MD02G1158300.v1.1

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0006338
Physical Location & Seq
Reverse (-)
13197017 .. 13200480
3464 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1158300.v1.1.491

Sequence Viewer

Length: 2049 bp
ATGGCAGCATCAGCGGCGGCGGCGGCAGCTGAGAAATCAAGCTCCAAAGGCCAAGCATGGTTCTGCACCACTGGATTACCAAGCGACATTGTCGTTGAAGTCGACGACATGACCTTCCATCTTCACAAGTTCCCTCTCATGTCGAAAAGTCGAAAGCTTCACAACCTGATCACCGAGCAAGAGACGAACCCATCAAACCCCCACCAGCAAGTTGACAACGACGACGACGAAATCGAAGAAGTCCAGTGCCAAATATCCCTCTCGGACTTTCCCGGCGGTTCTGAGACCTTCGAGATCGCCGCCAAGTTTTGCTACGGCGTCAAGATCGACCTGAGCTCCTCCAACGTCGTGCCGTTACGTTGCGCCGGAGAGTATTTGGAGATGACGGAGGAGTACTCGGAGGACAACCTCATTTCGAAAACTGAGAGGTTTCTCTCCCAGTCGGTGCTGAAAAGTTTCAAGGAGTCGCTCAGAGCTCTCAAGTCCTGTGAGCGAGTTGCGCCTCTGGCGGAGAATTTGGGGATTACGCAGAGGTGCATAGACTCCGTCGCTTCCCGCGCCACGTCCGCCGATCCCACCCTGTTTGGCTGGCCGGTTAGCGACAGTGGACCCAATCGGAATACTAATGCGGATACTGTTTCGGCTTCTTCTGCTTCCAAACAGCAGATTTTGTGGAATGGGATCGACGCGGGCGGCGGACGGAGAAGAGCCAAACACGCGGATTCATGGCTTGAAGACTTGGTGGTTCTGAGCTTGCCTCTCTTCAAGCGGTTGATTTCCGCCATGAAATCTGGAGATCTGAGCTTGGAGATGGTGGAGACGTGCTTGATGCATTATGCTAAGAAGTACATTCCTGGAATTTCGAGAACGAATCGAAAGCCTTCGTCTTCTTCCTCAGGCGCCGCCGCCGCCGCATCATCGGGTTTAGCTTCGGAGAGTCAGCAGAGAGAGCTTTTGGAGACGATCATCTCCAATCTTCCATTGGAGAAGAGCTCCAGACCTTCGACCGCGACTCGATTCCTCTTCGGGCTTTTGAGAACCGCTAACATACTCAACGCCTCCGATGCCTGCAAGGCCGCCTTGGAGAAGAAGATCGCGTTGCAGCTCCACCAAGCCACCTTAGACGACCTTCTCATCCCGAGCTATTCCTACCTGAACGAGACGCTCTACGACGTCGATTGCATCGAGCGGATCCTCGGCTACTTCTTGAACGGCTTGGATCAGAGAAACACCGCCGGAATCGAAGACGACGACGGTTCTGACGGCGCAGTCCGATCTCCGTCGCTGATGCTCGTCGGAAAACTGATCGACGAGTTTCTCTCCGAGATCGCCTCCGATGCGAATCTCAAACCGGATCGGTTCTACAATCTCGCGATTTCTTTGCCTGATCAAGCTCGGCTCTTCGACGATGGTCTCTACAGAGCTGTCGATGTTTATCTCAAGGCTCATCCATCGCTATCGGAACCTGAGCGCGAGAAGGTCTGCGGTATTCTGGACTGCCAGAAGCTGACGCTGGAGGCGTGCACGCACGCGGCGCAGAACGAGCGATTGCCGCTGCGCGCGGTGGTGCAGGTCCTGTTCTTTGAGCAGCTCCAGCTCCGTCACGCAATCGCCGGAACTCTTCTCGCGGCCGATGTCGCTCCGCCGGAGTCGGCCAGGCCGTCGGTGCTGCGACGCGAGCCAGAGGATGAGGAGGAGGAAGAAGACGACGATGCGGAGGAGGCACGCGGGGAGGAAGAGGACAATGGAGTGGCACGTGCGGAGGAAAGTGGCGGCACGTGGCGCGCGGCGGTGAGGGAGAATCAGGTGTTGCGGTTGGACATGGATAGCATGAGGACGCGGGTGCACCAACTGGAGCGGGAATGCTCCAGCATGAAAAAAGTAATCGAGAAGATTGATAAGTCGGGTCAACCCGGGATAGACGGTTCGGGTTGGAAAAAGTCGTTGACCCGGAGGTTCGGGTGCAAGTTCAAGACCCAGGTGTGCGATTCGCACGAACCTACGGTCGTCGATACGAGAAAAGGACGGCGACACCATCACCAACAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

683

Amino Acids

75.27

Weight (kDa)

5.19

Isoelectric Point (pI)

51.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 241 - 508 1.3e-88 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1268
AatII GACGTC 1 cut(s) 1176
Acc36I ACCTGC 1 cut(s) 1561
AccB1I GGYRCC 1 cut(s) 899
AccBSI CCGCTC 2 cut(s) 1189, 1858
AccI GTMKAC 1 cut(s) 102
AclWI GGATC 6 cut(s) 566, 689, 1186, 1199, 1227, 1362
AcoI YGGCCR 3 cut(s) 590, 1629, 1653
AcsI RAATTY 2 cut(s) 514, 858
AcvI CACGTG 2 cut(s) 1757, 1779
AcyI GRCGYC 3 cut(s) 318, 900, 1173
AfaI GTAC 2 cut(s) 395, 848
AgsI TTSAA 6 cut(s) 98, 460, 734, 766, 1210, 1972
AjiI CACGTC 2 cut(s) 564, 822
AjnI CCWGG 3 cut(s) 853, 1655, 1977
AloI GAACNNNNNNTCC 2 cut(s) 1909, 1941
Alw21I GWGCWC 5 cut(s) 338, 478, 995, 1526, 1848
Alw26I GTCTC 6 cut(s) 176, 278, 812, 953, 1154, 1418
Alw44I GTGCAC 2 cut(s) 1522, 1844
AlwI GGATC 6 cut(s) 566, 689, 1186, 1199, 1227, 1362
AlwNI CAGNNNCTG 2 cut(s) 1507, 1576
Ama87I CYCGRG 2 cut(s) 1138, 1913
AoxI GGCC 6 cut(s) 49, 590, 1074, 1629, 1653, 1658
ApaLI GTGCAC 2 cut(s) 1522, 1844
ApeKI GCWGC 6 cut(s) 5, 26, 1102, 1555, 1588, 1669
ApoI RAATTY 2 cut(s) 514, 858
ArsI GACNNNNNNTTYG 2 cut(s) 1989, 2021
Asp700I GAANNNNTTC 2 cut(s) 455, 880
AspS9I GGNCC 2 cut(s) 608, 1573
AsuC2I CCSGG 4 cut(s) 273, 1914, 1915, 1951
AsuHPI GGTGA 3 cut(s) 163, 1804, 2030
AsuII TTCGAA 1 cut(s) 416
AvaI CYCGRG 2 cut(s) 1138, 1913
AvaII GGWCC 2 cut(s) 608, 1573
AxyI CCTNAGG 1 cut(s) 895
BaeGI GKGCMC 2 cut(s) 1526, 1848
BamHI GGATCC 1 cut(s) 1191
BanI GGYRCC 1 cut(s) 899
BanII GRGCYC 3 cut(s) 338, 478, 995
BbrPI CACGTG 2 cut(s) 1757, 1779
BbsI GAAGAC 4 cut(s) 741, 879, 1251, 1710
Bbv12I GWGCWC 5 cut(s) 338, 478, 995, 1526, 1848
BbvI GCAGC 6 cut(s) 17, 38, 1114, 1542, 1600, 1656
BccI CCATC 6 cut(s) 126, 199, 805, 1403, 1459, 2043
BceAI ACGGC 6 cut(s) 331, 337, 1228, 1279, 1645, 2042
BcgI CGANNNNNNTGC 2 cut(s) 1363, 1397
BciT130I CCWGG 3 cut(s) 855, 1657, 1979
BciVI GTATCC 1 cut(s) 625
BclI TGATCA 2 cut(s) 168, 1387
BcnI CCSGG 4 cut(s) 273, 1914, 1915, 1951
BcoDI GTCTC 6 cut(s) 176, 278, 812, 953, 1154, 1418
BfmI CTRYAG 1 cut(s) 1417
BfoI RGCGCY 1 cut(s) 903
BfuAI ACCTGC 1 cut(s) 1561
BfuI GTATCC 1 cut(s) 625
BglI GCCNNNNNGGC 1 cut(s) 1073
BglII AGATCT 1 cut(s) 796
BmcAI AGTACT 1 cut(s) 395
Bme1390I CCNGG 7 cut(s) 273, 855, 1657, 1914, 1915, 1951, 1979
Bme18I GGWCC 2 cut(s) 608, 1573
BmeT110I CYCGRG 2 cut(s) 1138, 1913
BmgBI CACGTC 2 cut(s) 564, 822
BmgT120I GGNCC 2 cut(s) 608, 1573
BmiI GGNNCC 4 cut(s) 610, 901, 1193, 1464
BmrFI CCNGG 7 cut(s) 273, 855, 1657, 1914, 1915, 1951, 1979
BmrI ACTGGG 1 cut(s) 433
BmsI GCATC 8 cut(s) 17, 819, 923, 1054, 1191, 1278, 1327, 1702
BmuI ACTGGG 1 cut(s) 433
BoxI GACNNNNGTC 1 cut(s) 1410
BpiI GAAGAC 4 cut(s) 741, 879, 1251, 1710
BpmI CTGGAG 6 cut(s) 813, 979, 1535, 1577, 1852, 1874
Bpu10I CCTNAGC 2 cut(s) 332, 1467
Bpu14I TTCGAA 1 cut(s) 416
BpuEI CTTGAG 2 cut(s) 464, 1424
BpuMI CCSGG 4 cut(s) 273, 1914, 1915, 1951
BsaAI YACGTR 2 cut(s) 1757, 1779
BsaBI GATNNNNATC 2 cut(s) 1341, 1434
BsaHI GRCGYC 3 cut(s) 318, 900, 1173
BsaI GGTCTC 2 cut(s) 278, 1418
BsaJI CCNNGG 4 cut(s) 1080, 1195, 1913, 1977
BsaWI WCCGGW 1 cut(s) 1351
BsaXI ACNNNNNCTCC 2 cut(s) 320, 350
Bse118I RCCGGY 1 cut(s) 592
Bse1I ACTGG 4 cut(s) 76, 244, 439, 1857
Bse21I CCTNAGG 1 cut(s) 895
Bse8I GATNNNNATC 2 cut(s) 1341, 1434
BseBI CCWGG 3 cut(s) 855, 1657, 1979
BseDI CCNNGG 4 cut(s) 1080, 1195, 1913, 1977
BseGI GGATG 3 cut(s) 1134, 1447, 1693
BseJI GATNNNNATC 2 cut(s) 1341, 1434
BseMII CTCAG 9 cut(s) 21, 273, 323, 414, 484, 740, 791, 909, 1458
BseNI ACTGG 4 cut(s) 76, 244, 439, 1857
BsePI GCGCGC 2 cut(s) 1558, 1783
BseRI GAGGAG 5 cut(s) 328, 404, 1706, 1709, 1733
BseSI GKGCMC 2 cut(s) 1526, 1848
BseX3I CGGCCG 1 cut(s) 1629
BseXI GCAGC 6 cut(s) 17, 38, 1114, 1542, 1600, 1656
BsgI GTGCAG 2 cut(s) 49, 1589
Bsh1285I CGRYCG 3 cut(s) 1008, 1632, 2007
BshFI GGCC 6 cut(s) 51, 592, 1076, 1631, 1655, 1660
BshNI GGYRCC 1 cut(s) 899
BsiEI CGRYCG 3 cut(s) 1008, 1632, 2007
BsiHKAI GWGCWC 5 cut(s) 338, 478, 995, 1526, 1848
BsiHKCI CYCGRG 2 cut(s) 1138, 1913
BsiSI CCGG 9 cut(s) 273, 366, 593, 1236, 1352, 1614, 1646, 1914, 1951
BsmAI GTCTC 6 cut(s) 176, 278, 812, 953, 1154, 1418
BsmBI CGTCTC 4 cut(s) 176, 812, 953, 1154
BsmI GAATGC 1 cut(s) 1868
BsnI GGCC 6 cut(s) 51, 592, 1076, 1631, 1655, 1660
Bso31I GGTCTC 2 cut(s) 278, 1418
BsoBI CYCGRG 2 cut(s) 1138, 1913
Bsp119I TTCGAA 1 cut(s) 416
Bsp1286I GDGCHC 5 cut(s) 338, 478, 995, 1526, 1848
Bsp68I TCGCGA 1 cut(s) 1373
BspANI GGCC 6 cut(s) 51, 592, 1076, 1631, 1655, 1660
BspCNI CTCAG 9 cut(s) 22, 274, 324, 415, 483, 741, 792, 908, 1459
BspLI GGNNCC 4 cut(s) 610, 901, 1193, 1464
BspMI ACCTGC 1 cut(s) 1561
BspPI GGATC 6 cut(s) 566, 689, 1186, 1199, 1227, 1362
BspQI GCTCTTC 3 cut(s) 700, 983, 1406
BspT104I TTCGAA 1 cut(s) 416
BspT107I GGYRCC 1 cut(s) 899
BspTNI GGTCTC 2 cut(s) 278, 1418
BsrBI CCGCTC 2 cut(s) 1189, 1858
BsrFI RCCGGY 1 cut(s) 592
BsrI ACTGG 4 cut(s) 76, 244, 439, 1857
BssAI RCCGGY 1 cut(s) 592
BssECI CCNNGG 4 cut(s) 1080, 1195, 1913, 1977
BssHII GCGCGC 2 cut(s) 1558, 1783
BssNI GRCGYC 3 cut(s) 318, 900, 1173
BssT1I CCWWGG 1 cut(s) 1080
Bst2UI CCWGG 3 cut(s) 855, 1657, 1979
Bst4CI ACNGT 6 cut(s) 605, 637, 1256, 1925, 2005, 2046
Bst6I CTCTTC 7 cut(s) 700, 767, 983, 1028, 1406, 1626, 1731
BstACI GRCGYC 3 cut(s) 318, 900, 1173
BstBAI YACGTR 2 cut(s) 1757, 1779
BstBI TTCGAA 1 cut(s) 416
BstF5I GGATG 3 cut(s) 1134, 1447, 1693
BstH2I RGCGCY 1 cut(s) 903
BstMAI GTCTC 6 cut(s) 176, 278, 812, 953, 1154, 1418
BstMCI CGRYCG 3 cut(s) 1008, 1632, 2007
BstNI CCWGG 3 cut(s) 855, 1657, 1979
BstPAI GACNNNNGTC 1 cut(s) 1410
BstSCI CCNGG 7 cut(s) 271, 853, 1655, 1912, 1913, 1949, 1977
BstSFI CTRYAG 1 cut(s) 1417
BstSLI GKGCMC 2 cut(s) 1526, 1848
BstV1I GCAGC 6 cut(s) 17, 38, 1114, 1542, 1600, 1656
BstV2I GAAGAC 4 cut(s) 741, 879, 1251, 1710
BstX2I RGATCY 2 cut(s) 796, 1191
BstYI RGATCY 2 cut(s) 796, 1191
BstZI CGGCCG 1 cut(s) 1629
Bsu36I CCTNAGG 1 cut(s) 895
BsuI GTATCC 1 cut(s) 625
BsuRI GGCC 6 cut(s) 51, 592, 1076, 1631, 1655, 1660
BtgZI GCGATG 1 cut(s) 1437
BtrI CACGTC 2 cut(s) 564, 822
BtsCI GGATG 3 cut(s) 1134, 1447, 1693
BtsIMutI CAGTG 3 cut(s) 69, 251, 610
BtuMI TCGCGA 1 cut(s) 1373
BveI ACCTGC 1 cut(s) 1561
CaiI CAGNNNCTG 2 cut(s) 1507, 1576
Cfr10I RCCGGY 1 cut(s) 592
Cfr13I GGNCC 2 cut(s) 608, 1573
Cfr9I CCCGGG 1 cut(s) 1913
CseI GACGC 6 cut(s) 307, 695, 1171, 1519, 1683, 1846
Csp6I GTAC 2 cut(s) 394, 847
CspCI CAANNNNNGTGG 2 cut(s) 565, 600
CviAII CATG 8 cut(s) 57, 109, 139, 726, 784, 1822, 1831, 1873
CviQI GTAC 2 cut(s) 394, 847
DinI GGCGCC 1 cut(s) 901
DrdI GACNNNNNNGTC 1 cut(s) 1268
DseDI GACNNNNNNGTC 1 cut(s) 1268
EaeI YGGCCR 3 cut(s) 590, 1629, 1653
EagI CGGCCG 1 cut(s) 1629
Eam1104I CTCTTC 7 cut(s) 700, 767, 983, 1028, 1406, 1626, 1731
EarI CTCTTC 7 cut(s) 700, 767, 983, 1028, 1406, 1626, 1731
EciI GGCGGA 5 cut(s) 524, 556, 711, 769, 1632
Ecl136II GAGCTC 3 cut(s) 336, 476, 993
EclXI CGGCCG 1 cut(s) 1629
Eco130I CCWWGG 1 cut(s) 1080
Eco24I GRGCYC 3 cut(s) 338, 478, 995
Eco31I GGTCTC 2 cut(s) 278, 1418
Eco47I GGWCC 2 cut(s) 608, 1573
Eco52I CGGCCG 1 cut(s) 1629
Eco53kI GAGCTC 3 cut(s) 336, 476, 993
Eco72I CACGTG 2 cut(s) 1757, 1779
Eco81I CCTNAGG 1 cut(s) 895
Eco88I CYCGRG 2 cut(s) 1138, 1913
EcoICRI GAGCTC 3 cut(s) 336, 476, 993
EcoO109I RGGNCCY 1 cut(s) 1573
EcoRII CCWGG 3 cut(s) 853, 1655, 1977
EcoT14I CCWWGG 1 cut(s) 1080
EcoT22I ATGCAT 1 cut(s) 834
EcoT38I GRGCYC 3 cut(s) 338, 478, 995
EgeI GGCGCC 1 cut(s) 901
EheI GGCGCC 1 cut(s) 901
ErhI CCWWGG 1 cut(s) 1080
Esp3I CGTCTC 4 cut(s) 176, 812, 953, 1154
FaeI CATG 8 cut(s) 60, 112, 142, 729, 787, 1825, 1834, 1876
FalI AAGNNNNNCTT 2 cut(s) 1064, 1096
FatI CATG 8 cut(s) 56, 108, 138, 725, 783, 1821, 1830, 1872
FauI CCCGC 5 cut(s) 563, 682, 1721, 1833, 1851
FbaI TGATCA 2 cut(s) 168, 1387
FblI GTMKAC 1 cut(s) 102
FokI GGATG 3 cut(s) 1121, 1434, 1700
FriOI GRGCYC 3 cut(s) 338, 478, 995
GsuI CTGGAG 6 cut(s) 813, 979, 1535, 1577, 1852, 1874
HaeII RGCGCY 1 cut(s) 903
HaeIII GGCC 6 cut(s) 51, 592, 1076, 1631, 1655, 1660
HapII CCGG 9 cut(s) 273, 366, 593, 1236, 1352, 1614, 1646, 1914, 1951
HgaI GACGC 6 cut(s) 307, 695, 1171, 1519, 1683, 1846
Hin1I GRCGYC 3 cut(s) 318, 900, 1173
Hin1II CATG 8 cut(s) 60, 112, 142, 729, 787, 1825, 1834, 1876
HincII GTYRAC 4 cut(s) 103, 214, 1910, 1947
HindII GTYRAC 4 cut(s) 103, 214, 1910, 1947
HindIII AAGCTT 1 cut(s) 155
HpaII CCGG 9 cut(s) 273, 366, 593, 1236, 1352, 1614, 1646, 1914, 1951
HphI GGTGA 3 cut(s) 163, 1804, 2030
Hpy166II GTNNAC 7 cut(s) 103, 214, 608, 1524, 1846, 1910, 1947
Hpy8I GTNNAC 7 cut(s) 103, 214, 608, 1524, 1846, 1910, 1947
HpyAV CCTTC 6 cut(s) 124, 298, 891, 1011, 1139, 1471
HpyCH4III ACNGT 6 cut(s) 605, 637, 1256, 1925, 2005, 2046
HpyCH4IV ACGT 7 cut(s) 345, 358, 563, 821, 1173, 1756, 1778
HpySE526I ACGT 7 cut(s) 345, 358, 563, 821, 1173, 1756, 1778
Hsp92I GRCGYC 3 cut(s) 318, 900, 1173
Hsp92II CATG 8 cut(s) 60, 112, 142, 729, 787, 1825, 1834, 1876
KasI GGCGCC 1 cut(s) 899
Ksp22I TGATCA 2 cut(s) 168, 1387
LguI GCTCTTC 3 cut(s) 700, 983, 1406
LmnI GCTCC 9 cut(s) 47, 341, 998, 1110, 1596, 1602, 1645, 1855, 1871
Lsp1109I GCAGC 6 cut(s) 17, 38, 1114, 1542, 1600, 1656
LweI GCATC 8 cut(s) 17, 819, 923, 1054, 1191, 1278, 1327, 1702
MaeII ACGT 7 cut(s) 345, 358, 563, 821, 1173, 1756, 1778
MaeIII GTNAC 2 cut(s) 354, 1601
MbiI CCGCTC 2 cut(s) 1189, 1858
MflI RGATCY 2 cut(s) 796, 1191
MhlI GDGCHC 5 cut(s) 338, 478, 995, 1526, 1848
MluCI AATT 2 cut(s) 514, 858
Mly113I GGCGCC 1 cut(s) 900
MlyI GAGTC 5 cut(s) 473, 536, 946, 1006, 1658
MmeI TCCRAC 4 cut(s) 366, 1276, 1797, 1913
Mph1103I ATGCAT 1 cut(s) 834
MroXI GAANNNNTTC 2 cut(s) 455, 880
MspA1I CMGCKG 3 cut(s) 14, 29, 1555
MspI CCGG 9 cut(s) 273, 366, 593, 1236, 1352, 1614, 1646, 1914, 1951
MspR9I CCNGG 7 cut(s) 273, 855, 1657, 1914, 1915, 1951, 1979
Mva1269I GAATGC 1 cut(s) 1868
MvaI CCWGG 3 cut(s) 855, 1657, 1979
NarI GGCGCC 1 cut(s) 900
NciI CCSGG 4 cut(s) 273, 1914, 1915, 1951
NlaIII CATG 8 cut(s) 60, 112, 142, 729, 787, 1825, 1834, 1876
NlaIV GGNNCC 4 cut(s) 610, 901, 1193, 1464
NmeAIII GCCGAG 2 cut(s) 1176, 1375
NmuCI GTSAC 1 cut(s) 1601
NruI TCGCGA 1 cut(s) 1373
NsiI ATGCAT 1 cut(s) 834
NspV TTCGAA 1 cut(s) 416
PauI GCGCGC 2 cut(s) 1558, 1783
PciSI GCTCTTC 3 cut(s) 700, 983, 1406
PcsI WCGNNNNNNNCGW 7 cut(s) 99, 225, 231, 1182, 1248, 1517, 1658
PctI GAATGC 1 cut(s) 1868
PdmI GAANNNNTTC 2 cut(s) 455, 880
PfeI GAWTC 7 cut(s) 722, 871, 1017, 1239, 1342, 1801, 1988
PflFI GACNNNGTC 2 cut(s) 89, 545
PfoI TCCNGGA 1 cut(s) 853
PleI GAGTC 5 cut(s) 472, 536, 945, 1006, 1657
PluTI GGCGCC 1 cut(s) 903
PmaCI CACGTG 2 cut(s) 1757, 1779
PmlI CACGTG 2 cut(s) 1757, 1779
PpsI GAGTC 5 cut(s) 472, 536, 945, 1006, 1657
Ppu21I YACGTR 2 cut(s) 1757, 1779
PpuMI RGGWCCY 1 cut(s) 1573
PshAI GACNNNNGTC 1 cut(s) 1410
Psp124BI GAGCTC 3 cut(s) 338, 478, 995
Psp5II RGGWCCY 1 cut(s) 1573
Psp6I CCWGG 3 cut(s) 853, 1655, 1977
PspCI CACGTG 2 cut(s) 1757, 1779
PspGI CCWGG 3 cut(s) 853, 1655, 1977
PspN4I GGNNCC 4 cut(s) 610, 901, 1193, 1464
PspPI GGNCC 2 cut(s) 608, 1573
PspPPI RGGWCCY 1 cut(s) 1573
PstNI CAGNNNCTG 2 cut(s) 1507, 1576
PsuI RGATCY 2 cut(s) 796, 1191
PsyI GACNNNGTC 2 cut(s) 89, 545
PteI GCGCGC 2 cut(s) 1558, 1783
PvuII CAGCTG 1 cut(s) 29
RruI TCGCGA 1 cut(s) 1373
RsaI GTAC 2 cut(s) 395, 848
RsaNI GTAC 2 cut(s) 394, 847
SacI GAGCTC 3 cut(s) 338, 478, 995
SalI GTCGAC 1 cut(s) 101
SapI GCTCTTC 3 cut(s) 700, 983, 1406
Sau96I GGNCC 2 cut(s) 608, 1573
ScaI AGTACT 1 cut(s) 395
SchI GAGTC 5 cut(s) 473, 536, 946, 1006, 1658
ScrFI CCNGG 7 cut(s) 273, 855, 1657, 1914, 1915, 1951, 1979
SduI GDGCHC 5 cut(s) 338, 478, 995, 1526, 1848
SfaNI GCATC 8 cut(s) 17, 819, 923, 1054, 1191, 1278, 1327, 1702
SfcI CTRYAG 1 cut(s) 1417
SfoI GGCGCC 1 cut(s) 901
SfuI TTCGAA 1 cut(s) 416
SinI GGWCC 2 cut(s) 608, 1573
SmaI CCCGGG 1 cut(s) 1915
SmlI CTYRAG 2 cut(s) 479, 1439
SmoI CTYRAG 2 cut(s) 479, 1439
Sse9I AATT 2 cut(s) 514, 858
SspDI GGCGCC 1 cut(s) 899
SstI GAGCTC 3 cut(s) 338, 478, 995
StyD4I CCNGG 7 cut(s) 271, 853, 1655, 1912, 1913, 1949, 1977
StyI CCWWGG 1 cut(s) 1080
TaaI ACNGT 6 cut(s) 605, 637, 1256, 1925, 2005, 2046
TaiI ACGT 7 cut(s) 348, 361, 566, 824, 1176, 1759, 1781
TasI AATT 2 cut(s) 514, 858
TatI WGTACW 2 cut(s) 393, 846
TfiI GAWTC 7 cut(s) 722, 871, 1017, 1239, 1342, 1801, 1988
TscAI CASTG 3 cut(s) 76, 251, 610
TseFI GTSAC 1 cut(s) 1601
TseI GCWGC 6 cut(s) 5, 26, 1102, 1555, 1588, 1669
Tsp45I GTSAC 1 cut(s) 1601
TspDTI ATGAA 3 cut(s) 714, 800, 1889
TspGWI ACGGA 5 cut(s) 401, 535, 715, 1269, 1589
TspMI CCCGGG 1 cut(s) 1913
TspRI CASTG 3 cut(s) 76, 251, 610
Tth111I GACNNNGTC 2 cut(s) 89, 545
VneI GTGCAC 2 cut(s) 1522, 1844
VpaK11BI GGWCC 2 cut(s) 608, 1573
XapI RAATTY 2 cut(s) 514, 858
XcmI CCANNNNNNNNNTGG 1 cut(s) 979
XmaI CCCGGG 1 cut(s) 1913
XmiI GTMKAC 1 cut(s) 102
XmnI GAANNNNTTC 2 cut(s) 455, 880
ZraI GACGTC 1 cut(s) 1174
ZrmI AGTACT 1 cut(s) 395
Zsp2I ATGCAT 1 cut(s) 834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.