RLG00000017216

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0006338
Physical Location & Seq
Reverse (-)
14206630 .. 14208919
2290 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017216

Sequence Viewer

Length: 2010 bp
ATGGAGATAACAGAAGCAGCTGAGAAACCAAGCTCCAAAGGCCAAGCATGGTTCTGCACCACTGGGTTACCAAGCGACATTGTGGTGGAAGTTGAAGACATGACCTTTCATCTTCACAAGTTTCCTCTCATGTCCAAAAGCCGAAAGCTTCACAACCTAATCACAGAGCAAGAGGCCAACCCATCACATCCCCAACAAGAGCTAGAAGAAGAGCCGGACGAAATCGAAGAAGTGCAGTGTCAAATAGTCCTCTCAGACTTCCCGGGCGGCTCCGAGACCTTCGAAATCGCCGCCAAATTCTGCTACGGCGTCAAAATCGACCTCAACTCAACCAATGTGGGACCTCTCCGCTGCGCCGGAGAGTATCTAGAAATGACAGAAGAGTACTCCGAAGACAACCTCATCTCAAAAACCGAAAGGTTCCTGTCTCAAGCCGTGTTCAAGAGCTTCAAAGAGTCCATCAAAGCTCTCAAATCCTGCGAGCGCGTCATGCCACTCGCAGAGACCCTAGGCATTACACAGAGGTGCATCGACTCCATCGCTAACAGAGCCACCAACGCCGATCCTAGCCTGTTCGGCTGGCCCGTCAATGAAGTAGCCCCGAACCCAAGTTCATCCAAACACCAGATTCTATGGAATGGGATTGACACAGGTGGAAGAAGAAAAGGGATGTCTAGAGCAAACCATCCAGATTCTTGGCTCGAAGACTTGGTCCTCTTAAGCCTCCCTTTCTTCAAGCGATTGATTATGGCAATGAAAGACGGAAATCTCAGCCTGGAAATGTTGGAGACCTGTTTGATGTACTACGCCAAGAAATACATTCCCGGAATCTCAAGATCGACTCGAAAGTCCTCTTCTTCCACCACCACTCCTAGCTCCTCTTTAGCTTTGGAAAACCAACAGAGAGAACTATTGGAGACCATAATCTCGAACCTTCCATTGGAGAAAACGCCCAGACCTCCAACCAATACAAGATTTCTATTTGGGCTGTTGAGAACAGCGAATATCTTAAACGCCTCGCAGGGATGTAAAGCCGCATTGGAGAAGAAGATTGGGTCGCAGCTCGAGCAAGCTAGCTTGGACGATCTGCTCATACCGAGCTATTCGTATCTGAATGAGACCCTATACGACGTCGACTGCGTGGAGAGGATTCTGGGGTATTTCTTAGATGGGTTGGATCAGAGAAACAGAAACAGAGATGGAATTGACGGTGGAGATGAAGATGAAGACCGTGATATAGAAGGTGCTAGATCGCCGGCGCTGATGCTTGTCGGGAAATTAACCGACGAGTATCTCTCCGAGATCGCATCGGATGCGAATCTGAAGCCGGATAGATTCTACAACTTTGCCATGGCGCTGCCGGAGCAGGCGAGGCTGTTCGACGACGGGCTTTACAGAGCAGTTGATGTTTATCTAAAGGCTCATCCATGGATATCGGAACCGGAGCGGGAGAAGATCTGCGGGATACTAGACTCCCAGAAGCTCACACTCGAGGCGTGCACGCACGCCGCGCAGAACGAGCGGTTGCCGCTACGCGCCGTCGTGCAAGTCTTGTTCTTCGAGCAGCTTCAGCTCCGTCACGCGATCGCCGGTACCCTTATCGCCGGGGAGACTGCGCCGCCGGACTCCAGTCGGCCTTCGGTGTTGCGAAGAGAGGCTGAGACTGAGGAGGACGAGGAGCAGGAGGAGGAGGAAGGCGGTGCTGTGGAGGTACACGCGGAGGAAGGAGGAGGCGGCACGTGGAGGTCGGCTGTGAGGGAGAATCAGGTGCTGCGGTTGGATATGGATAGCATGAGGACGCGGGTGCACCAACTAGAGCGGGAGTGTTCCAACATGAAAAAGGTGATCGAAAAGATTGACAACAAATCGGGCCAACCTGATGGACGGGCGGGATGGAAAGGCTCGTTGACCCGGCGGTTCGGGTGCAAGTTCAAGACCCAAGTGTGCGATTCGCACGAGCCGACGGTCGTGGACGGTCGGAAAGGGCGGCGCCACCATCATCAACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

670

Amino Acids

75.2

Weight (kDa)

5.16

Isoelectric Point (pI)

52.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 231 - 500 9.3e-86 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 847
AatII GACGTC 1 cut(s) 1134
Acc65I GGTACC 1 cut(s) 1592
AccB1I GGYRCC 2 cut(s) 1592, 1989
AccBSI CCGCTC 3 cut(s) 1447, 1522, 1819
AccI GTMKAC 1 cut(s) 1134
AccII CGCG 6 cut(s) 486, 1511, 1536, 1583, 1718, 1801
AclWI GGATC 2 cut(s) 557, 1185
AcsI RAATTY 1 cut(s) 296
AcuI CTGAAG 2 cut(s) 1343, 1553
AcvI CACGTG 1 cut(s) 1740
AcyI GRCGYC 3 cut(s) 309, 1131, 1990
AfaI GTAC 4 cut(s) 386, 803, 1594, 1713
AfiI CCNNNNNNNGG 1 cut(s) 940
AflII CTTAAG 1 cut(s) 718
AgsI TTSAA 5 cut(s) 95, 442, 451, 736, 1933
AjnI CCWGG 1 cut(s) 774
AjuI GAANNNNNNNTTGG 2 cut(s) 923, 955
AleI CACNNNNGTG 1 cut(s) 523
Alw21I GWGCWC 2 cut(s) 1502, 1809
Alw26I GTCTC 8 cut(s) 269, 432, 497, 782, 911, 1112, 1604, 1655
Alw44I GTGCAC 2 cut(s) 1498, 1805
AlwI GGATC 2 cut(s) 557, 1185
AlwNI CAGNNNCTG 1 cut(s) 1771
Ama87I CYCGRG 3 cut(s) 262, 1064, 1490
AoxI GGCC 5 cut(s) 40, 174, 581, 1634, 1870
ApaLI GTGCAC 2 cut(s) 1498, 1805
ApeKI GCWGC 6 cut(s) 17, 351, 1060, 1357, 1564, 1771
ApoI RAATTY 1 cut(s) 296
ArsI GACNNNNNNTTYG 2 cut(s) 696, 728
AsiSI GCGATCGC 1 cut(s) 1587
Asp718I GGTACC 1 cut(s) 1592
AspA2I CCTAGG 1 cut(s) 508
AspLEI GCGC 8 cut(s) 356, 486, 1261, 1357, 1513, 1538, 1618, 1992
AspS9I GGNCC 4 cut(s) 341, 582, 712, 1870
AsuC2I CCSGG 5 cut(s) 263, 264, 825, 1606, 1912
AsuHPI GGTGA 1 cut(s) 1855
AsuII TTCGAA 1 cut(s) 282
AsuNHI GCTAGC 1 cut(s) 1073
AvaI CYCGRG 3 cut(s) 262, 1064, 1490
AvaII GGWCC 2 cut(s) 341, 712
AvrII CCTAGG 1 cut(s) 508
BaeGI GKGCMC 2 cut(s) 1502, 1809
BanI GGYRCC 2 cut(s) 1592, 1989
BauI CACGAG 1 cut(s) 1955
BbrPI CACGTG 1 cut(s) 1740
BbsI GAAGAC 4 cut(s) 102, 399, 711, 1233
Bbv12I GWGCWC 2 cut(s) 1502, 1809
BbvI GCAGC 6 cut(s) 29, 338, 1072, 1344, 1576, 1758
BccI CCATC 9 cut(s) 190, 467, 545, 693, 1163, 1193, 1874, 1887, 2004
BceAI ACGGC 3 cut(s) 322, 419, 1523
BciT130I CCWGG 1 cut(s) 776
BciVI GTATCC 1 cut(s) 1458
BcnI CCSGG 5 cut(s) 263, 264, 825, 1606, 1912
BcoDI GTCTC 8 cut(s) 269, 432, 497, 782, 911, 1112, 1604, 1655
BfoI RGCGCY 3 cut(s) 1262, 1358, 1993
BfrI CTTAAG 1 cut(s) 718
BfuI GTATCC 1 cut(s) 1458
BglI GCCNNNNNGGC 1 cut(s) 576
BglII AGATCT 1 cut(s) 1455
BlnI CCTAGG 1 cut(s) 508
BmcAI AGTACT 1 cut(s) 386
Bme1390I CCNGG 6 cut(s) 263, 264, 776, 825, 1606, 1912
Bme18I GGWCC 2 cut(s) 341, 712
BmeT110I CYCGRG 3 cut(s) 262, 1064, 1490
BmgT120I GGNCC 4 cut(s) 341, 582, 712, 1870
BmiI GGNNCC 6 cut(s) 271, 342, 422, 1440, 1594, 1991
BmrFI CCNGG 6 cut(s) 263, 264, 776, 825, 1606, 1912
BmrI ACTGGG 1 cut(s) 72
BmsI GCATC 4 cut(s) 537, 1254, 1303, 1316
BmtI GCTAGC 1 cut(s) 1077
BmuI ACTGGG 1 cut(s) 72
BoxI GACNNNNGTC 1 cut(s) 1629
BpiI GAAGAC 4 cut(s) 102, 399, 711, 1233
BplI GAGNNNNNCTC 2 cut(s) 1280, 1312
BpmI CTGGAG 1 cut(s) 1612
Bpu14I TTCGAA 1 cut(s) 282
BpuEI CTTGAG 2 cut(s) 414, 817
BpuMI CCSGG 5 cut(s) 263, 264, 825, 1606, 1912
BsaAI YACGTR 1 cut(s) 1740
BsaBI GATNNNNATC 2 cut(s) 1317, 1410
BsaHI GRCGYC 3 cut(s) 309, 1131, 1990
BsaI GGTCTC 5 cut(s) 269, 497, 782, 911, 1112
BsaJI CCNNGG 5 cut(s) 262, 508, 1350, 1427, 1605
BsaWI WCCGGW 1 cut(s) 1441
BsaXI ACNNNNNCTCC 2 cut(s) 853, 883
Bsc4I CCNNNNNNNGG 1 cut(s) 940
Bse118I RCCGGY 2 cut(s) 1255, 1589
Bse1I ACTGG 2 cut(s) 67, 1629
Bse3DI GCAATG 1 cut(s) 759
Bse8I GATNNNNATC 2 cut(s) 1317, 1410
BseBI CCWGG 1 cut(s) 776
BseDI CCNNGG 5 cut(s) 262, 508, 1350, 1427, 1605
BseGI GGATG 8 cut(s) 187, 614, 675, 685, 1031, 1318, 1423, 1898
BseJI GATNNNNATC 2 cut(s) 1317, 1410
BseLI CCNNNNNNNGG 1 cut(s) 940
BseMI GCAATG 1 cut(s) 759
BseMII CTCAG 5 cut(s) 12, 267, 784, 1650, 1656
BseNI ACTGG 2 cut(s) 67, 1629
BseRI GAGGAG 6 cut(s) 868, 1682, 1691, 1700, 1703, 1743
BseSI GKGCMC 2 cut(s) 1502, 1809
BseXI GCAGC 6 cut(s) 29, 338, 1072, 1344, 1576, 1758
BsgI GTGCAG 2 cut(s) 40, 254
Bsh1236I CGCG 6 cut(s) 486, 1511, 1536, 1583, 1718, 1801
Bsh1285I CGRYCG 3 cut(s) 1587, 1968, 1978
BshFI GGCC 5 cut(s) 42, 176, 583, 1636, 1872
BshNI GGYRCC 2 cut(s) 1592, 1989
BsiEI CGRYCG 3 cut(s) 1587, 1968, 1978
BsiHKAI GWGCWC 2 cut(s) 1502, 1809
BsiHKCI CYCGRG 3 cut(s) 262, 1064, 1490
BslFI GGGAC 1 cut(s) 354
BslI CCNNNNNNNGG 1 cut(s) 940
BsmAI GTCTC 8 cut(s) 269, 432, 497, 782, 911, 1112, 1604, 1655
BsmFI GGGAC 1 cut(s) 354
BsnI GGCC 5 cut(s) 42, 176, 583, 1636, 1872
Bso31I GGTCTC 5 cut(s) 269, 497, 782, 911, 1112
BsoBI CYCGRG 3 cut(s) 262, 1064, 1490
Bsp119I TTCGAA 1 cut(s) 282
Bsp1286I GDGCHC 2 cut(s) 1502, 1809
Bsp143I GATC 9 cut(s) 562, 836, 1084, 1177, 1250, 1302, 1455, 1584, 1845
Bsp19I CCATGG 2 cut(s) 1350, 1427
BspANI GGCC 5 cut(s) 42, 176, 583, 1636, 1872
BspCNI CTCAG 5 cut(s) 13, 266, 783, 1651, 1657
BspFNI CGCG 6 cut(s) 486, 1511, 1536, 1583, 1718, 1801
BspLI GGNNCC 6 cut(s) 271, 342, 422, 1440, 1594, 1991
BspOI GCTAGC 1 cut(s) 1077
BspPI GGATC 2 cut(s) 557, 1185
BspQI GCTCTTC 1 cut(s) 204
BspT104I TTCGAA 1 cut(s) 282
BspT107I GGYRCC 2 cut(s) 1592, 1989
BspTI CTTAAG 1 cut(s) 718
BspTNI GGTCTC 5 cut(s) 269, 497, 782, 911, 1112
BsrBI CCGCTC 3 cut(s) 1447, 1522, 1819
BsrDI GCAATG 1 cut(s) 759
BsrFI RCCGGY 2 cut(s) 1255, 1589
BsrI ACTGG 2 cut(s) 67, 1629
BssAI RCCGGY 2 cut(s) 1255, 1589
BssECI CCNNGG 5 cut(s) 262, 508, 1350, 1427, 1605
BssMI GATC 9 cut(s) 562, 836, 1084, 1177, 1250, 1302, 1455, 1584, 1845
BssNI GRCGYC 3 cut(s) 309, 1131, 1990
BssSI CACGAG 1 cut(s) 1955
BssT1I CCWWGG 3 cut(s) 508, 1350, 1427
Bst2BI CACGAG 1 cut(s) 1955
Bst2UI CCWGG 1 cut(s) 776
Bst4CI ACNGT 4 cut(s) 1211, 1232, 1966, 1976
Bst6I CTCTTC 4 cut(s) 204, 375, 859, 1645
BstACI GRCGYC 3 cut(s) 309, 1131, 1990
BstAFI CTTAAG 1 cut(s) 718
BstAPI GCANNNNNTGC 1 cut(s) 1313
BstBAI YACGTR 1 cut(s) 1740
BstBI TTCGAA 1 cut(s) 282
BstC8I GCNNGC 9 cut(s) 482, 581, 1071, 1075, 1257, 1368, 1498, 1502, 1506
BstDEI CTNAG 6 cut(s) 21, 253, 770, 1165, 1659, 1665
BstDSI CCRYGG 2 cut(s) 1350, 1427
BstEII GGTNACC 1 cut(s) 66
BstF5I GGATG 8 cut(s) 187, 614, 675, 685, 1031, 1318, 1423, 1898
BstFNI CGCG 6 cut(s) 486, 1511, 1536, 1583, 1718, 1801
BstH2I RGCGCY 3 cut(s) 1262, 1358, 1993
BstHHI GCGC 8 cut(s) 356, 486, 1261, 1357, 1513, 1538, 1618, 1992
BstKTI GATC 9 cut(s) 565, 839, 1087, 1180, 1253, 1305, 1458, 1587, 1848
BstMAI GTCTC 8 cut(s) 269, 432, 497, 782, 911, 1112, 1604, 1655
BstMBI GATC 9 cut(s) 562, 836, 1084, 1177, 1250, 1302, 1455, 1584, 1845
BstMCI CGRYCG 3 cut(s) 1587, 1968, 1978
BstNI CCWGG 1 cut(s) 776
BstPAI GACNNNNGTC 1 cut(s) 1629
BstPI GGTNACC 1 cut(s) 66
BstSCI CCNGG 6 cut(s) 261, 262, 774, 823, 1604, 1910
BstSLI GKGCMC 2 cut(s) 1502, 1809
BstUI CGCG 6 cut(s) 486, 1511, 1536, 1583, 1718, 1801
BstV1I GCAGC 6 cut(s) 29, 338, 1072, 1344, 1576, 1758
BstV2I GAAGAC 4 cut(s) 102, 399, 711, 1233
BstX2I RGATCY 1 cut(s) 1455
BstXI CCANNNNNNTGG 2 cut(s) 696, 1880
BstYI RGATCY 1 cut(s) 1455
BsuI GTATCC 1 cut(s) 1458
BsuRI GGCC 5 cut(s) 42, 176, 583, 1636, 1872
BtgI CCRYGG 2 cut(s) 1350, 1427
BtgZI GCGATG 1 cut(s) 523
BtsCI GGATG 8 cut(s) 187, 614, 675, 685, 1031, 1318, 1423, 1898
BtsI GCAGTG 1 cut(s) 242
BtsIMutI CAGTG 2 cut(s) 60, 242
Cac8I GCNNGC 9 cut(s) 482, 581, 1071, 1075, 1257, 1368, 1498, 1502, 1506
CaiI CAGNNNCTG 1 cut(s) 1771
CfoI GCGC 8 cut(s) 356, 486, 1261, 1357, 1513, 1538, 1618, 1992
Cfr10I RCCGGY 2 cut(s) 1255, 1589
Cfr13I GGNCC 4 cut(s) 341, 582, 712, 1870
Cfr9I CCCGGG 1 cut(s) 262
CseI GACGC 3 cut(s) 298, 475, 1807
Csp6I GTAC 4 cut(s) 385, 802, 1593, 1712
CspCI CAANNNNNGTGG 2 cut(s) 318, 353
CviAII CATG 8 cut(s) 48, 100, 130, 490, 1351, 1428, 1792, 1834
CviQI GTAC 4 cut(s) 385, 802, 1593, 1712
DdeI CTNAG 6 cut(s) 21, 253, 770, 1165, 1659, 1665
DinI GGCGCC 1 cut(s) 1991
DpnI GATC 9 cut(s) 564, 838, 1086, 1179, 1252, 1304, 1457, 1586, 1847
DpnII GATC 9 cut(s) 562, 836, 1084, 1177, 1250, 1302, 1455, 1584, 1845
DrdI GACNNNNNNGTC 1 cut(s) 847
DseDI GACNNNNNNGTC 1 cut(s) 847
Eam1104I CTCTTC 4 cut(s) 204, 375, 859, 1645
EarI CTCTTC 4 cut(s) 204, 375, 859, 1645
Eco130I CCWWGG 3 cut(s) 508, 1350, 1427
Eco31I GGTCTC 5 cut(s) 269, 497, 782, 911, 1112
Eco32I GATATC 1 cut(s) 1434
Eco47I GGWCC 2 cut(s) 341, 712
Eco57I CTGAAG 2 cut(s) 1343, 1553
Eco72I CACGTG 1 cut(s) 1740
Eco88I CYCGRG 3 cut(s) 262, 1064, 1490
Eco91I GGTNACC 1 cut(s) 66
EcoO109I RGGNCCY 1 cut(s) 341
EcoO65I GGTNACC 1 cut(s) 66
EcoRII CCWGG 1 cut(s) 774
EcoRV GATATC 1 cut(s) 1434
EcoT14I CCWWGG 3 cut(s) 508, 1350, 1427
EgeI GGCGCC 1 cut(s) 1991
EheI GGCGCC 1 cut(s) 1991
ErhI CCWWGG 3 cut(s) 508, 1350, 1427
FaeI CATG 8 cut(s) 51, 103, 133, 493, 1354, 1431, 1795, 1837
FalI AAGNNNNNCTT 2 cut(s) 712, 744
FaqI GGGAC 1 cut(s) 354
FatI CATG 8 cut(s) 47, 99, 129, 489, 1350, 1427, 1791, 1833
FauI CCCGC 5 cut(s) 1440, 1454, 1794, 1812, 1882
FblI GTMKAC 1 cut(s) 1134
FokI GGATG 8 cut(s) 174, 601, 672, 682, 1038, 1325, 1410, 1905
GlaI GCGC 8 cut(s) 355, 485, 1260, 1356, 1512, 1537, 1617, 1991
GsuI CTGGAG 1 cut(s) 1612
HaeII RGCGCY 3 cut(s) 1262, 1358, 1993
HaeIII GGCC 5 cut(s) 42, 176, 583, 1636, 1872
HgaI GACGC 3 cut(s) 298, 475, 1807
HhaI GCGC 8 cut(s) 356, 486, 1261, 1357, 1513, 1538, 1618, 1992
Hin1I GRCGYC 3 cut(s) 309, 1131, 1990
Hin1II CATG 8 cut(s) 51, 103, 133, 493, 1354, 1431, 1795, 1837
Hin6I GCGC 8 cut(s) 354, 484, 1259, 1355, 1511, 1536, 1616, 1990
HinP1I GCGC 8 cut(s) 354, 484, 1259, 1355, 1511, 1536, 1616, 1990
HincII GTYRAC 2 cut(s) 1135, 1908
HindII GTYRAC 2 cut(s) 1135, 1908
HindIII AAGCTT 1 cut(s) 146
HphI GGTGA 1 cut(s) 1855
Hpy166II GTNNAC 6 cut(s) 1135, 1500, 1714, 1807, 1908, 1972
Hpy188III TCNNGA 8 cut(s) 368, 442, 675, 689, 834, 928, 1273, 1933
Hpy8I GTNNAC 6 cut(s) 1135, 1500, 1714, 1807, 1908, 1972
Hpy99I CGWCG 7 cut(s) 1133, 1136, 1289, 1385, 1388, 1544, 1966
HpyAV CCTTC 6 cut(s) 289, 944, 1235, 1647, 1688, 1718
HpyCH4III ACNGT 4 cut(s) 1211, 1232, 1966, 1976
HpyCH4IV ACGT 2 cut(s) 1131, 1739
HpyCH4V TGCA 7 cut(s) 57, 235, 528, 1500, 1546, 1807, 1926
HpyF3I CTNAG 6 cut(s) 21, 253, 770, 1165, 1659, 1665
HpySE526I ACGT 2 cut(s) 1131, 1739
Hsp92I GRCGYC 3 cut(s) 309, 1131, 1990
Hsp92II CATG 8 cut(s) 51, 103, 133, 493, 1354, 1431, 1795, 1837
HspAI GCGC 8 cut(s) 354, 484, 1259, 1355, 1511, 1536, 1616, 1990
KasI GGCGCC 1 cut(s) 1989
KpnI GGTACC 1 cut(s) 1596
KroI GCCGGC 1 cut(s) 1255
KroNI GCCGGC 1 cut(s) 1257
Kzo9I GATC 9 cut(s) 562, 836, 1084, 1177, 1250, 1302, 1455, 1584, 1845
LguI GCTCTTC 1 cut(s) 204
LmnI GCTCC 7 cut(s) 38, 275, 881, 1363, 1444, 1578, 1678
Lsp1109I GCAGC 6 cut(s) 29, 338, 1072, 1344, 1576, 1758
LweI GCATC 4 cut(s) 537, 1254, 1303, 1316
MaeII ACGT 2 cut(s) 1131, 1739
MaeIII GTNAC 2 cut(s) 66, 1577
MalI GATC 9 cut(s) 564, 838, 1086, 1179, 1252, 1304, 1457, 1586, 1847
MbiI CCGCTC 3 cut(s) 1447, 1522, 1819
MboI GATC 9 cut(s) 562, 836, 1084, 1177, 1250, 1302, 1455, 1584, 1845
MflI RGATCY 1 cut(s) 1455
MhlI GDGCHC 2 cut(s) 1502, 1809
MluCI AATT 3 cut(s) 296, 1203, 1277
Mly113I GGCGCC 1 cut(s) 1990
MlyI GAGTC 5 cut(s) 464, 527, 835, 1466, 1619
MmeI TCCRAC 6 cut(s) 765, 986, 1155, 1758, 1854, 1958
MreI CGCCGGCG 1 cut(s) 1255
MroNI GCCGGC 1 cut(s) 1255
MseI TTAA 3 cut(s) 719, 1010, 1280
MslI CAYNNNNRTG 2 cut(s) 83, 523
MspA1I CMGCKG 2 cut(s) 20, 351
MspCI CTTAAG 1 cut(s) 718
MspR9I CCNGG 6 cut(s) 263, 264, 776, 825, 1606, 1912
MvaI CCWGG 1 cut(s) 776
MvnI CGCG 6 cut(s) 486, 1511, 1536, 1583, 1718, 1801
NaeI GCCGGC 1 cut(s) 1257
NarI GGCGCC 1 cut(s) 1990
NciI CCSGG 5 cut(s) 263, 264, 825, 1606, 1912
NcoI CCATGG 2 cut(s) 1350, 1427
NdeII GATC 9 cut(s) 562, 836, 1084, 1177, 1250, 1302, 1455, 1584, 1845
NgoMIV GCCGGC 1 cut(s) 1255
NheI GCTAGC 1 cut(s) 1073
NlaIII CATG 8 cut(s) 51, 103, 133, 493, 1354, 1431, 1795, 1837
NlaIV GGNNCC 6 cut(s) 271, 342, 422, 1440, 1594, 1991
NmuCI GTSAC 1 cut(s) 1577
NspV TTCGAA 1 cut(s) 282
OliI CACNNNNGTG 1 cut(s) 523
PaeR7I CTCGAG 2 cut(s) 1064, 1490
PciSI GCTCTTC 1 cut(s) 204
PcsI WCGNNNNNNNCGW 3 cut(s) 582, 1137, 1958
PdiI GCCGGC 1 cut(s) 1257
PfeI GAWTC 8 cut(s) 628, 692, 828, 1150, 1318, 1335, 1762, 1949
PflFI GACNNNGTC 1 cut(s) 710
PfoI TCCNGGA 1 cut(s) 823
Ple19I CGATCG 1 cut(s) 1587
PleI GAGTC 5 cut(s) 463, 527, 835, 1466, 1619
PluTI GGCGCC 1 cut(s) 1993
PmaCI CACGTG 1 cut(s) 1740
PmlI CACGTG 1 cut(s) 1740
PpsI GAGTC 5 cut(s) 463, 527, 835, 1466, 1619
Ppu21I YACGTR 1 cut(s) 1740
PpuMI RGGWCCY 1 cut(s) 341
PshAI GACNNNNGTC 1 cut(s) 1629
Psp5II RGGWCCY 1 cut(s) 341
Psp6I CCWGG 1 cut(s) 774
PspCI CACGTG 1 cut(s) 1740
PspEI GGTNACC 1 cut(s) 66
PspGI CCWGG 1 cut(s) 774
PspN4I GGNNCC 6 cut(s) 271, 342, 422, 1440, 1594, 1991
PspPI GGNCC 4 cut(s) 341, 582, 712, 1870
PspPPI RGGWCCY 1 cut(s) 341
PspXI VCTCGAGB 2 cut(s) 1064, 1490
PstNI CAGNNNCTG 1 cut(s) 1771
PsuI RGATCY 1 cut(s) 1455
PsyI GACNNNGTC 1 cut(s) 710
PvuI CGATCG 1 cut(s) 1587
PvuII CAGCTG 1 cut(s) 20
RgaI GCGATCGC 1 cut(s) 1587
RsaI GTAC 4 cut(s) 386, 803, 1594, 1713
RsaNI GTAC 4 cut(s) 385, 802, 1593, 1712
RseI CAYNNNNRTG 2 cut(s) 83, 523
SalI GTCGAC 1 cut(s) 1133
SapI GCTCTTC 1 cut(s) 204
SaqAI TTAA 3 cut(s) 719, 1010, 1280
Sau3AI GATC 9 cut(s) 562, 836, 1084, 1177, 1250, 1302, 1455, 1584, 1845
Sau96I GGNCC 4 cut(s) 341, 582, 712, 1870
ScaI AGTACT 1 cut(s) 386
SchI GAGTC 5 cut(s) 464, 527, 835, 1466, 1619
ScrFI CCNGG 6 cut(s) 263, 264, 776, 825, 1606, 1912
SduI GDGCHC 2 cut(s) 1502, 1809
SfaAI GCGATCGC 1 cut(s) 1587
SfaNI GCATC 4 cut(s) 537, 1254, 1303, 1316
SfoI GGCGCC 1 cut(s) 1991
Sfr274I CTCGAG 2 cut(s) 1064, 1490
SfuI TTCGAA 1 cut(s) 282
SgfI GCGATCGC 1 cut(s) 1587
SgrAI CRCCGGYG 1 cut(s) 1255
SinI GGWCC 2 cut(s) 341, 712
SlaI CTCGAG 2 cut(s) 1064, 1490
SmaI CCCGGG 1 cut(s) 264
SmiMI CAYNNNNRTG 2 cut(s) 83, 523
SmlI CTYRAG 5 cut(s) 429, 718, 832, 1064, 1490
SmoI CTYRAG 5 cut(s) 429, 718, 832, 1064, 1490
Sse9I AATT 3 cut(s) 296, 1203, 1277
SspDI GGCGCC 1 cut(s) 1989
StyD4I CCNGG 6 cut(s) 261, 262, 774, 823, 1604, 1910
StyI CCWWGG 3 cut(s) 508, 1350, 1427
TaaI ACNGT 4 cut(s) 1211, 1232, 1966, 1976
TaiI ACGT 2 cut(s) 1134, 1742
TasI AATT 3 cut(s) 296, 1203, 1277
TatI WGTACW 2 cut(s) 384, 801
TauI GCSGC 8 cut(s) 270, 293, 1037, 1511, 1531, 1621, 1737, 1990
TfiI GAWTC 8 cut(s) 628, 692, 828, 1150, 1318, 1335, 1762, 1949
Tru1I TTAA 3 cut(s) 719, 1010, 1280
Tru9I TTAA 3 cut(s) 719, 1010, 1280
TscAI CASTG 2 cut(s) 67, 242
TseFI GTSAC 1 cut(s) 1577
TseI GCWGC 6 cut(s) 17, 351, 1060, 1357, 1564, 1771
Tsp45I GTSAC 1 cut(s) 1577
TspDTI ATGAA 7 cut(s) 98, 603, 606, 770, 1233, 1239, 1850
TspGWI ACGGA 2 cut(s) 777, 1565
TspMI CCCGGG 1 cut(s) 262
TspRI CASTG 2 cut(s) 67, 242
Tth111I GACNNNGTC 1 cut(s) 710
Vha464I CTTAAG 1 cut(s) 718
VneI GTGCAC 2 cut(s) 1498, 1805
VpaK11BI GGWCC 2 cut(s) 341, 712
XapI RAATTY 1 cut(s) 296
XbaI TCTAGA 2 cut(s) 367, 674
XhoI CTCGAG 2 cut(s) 1064, 1490
XmaI CCCGGG 1 cut(s) 262
XmaJI CCTAGG 1 cut(s) 508
XmiI GTMKAC 1 cut(s) 1134
ZraI GACGTC 1 cut(s) 1132
ZrmI AGTACT 1 cut(s) 386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.