Rab proteins geranylgeranyltransferase component
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06540 |
| fragaria_vesca | FvH4_1g10450 |
| malus_domestica | MD02G1117700.v1.1 MD10G1065000.v1.1 MD15G1232400.v1.1 MD17G1057100.v1.1 |
| prunus_persica | Prupe.7G181700_v2.0.a1 |
| pyrus_communis | pycom02g09110 pycom10g05080 pycom15g20680 pycom17g05720 |
| rosa_chinensis | RchiOBHm_Chr2g0097311 |
| rosa_laevigata | RLG00000016716 |
| rosa_multiflora | Rmu_sc0002425.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00144790 |
| rosa_rugosa | Rorug02G0065700 |
| rosa_samantha | Rh2AG112400 Rh2BG115100 Rh2CG117200 Rh2DG116400 |
| rosa_wichuraiana | Rw2G008790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 56 |
| Acc36I | ACCTGC | 1 cut(s) | 813 |
| AccI | GTMKAC | 1 cut(s) | 766 |
| AccII | CGCG | 1 cut(s) | 508 |
| AciI | CCGC | 5 cut(s) | 225, 483, 895, 1260, 1349 |
| AclWI | GGATC | 2 cut(s) | 316, 1140 |
| AcoI | YGGCCR | 2 cut(s) | 1119, 1350 |
| AcuI | CTGAAG | 1 cut(s) | 791 |
| AfaI | GTAC | 3 cut(s) | 287, 498, 1298 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 863, 1382, 1446 |
| AflIII | ACRYGT | 2 cut(s) | 1215, 1284 |
| AgsI | TTSAA | 7 cut(s) | 20, 299, 412, 442, 574, 1153, 1394 |
| AhlI | ACTAGT | 1 cut(s) | 239 |
| AjiI | CACGTC | 1 cut(s) | 1218 |
| AjnI | CCWGG | 2 cut(s) | 420, 1121 |
| Alw21I | GWGCWC | 1 cut(s) | 270 |
| Alw26I | GTCTC | 1 cut(s) | 1595 |
| AlwI | GGATC | 2 cut(s) | 316, 1140 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 602, 928, 1009, 1256, 1573 |
| AoxI | GGCC | 7 cut(s) | 70, 365, 393, 418, 935, 1119, 1350 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 994 |
| AspS9I | GGNCC | 3 cut(s) | 365, 1033, 1048 |
| AsuC2I | CCSGG | 1 cut(s) | 317 |
| AsuHPI | GGTGA | 3 cut(s) | 260, 620, 1115 |
| AvaII | GGWCC | 2 cut(s) | 1033, 1048 |
| BalI | TGGCCA | 1 cut(s) | 1121 |
| BanII | GRGCYC | 2 cut(s) | 270, 656 |
| BbsI | GAAGAC | 2 cut(s) | 779, 1425 |
| Bbv12I | GWGCWC | 1 cut(s) | 270 |
| BccI | CCATC | 5 cut(s) | 239, 446, 599, 776, 1511 |
| BceAI | ACGGC | 3 cut(s) | 166, 695, 882 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 142, 176, 318, 352 |
| BciT130I | CCWGG | 2 cut(s) | 422, 1123 |
| BciVI | GTATCC | 2 cut(s) | 1194, 1587 |
| BclI | TGATCA | 1 cut(s) | 736 |
| BcnI | CCSGG | 1 cut(s) | 317 |
| BcoDI | GTCTC | 1 cut(s) | 1595 |
| BcuI | ACTAGT | 1 cut(s) | 239 |
| BfaI | CTAG | 3 cut(s) | 240, 1191, 1643 |
| BfuAI | ACCTGC | 1 cut(s) | 813 |
| BfuI | GTATCC | 2 cut(s) | 1194, 1587 |
| BglII | AGATCT | 1 cut(s) | 1193 |
| Bme1390I | CCNGG | 3 cut(s) | 317, 422, 1123 |
| Bme18I | GGWCC | 2 cut(s) | 1033, 1048 |
| BmgBI | CACGTC | 1 cut(s) | 1218 |
| BmgT120I | GGNCC | 3 cut(s) | 365, 1033, 1048 |
| BmiI | GGNNCC | 4 cut(s) | 67, 1035, 1050, 1402 |
| BmrFI | CCNGG | 3 cut(s) | 317, 422, 1123 |
| BmsI | GCATC | 2 cut(s) | 1243, 1309 |
| BpiI | GAAGAC | 2 cut(s) | 779, 1425 |
| BpmI | CTGGAG | 1 cut(s) | 110 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1206 |
| BpuMI | CCSGG | 1 cut(s) | 317 |
| Bsa29I | ATCGAT | 1 cut(s) | 701 |
| BsaAI | YACGTR | 1 cut(s) | 1241 |
| BsaBI | GATNNNNATC | 2 cut(s) | 735, 1521 |
| BsaJI | CCNNGG | 4 cut(s) | 315, 368, 421, 1122 |
| BsaWI | WCCGGW | 1 cut(s) | 76 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 863, 1382, 1446 |
| Bse118I | RCCGGY | 1 cut(s) | 68 |
| Bse1I | ACTGG | 2 cut(s) | 938, 1058 |
| Bse3DI | GCAATG | 3 cut(s) | 717, 729, 1052 |
| Bse8I | GATNNNNATC | 2 cut(s) | 735, 1521 |
| BseBI | CCWGG | 2 cut(s) | 422, 1123 |
| BseCI | ATCGAT | 1 cut(s) | 701 |
| BseDI | CCNNGG | 4 cut(s) | 315, 368, 421, 1122 |
| BseGI | GGATG | 4 cut(s) | 475, 619, 792, 1552 |
| BseJI | GATNNNNATC | 2 cut(s) | 735, 1521 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 863, 1382, 1446 |
| BseMI | GCAATG | 3 cut(s) | 717, 729, 1052 |
| BseMII | CTCAG | 1 cut(s) | 1197 |
| BseNI | ACTGG | 2 cut(s) | 938, 1058 |
| BseRI | GAGGAG | 1 cut(s) | 653 |
| Bsh1236I | CGCG | 1 cut(s) | 508 |
| BshFI | GGCC | 7 cut(s) | 72, 367, 395, 420, 937, 1121, 1352 |
| BshVI | ATCGAT | 1 cut(s) | 701 |
| BsiHKAI | GWGCWC | 1 cut(s) | 270 |
| BsiSI | CCGG | 3 cut(s) | 69, 77, 317 |
| BslFI | GGGAC | 1 cut(s) | 1034 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 863, 1382, 1446 |
| BsmAI | GTCTC | 1 cut(s) | 1595 |
| BsmFI | GGGAC | 1 cut(s) | 1034 |
| BsmI | GAATGC | 3 cut(s) | 334, 1363, 1589 |
| BsnI | GGCC | 7 cut(s) | 72, 367, 395, 420, 937, 1121, 1352 |
| Bsp1286I | GDGCHC | 2 cut(s) | 270, 656 |
| Bsp143I | GATC | 6 cut(s) | 321, 736, 1145, 1193, 1470, 1537 |
| Bsp68I | TCGCGA | 1 cut(s) | 508 |
| BspACI | CCGC | 5 cut(s) | 225, 483, 895, 1260, 1349 |
| BspANI | GGCC | 7 cut(s) | 72, 367, 395, 420, 937, 1121, 1352 |
| BspCNI | CTCAG | 1 cut(s) | 1198 |
| BspDI | ATCGAT | 1 cut(s) | 701 |
| BspFNI | CGCG | 1 cut(s) | 508 |
| BspLI | GGNNCC | 4 cut(s) | 67, 1035, 1050, 1402 |
| BspMI | ACCTGC | 1 cut(s) | 813 |
| BspPI | GGATC | 2 cut(s) | 316, 1140 |
| BspQI | GCTCTTC | 3 cut(s) | 1368, 1568, 1626 |
| BsrDI | GCAATG | 3 cut(s) | 717, 729, 1052 |
| BsrFI | RCCGGY | 1 cut(s) | 68 |
| BsrI | ACTGG | 2 cut(s) | 938, 1058 |
| BssAI | RCCGGY | 1 cut(s) | 68 |
| BssECI | CCNNGG | 4 cut(s) | 315, 368, 421, 1122 |
| BssMI | GATC | 6 cut(s) | 321, 736, 1145, 1193, 1470, 1537 |
| BssNAI | GTATAC | 1 cut(s) | 767 |
| Bst1107I | GTATAC | 1 cut(s) | 767 |
| Bst2UI | CCWGG | 2 cut(s) | 422, 1123 |
| Bst4CI | ACNGT | 4 cut(s) | 121, 1048, 1408, 1555 |
| Bst6I | CTCTTC | 4 cut(s) | 1368, 1568, 1614, 1626 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 311 |
| BstBAI | YACGTR | 1 cut(s) | 1241 |
| BstC8I | GCNNGC | 4 cut(s) | 112, 229, 510, 1258 |
| BstDEI | CTNAG | 1 cut(s) | 1206 |
| BstF5I | GGATG | 4 cut(s) | 475, 619, 792, 1552 |
| BstFNI | CGCG | 1 cut(s) | 508 |
| BstKTI | GATC | 6 cut(s) | 324, 739, 1148, 1196, 1473, 1540 |
| BstMAI | GTCTC | 1 cut(s) | 1595 |
| BstMBI | GATC | 6 cut(s) | 321, 736, 1145, 1193, 1470, 1537 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 98, 107, 311, 392, 583, 842, 1358 |
| BstNI | CCWGG | 2 cut(s) | 422, 1123 |
| BstNSI | RCATGY | 4 cut(s) | 209, 1288, 1349, 1456 |
| BstSCI | CCNGG | 3 cut(s) | 315, 420, 1121 |
| BstUI | CGCG | 1 cut(s) | 508 |
| BstV2I | GAAGAC | 2 cut(s) | 779, 1425 |
| BstX2I | RGATCY | 3 cut(s) | 321, 1145, 1193 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 724, 1241 |
| BstYI | RGATCY | 3 cut(s) | 321, 1145, 1193 |
| BstZ17I | GTATAC | 1 cut(s) | 767 |
| Bsu15I | ATCGAT | 1 cut(s) | 701 |
| BsuI | GTATCC | 2 cut(s) | 1194, 1587 |
| BsuRI | GGCC | 7 cut(s) | 72, 367, 395, 420, 937, 1121, 1352 |
| BsuTUI | ATCGAT | 1 cut(s) | 701 |
| BtrI | CACGTC | 1 cut(s) | 1218 |
| BtsCI | GGATG | 4 cut(s) | 475, 619, 792, 1552 |
| BtuMI | TCGCGA | 1 cut(s) | 508 |
| BveI | ACCTGC | 1 cut(s) | 813 |
| Cac8I | GCNNGC | 4 cut(s) | 112, 229, 510, 1258 |
| CaiI | CAGNNNCTG | 5 cut(s) | 602, 928, 1009, 1256, 1573 |
| Cfr10I | RCCGGY | 1 cut(s) | 68 |
| Cfr13I | GGNCC | 3 cut(s) | 365, 1033, 1048 |
| ClaI | ATCGAT | 1 cut(s) | 701 |
| Csp6I | GTAC | 3 cut(s) | 286, 497, 1297 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 949, 984 |
| CviAII | CATG | 7 cut(s) | 206, 869, 1285, 1346, 1354, 1453, 1510 |
| CviQI | GTAC | 3 cut(s) | 286, 497, 1297 |
| DdeI | CTNAG | 1 cut(s) | 1206 |
| DpnI | GATC | 6 cut(s) | 323, 738, 1147, 1195, 1472, 1539 |
| DpnII | GATC | 6 cut(s) | 321, 736, 1145, 1193, 1470, 1537 |
| DraI | TTTAAA | 1 cut(s) | 523 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 56 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 56 |
| EaeI | YGGCCR | 2 cut(s) | 1119, 1350 |
| Eam1104I | CTCTTC | 4 cut(s) | 1368, 1568, 1614, 1626 |
| EarI | CTCTTC | 4 cut(s) | 1368, 1568, 1614, 1626 |
| Ecl136II | GAGCTC | 1 cut(s) | 268 |
| Eco24I | GRGCYC | 2 cut(s) | 270, 656 |
| Eco47I | GGWCC | 2 cut(s) | 1033, 1048 |
| Eco53kI | GAGCTC | 1 cut(s) | 268 |
| Eco57I | CTGAAG | 1 cut(s) | 791 |
| EcoICRI | GAGCTC | 1 cut(s) | 268 |
| EcoRII | CCWGG | 2 cut(s) | 420, 1121 |
| EcoT38I | GRGCYC | 2 cut(s) | 270, 656 |
| FaeI | CATG | 7 cut(s) | 209, 872, 1288, 1349, 1357, 1456, 1513 |
| FaqI | GGGAC | 1 cut(s) | 1034 |
| FatI | CATG | 7 cut(s) | 205, 868, 1284, 1345, 1353, 1452, 1509 |
| FauI | CCCGC | 1 cut(s) | 476 |
| FbaI | TGATCA | 1 cut(s) | 736 |
| FblI | GTMKAC | 1 cut(s) | 766 |
| FokI | GGATG | 4 cut(s) | 482, 626, 799, 1559 |
| FriOI | GRGCYC | 2 cut(s) | 270, 656 |
| FspBI | CTAG | 3 cut(s) | 240, 1191, 1643 |
| GsuI | CTGGAG | 1 cut(s) | 110 |
| HaeIII | GGCC | 7 cut(s) | 72, 367, 395, 420, 937, 1121, 1352 |
| HapII | CCGG | 3 cut(s) | 69, 77, 317 |
| Hin1II | CATG | 7 cut(s) | 209, 872, 1288, 1349, 1357, 1456, 1513 |
| HincII | GTYRAC | 1 cut(s) | 664 |
| HindII | GTYRAC | 1 cut(s) | 664 |
| HindIII | AAGCTT | 2 cut(s) | 575, 885 |
| HinfI | GANTC | 8 cut(s) | 8, 80, 345, 503, 538, 553, 1006, 1015 |
| HpaII | CCGG | 3 cut(s) | 69, 77, 317 |
| HphI | GGTGA | 3 cut(s) | 260, 620, 1115 |
| Hpy166II | GTNNAC | 2 cut(s) | 664, 767 |
| Hpy188I | TCNGA | 4 cut(s) | 604, 637, 1005, 1226 |
| Hpy8I | GTNNAC | 2 cut(s) | 664, 767 |
| HpyAV | CCTTC | 5 cut(s) | 202, 927, 1051, 1091, 1617 |
| HpyCH4III | ACNGT | 4 cut(s) | 121, 1048, 1408, 1555 |
| HpyCH4IV | ACGT | 4 cut(s) | 294, 793, 1217, 1240 |
| HpyCH4V | TGCA | 6 cut(s) | 92, 260, 305, 329, 722, 836 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 98, 107, 311, 392, 583, 842, 1358 |
| HpyF3I | CTNAG | 1 cut(s) | 1206 |
| HpySE526I | ACGT | 4 cut(s) | 294, 793, 1217, 1240 |
| Hsp92II | CATG | 7 cut(s) | 209, 872, 1288, 1349, 1357, 1456, 1513 |
| Ksp22I | TGATCA | 1 cut(s) | 736 |
| Kzo9I | GATC | 6 cut(s) | 321, 736, 1145, 1193, 1470, 1537 |
| LguI | GCTCTTC | 3 cut(s) | 1368, 1568, 1626 |
| LmnI | GCTCC | 3 cut(s) | 265, 842, 1449 |
| LweI | GCATC | 2 cut(s) | 1243, 1309 |
| MaeI | CTAG | 3 cut(s) | 240, 1191, 1643 |
| MaeII | ACGT | 4 cut(s) | 294, 793, 1217, 1240 |
| MaeIII | GTNAC | 3 cut(s) | 232, 789, 1338 |
| MalI | GATC | 6 cut(s) | 323, 738, 1147, 1195, 1472, 1539 |
| MboI | GATC | 6 cut(s) | 321, 736, 1145, 1193, 1470, 1537 |
| MboII | GAAGA | 9 cut(s) | 32, 562, 562, 784, 1355, 1430, 1555, 1631, 1643 |
| MflI | RGATCY | 3 cut(s) | 321, 1145, 1193 |
| MhlI | GDGCHC | 2 cut(s) | 270, 656 |
| MlsI | TGGCCA | 1 cut(s) | 1121 |
| MluCI | AATT | 2 cut(s) | 87, 199 |
| MluNI | TGGCCA | 1 cut(s) | 1121 |
| MlyI | GAGTC | 4 cut(s) | 89, 497, 547, 1024 |
| Mox20I | TGGCCA | 1 cut(s) | 1121 |
| MroXI | GAANNNNTTC | 1 cut(s) | 994 |
| MscI | TGGCCA | 1 cut(s) | 1121 |
| MseI | TTAA | 5 cut(s) | 522, 543, 671, 909, 1098 |
| MslI | CAYNNNNRTG | 4 cut(s) | 354, 722, 1289, 1508 |
| Msp20I | TGGCCA | 1 cut(s) | 1121 |
| MspA1I | CMGCKG | 1 cut(s) | 1024 |
| MspI | CCGG | 3 cut(s) | 69, 77, 317 |
| MspR9I | CCNGG | 3 cut(s) | 317, 422, 1123 |
| Mva1269I | GAATGC | 3 cut(s) | 334, 1363, 1589 |
| MvaI | CCWGG | 2 cut(s) | 422, 1123 |
| MvnI | CGCG | 1 cut(s) | 508 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 98, 107, 311, 392, 583, 842, 1358 |
| NciI | CCSGG | 1 cut(s) | 317 |
| NdeII | GATC | 6 cut(s) | 321, 736, 1145, 1193, 1470, 1537 |
| NlaIII | CATG | 7 cut(s) | 209, 872, 1288, 1349, 1357, 1456, 1513 |
| NlaIV | GGNNCC | 4 cut(s) | 67, 1035, 1050, 1402 |
| NmeAIII | GCCGAG | 1 cut(s) | 393 |
| NmuCI | GTSAC | 1 cut(s) | 789 |
| NruI | TCGCGA | 1 cut(s) | 508 |
| NspI | RCATGY | 4 cut(s) | 209, 1288, 1349, 1456 |
| PciI | ACATGT | 1 cut(s) | 1284 |
| PciSI | GCTCTTC | 3 cut(s) | 1368, 1568, 1626 |
| PctI | GAATGC | 3 cut(s) | 334, 1363, 1589 |
| PdmI | GAANNNNTTC | 1 cut(s) | 994 |
| PfeI | GAWTC | 4 cut(s) | 8, 345, 553, 1006 |
| PleI | GAGTC | 4 cut(s) | 88, 497, 546, 1023 |
| PpsI | GAGTC | 4 cut(s) | 88, 497, 546, 1023 |
| Ppu21I | YACGTR | 1 cut(s) | 1241 |
| PscI | ACATGT | 1 cut(s) | 1284 |
| Psp124BI | GAGCTC | 1 cut(s) | 270 |
| Psp6I | CCWGG | 2 cut(s) | 420, 1121 |
| PspGI | CCWGG | 2 cut(s) | 420, 1121 |
| PspN4I | GGNNCC | 4 cut(s) | 67, 1035, 1050, 1402 |
| PspPI | GGNCC | 3 cut(s) | 365, 1033, 1048 |
| PstNI | CAGNNNCTG | 5 cut(s) | 602, 928, 1009, 1256, 1573 |
| PsuI | RGATCY | 3 cut(s) | 321, 1145, 1193 |
| PvuII | CAGCTG | 1 cut(s) | 1024 |
| RruI | TCGCGA | 1 cut(s) | 508 |
| RsaI | GTAC | 3 cut(s) | 287, 498, 1298 |
| RsaNI | GTAC | 3 cut(s) | 286, 497, 1297 |
| RseI | CAYNNNNRTG | 4 cut(s) | 354, 722, 1289, 1508 |
| SacI | GAGCTC | 1 cut(s) | 270 |
| SapI | GCTCTTC | 3 cut(s) | 1368, 1568, 1626 |
| SaqAI | TTAA | 5 cut(s) | 522, 543, 671, 909, 1098 |
| Sau3AI | GATC | 6 cut(s) | 321, 736, 1145, 1193, 1470, 1537 |
| Sau96I | GGNCC | 3 cut(s) | 365, 1033, 1048 |
| SchI | GAGTC | 4 cut(s) | 89, 497, 547, 1024 |
| ScrFI | CCNGG | 3 cut(s) | 317, 422, 1123 |
| SduI | GDGCHC | 2 cut(s) | 270, 656 |
| SfaNI | GCATC | 2 cut(s) | 1243, 1309 |
| SinI | GGWCC | 2 cut(s) | 1033, 1048 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 354, 722, 1289, 1508 |
| SpeI | ACTAGT | 1 cut(s) | 239 |
| Sse9I | AATT | 2 cut(s) | 87, 199 |
| SsiI | CCGC | 5 cut(s) | 225, 483, 895, 1260, 1349 |
| SspMI | CTAG | 3 cut(s) | 240, 1191, 1643 |
| SstI | GAGCTC | 1 cut(s) | 270 |
| StyD4I | CCNGG | 3 cut(s) | 315, 420, 1121 |
| TaaI | ACNGT | 4 cut(s) | 121, 1048, 1408, 1555 |
| TaiI | ACGT | 4 cut(s) | 297, 796, 1220, 1243 |
| TaqI | TCGA | 4 cut(s) | 338, 626, 701, 1483 |
| TasI | AATT | 2 cut(s) | 87, 199 |
| TatI | WGTACW | 2 cut(s) | 285, 1296 |
| TauI | GCSGC | 2 cut(s) | 897, 1352 |
| TfiI | GAWTC | 4 cut(s) | 8, 345, 553, 1006 |
| Tru1I | TTAA | 5 cut(s) | 522, 543, 671, 909, 1098 |
| Tru9I | TTAA | 5 cut(s) | 522, 543, 671, 909, 1098 |
| TseFI | GTSAC | 1 cut(s) | 789 |
| Tsp45I | GTSAC | 1 cut(s) | 789 |
| TspDTI | ATGAA | 6 cut(s) | 633, 1104, 1370, 1503, 1563, 1644 |
| TspGWI | ACGGA | 1 cut(s) | 1266 |
| VpaK11BI | GGWCC | 2 cut(s) | 1033, 1048 |
| XbaI | TCTAGA | 1 cut(s) | 1642 |
| XceI | RCATGY | 4 cut(s) | 209, 1288, 1349, 1456 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1241 |
| XmiI | GTMKAC | 1 cut(s) | 766 |
| XmnI | GAANNNNTTC | 1 cut(s) | 994 |
| XspI | CTAG | 3 cut(s) | 240, 1191, 1643 |