Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0009986

Physical Location & Seq

Genomic Coordinates Reverse (-)

4646341 .. 4650640

Gene Structure 4300 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1057100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGAGTCAACTCTTTGATGACCGCATTCCTATCACGCCCAGCACCTTTGACCTTATTGTTATTGGAACGGGCCTCCCTGGATCCGTGATTGCTGCCGCAGCTTCTACTGCCGGAAAAGCTGTTCTTCACCTTGACACTAACCAATTTTACGGCGGCCACTTCGCCTCTCTTCCCCTGGATGATCTCTTTCCCTTCCTAAATTCTCATGCTTCCCCACCCTCCTCCTCCTCCACAACCACTACCACCACCACAATTACGGGACATGATGATTACACTGCCTTACCCCTCACCCGGCGCTTGCTCTACTCCGACATTGAGACGGTTACCTATGCCCCTCAAGCCCTTGCCCAGCATAACCCCAAAAGATTCTACATTGACCTTAGCGGGCCCAAGGTTTTGTTTCTTGCAGACAAAGCCACGGACCTTCTGTGGAGATCGGGCGTGTCACCATTTTTGTGTTTCAAGGGCATTGAAATGAAGTCCATTTACGATGATATTGGGGAGTTGTGGAACGTTCCAGACTCTCGAGTAGCAATATTCAAAGACAAGAGGCTAAGCCTCATGGAGAAGAATAAGCTGATGAGGTTCTTCAAGCTTGTTTGGCAGCACCTGGAAGCAGCCTCTGACGAACAAGGGAGTGAAGGAAATAGTGAGAGTAGGAAAATTTCAGATGAAGATTTGGAGAGTCCCTTCGTTGATTTCTTAAACAGAATGGAATTGCCACACAGGATCAAATCAATTATTTTGTATGCCATTGCCATGGTAGACTATGATCAAGACGACCTGGAAGCTTGTAAAAGTATACTTAAGACAAGAGATGGGATCGAGCGGTTAGCAATCTTCTACAAATCGAGGTTGACAAATGCACCTGAGGCTATGATTTATCCTATGTATGGTCATGGGAACTTATCAGGAGTTATAAGCCGCCGCGCTGCTGTTAAAGGCTGCGTTTGTGCTCAACGAGTTCCAGTTGCCGTGCTTACGGACAAGGACAGTGGCCAATATAAAGGTGTGAGATTAGCTTCTGGTCAGAATTTGTATAGTGATCAGCTAGTTATGGATCCAACTTTCAAGGTCCCATCGCTGCCAATTTCATCCCCACCAGACGTGAGAGCAAGTCCTCAAGTTTTAAGTCTGAAAGATGATAAACGAAAGGTGGCTAGGGGAATATGTATTACAACCAGTTCACTGAAGCCAGATATATCAAACTGTTTGCTTGTATATCCTCCAGGATCTTTGTACCCTGAGCAAGAAGCTTCGATCCGGGCAATCCAAATAGGTGGAAGTTCGGCTGAAGTTTGTCCAAAGGGCATGTTTGTTGTGTACCTTTCTGTTTTATGCGATGACGCCAAACAAGGGAAAATGTTGCTACGTGATGCCATGAATGCGCTTCTCAAACTTGCGCTTTCTGGAAACCCTTATGATCGCACTCTTGATAGTGAAGATGCAGAAGTAAAACCTACTTTGTTATGGAGCATGTTGTATGTTCAGGAGCTGACTACGGATGAACAGGGTTATTTCCTCTCAACTCCGATGCCAGATGCGAATCTGGACTACAATGATCTCATAGATTCAACTGCGGTGCTTTTCCAGACGTTGTATCCACATGAAGAATTCTTTCCAGGGACACACGCGGTTGATAATTTGGAGGATGATGGCAGTGACGTTGATGCCCCGAAAGGGACTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005968 GO:0008150 GO:0009889 GO:0009893 GO:0010556 GO:0010604 GO:0017016 GO:0017137 GO:0019222 GO:0019899 GO:0031267 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0032991 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051020 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0080090 GO:1902494 GO:1990234 GO:2000112 GO:2000539 GO:2000541

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GDI

Protein Analysis

564

Amino Acids

62.16

Weight (kDa)

4.99

Isoelectric Point (pI)

42.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDI	PF00996	15 - 74	1.7e-09	GDP dissociation inhibitor
GDI	PF00996	121 - 359	5.5e-16	GDP dissociation inhibitor
RAE1_2_domI_C	PF22603	386 - 496	2.2e-07	RAE1/2 domain I, C-terminal region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009986)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06540
fragaria_vesca	FvH4_1g10450
malus_domestica	MD02G1117700.v1.1 MD10G1065000.v1.1 MD15G1232400.v1.1 MD17G1057100.v1.1
prunus_persica	Prupe.7G181700_v2.0.a1
pyrus_communis	pycom02g09110 pycom10g05080 pycom15g20680 pycom17g05720
rosa_chinensis	RchiOBHm_Chr2g0097311
rosa_laevigata	RLG00000016716
rosa_multiflora	Rmu_sc0002425.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144790
rosa_rugosa	Rorug02G0065700
rosa_samantha	Rh2AG112400 Rh2BG115100 Rh2CG117200 Rh2DG116400
rosa_wichuraiana	Rw2G008790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	920
AccBSI	CCGCTC	1 cut(s)	829
AccI	GTMKAC	2 cut(s)	765, 802
AccII	CGCG	2 cut(s)	930, 1634
AciI	CCGC	9 cut(s)	22, 96, 153, 384, 829, 925, 928, 1580, 1634
AclI	AACGTT	1 cut(s)	513
AclWI	GGATC	8 cut(s)	75, 88, 737, 830, 1055, 1068, 1240, 1255
AcoI	YGGCCR	2 cut(s)	154, 997
AcsI	RAATTY	4 cut(s)	199, 663, 1033, 1613
AcuI	CTGAAG	2 cut(s)	1211, 1314
AcyI	GRCGYC	1 cut(s)	1347
AfaI	GTAC	2 cut(s)	1241, 1325
AfiI	CCNNNNNNNGG	4 cut(s)	291, 893, 1356, 1680
AflII	CTTAAG	1 cut(s)	806
AgsI	TTSAA	6 cut(s)	463, 473, 541, 592, 1072, 1575
AjiI	CACGTC	1 cut(s)	1108
AjnI	CCWGG	6 cut(s)	76, 174, 609, 783, 1228, 1621
AloI	GAACNNNNNNTCC	2 cut(s)	105, 137
AluBI	AGCT	9 cut(s)	101, 119, 577, 595, 791, 1022, 1051, 1256, 1495
AluI	AGCT	9 cut(s)	101, 119, 577, 595, 791, 1022, 1051, 1256, 1495
Alw21I	GWGCWC	1 cut(s)	958
Alw26I	GTCTC	1 cut(s)	311
AlwI	GGATC	8 cut(s)	75, 88, 737, 830, 1055, 1068, 1240, 1255
AlwNI	CAGNNNCTG	3 cut(s)	610, 623, 1495
Ama87I	CYCGRG	1 cut(s)	525
AoxI	GGCC	4 cut(s)	70, 154, 386, 997
ApaI	GGGCCC	1 cut(s)	390
ApeKI	GCWGC	7 cut(s)	92, 98, 604, 617, 932, 945, 1084
ApoI	RAATTY	4 cut(s)	199, 663, 1033, 1613
Asp700I	GAANNNNTTC	1 cut(s)	1617
AspLEI	GCGC	4 cut(s)	297, 932, 1390, 1405
AspS9I	GGNCC	5 cut(s)	70, 386, 387, 421, 1075
AsuC2I	CCSGG	2 cut(s)	292, 1265
AsuHPI	GGTGA	3 cut(s)	119, 280, 438
AvaI	CYCGRG	1 cut(s)	525
AvaII	GGWCC	2 cut(s)	421, 1075
AxyI	CCTNAGG	1 cut(s)	870
BaeGI	GKGCMC	1 cut(s)	390
BalI	TGGCCA	1 cut(s)	999
BamHI	GGATCC	2 cut(s)	80, 1060
BanII	GRGCYC	1 cut(s)	390
BarI	GAAGNNNNNNTAC	2 cut(s)	470, 502
Bbv12I	GWGCWC	1 cut(s)	958
BbvI	GCAGC	7 cut(s)	79, 110, 616, 629, 919, 932, 1071
BccI	CCATC	3 cut(s)	812, 1087, 1649
BceAI	ACGGC	2 cut(s)	166, 959
BciT130I	CCWGG	6 cut(s)	78, 176, 611, 785, 1230, 1623
BciVI	GTATCC	1 cut(s)	1611
BclI	TGATCA	2 cut(s)	772, 1045
BcnI	CCSGG	2 cut(s)	292, 1265
BcoDI	GTCTC	1 cut(s)	311
BfaI	CTAG	2 cut(s)	1052, 1161
BfoI	RGCGCY	1 cut(s)	298
BfrI	CTTAAG	1 cut(s)	806
BfuI	GTATCC	1 cut(s)	1611
BlpI	GCTNAGC	1 cut(s)	554
Bme1390I	CCNGG	8 cut(s)	78, 176, 292, 611, 785, 1230, 1265, 1623
Bme18I	GGWCC	2 cut(s)	421, 1075
BmeT110I	CYCGRG	1 cut(s)	525
BmgBI	CACGTC	1 cut(s)	1108
BmgT120I	GGNCC	5 cut(s)	70, 386, 387, 421, 1075
BmiI	GGNNCC	4 cut(s)	82, 388, 1062, 1077
BmrFI	CCNGG	8 cut(s)	78, 176, 292, 611, 785, 1230, 1265, 1623
BmsI	GCATC	5 cut(s)	1366, 1435, 1524, 1531, 1660
BpmI	CTGGAG	1 cut(s)	1212
Bpu10I	CCTNAGC	2 cut(s)	380, 1245
Bpu1102I	GCTNAGC	1 cut(s)	554
BpuEI	CTTGAG	2 cut(s)	321, 1107
BpuMI	CCSGG	2 cut(s)	292, 1265
BsaAI	YACGTR	1 cut(s)	1373
BsaBI	GATNNNNATC	1 cut(s)	1545
BsaHI	GRCGYC	1 cut(s)	1347
BsaJI	CCNNGG	6 cut(s)	76, 174, 390, 417, 759, 1622
Bsc4I	CCNNNNNNNGG	4 cut(s)	291, 893, 1356, 1680
Bse1I	ACTGG	2 cut(s)	968, 1182
Bse21I	CCTNAGG	1 cut(s)	870
Bse3DI	GCAATG	1 cut(s)	753
Bse8I	GATNNNNATC	1 cut(s)	1545
BseBI	CCWGG	6 cut(s)	78, 176, 611, 785, 1230, 1623
BseDI	CCNNGG	6 cut(s)	76, 174, 390, 417, 759, 1622
BseGI	GGATG	4 cut(s)	184, 1094, 1510, 1657
BseJI	GATNNNNATC	1 cut(s)	1545
BseLI	CCNNNNNNNGG	4 cut(s)	291, 893, 1356, 1680
BseMI	GCAATG	1 cut(s)	753
BseMII	CTCAG	3 cut(s)	861, 1236, 1677
BseNI	ACTGG	2 cut(s)	968, 1182
BseRI	GAGGAG	3 cut(s)	211, 214, 217
BseSI	GKGCMC	1 cut(s)	390
BseXI	GCAGC	7 cut(s)	79, 110, 616, 629, 919, 932, 1071
BseYI	CCCAGC	2 cut(s)	38, 348
Bsh1236I	CGCG	2 cut(s)	930, 1634
BshFI	GGCC	4 cut(s)	72, 156, 388, 999
BsiHKAI	GWGCWC	1 cut(s)	958
BsiHKCI	CYCGRG	1 cut(s)	525
BsiSI	CCGG	3 cut(s)	111, 292, 1264
BslFI	GGGAC	4 cut(s)	273, 672, 1061, 1639
BslI	CCNNNNNNNGG	4 cut(s)	291, 893, 1356, 1680
BsmAI	GTCTC	1 cut(s)	311
BsmBI	CGTCTC	1 cut(s)	311
BsmFI	GGGAC	4 cut(s)	273, 672, 1061, 1639
BsmI	GAATGC	2 cut(s)	24, 1390
BsnI	GGCC	4 cut(s)	72, 156, 388, 999
BsoBI	CYCGRG	1 cut(s)	525
Bsp120I	GGGCCC	1 cut(s)	386
Bsp1286I	GDGCHC	2 cut(s)	390, 958
Bsp1720I	GCTNAGC	1 cut(s)	554
Bsp19I	CCATGG	1 cut(s)	759
BspACI	CCGC	9 cut(s)	22, 96, 153, 384, 829, 925, 928, 1580, 1634
BspANI	GGCC	4 cut(s)	72, 156, 388, 999
BspCNI	CTCAG	3 cut(s)	862, 1237, 1678
BspFNI	CGCG	2 cut(s)	930, 1634
BspLI	GGNNCC	4 cut(s)	82, 388, 1062, 1077
BspPI	GGATC	8 cut(s)	75, 88, 737, 830, 1055, 1068, 1240, 1255
BspTI	CTTAAG	1 cut(s)	806
BsrBI	CCGCTC	1 cut(s)	829
BsrDI	GCAATG	1 cut(s)	753
BsrI	ACTGG	2 cut(s)	968, 1182
BssECI	CCNNGG	6 cut(s)	76, 174, 390, 417, 759, 1622
BssNAI	GTATAC	1 cut(s)	803
BssNI	GRCGYC	1 cut(s)	1347
BssT1I	CCWWGG	2 cut(s)	390, 759
Bst1107I	GTATAC	1 cut(s)	803
Bst2UI	CCWGG	6 cut(s)	78, 176, 611, 785, 1230, 1623
Bst4CI	ACNGT	3 cut(s)	322, 995, 1211
Bst6I	CTCTTC	1 cut(s)	174
BstACI	GRCGYC	1 cut(s)	1347
BstAFI	CTTAAG	1 cut(s)	806
BstBAI	YACGTR	1 cut(s)	1373
BstC8I	GCNNGC	2 cut(s)	299, 386
BstDEI	CTNAG	5 cut(s)	380, 554, 870, 1245, 1686
BstDSI	CCRYGG	2 cut(s)	417, 759
BstEII	GGTNACC	1 cut(s)	322
BstF5I	GGATG	4 cut(s)	184, 1094, 1510, 1657
BstFNI	CGCG	2 cut(s)	930, 1634
BstH2I	RGCGCY	1 cut(s)	298
BstHHI	GCGC	4 cut(s)	297, 932, 1390, 1405
BstMAI	GTCTC	1 cut(s)	311
BstMWI	GCNNNNNNNGC	8 cut(s)	98, 107, 116, 338, 413, 601, 872, 1385
BstNI	CCWGG	6 cut(s)	78, 176, 611, 785, 1230, 1623
BstNSI	RCATGY	2 cut(s)	1315, 1480
BstPI	GGTNACC	1 cut(s)	322
BstSCI	CCNGG	8 cut(s)	76, 174, 290, 609, 783, 1228, 1263, 1621
BstSLI	GKGCMC	1 cut(s)	390
BstUI	CGCG	2 cut(s)	930, 1634
BstV1I	GCAGC	7 cut(s)	79, 110, 616, 629, 919, 932, 1071
BstX2I	RGATCY	3 cut(s)	80, 1060, 1232
BstXI	CCANNNNNNTGG	2 cut(s)	760, 1280
BstYI	RGATCY	3 cut(s)	80, 1060, 1232
BstZ17I	GTATAC	1 cut(s)	803
Bsu36I	CCTNAGG	1 cut(s)	870
BsuI	GTATCC	1 cut(s)	1611
BsuRI	GGCC	4 cut(s)	72, 156, 388, 999
BtgI	CCRYGG	2 cut(s)	417, 759
BtgZI	GCGATG	2 cut(s)	1065, 1356
BtrI	CACGTC	1 cut(s)	1108
BtsCI	GGATG	4 cut(s)	184, 1094, 1510, 1657
BtsI	GCAGTG	2 cut(s)	273, 1666
BtsIMutI	CAGTG	4 cut(s)	273, 1000, 1187, 1666
Cac8I	GCNNGC	2 cut(s)	299, 386
CaiI	CAGNNNCTG	3 cut(s)	610, 623, 1495
CfoI	GCGC	4 cut(s)	297, 932, 1390, 1405
Cfr13I	GGNCC	5 cut(s)	70, 386, 387, 421, 1075
CseI	GACGC	1 cut(s)	1355
Csp6I	GTAC	2 cut(s)	1240, 1324
CspCI	CAANNNNNGTGG	2 cut(s)	976, 1011
CviAII	CATG	9 cut(s)	206, 263, 562, 760, 899, 1312, 1381, 1477, 1607
CviQI	GTAC	2 cut(s)	1240, 1324
DdeI	CTNAG	5 cut(s)	380, 554, 870, 1245, 1686
EaeI	YGGCCR	2 cut(s)	154, 997
Eam1104I	CTCTTC	1 cut(s)	174
EarI	CTCTTC	1 cut(s)	174
Eco130I	CCWWGG	2 cut(s)	390, 759
Eco24I	GRGCYC	1 cut(s)	390
Eco47I	GGWCC	2 cut(s)	421, 1075
Eco57I	CTGAAG	2 cut(s)	1211, 1314
Eco81I	CCTNAGG	1 cut(s)	870
Eco88I	CYCGRG	1 cut(s)	525
Eco91I	GGTNACC	1 cut(s)	322
EcoO109I	RGGNCCY	1 cut(s)	1075
EcoO65I	GGTNACC	1 cut(s)	322
EcoRI	GAATTC	1 cut(s)	1613
EcoRII	CCWGG	6 cut(s)	76, 174, 609, 783, 1228, 1621
EcoT14I	CCWWGG	2 cut(s)	390, 759
EcoT38I	GRGCYC	1 cut(s)	390
ErhI	CCWWGG	2 cut(s)	390, 759
Esp3I	CGTCTC	1 cut(s)	311
FaeI	CATG	9 cut(s)	209, 266, 565, 763, 902, 1315, 1384, 1480, 1610
FalI	AAGNNNNNCTT	2 cut(s)	108, 140
FaqI	GGGAC	4 cut(s)	273, 672, 1061, 1639
FatI	CATG	9 cut(s)	205, 262, 561, 759, 898, 1311, 1380, 1476, 1606
FauI	CCCGC	1 cut(s)	377
FbaI	TGATCA	2 cut(s)	772, 1045
FblI	GTMKAC	2 cut(s)	765, 802
FokI	GGATG	4 cut(s)	191, 1081, 1517, 1664
FriOI	GRGCYC	1 cut(s)	390
FspBI	CTAG	2 cut(s)	1052, 1161
GlaI	GCGC	4 cut(s)	296, 931, 1389, 1404
GsaI	CCCAGC	2 cut(s)	42, 352
GsuI	CTGGAG	1 cut(s)	1212
HaeII	RGCGCY	1 cut(s)	298
HaeIII	GGCC	4 cut(s)	72, 156, 388, 999
HapII	CCGG	3 cut(s)	111, 292, 1264
HgaI	GACGC	1 cut(s)	1355
HhaI	GCGC	4 cut(s)	297, 932, 1390, 1405
Hin1I	GRCGYC	1 cut(s)	1347
Hin1II	CATG	9 cut(s)	209, 266, 565, 763, 902, 1315, 1384, 1480, 1610
Hin6I	GCGC	4 cut(s)	295, 930, 1388, 1403
HinP1I	GCGC	4 cut(s)	295, 930, 1388, 1403
HincII	GTYRAC	2 cut(s)	8, 858
HindII	GTYRAC	2 cut(s)	8, 858
HindIII	AAGCTT	3 cut(s)	593, 789, 1254
HinfI	GANTC	6 cut(s)	4, 366, 521, 685, 1546, 1571
HpaII	CCGG	3 cut(s)	111, 292, 1264
HphI	GGTGA	3 cut(s)	119, 280, 438
Hpy166II	GTNNAC	6 cut(s)	8, 766, 803, 858, 1187, 1324
Hpy188I	TCNGA	6 cut(s)	310, 625, 670, 1032, 1137, 1533
Hpy188III	TCNNGA	9 cut(s)	518, 525, 776, 912, 1410, 1433, 1490, 1550, 1591
Hpy8I	GTNNAC	6 cut(s)	8, 766, 803, 858, 1187, 1324
HpyAV	CCTTC	4 cut(s)	202, 434, 635, 700
HpyCH4III	ACNGT	3 cut(s)	322, 995, 1211
HpyCH4IV	ACGT	5 cut(s)	513, 1107, 1372, 1595, 1665
HpyCH4V	TGCA	3 cut(s)	407, 866, 1448
HpyF10VI	GCNNNNNNNGC	8 cut(s)	98, 107, 116, 338, 413, 601, 872, 1385
HpyF3I	CTNAG	5 cut(s)	380, 554, 870, 1245, 1686
HpySE526I	ACGT	5 cut(s)	513, 1107, 1372, 1595, 1665
Hsp92I	GRCGYC	1 cut(s)	1347
Hsp92II	CATG	9 cut(s)	209, 266, 565, 763, 902, 1315, 1384, 1480, 1610
HspAI	GCGC	4 cut(s)	295, 930, 1388, 1403
Ksp22I	TGATCA	2 cut(s)	772, 1045
LmnI	GCTCC	2 cut(s)	1473, 1492
Lsp1109I	GCAGC	7 cut(s)	79, 110, 616, 629, 919, 932, 1071
LweI	GCATC	5 cut(s)	1366, 1435, 1524, 1531, 1660
MaeI	CTAG	2 cut(s)	1052, 1161
MaeII	ACGT	5 cut(s)	513, 1107, 1372, 1595, 1665
MaeIII	GTNAC	3 cut(s)	322, 444, 1661
MbiI	CCGCTC	1 cut(s)	829
MboII	GAAGA	8 cut(s)	116, 161, 580, 580, 686, 832, 1454, 1622
MflI	RGATCY	3 cut(s)	80, 1060, 1232
MhlI	GDGCHC	2 cut(s)	390, 958
MlsI	TGGCCA	1 cut(s)	999
MluNI	TGGCCA	1 cut(s)	999
MlyI	GAGTC	3 cut(s)	13, 515, 694
MmeI	TCCRAC	2 cut(s)	333, 1088
Mox20I	TGGCCA	1 cut(s)	999
MroXI	GAANNNNTTC	1 cut(s)	1617
MscI	TGGCCA	1 cut(s)	999
MseI	TTAA	4 cut(s)	704, 807, 939, 1130
MslI	CAYNNNNRTG	3 cut(s)	454, 473, 758
Msp20I	TGGCCA	1 cut(s)	999
MspCI	CTTAAG	1 cut(s)	806
MspI	CCGG	3 cut(s)	111, 292, 1264
MspR9I	CCNGG	8 cut(s)	78, 176, 292, 611, 785, 1230, 1265, 1623
Mva1269I	GAATGC	2 cut(s)	24, 1390
MvaI	CCWGG	6 cut(s)	78, 176, 611, 785, 1230, 1623
MvnI	CGCG	2 cut(s)	930, 1634
MwoI	GCNNNNNNNGC	8 cut(s)	98, 107, 116, 338, 413, 601, 872, 1385
NciI	CCSGG	2 cut(s)	292, 1265
NcoI	CCATGG	1 cut(s)	759
NlaIII	CATG	9 cut(s)	209, 266, 565, 763, 902, 1315, 1384, 1480, 1610
NlaIV	GGNNCC	4 cut(s)	82, 388, 1062, 1077
NmuCI	GTSAC	2 cut(s)	444, 1661
NspI	RCATGY	2 cut(s)	1315, 1480
PaeR7I	CTCGAG	1 cut(s)	525
PctI	GAATGC	2 cut(s)	24, 1390
PdmI	GAANNNNTTC	1 cut(s)	1617
PfeI	GAWTC	3 cut(s)	366, 1546, 1571
PfoI	TCCNGGA	1 cut(s)	1228
PleI	GAGTC	3 cut(s)	12, 515, 693
PpsI	GAGTC	3 cut(s)	12, 515, 693
Ppu21I	YACGTR	1 cut(s)	1373
PpuMI	RGGWCCY	1 cut(s)	1075
PsiI	TTATAA	1 cut(s)	920
Psp1406I	AACGTT	1 cut(s)	513
Psp5II	RGGWCCY	1 cut(s)	1075
Psp6I	CCWGG	6 cut(s)	76, 174, 609, 783, 1228, 1621
PspEI	GGTNACC	1 cut(s)	322
PspFI	CCCAGC	2 cut(s)	38, 348
PspGI	CCWGG	6 cut(s)	76, 174, 609, 783, 1228, 1621
PspN4I	GGNNCC	4 cut(s)	82, 388, 1062, 1077
PspOMI	GGGCCC	1 cut(s)	386
PspPI	GGNCC	5 cut(s)	70, 386, 387, 421, 1075
PspPPI	RGGWCCY	1 cut(s)	1075
PstNI	CAGNNNCTG	3 cut(s)	610, 623, 1495
PsuI	RGATCY	3 cut(s)	80, 1060, 1232
RsaI	GTAC	2 cut(s)	1241, 1325
RsaNI	GTAC	2 cut(s)	1240, 1324
RseI	CAYNNNNRTG	3 cut(s)	454, 473, 758
SaqAI	TTAA	4 cut(s)	704, 807, 939, 1130
Sau96I	GGNCC	5 cut(s)	70, 386, 387, 421, 1075
SchI	GAGTC	3 cut(s)	13, 515, 694
ScrFI	CCNGG	8 cut(s)	78, 176, 292, 611, 785, 1230, 1265, 1623
SduI	GDGCHC	2 cut(s)	390, 958
SfaNI	GCATC	5 cut(s)	1366, 1435, 1524, 1531, 1660
Sfr274I	CTCGAG	1 cut(s)	525
SinI	GGWCC	2 cut(s)	421, 1075
SlaI	CTCGAG	1 cut(s)	525
SmiMI	CAYNNNNRTG	3 cut(s)	454, 473, 758
SmlI	CTYRAG	4 cut(s)	336, 525, 806, 1122
SmoI	CTYRAG	4 cut(s)	336, 525, 806, 1122
SsiI	CCGC	9 cut(s)	22, 96, 153, 384, 829, 925, 928, 1580, 1634
SspI	AATATT	1 cut(s)	537
SspMI	CTAG	2 cut(s)	1052, 1161
StyD4I	CCNGG	8 cut(s)	76, 174, 290, 609, 783, 1228, 1263, 1621
StyI	CCWWGG	2 cut(s)	390, 759
TaaI	ACNGT	3 cut(s)	322, 995, 1211
TaiI	ACGT	5 cut(s)	516, 1110, 1375, 1598, 1668
TaqI	TCGA	4 cut(s)	526, 825, 851, 1259
TauI	GCSGC	4 cut(s)	98, 156, 927, 930
TfiI	GAWTC	3 cut(s)	366, 1546, 1571
Tru1I	TTAA	4 cut(s)	704, 807, 939, 1130
Tru9I	TTAA	4 cut(s)	704, 807, 939, 1130
TscAI	CASTG	4 cut(s)	280, 1000, 1194, 1666
TseFI	GTSAC	2 cut(s)	444, 1661
TseI	GCWGC	7 cut(s)	92, 98, 604, 617, 932, 945, 1084
Tsp45I	GTSAC	2 cut(s)	444, 1661
TspDTI	ATGAA	6 cut(s)	491, 687, 1083, 1397, 1521, 1623
TspGWI	ACGGA	4 cut(s)	73, 434, 998, 1517
TspRI	CASTG	4 cut(s)	280, 1000, 1194, 1666
Vha464I	CTTAAG	1 cut(s)	806
VpaK11BI	GGWCC	2 cut(s)	421, 1075
XapI	RAATTY	4 cut(s)	199, 663, 1033, 1613
XceI	RCATGY	2 cut(s)	1315, 1480
XhoI	CTCGAG	1 cut(s)	525
XmiI	GTMKAC	2 cut(s)	765, 802
XmnI	GAANNNNTTC	1 cut(s)	1617
XspI	CTAG	2 cut(s)	1052, 1161

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.