Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0009986

Physical Location & Seq

Genomic Coordinates Forward (+)

9613178 .. 9621158

Gene Structure 7981 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG116400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2673 bp

ATGTACGGATCAAGAGGGGCAATGTTGGGAGGCGGGGGGTTATCGGACGTCTACGAGGTCGGCTCAAAGAGACCAAGAATGATGGAATCAAATCCCTACTTCGCAGTTGGCAGCAGTGCAAGGGGCTTTCAACCTTTCGGCGGCTATGGTGGCGGCTTCCAGCTTCCTGCTTTCCCCGTGGTCCGTCTTAGGGGGCTTCCTTTCAACTGCACAGACATTGACATCTTCAAGTTCTTTGCTGGACTGGATATTGTGGATGTGTTGCTGGTCAACAAGGGTGGACGCTTCTCAGGAGAGGCCTTTGTTGTCTTTGCTGGACCTTTGCAGGTTGAGTTAGCTCTTCAAAGAGATCGGCAGAACATGGGGCGTAGGTATGTTGAAGTTTTCACATGCAAGAGGCAGGATTACTACAATGCTGTTGCAGCAGAGGTCAGCTATGAAGGGATTTATGACAATGATTTTCAAGGAAGTCCTCCTCCAGCTAAATCATCATCAAAGCGGTTCAATGATAAGGAAAAAATGGAATACACTGAGATATTGAAGTTGCGTGGTCTACCATTCTCTGTAAAAAGATCTCAAATTATTGATTTTTTTGGAGATTTCAAGGTCGTTGAAGATAGAGTACATATTGCTTGCCGCCCAGATGGAAAAGCTACCGGAGAGGCATACGTGGAGTTTGTTTCTGCAGAAGAGGCTAAAAAGGCAATGTCCAAGGACAAGATGATGATTGGGTCCAGAGTAGCAGAGGCTCCAGTCGGGGTCCCCTTTTCTCTGTTATCAGCTGAGAGAAACGACGTGTCACTGTATTACTTTCACAAACAAACGACGTGTCGTTATCAATCAGCCGTTATACAGCAACCGGGTCTCACCGGTTCTTGCTCCTCAGTCTACCTGATCTGGACCCTACGAGACTCCCTCCCTCCTCCTGAAACGAAAATTGTGCAGTGGTTTCCGACCAACCGAAACTTCTCTCCGTCTGCAAGTTTCGCTACGATCGCTGCAATGAGTGAATCGCCATTTGATGATCCGATCGAACCGACTTCCTTCGACCTTATCGTCATCGGAACCGGCCTCCCGGAGTCAGTAATCGCTGCAGCAGCATCTACTTCCGGCAAAACTGTTCTCCAGCTTGACCCTAACGACTCCTACGGCAGCCACTTTGCTTCTCATACACTTGATGACCTCACTTCCTTCGTGAATTCACATGCTACTCCACCTCCCTCCACCGCCGGCGTTACAAGTAGTGAAGGTGATTATACTACTTTGGATCTCAATCCCCGTTCGCTGTACTCCCACATTGAGACCGCCAACTATGCCCCGGAAATCCTTGCAGAGCATTCGAGGAGATTCCTTATTGACATTGGCGGGCCTAGGGTGCTGTTCTGTGCTGACAAGGCCATTGAGCTTATATTGAAGTTGGGTGTGGGGTCGTATTTGAATTTCAAGGCTGTTGATGGGAACTTGATTTGGGATGAGAGTAGCGGCGGGTTGTGTAATGTGCCGGACTCAAGAGCAGCGATATTTAAAGACAAGGGCATGAGTCTTAAAGAGAAGAATCAGTTGATGAGGTTCTTCAAGCTTGTTCAGCAGCACTTGGCAGCAGCAGCCTCTGATGGTGAACAAGATAATGAGAGTTCAAAGATTTCTGAGGAGGATTTGGAGACCCCATTTGTTGACTTCTTAACAACACGGCTGCCGCACAAGATTAAATCGATTATCCTTTATTCCATTGCAATGGTTGATTATGATCAAGACAACCCAAAAGTTTATAAAAGTATACTGAAGACAAGAGATGGGATATCGCGTTTAGCTCTCTATCAAAAATCAGTTGGCAGGTTTCCAGATGCCAATGGAGCTTTTCTTTATCCTATGTATGGTCATGGGGAGTTATCACAAGCCTTTTGCCGCCGTGCTGCTGTTAAAGGTTGTCTTCAAGTTCTGCGAAGGCCAGTGATTTCTCTGCTTATGGACAAGGATAGTGGGCAATATAAGGGTGTTAGATTAGTTTCAGGTCAGGATTTGTTGAGTCATCGGCTGGTTATGGATCCAACCTTCACGGTCCCACTGCCACCGGCTTCATCTCCACCAGACCTTCCAAAAGAAAGTCTGAAAGGTGATAAAAGAATGGTGGCCAGGGGAATATGTATTACAACAAGATCCTTGAAGCCAGATATATCAAACTTATTGCTTGTGTATCCTCCTAGATCTTTGTTTTCTGAGCAGGACACTTCAGTCCGAGCTATCCAGATTCGTGGCGGAACAGATGGTGGCGGTTTGGCTGTTTGTCCATCGAGCATGTTTGTGTTGTACTTTTCTGCTCTATGTGATGATGCTGAACAAGGGAAAAGGTTGCTACATGCGGCCATGAATGCTCTTCTCACACTTCCTGTGTCTGGAAATCTTGAAAGTGGTTCCACAGTTCAAAGTGAAGACGCAGAACTAAAAGCCACCTTACTTTGGAGCATGCTATACATTCAGGAGATCACAACGGGTCAATATGAACATCTCATCTCCACTCCCATGCCAGATGGAAATCTCAACTATGATGATCTGCTGGATGAAACTGTTCTGCTCTTCCAGAAGATGTATCCAGACGAGGCATTCTTTCCAGAGACACCTTCCTTGCCCGAGAATCCAGAAGAGGATATTGAAGGGCTTAGTCTTGAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005968 GO:0008150 GO:0009889 GO:0009893 GO:0010556 GO:0010604 GO:0017016 GO:0017137 GO:0019222 GO:0019899 GO:0031267 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0032991 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051020 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0080090 GO:1902494 GO:1990234 GO:2000112 GO:2000539 GO:2000541

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GDI

Protein Analysis

890

Amino Acids

97.98

Weight (kDa)

5.27

Isoelectric Point (pI)

49.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	182 - 247	5.6e-07	RNA recognition motif
GDI	PF00996	348 - 427	4.7e-08	GDP dissociation inhibitor
GDI	PF00996	424 - 686	3.3e-25	GDP dissociation inhibitor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009986)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06540
fragaria_vesca	FvH4_1g10450
malus_domestica	MD02G1117700.v1.1 MD10G1065000.v1.1 MD15G1232400.v1.1 MD17G1057100.v1.1
prunus_persica	Prupe.7G181700_v2.0.a1
pyrus_communis	pycom02g09110 pycom10g05080 pycom15g20680 pycom17g05720
rosa_chinensis	RchiOBHm_Chr2g0097311
rosa_laevigata	RLG00000016716
rosa_multiflora	Rmu_sc0002425.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144790
rosa_rugosa	Rorug02G0065700
rosa_samantha	Rh2AG112400 Rh2BG115100 Rh2CG117200 Rh2DG116400
rosa_wichuraiana	Rw2G008790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1770
AasI	GACNNNNNNGTC	2 cut(s)	1055, 2231
AatII	GACGTC	1 cut(s)	51
Acc36I	ACCTGC	2 cut(s)	316, 1824
AccI	GTMKAC	4 cut(s)	51, 553, 888, 1777
AccII	CGCG	1 cut(s)	1804
AclWI	GGATC	6 cut(s)	16, 1019, 1275, 2039, 2052, 2151
AcoI	YGGCCR	2 cut(s)	2130, 2361
AcsI	RAATTY	2 cut(s)	1198, 1438
AcuI	CTGAAG	2 cut(s)	1802, 2214
AcyI	GRCGYC	1 cut(s)	48
AfaI	GTAC	4 cut(s)	5, 624, 1289, 2309
AfiI	CCNNNNNNNGG	5 cut(s)	140, 190, 1874, 2393, 2457
AflIII	ACRYGT	2 cut(s)	795, 827
AgeI	ACCGGT	1 cut(s)	869
AjiI	CACGTC	2 cut(s)	796, 828
AjnI	CCWGG	1 cut(s)	2132
AjuI	GAANNNNNNNTTGG	2 cut(s)	950, 982
Alw26I	GTCTC	6 cut(s)	64, 869, 903, 1295, 1655, 2606
AlwI	GGATC	6 cut(s)	16, 1019, 1275, 2039, 2052, 2151
AlwNI	CAGNNNCTG	1 cut(s)	1610
Ama87I	CYCGRG	1 cut(s)	2627
AoxI	GGCC	7 cut(s)	297, 1069, 1367, 1395, 1946, 2130, 2361
ApoI	RAATTY	2 cut(s)	1198, 1438
ArsI	GACNNNNNNTTYG	2 cut(s)	814, 846
AsiGI	ACCGGT	1 cut(s)	869
Asp700I	GAANNNNTTC	1 cut(s)	2565
AspA2I	CCTAGG	1 cut(s)	1370
AspS9I	GGNCC	7 cut(s)	181, 317, 732, 760, 900, 1367, 2059
AsuC2I	CCSGG	3 cut(s)	861, 1076, 1319
AsuHPI	GGTGA	4 cut(s)	859, 1262, 1628, 2126
AvaI	CYCGRG	1 cut(s)	2627
AvaII	GGWCC	6 cut(s)	181, 317, 732, 760, 900, 2059
AvrII	CCTAGG	1 cut(s)	1370
BalI	TGGCCA	1 cut(s)	2132
BamHI	GGATCC	1 cut(s)	2044
BarI	GAAGNNNNNNTAC	2 cut(s)	606, 638
BbsI	GAAGAC	3 cut(s)	1790, 1922, 2436
BccI	CCATC	8 cut(s)	76, 638, 1448, 1607, 1787, 2258, 2296, 2522
BceAI	ACGGC	4 cut(s)	830, 1165, 1706, 1893
BcgI	CGANNNNNNTGC	4 cut(s)	922, 956, 1320, 1354
BciT130I	CCWGG	1 cut(s)	2134
BciVI	GTATCC	2 cut(s)	2205, 2598
BclI	TGATCA	1 cut(s)	1747
BcnI	CCSGG	3 cut(s)	861, 1076, 1319
BcoDI	GTCTC	6 cut(s)	64, 869, 903, 1295, 1655, 2606
BfaI	CTAG	2 cut(s)	1371, 2202
BfmI	CTRYAG	2 cut(s)	684, 1092
BfuAI	ACCTGC	2 cut(s)	316, 1824
BfuI	GTATCC	2 cut(s)	2205, 2598
BglII	AGATCT	2 cut(s)	572, 2204
BlnI	CCTAGG	1 cut(s)	1370
Bme1390I	CCNGG	4 cut(s)	861, 1076, 1319, 2134
Bme18I	GGWCC	6 cut(s)	181, 317, 732, 760, 900, 2059
BmeT110I	CYCGRG	1 cut(s)	2627
BmgBI	CACGTC	2 cut(s)	796, 828
BmgT120I	GGNCC	7 cut(s)	181, 317, 732, 760, 900, 1367, 2059
BmiI	GGNNCC	9 cut(s)	733, 750, 761, 762, 902, 1066, 2046, 2061, 2413
BmrFI	CCNGG	4 cut(s)	861, 1076, 1319, 2134
BmsI	GCATC	3 cut(s)	1109, 1834, 2320
BpiI	GAAGAC	3 cut(s)	1790, 1922, 2436
BplI	GAGNNNNNCTC	4 cut(s)	47, 79, 900, 932
BpmI	CTGGAG	3 cut(s)	462, 735, 1109
BpuEI	CTTGAG	1 cut(s)	1492
BpuMI	CCSGG	3 cut(s)	861, 1076, 1319
Bsa29I	ATCGAT	1 cut(s)	1712
BsaAI	YACGTR	1 cut(s)	670
BsaBI	GATNNNNATC	3 cut(s)	1272, 1746, 2532
BsaHI	GRCGYC	1 cut(s)	48
BsaI	GGTCTC	4 cut(s)	64, 869, 1295, 1655
BsaJI	CCNNGG	5 cut(s)	177, 711, 1317, 1370, 2133
BsaWI	WCCGGW	2 cut(s)	656, 869
BsaXI	ACNNNNNCTCC	2 cut(s)	1201, 1231
Bsc4I	CCNNNNNNNGG	5 cut(s)	140, 190, 1874, 2393, 2457
Bse118I	RCCGGY	4 cut(s)	869, 1067, 1229, 2071
Bse1I	ACTGG	3 cut(s)	249, 752, 1949
Bse3DI	GCAATG	5 cut(s)	27, 711, 1008, 1728, 1740
Bse8I	GATNNNNATC	3 cut(s)	1272, 1746, 2532
BseBI	CCWGG	1 cut(s)	2134
BseCI	ATCGAT	1 cut(s)	1712
BseDI	CCNNGG	5 cut(s)	177, 711, 1317, 1370, 2133
BseGI	GGATG	3 cut(s)	262, 1477, 2563
BseJI	GATNNNNATC	3 cut(s)	1272, 1746, 2532
BseLI	CCNNNNNNNGG	5 cut(s)	140, 190, 1874, 2393, 2457
BseMI	GCAATG	5 cut(s)	27, 711, 1008, 1728, 1740
BseMII	CTCAG	6 cut(s)	303, 522, 774, 897, 1638, 2208
BseNI	ACTGG	3 cut(s)	249, 752, 1949
BseRI	GAGGAG	5 cut(s)	465, 871, 912, 1357, 1664
BsgI	GTGCAG	2 cut(s)	193, 962
Bsh1236I	CGCG	1 cut(s)	1804
Bsh1285I	CGRYCG	2 cut(s)	996, 1032
BshFI	GGCC	7 cut(s)	299, 1071, 1369, 1397, 1948, 2132, 2363
BshTI	ACCGGT	1 cut(s)	869
BshVI	ATCGAT	1 cut(s)	1712
BsiEI	CGRYCG	2 cut(s)	996, 1032
BsiHKCI	CYCGRG	1 cut(s)	2627
BslFI	GGGAC	2 cut(s)	746, 2045
BslI	CCNNNNNNNGG	5 cut(s)	140, 190, 1874, 2393, 2457
BsmAI	GTCTC	6 cut(s)	64, 869, 903, 1295, 1655, 2606
BsmFI	GGGAC	2 cut(s)	746, 2045
BsmI	GAATGC	3 cut(s)	1336, 2374, 2600
BsnI	GGCC	7 cut(s)	299, 1071, 1369, 1397, 1948, 2132, 2363
Bso31I	GGTCTC	4 cut(s)	64, 869, 1295, 1655
BsoBI	CYCGRG	1 cut(s)	2627
BspANI	GGCC	7 cut(s)	299, 1071, 1369, 1397, 1948, 2132, 2363
BspCNI	CTCAG	6 cut(s)	302, 523, 775, 896, 1639, 2209
BspDI	ATCGAT	1 cut(s)	1712
BspFNI	CGCG	1 cut(s)	1804
BspLI	GGNNCC	9 cut(s)	733, 750, 761, 762, 902, 1066, 2046, 2061, 2413
BspMAI	CTGCAG	2 cut(s)	688, 1096
BspMI	ACCTGC	2 cut(s)	316, 1824
BspPI	GGATC	6 cut(s)	16, 1019, 1275, 2039, 2052, 2151
BspQI	GCTCTTC	3 cut(s)	345, 2379, 2579
BspTNI	GGTCTC	4 cut(s)	64, 869, 1295, 1655
BsrDI	GCAATG	5 cut(s)	27, 711, 1008, 1728, 1740
BsrFI	RCCGGY	4 cut(s)	869, 1067, 1229, 2071
BsrI	ACTGG	3 cut(s)	249, 752, 1949
BssAI	RCCGGY	4 cut(s)	869, 1067, 1229, 2071
BssECI	CCNNGG	5 cut(s)	177, 711, 1317, 1370, 2133
BssNAI	GTATAC	1 cut(s)	1778
BssNI	GRCGYC	1 cut(s)	48
BssT1I	CCWWGG	2 cut(s)	711, 1370
Bst1107I	GTATAC	1 cut(s)	1778
Bst2UI	CCWGG	1 cut(s)	2134
Bst4CI	ACNGT	5 cut(s)	804, 1120, 2059, 2419, 2566
Bst6I	CTCTTC	5 cut(s)	345, 684, 2379, 2579, 2634
BstACI	GRCGYC	1 cut(s)	48
BstBAI	YACGTR	1 cut(s)	670
BstC8I	GCNNGC	4 cut(s)	634, 1231, 1367, 2465
BstDEI	CTNAG	8 cut(s)	188, 289, 531, 783, 883, 1647, 2217, 2657
BstDSI	CCRYGG	1 cut(s)	177
BstF5I	GGATG	3 cut(s)	262, 1477, 2563
BstFNI	CGCG	1 cut(s)	1804
BstMAI	GTCTC	6 cut(s)	64, 869, 903, 1295, 1655, 2606
BstMCI	CGRYCG	2 cut(s)	996, 1032
BstNI	CCWGG	1 cut(s)	2134
BstNSI	RCATGY	5 cut(s)	393, 1208, 2299, 2360, 2467
BstSCI	CCNGG	4 cut(s)	859, 1074, 1317, 2132
BstSFI	CTRYAG	2 cut(s)	684, 1092
BstUI	CGCG	1 cut(s)	1804
BstV2I	GAAGAC	3 cut(s)	1790, 1922, 2436
BstX2I	RGATCY	5 cut(s)	572, 1267, 2044, 2156, 2204
BstXI	CCANNNNNNTGG	2 cut(s)	1735, 2252
BstYI	RGATCY	5 cut(s)	572, 1267, 2044, 2156, 2204
BstZ17I	GTATAC	1 cut(s)	1778
Bsu15I	ATCGAT	1 cut(s)	1712
BsuI	GTATCC	2 cut(s)	2205, 2598
BsuRI	GGCC	7 cut(s)	299, 1071, 1369, 1397, 1948, 2132, 2363
BsuTUI	ATCGAT	1 cut(s)	1712
BtgI	CCRYGG	1 cut(s)	177
BtrI	CACGTC	2 cut(s)	796, 828
BtsCI	GGATG	3 cut(s)	262, 1477, 2563
BtsI	GCAGTG	3 cut(s)	121, 950, 2063
BtsIMutI	CAGTG	6 cut(s)	121, 528, 800, 950, 1956, 2063
BveI	ACCTGC	2 cut(s)	316, 1824
Cac8I	GCNNGC	4 cut(s)	634, 1231, 1367, 2465
CaiI	CAGNNNCTG	1 cut(s)	1610
Cfr10I	RCCGGY	4 cut(s)	869, 1067, 1229, 2071
Cfr13I	GGNCC	7 cut(s)	181, 317, 732, 760, 900, 1367, 2059
ClaI	ATCGAT	1 cut(s)	1712
CseI	GACGC	2 cut(s)	291, 2441
Csp6I	GTAC	4 cut(s)	4, 623, 1288, 2308
CspAI	ACCGGT	1 cut(s)	869
CspCI	CAANNNNNGTGG	4 cut(s)	259, 294, 1960, 1995
CviQI	GTAC	4 cut(s)	4, 623, 1288, 2308
DdeI	CTNAG	8 cut(s)	188, 289, 531, 783, 883, 1647, 2217, 2657
DraI	TTTAAA	1 cut(s)	1525
DrdI	GACNNNNNNGTC	2 cut(s)	1055, 2231
DseDI	GACNNNNNNGTC	2 cut(s)	1055, 2231
EaeI	YGGCCR	2 cut(s)	2130, 2361
Eam1104I	CTCTTC	5 cut(s)	345, 684, 2379, 2579, 2634
EarI	CTCTTC	5 cut(s)	345, 684, 2379, 2579, 2634
EciI	GGCGGA	1 cut(s)	2271
Eco130I	CCWWGG	2 cut(s)	711, 1370
Eco147I	AGGCCT	1 cut(s)	299
Eco31I	GGTCTC	4 cut(s)	64, 869, 1295, 1655
Eco32I	GATATC	1 cut(s)	1800
Eco47I	GGWCC	6 cut(s)	181, 317, 732, 760, 900, 2059
Eco57I	CTGAAG	2 cut(s)	1802, 2214
Eco88I	CYCGRG	1 cut(s)	2627
EcoO109I	RGGNCCY	1 cut(s)	760
EcoRI	GAATTC	1 cut(s)	1198
EcoRII	CCWGG	1 cut(s)	2132
EcoRV	GATATC	1 cut(s)	1800
EcoT14I	CCWWGG	2 cut(s)	711, 1370
ErhI	CCWWGG	2 cut(s)	711, 1370
FalI	AAGNNNNNCTT	2 cut(s)	1914, 1946
FaqI	GGGAC	2 cut(s)	746, 2045
FauI	CCCGC	3 cut(s)	26, 1358, 1478
FbaI	TGATCA	1 cut(s)	1747
FblI	GTMKAC	4 cut(s)	51, 553, 888, 1777
FokI	GGATG	3 cut(s)	269, 1484, 2570
FspBI	CTAG	2 cut(s)	1371, 2202
GsuI	CTGGAG	3 cut(s)	462, 735, 1109
HaeIII	GGCC	7 cut(s)	299, 1071, 1369, 1397, 1948, 2132, 2363
HgaI	GACGC	2 cut(s)	291, 2441
Hin1I	GRCGYC	1 cut(s)	48
HincII	GTYRAC	2 cut(s)	271, 1675
HindII	GTYRAC	2 cut(s)	271, 1675
HindIII	AAGCTT	1 cut(s)	1577
HphI	GGTGA	4 cut(s)	859, 1262, 1628, 2126
Hpy166II	GTNNAC	8 cut(s)	52, 271, 281, 554, 889, 1619, 1675, 1778
Hpy188I	TCNGA	9 cut(s)	46, 954, 1029, 1064, 1612, 1648, 2109, 2218, 2237
Hpy8I	GTNNAC	8 cut(s)	52, 271, 281, 554, 889, 1619, 1675, 1778
Hpy99I	CGWCG	2 cut(s)	797, 829
HpyAV	CCTTC	9 cut(s)	434, 1054, 1201, 1241, 1938, 2062, 2102, 2628, 2645
HpyCH4III	ACNGT	5 cut(s)	804, 1120, 2059, 2419, 2566
HpyCH4IV	ACGT	4 cut(s)	48, 669, 795, 827
HpyF3I	CTNAG	8 cut(s)	188, 289, 531, 783, 883, 1647, 2217, 2657
HpySE526I	ACGT	4 cut(s)	48, 669, 795, 827
Hsp92I	GRCGYC	1 cut(s)	48
KflI	GGGWCCC	1 cut(s)	760
KroI	GCCGGC	1 cut(s)	1229
KroNI	GCCGGC	1 cut(s)	1231
Ksp22I	TGATCA	1 cut(s)	1747
LguI	GCTCTTC	3 cut(s)	345, 2379, 2579
LmnI	GCTCC	4 cut(s)	754, 884, 1853, 2460
LweI	GCATC	3 cut(s)	1109, 1834, 2320
MaeI	CTAG	2 cut(s)	1371, 2202
MaeII	ACGT	4 cut(s)	48, 669, 795, 827
MaeIII	GTNAC	2 cut(s)	798, 1234
MflI	RGATCY	5 cut(s)	572, 1267, 2044, 2156, 2204
MlsI	TGGCCA	1 cut(s)	2132
MluCI	AATT	4 cut(s)	579, 936, 1198, 1438
MluNI	TGGCCA	1 cut(s)	2132
MlyI	GAGTC	6 cut(s)	905, 1088, 1136, 1499, 1549, 2035
MmeI	TCCRAC	2 cut(s)	977, 2072
Mox20I	TGGCCA	1 cut(s)	2132
MreI	CGCCGGCG	1 cut(s)	1229
MroNI	GCCGGC	1 cut(s)	1229
MroXI	GAANNNNTTC	1 cut(s)	2565
MscI	TGGCCA	1 cut(s)	2132
MseI	TTAA	5 cut(s)	1524, 1545, 1682, 1707, 1920
MslI	CAYNNNNRTG	3 cut(s)	1733, 2300, 2519
Msp20I	TGGCCA	1 cut(s)	2132
MspA1I	CMGCKG	1 cut(s)	782
MspR9I	CCNGG	4 cut(s)	861, 1076, 1319, 2134
Mva1269I	GAATGC	3 cut(s)	1336, 2374, 2600
MvaI	CCWGG	1 cut(s)	2134
MvnI	CGCG	1 cut(s)	1804
NaeI	GCCGGC	1 cut(s)	1231
NciI	CCSGG	3 cut(s)	861, 1076, 1319
NgoMIV	GCCGGC	1 cut(s)	1229
NlaIV	GGNNCC	9 cut(s)	733, 750, 761, 762, 902, 1066, 2046, 2061, 2413
NmuCI	GTSAC	1 cut(s)	798
NspI	RCATGY	5 cut(s)	393, 1208, 2299, 2360, 2467
PaeI	GCATGC	1 cut(s)	2467
PceI	AGGCCT	1 cut(s)	299
PciSI	GCTCTTC	3 cut(s)	345, 2379, 2579
PcsI	WCGNNNNNNNCGW	1 cut(s)	1053
PctI	GAATGC	3 cut(s)	1336, 2374, 2600
PdiI	GCCGGC	1 cut(s)	1231
PdmI	GAANNNNTTC	1 cut(s)	2565
PfeI	GAWTC	6 cut(s)	86, 1010, 1347, 1555, 2248, 2632
PfoI	TCCNGGA	1 cut(s)	1074
PinAI	ACCGGT	1 cut(s)	869
Ple19I	CGATCG	2 cut(s)	996, 1032
PleI	GAGTC	6 cut(s)	905, 1087, 1136, 1499, 1548, 2034
PpsI	GAGTC	6 cut(s)	905, 1087, 1136, 1499, 1548, 2034
Ppu21I	YACGTR	1 cut(s)	670
PpuMI	RGGWCCY	1 cut(s)	760
PsiI	TTATAA	1 cut(s)	1770
Psp5II	RGGWCCY	1 cut(s)	760
Psp6I	CCWGG	1 cut(s)	2132
PspGI	CCWGG	1 cut(s)	2132
PspN4I	GGNNCC	9 cut(s)	733, 750, 761, 762, 902, 1066, 2046, 2061, 2413
PspPI	GGNCC	7 cut(s)	181, 317, 732, 760, 900, 1367, 2059
PspPPI	RGGWCCY	1 cut(s)	760
PstI	CTGCAG	2 cut(s)	688, 1096
PstNI	CAGNNNCTG	1 cut(s)	1610
PsuI	RGATCY	5 cut(s)	572, 1267, 2044, 2156, 2204
PvuI	CGATCG	2 cut(s)	996, 1032
PvuII	CAGCTG	1 cut(s)	782
RsaI	GTAC	4 cut(s)	5, 624, 1289, 2309
RsaNI	GTAC	4 cut(s)	4, 623, 1288, 2308
RseI	CAYNNNNRTG	3 cut(s)	1733, 2300, 2519
SapI	GCTCTTC	3 cut(s)	345, 2379, 2579
SaqAI	TTAA	5 cut(s)	1524, 1545, 1682, 1707, 1920
Sau96I	GGNCC	7 cut(s)	181, 317, 732, 760, 900, 1367, 2059
SchI	GAGTC	6 cut(s)	905, 1088, 1136, 1499, 1549, 2035
ScrFI	CCNGG	4 cut(s)	861, 1076, 1319, 2134
SfaNI	GCATC	3 cut(s)	1109, 1834, 2320
SfcI	CTRYAG	2 cut(s)	684, 1092
SgrAI	CRCCGGYG	1 cut(s)	1229
SinI	GGWCC	6 cut(s)	181, 317, 732, 760, 900, 2059
SmiMI	CAYNNNNRTG	3 cut(s)	1733, 2300, 2519
SmlI	CTYRAG	1 cut(s)	1507
SmoI	CTYRAG	1 cut(s)	1507
SphI	GCATGC	1 cut(s)	2467
Sse9I	AATT	4 cut(s)	579, 936, 1198, 1438
SseBI	AGGCCT	1 cut(s)	299
SspMI	CTAG	2 cut(s)	1371, 2202
StuI	AGGCCT	1 cut(s)	299
StyD4I	CCNGG	4 cut(s)	859, 1074, 1317, 2132
StyI	CCWWGG	2 cut(s)	711, 1370
TaaI	ACNGT	5 cut(s)	804, 1120, 2059, 2419, 2566
TaiI	ACGT	4 cut(s)	51, 672, 798, 830
TaqI	TCGA	5 cut(s)	1032, 1047, 1340, 1712, 2291
TasI	AATT	4 cut(s)	579, 936, 1198, 1438
TatI	WGTACW	3 cut(s)	622, 1287, 2307
TauI	GCSGC	7 cut(s)	144, 156, 639, 1485, 1699, 1908, 2363
TfiI	GAWTC	6 cut(s)	86, 1010, 1347, 1555, 2248, 2632
Tru1I	TTAA	5 cut(s)	1524, 1545, 1682, 1707, 1920
Tru9I	TTAA	5 cut(s)	1524, 1545, 1682, 1707, 1920
TscAI	CASTG	6 cut(s)	121, 535, 807, 950, 1956, 2070
TseFI	GTSAC	1 cut(s)	798
Tsp45I	GTSAC	1 cut(s)	798
TspDTI	ATGAA	5 cut(s)	453, 2067, 2381, 2514, 2574
TspGWI	ACGGA	3 cut(s)	21, 173, 963
TspRI	CASTG	6 cut(s)	121, 535, 807, 950, 1956, 2070
VpaK11BI	GGWCC	6 cut(s)	181, 317, 732, 760, 900, 2059
XapI	RAATTY	2 cut(s)	1198, 1438
XceI	RCATGY	5 cut(s)	393, 1208, 2299, 2360, 2467
XmaJI	CCTAGG	1 cut(s)	1370
XmiI	GTMKAC	4 cut(s)	51, 553, 888, 1777
XmnI	GAANNNNTTC	1 cut(s)	2565
XspI	CTAG	2 cut(s)	1371, 2202
ZraI	GACGTC	1 cut(s)	49

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.