 cut(s) 610
AgsI TTSAA 6 cut(s) 119, 334, 343, 628, 1100, 1837
AjnI CCWGG 1 cut(s) 666
AleI CACNNNNGTG 1 cut(s) 415
Alw21I GWGCWC 2 cut(s) 1394, 1713
Alw26I GTCTC 8 cut(s) 161, 324, 389, 674, 803, 1004, 1496, 1547
Alw44I GTGCAC 2 cut(s) 1390, 1709
AlwI GGATC 1 cut(s) 449
AlwNI CAGNNNCTG 1 cut(s) 1675
Ama87I CYCGRG 3 cut(s) 154, 956, 1382
AoxI GGCC 5 cut(s) 66, 473, 1245, 1526, 1791
ApaLI GTGCAC 2 cut(s) 1390, 1709
ApeKI GCWGC 4 cut(s) 243, 952, 1456, 1675
ApoI RAATTY 2 cut(s) 188, 1210
ArsI GACNNNNNNTTYG 2 cut(s) 588, 620
AsiSI GCGATCGC 1 cut(s) 1479
Asp718I GGTACC 1 cut(s) 1484
AspA2I CCTAGG 1 cut(s) 400
AspLEI GCGC 7 cut(s) 248, 378, 1153, 1405, 1430, 1510, 1896
AspS9I GGNCC 5 cut(s) 233, 604, 1246, 1527, 1791
AsuC2I CCSGG 5 cut(s) 155, 156, 717, 1498, 1816
AsuHPI GGTGA 1 cut(s) 1759
AsuII TTCGAA 1 cut(s) 174
AsuNHI GCTAGC 1 cut(s) 965
AvaI CYCGRG 3 cut(s) 154, 956, 1382
AvaII GGWCC 2 cut(s) 233, 604
AvrII CCTAGG 1 cut(s) 400
BaeGI GKGCMC 2 cut(s) 1394, 1713
BanI GGYRCC 2 cut(s) 1484, 1893
BauI CACGAG 1 cut(s) 1859
BbrPI CACGTG 1 cut(s) 1644
BbsI GAAGAC 4 cut(s) 291, 603, 1119, 1125
Bbv12I GWGCWC 2 cut(s) 1394, 1713
BbvI GCAGC 4 cut(s) 230, 964, 1468, 1662
BccI CCATC 6 cut(s) 82, 359, 437, 585, 1085, 1791
BceAI ACGGC 3 cut(s) 214, 311, 1415
BcgI CGANNNNNNTGC 2 cut(s) 1198, 1232
BciT130I CCWGG 1 cut(s) 668
BciVI GTATCC 1 cut(s) 1350
BcnI CCSGG 5 cut(s) 155, 156, 717, 1498, 1816
BcoDI GTCTC 8 cut(s) 161, 324, 389, 674, 803, 1004, 1496, 1547
BfaI CTAG 7 cut(s) 95, 260, 401, 567, 966, 1140, 1361
BfoI RGCGCY 2 cut(s) 1154, 1897
BfrI CTTAAG 1 cut(s) 610
BfuI GTATCC 1 cut(s) 1350
BglI GCCNNNNNGGC 1 cut(s) 468
BglII AGATCT 1 cut(s) 1347
BlnI CCTAGG 1 cut(s) 400
Bme1390I CCNGG 6 cut(s) 155, 156, 668, 717, 1498, 1816
Bme18I GGWCC 2 cut(s) 233, 604
BmeT110I CYCGRG 3 cut(s) 154, 956, 1382
BmgT120I GGNCC 5 cut(s) 233, 604, 1246, 1527, 1791
BmiI GGNNCC 6 cut(s) 163, 234, 314, 1332, 1486, 1895
BmrFI CCNGG 6 cut(s) 155, 156, 668, 717, 1498, 1816
BmsI GCATC 5 cut(s) 429, 1146, 1195, 1206, 1208
BmtI GCTAGC 1 cut(s) 969
BoxI GACNNNNGTC 1 cut(s) 1521
BpiI GAAGAC 4 cut(s) 291, 603, 1119, 1125
BplI GAGNNNNNCTC 2 cut(s) 1172, 1204
BpmI CTGGAG 1 cut(s) 1504
Bpu14I TTCGAA 1 cut(s) 174
BpuEI CTTGAG 3 cut(s) 306, 709, 1739
BpuMI CCSGG 5 cut(s) 155, 156, 717, 1498, 1816
BsaAI YACGTR 1 cut(s) 1644
BsaBI GATNNNNATC 1 cut(s) 1302
BsaHI GRCGYC 3 cut(s) 201, 1023, 1894
BsaI GGTCTC 6 cut(s) 161, 389, 674, 803, 1004, 1496
BsaJI CCNNGG 6 cut(s) 154, 400, 1242, 1319, 1497, 1530
BsaWI WCCGGW 1 cut(s) 1333
Bsc4I CCNNNNNNNGG 3 cut(s) 673, 832, 1788
Bse118I RCCGGY 3 cut(s) 475, 1147, 1481
Bse1I ACTGG 1 cut(s) 1521
Bse3DI GCAATG 1 cut(s) 651
Bse8I GATNNNNATC 1 cut(s) 1302
BseBI CCWGG 1 cut(s) 668
BseDI CCNNGG 6 cut(s) 154, 400, 1242, 1319, 1497, 1530
BseGI GGATG 8 cut(s) 79, 506, 567, 577, 923, 1210, 1315, 1802
BseJI GATNNNNATC 1 cut(s) 1302
BseLI CCNNNNNNNGG 3 cut(s) 673, 832, 1788
BseMI GCAATG 1 cut(s) 651
BseMII CTCAG 4 cut(s) 23, 159, 676, 1548
BseNI ACTGG 1 cut(s) 1521
BseSI GKGCMC 2 cut(s) 1394, 1713
BseXI GCAGC 4 cut(s) 230, 964, 1468, 1662
BsgI GTGCAG 1 cut(s) 146
Bsh1236I CGCG 6 cut(s) 378, 1403, 1428, 1475, 1508, 1622
Bsh1285I CGRYCG 2 cut(s) 1479, 1872
BshFI GGCC 5 cut(s) 68, 475, 1247, 1528, 1793
BshNI GGYRCC 2 cut(s) 1484, 1893
BsiEI CGRYCG 2 cut(s) 1479, 1872
BsiHKAI GWGCWC 2 cut(s) 1394, 1713
BsiHKCI CYCGRG 3 cut(s) 154, 956, 1382
BslFI GGGAC 1 cut(s) 246
BslI CCNNNNNNNGG 3 cut(s) 673, 832, 1788
BsmAI GTCTC 8 cut(s) 161, 324, 389, 674, 803, 1004, 1496, 1547
BsmFI GGGAC 1 cut(s) 246
BsnI GGCC 5 cut(s) 68, 475, 1247, 1528, 1793
Bso31I GGTCTC 6 cut(s) 161, 389, 674, 803, 1004, 1496
BsoBI CYCGRG 3 cut(s) 154, 956, 1382
Bsp119I TTCGAA 1 cut(s) 174
Bsp1286I GDGCHC 2 cut(s) 1394, 1713
Bsp143I GATC 8 cut(s) 454, 728, 976, 1142, 1194, 1347, 1476, 1749
Bsp19I CCATGG 2 cut(s) 1242, 1319
BspANI GGCC 5 cut(s) 68, 475, 1247, 1528, 1793
BspCNI CTCAG 4 cut(s) 22, 158, 675, 1549
BspFNI CGCG 6 cut(s) 378, 1403, 1428, 1475, 1508, 1622
BspLI GGNNCC 6 cut(s) 163, 234, 314, 1332, 1486, 1895
BspOI GCTAGC 1 cut(s) 969
BspPI GGATC 1 cut(s) 449
BspQI GCTCTTC 1 cut(s) 96
BspT104I TTCGAA 1 cut(s) 174
BspT107I GGYRCC 2 cut(s) 1484, 1893
BspTI CTTAAG 1 cut(s) 610
BspTNI GGTCTC 6 cut(s) 161, 389, 674, 803, 1004, 1496
BsrBI CCGCTC 3 cut(s) 1339, 1414, 1723
BsrDI GCAATG 1 cut(s) 651
BsrFI RCCGGY 3 cut(s) 475, 1147, 1481
BsrI ACTGG 1 cut(s) 1521
BssAI RCCGGY 3 cut(s) 475, 1147, 1481
BssECI CCNNGG 6 cut(s) 154, 400, 1242, 1319, 1497, 1530
BssMI GATC 8 cut(s) 454, 728, 976, 1142, 1194, 1347, 1476, 1749
BssNI GRCGYC 3 cut(s) 201, 1023, 1894
BssSI CACGAG 1 cut(s) 1859
BssT1I CCWWGG 3 cut(s) 400, 1242, 1319
Bst2BI CACGAG 1 cut(s) 1859
Bst2UI CCWGG 1 cut(s) 668
Bst4CI ACNGT 2 cut(s) 1124, 1870
Bst6I CTCTTC 4 cut(s) 96, 267, 751, 1537
BstACI GRCGYC 3 cut(s) 201, 1023, 1894
BstAFI CTTAAG 1 cut(s) 610
BstAPI GCANNNNNTGC 1 cut(s) 1205
BstBAI YACGTR 1 cut(s) 1644
BstBI TTCGAA 1 cut(s) 174
BstDEI CTNAG 5 cut(s) 9, 145, 662, 970, 1557
BstDSI CCRYGG 2 cut(s) 1242, 1319
BstF5I GGATG 8 cut(s) 79, 506, 567, 577, 923, 1210, 1315, 1802
BstFNI CGCG 6 cut(s) 378, 1403, 1428, 1475, 1508, 1622
BstH2I RGCGCY 2 cut(s) 1154, 1897
BstHHI GCGC 7 cut(s) 248, 378, 1153, 1405, 1430, 1510, 1896
BstKTI GATC 8 cut(s) 457, 731, 979, 1145, 1197, 1350, 1479, 1752
BstMAI GTCTC 8 cut(s) 161, 324, 389, 674, 803, 1004, 1496, 1547
BstMBI GATC 8 cut(s) 454, 728, 976, 1142, 1194, 1347, 1476, 1749
BstMCI CGRYCG 2 cut(s) 1479, 1872
BstNI CCWGG 1 cut(s) 668
BstPAI GACNNNNGTC 1 cut(s) 1521
BstSCI CCNGG 6 cut(s) 153, 154, 666, 715, 1496, 1814
BstSLI GKGCMC 2 cut(s) 1394, 1713
BstUI CGCG 6 cut(s) 378, 1403, 1428, 1475, 1508, 1622
BstV1I GCAGC 4 cut(s) 230, 964, 1468, 1662
BstV2I GAAGAC 4 cut(s) 291, 603, 1119, 1125
BstX2I RGATCY 1 cut(s) 1347
BstXI CCANNNNNNTGG 1 cut(s) 588
BstYI RGATCY 1 cut(s) 1347
BsuI GTATCC 1 cut(s) 1350
BsuRI GGCC 5 cut(s) 68, 475, 1247, 1528, 1793
BtgI CCRYGG 2 cut(s) 1242, 1319
BtgZI GCGATG 1 cut(s) 415
BtsCI GGATG 8 cut(s) 79, 506, 567, 577, 923, 1210, 1315, 1802
BtsI GCAGTG 1 cut(s) 134
BtsIMutI CAGTG 1 cut(s) 134
CaiI CAGNNNCTG 1 cut(s) 1675
CfoI GCGC 7 cut(s) 248, 378, 1153, 1405, 1430, 1510, 1896
Cfr10I RCCGGY 3 cut(s) 475, 1147, 1481
Cfr13I GGNCC 5 cut(s) 233, 604, 1246, 1527, 1791
Cfr9I CCCGGG 1 cut(s) 154
CseI GACGC 2 cut(s) 190, 367
Csp6I GTAC 3 cut(s) 694, 1485, 1616
CviAII CATG 6 cut(s) 22, 382, 1243, 1320, 1696, 1738
CviQI GTAC 3 cut(s) 694, 1485, 1616
DdeI CTNAG 5 cut(s) 9, 145, 662, 970, 1557
DinI GGCGCC 1 cut(s) 1895
DpnI GATC 8 cut(s) 456, 730, 978, 1144, 1196, 1349, 1478, 1751
DpnII GATC 8 cut(s) 454, 728, 976, 1142, 1194, 1347, 1476, 1749
DrdI GACNNNNNNGTC 1 cut(s) 739
DseDI GACNNNNNNGTC 1 cut(s) 739
EaeI YGGCCR 1 cut(s) 473
Eam1104I CTCTTC 4 cut(s) 96, 267, 751, 1537
EarI CTCTTC 4 cut(s) 96, 267, 751, 1537
EciI GGCGGA 2 cut(s) 1565, 1897
Eco130I CCWWGG 3 cut(s) 400, 1242, 1319
Eco31I GGTCTC 6 cut(s) 161, 389, 674, 803, 1004, 1496
Eco32I GATATC 1 cut(s) 1326
Eco47I GGWCC 2 cut(s) 233, 604
Eco57I CTGAAG 1 cut(s) 1445
Eco72I CACGTG 1 cut(s) 1644
Eco88I CYCGRG 3 cut(s) 154, 956, 1382
EcoO109I RGGNCCY 1 cut(s) 233
EcoRII CCWGG 1 cut(s) 666
EcoRV GATATC 1 cut(s) 1326
EcoT14I CCWWGG 3 cut(s) 400, 1242, 1319
EgeI GGCGCC 1 cut(s) 1895
EheI GGCGCC 1 cut(s) 1895
ErhI CCWWGG 3 cut(s) 400, 1242, 1319
FaeI CATG 6 cut(s) 25, 385, 1246, 1323, 1699, 1741
FalI AAGNNNNNCTT 2 cut(s) 604, 636
FaqI GGGAC 1 cut(s) 246
FatI CATG 6 cut(s) 21, 381, 1242, 1319, 1695, 1737
FauI CCCGC 3 cut(s) 1332, 1346, 1716
FokI GGATG 8 cut(s) 66, 493, 564, 574, 930, 1217, 1302, 1809
FspBI CTAG 7 cut(s) 95, 260, 401, 567, 966, 1140, 1361
GlaI GCGC 7 cut(s) 247, 377, 1152, 1404, 1429, 1509, 1895
GsuI CTGGAG 1 cut(s) 1504
HaeII RGCGCY 2 cut(s) 1154, 1897
HaeIII GGCC 5 cut(s) 68, 475, 1247, 1528, 1793
HgaI GACGC 2 cut(s) 190, 367
HhaI GCGC 7 cut(s) 248, 378, 1153, 1405, 1430, 1510, 1896
Hin1I GRCGYC 3 cut(s) 201, 1023, 1894
Hin1II CATG 6 cut(s) 25, 385, 1246, 1323, 1699, 1741
Hin6I GCGC 7 cut(s) 246, 376, 1151, 1403, 1428, 1508, 1894
HinP1I GCGC 7 cut(s) 246, 376, 1151, 1403, 1428, 1508, 1894
HincII GTYRAC 2 cut(s) 1778, 1812
HindII GTYRAC 2 cut(s) 1778, 1812
HindIII AAGCTT 1 cut(s) 38
HphI GGTGA 1 cut(s) 1759
Hpy166II GTNNAC 6 cut(s) 1392, 1618, 1711, 1778, 1812, 1876
Hpy188I TCNGA 8 cut(s) 148, 166, 283, 459, 1005, 1192, 1204, 1330
Hpy188III TCNNGA 7 cut(s) 260, 334, 567, 581, 726, 1165, 1837
Hpy8I GTNNAC 6 cut(s) 1392, 1618, 1711, 1778, 1812, 1876
Hpy99I CGWCG 7 cut(s) 1025, 1028, 1181, 1277, 1280, 1436, 1870
HpyAV CCTTC 8 cut(s) 181, 543, 836, 1094, 1127, 1592, 1622, 1738
HpyCH4III ACNGT 2 cut(s) 1124, 1870
HpyCH4IV ACGT 2 cut(s) 1023, 1643
HpyCH4V TGCA 6 cut(s) 127, 420, 1392, 1438, 1711, 1830
HpyF3I CTNAG 5 cut(s) 9, 145, 662, 970, 1557
HpySE526I ACGT 2 cut(s) 1023, 1643
Hsp92I GRCGYC 3 cut(s) 201, 1023, 1894
Hsp92II CATG 6 cut(s) 25, 385, 1246, 1323, 1699, 1741
HspAI GCGC 7 cut(s) 246, 376, 1151, 1403, 1428, 1508, 1894
KasI GGCGCC 1 cut(s) 1893
KpnI GGTACC 1 cut(s) 1488
KroI GCCGGC 1 cut(s) 1147
KroNI GCCGGC 1 cut(s) 1149
Kzo9I GATC 8 cut(s) 454, 728, 976, 1142, 1194, 1347, 1476, 1749
LguI GCTCTTC 1 cut(s) 96
LmnI GCTCC 7 cut(s) 167, 773, 1069, 1255, 1336, 1470, 1570
Lsp1109I GCAGC 4 cut(s) 230, 964, 1468, 1662
LweI GCATC 5 cut(s) 429, 1146, 1195, 1206, 1208
MaeI CTAG 7 cut(s) 95, 260, 401, 567, 966, 1140, 1361
MaeII ACGT 2 cut(s) 1023, 1643
MaeIII GTNAC 1 cut(s) 1469
MalI GATC 8 cut(s) 456, 730, 978, 1144, 1196, 1349, 1478, 1751
MbiI CCGCTC 3 cut(s) 1339, 1414, 1723
MboI GATC 8 cut(s) 454, 728, 976, 1142, 1194, 1347, 1476, 1749
MflI RGATCY 1 cut(s) 1347
MhlI GDGCHC 2 cut(s) 1394, 1713
MluCI AATT 5 cut(s) 114, 188, 1095, 1169, 1210
Mly113I GGCGCC 1 cut(s) 1894
MlyI GAGTC 5 cut(s) 356, 419, 727, 1358, 1511
MmeI TCCRAC 4 cut(s) 878, 1047, 1662, 1758
MreI CGCCGGCG 1 cut(s) 1147
MroNI GCCGGC 1 cut(s) 1147
MseI TTAA 3 cut(s) 611, 902, 1172
MslI CAYNNNNRTG 1 cut(s) 415
MspA1I CMGCKG 1 cut(s) 243
MspCI CTTAAG 1 cut(s) 610
MspR9I CCNGG 6 cut(s) 155, 156, 668, 717, 1498, 1816
MvaI CCWGG 1 cut(s) 668
MvnI CGCG 6 cut(s) 378, 1403, 1428, 1475, 1508, 1622
NaeI GCCGGC 1 cut(s) 1149
NarI GGCGCC 1 cut(s) 1894
NciI CCSGG 5 cut(s) 155, 156, 717, 1498, 1816
NcoI CCATGG 2 cut(s) 1242, 1319
NdeII GATC 8 cut(s) 454, 728, 976, 1142, 1194, 1347, 1476, 1749
NgoMIV GCCGGC 1 cut(s) 1147
NheI GCTAGC 1 cut(s) 965
NlaIII CATG 6 cut(s) 25, 385, 1246, 1323, 1699, 1741
NlaIV GGNNCC 6 cut(s) 163, 234, 314, 1332, 1486, 1895
NmuCI GTSAC 1 cut(s) 1469
NspV TTCGAA 1 cut(s) 174
OliI CACNNNNGTG 1 cut(s) 415
PaeR7I CTCGAG 2 cut(s) 956, 1382
PciSI GCTCTTC 1 cut(s) 96
PcsI WCGNNNNNNNCGW 2 cut(s) 1029, 1862
PdiI GCCGGC 1 cut(s) 1149
PfeI GAWTC 7 cut(s) 520, 584, 720, 1042, 1227, 1666, 1853
PflFI GACNNNGTC 1 cut(s) 602
PfoI TCCNGGA 1 cut(s) 715
Ple19I CGATCG 1 cut(s) 1479
PleI GAGTC 5 cut(s) 355, 419, 727, 1358, 1511
PluTI GGCGCC 1 cut(s) 1897
PmaCI CACGTG 1 cut(s) 1644
PmlI CACGTG 1 cut(s) 1644
PpsI GAGTC 5 cut(s) 355, 419, 727, 1358, 1511
Ppu21I YACGTR 1 cut(s) 1644
PpuMI RGGWCCY 1 cut(s) 233
PshAI GACNNNNGTC 1 cut(s) 1521
Psp5II RGGWCCY 1 cut(s) 233
Psp6I CCWGG 1 cut(s) 666
PspCI CACGTG 1 cut(s) 1644
PspGI CCWGG 1 cut(s) 666
PspN4I GGNNCC 6 cut(s) 163, 234, 314, 1332, 1486, 1895
PspPI GGNCC 5 cut(s) 233, 604, 1246, 1527, 1791
PspPPI RGGWCCY 1 cut(s) 233
PspXI VCTCGAGB 2 cut(s) 956, 1382
PstNI CAGNNNCTG 1 cut(s) 1675
PsuI RGATCY 1 cut(s) 1347
PsyI GACNNNGTC 1 cut(s) 602
PvuI CGATCG 1 cut(s) 1479
RgaI GCGATCGC 1 cut(s) 1479
RsaI GTAC 3 cut(s) 695, 1486, 1617
RsaNI GTAC 3 cut(s) 694, 1485, 1616
RseI CAYNNNNRTG 1 cut(s) 415
SapI GCTCTTC 1 cut(s) 96
SaqAI TTAA 3 cut(s) 611, 902, 1172
Sau3AI GATC 8 cut(s) 454, 728, 976, 1142, 1194, 1347, 1476, 1749
Sau96I GGNCC 5 cut(s) 233, 604, 1246, 1527, 1791
SchI GAGTC 5 cut(s) 356, 419, 727, 1358, 1511
ScrFI CCNGG 6 cut(s) 155, 156, 668, 717, 1498, 1816
SduI GDGCHC 2 cut(s) 1394, 1713
SfaAI GCGATCGC 1 cut(s) 1479
SfaNI GCATC 5 cut(s) 429, 1146, 1195, 1206, 1208
SfoI GGCGCC 1 cut(s) 1895
Sfr274I CTCGAG 2 cut(s) 956, 1382
SfuI TTCGAA 1 cut(s) 174
SgfI GCGATCGC 1 cut(s) 1479
SgrAI CRCCGGYG 1 cut(s) 1147
SinI GGWCC 2 cut(s) 233, 604
SlaI CTCGAG 2 cut(s) 956, 1382
SmaI CCCGGG 1 cut(s) 156
SmiMI CAYNNNNRTG 1 cut(s) 415
SmlI CTYRAG 6 cut(s) 321, 610, 724, 956, 1382, 1718
SmoI CTYRAG 6 cut(s) 321, 610, 724, 956, 1382, 1718
Sse9I AATT 5 cut(s) 114, 188, 1095, 1169, 1210
SspDI GGCGCC 1 cut(s) 1893
SspMI CTAG 7 cut(s) 95, 260, 401, 567, 966, 1140, 1361
StyD4I CCNGG 6 cut(s) 153, 154, 666, 715, 1496, 1814
StyI CCWWGG 3 cut(s) 400, 1242, 1319
TaaI ACNGT 2 cut(s) 1124, 1870
TaiI ACGT 2 cut(s) 1026, 1646
TasI AATT 5 cut(s) 114, 188, 1095, 1169, 1210
TatI WGTACW 1 cut(s) 693
TauI GCSGC 8 cut(s) 162, 185, 929, 1403, 1423, 1513, 1641, 1894
TfiI GAWTC 7 cut(s) 520, 584, 720, 1042, 1227, 1666, 1853
Tru1I TTAA 3 cut(s) 611, 902, 1172
Tru9I TTAA 3 cut(s) 611, 902, 1172
TscAI CASTG 1 cut(s) 134
TseFI GTSAC 1 cut(s) 1469
TseI GCWGC 4 cut(s) 243, 952, 1456, 1675
Tsp45I GTSAC 1 cut(s) 1469
TspDTI ATGAA 5 cut(s) 495, 498, 662, 1125, 1754
TspGWI ACGGA 2 cut(s) 669, 1457
TspMI CCCGGG 1 cut(s) 154
TspRI CASTG 1 cut(s) 134
Tth111I GACNNNGTC 1 cut(s) 602
Vha464I CTTAAG 1 cut(s) 610
VneI GTGCAC 2 cut(s) 1390, 1709
VpaK11BI GGWCC 2 cut(s) 233, 604
XapI RAATTY 2 cut(s) 188, 1210
XbaI TCTAGA 2 cut(s) 259, 566
XhoI CTCGAG 2 cut(s) 956, 1382
XmaI CCCGGG 1 cut(s) 154
XmaJI CCTAGG 1 cut(s) 400
XspI CTAG 7 cut(s) 95, 260, 401, 567, 966, 1140, 1361
ZraI GACGTC 1 cut(s) 1024
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.