FvH4_1g23240

May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0003094
Physical Location & Seq
Reverse (-)
15091483 .. 15097967
6485 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g23240.t1

Sequence Viewer

Length: 1902 bp
ATGGAGGCCTGTAACTGTATCGAGCCGCAATGGCCGGCCGATGAGCTGTTGATCAAGTATCAATACATTTCGGACTTTTTTATTGCTATTGCGTATTTTTCAATCCCTCTAGAGTTAATATACTTTGTGAAGAAATCTGCGGTGTTTCCGTATAGATGGGTGCTTGTGCAGTTTGGTGCATTCATCGTGTTGTGTGGCGCCACGCATCTCATTAACTTGTGGACTTTCAACATGCATTCTAGGACTGTGGCTATAGTTATGACTACTGCCAAGGTTCTGACTGCTGTGGTGTCGTGTGCCACGGCGTTGATGCTTGTGCATATAATTCCTGACTTGTTGAGTGTTAAGACTAGGGAGTTGTTTTTGAAGAATAAGGCTGCGGAGCTTGATAGAGAAATGGGGCTGATTAGGACTCAGGAGGAAACTGGTCGGCATGTTAGGATGCTGACCCATGAGATCAGGAGTACTCTTGATAGGCATACTATACTGAAAACCACACTGGTTGAGTTAGGTAGGACTTTGGCGTTGGAAGAGTGTGCGTTGTGGATGCCCACACGGACTGCGTTGGAGTTGCAGCTATCGTATACACTCCGTCAGCAGAATCCTGTAGGACATACCGTACCCATACATCTTCCTGTGATCAATCAAGTGTTTAGTAGCAACCGTGCCGTGAAGATATCGCCGAATTCCCCAGTGGCAAGACTTAGGCCACTTGTGGGAAAGCATATGCCTGGAGAGGTTGTTGCAGTTCGCGTCCCTCTCCTGCACCTCTCGAACTTCCAAATCAATGATTGGCCAGAGCTCTCAACTAAACGTTATGCCTTGATGGTTTTGATGCTCCCTTGTGACAGTGCAAGGCAATGGCATGTGCATGAGTTAGAGCTTGTTGAGGTGGTTGCTGACCAGGTAGCAGTTGCTCTCTCACATGCTGCGATCTTAGAAGAGTCAAGGAGGGCAAGGGATCTACTAATGGAGCAGAATATTGCACTCGATCTGGCTAGGAGGGAAGCAGAAACAGCGATTCGTGCTCGCAACGATTTCTTGGCAGTAATGAACCATGAAATGAGAACTCCGATGCACGCAATTATTGCTCTTTCTTCATTGCTGCAGGAAACTGAGCTGACACCGGAGCAGCGTCTAATGGTTGAGACAATATTGAAGAGCAGCAACCTTTTGGCTACTCTGATAAATGATGTACTAGACCTTTCAAGACTTGAAGATGGCAGCCTTCAACTTGACATAGCAACTTTTAACCTCCATTCTGTATTCATAGAGGTTCATAATTTAGTTAAGCCTGTTGCATCTGTGAAAAAGTTGTCAGTTACACTAAATTTAGCAGCAGATTTGCCAGTTTATGCGATTGGTGATGAAAAGCGCCTTCTACAAATTATTCTAAATGTTGTTGGGAATGCTGTCAAGTTTTCAAAAGAAGGGAGCATCTCAATTACTGCTTTTGTTGCGAAATCAGAATCTCTAAGAGATTTCCGTGCTGCTGACTTTTTTCCTGTGCAAAGTGATAATCACTTTTATCTGCGTGTACAGGTAAAAGATTCAGGATCTGGAATCAATCCCCAGGATCTTCCGAAGTTATTCACCAAATTTGCACAAAATCAGTCAGTAGCTACTCGCAATTCTGGTGGAAGTGGACTTGGTCTTGCAATTTGTAAGAGATTTGTAAATCTTATGGAGGGGCATATTTGGATTGAAAGTGATGGTCTGGGCAAGGGATGCACTTCTACTTTCATTGTGAAACTCGGCTATCCGGAGCGATCAAATGAGTCTAAGCTGCCTTTTTTGCCTAAGATGCACACAACTCATGTTCAAACAAACTTTCCAAGGTTGAAAGTTCTTGTCATGGATGATAATGGAGGCAGACTAATCGAGATTGGCACCATCACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000160 GO:0001101 GO:0002237 GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009308 GO:0009408 GO:0009593 GO:0009605 GO:0009607 GO:0009617 GO:0009625 GO:0009628 GO:0009651 GO:0009690 GO:0009719 GO:0009720 GO:0009723 GO:0009725 GO:0009726 GO:0009727 GO:0009733 GO:0009737 GO:0009739 GO:0009743 GO:0009755 GO:0009756 GO:0009873 GO:0009888 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010087 GO:0010104 GO:0010105 GO:0010119 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0016999 GO:0017000 GO:0017144 GO:0018106 GO:0018193 GO:0018202 GO:0019538 GO:0023051 GO:0023052 GO:0023057 GO:0032502 GO:0032870 GO:0033036 GO:0033037 GO:0033554 GO:0033993 GO:0034754 GO:0035556 GO:0036211 GO:0038023 GO:0038199 GO:0042221 GO:0042445 GO:0042545 GO:0042562 GO:0042742 GO:0042743 GO:0042802 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0046483 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048856 GO:0050665 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051239 GO:0051301 GO:0051606 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0051740 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0060089 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070727 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071369 GO:0071495 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0072328 GO:0072593 GO:0097305 GO:0098542 GO:0140096 GO:1900140 GO:1901564 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:1903409 GO:2000026
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
GAF HATPase_c HisKA Response_reg

Protein Analysis

634

Amino Acids

71.02

Weight (kDa)

7.71

Isoelectric Point (pI)

47.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ETR1_N PF25487 17 - 115 1e-39 Ethylene receptor 1-like, N-terminal domain
GAF PF01590 158 - 307 1.6e-12 GAF domain
HisKA PF00512 343 - 408 2.6e-19 His Kinase A (phospho-acceptor) domain
HATPase_c PF02518 455 - 585 4.1e-25 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 197, 1889
AccI GTMKAC 1 cut(s) 584
AccII CGCG 1 cut(s) 753
AccIII TCCGGA 1 cut(s) 1762
AciI CCGC 3 cut(s) 26, 140, 380
AclI AACGTT 1 cut(s) 814
AclWI GGATC 3 cut(s) 969, 1564, 1584
AcoI YGGCCR 3 cut(s) 32, 36, 794
AcsI RAATTY 3 cut(s) 685, 1330, 1598
AcyI GRCGYC 1 cut(s) 198
AfaI GTAC 4 cut(s) 466, 621, 1197, 1539
AfiI CCNNNNNNNGG 1 cut(s) 716
AjnI CCWGG 3 cut(s) 730, 903, 1572
AluBI AGCT 8 cut(s) 46, 385, 577, 802, 883, 1120, 1622, 1786
AluI AGCT 8 cut(s) 46, 385, 577, 802, 883, 1120, 1622, 1786
Alw21I GWGCWC 2 cut(s) 804, 1030
Alw26I GTCTC 1 cut(s) 1142
AlwI GGATC 3 cut(s) 969, 1564, 1584
AlwNI CAGNNNCTG 1 cut(s) 1559
Aor13HI TCCGGA 1 cut(s) 1762
AoxI GGCC 5 cut(s) 6, 32, 36, 707, 794
ApoI RAATTY 3 cut(s) 685, 1330, 1598
Asp700I GAANNNNTTC 1 cut(s) 1589
AspLEI GCGC 2 cut(s) 200, 1377
AsuHPI GGTGA 2 cut(s) 1376, 1585
BalI TGGCCA 1 cut(s) 796
BanI GGYRCC 2 cut(s) 197, 1889
BanII GRGCYC 1 cut(s) 804
Bbv12I GWGCWC 2 cut(s) 804, 1030
BccI CCATC 5 cut(s) 150, 820, 1214, 1706, 1901
BceAI ACGGC 2 cut(s) 318, 653
BcgI CGANNNNNNTGC 2 cut(s) 1861, 1895
BciT130I CCWGG 3 cut(s) 732, 905, 1574
BclI TGATCA 2 cut(s) 51, 639
BcoDI GTCTC 1 cut(s) 1142
BfaI CTAG 5 cut(s) 110, 240, 351, 999, 1199
BfmI CTRYAG 3 cut(s) 252, 606, 1106
BfoI RGCGCY 2 cut(s) 201, 1378
BglI GCCNNNNNGGC 1 cut(s) 31
BmcAI AGTACT 1 cut(s) 466
Bme1390I CCNGG 3 cut(s) 732, 905, 1574
BmiI GGNNCC 2 cut(s) 199, 1891
BmrFI CCNGG 3 cut(s) 732, 905, 1574
BmrI ACTGGG 1 cut(s) 686
BmuI ACTGGG 1 cut(s) 686
BpmI CTGGAG 1 cut(s) 753
BsaHI GRCGYC 1 cut(s) 198
BsaJI CCNNGG 4 cut(s) 270, 300, 1572, 1835
BsaWI WCCGGW 2 cut(s) 1126, 1762
BsaXI ACNNNNNCTCC 2 cut(s) 726, 756
Bsc4I CCNNNNNNNGG 1 cut(s) 716
Bse118I RCCGGY 1 cut(s) 34
Bse1I ACTGG 4 cut(s) 430, 504, 692, 1349
Bse3DI GCAATG 3 cut(s) 35, 866, 1100
BseAI TCCGGA 1 cut(s) 1762
BseBI CCWGG 3 cut(s) 732, 905, 1574
BseDI CCNNGG 4 cut(s) 270, 300, 1572, 1835
BseGI GGATG 4 cut(s) 447, 552, 1733, 1864
BseLI CCNNNNNNNGG 1 cut(s) 716
BseMI GCAATG 3 cut(s) 35, 866, 1100
BseMII CTCAG 2 cut(s) 428, 1107
BseNI ACTGG 4 cut(s) 430, 504, 692, 1349
BseX3I CGGCCG 1 cut(s) 36
BsgI GTGCAG 2 cut(s) 188, 749
Bsh1236I CGCG 1 cut(s) 753
Bsh1285I CGRYCG 1 cut(s) 39
BshFI GGCC 5 cut(s) 8, 34, 38, 709, 796
BshNI GGYRCC 2 cut(s) 197, 1889
BsiEI CGRYCG 1 cut(s) 39
BsiHKAI GWGCWC 2 cut(s) 804, 1030
BsiSI CCGG 3 cut(s) 35, 1127, 1763
BslFI GGGAC 1 cut(s) 740
BslI CCNNNNNNNGG 1 cut(s) 716
BsmAI GTCTC 1 cut(s) 1142
BsmFI GGGAC 1 cut(s) 740
BsmI GAATGC 3 cut(s) 179, 235, 1414
BsnI GGCC 5 cut(s) 8, 34, 38, 709, 796
Bsp1286I GDGCHC 2 cut(s) 804, 1030
Bsp13I TCCGGA 1 cut(s) 1762
Bsp1407I TGTACA 1 cut(s) 1537
Bsp143I GATC 9 cut(s) 51, 456, 639, 933, 961, 991, 1556, 1576, 1769
BspACI CCGC 3 cut(s) 26, 140, 380
BspANI GGCC 5 cut(s) 8, 34, 38, 709, 796
BspCNI CTCAG 2 cut(s) 427, 1108
BspEI TCCGGA 1 cut(s) 1762
BspFNI CGCG 1 cut(s) 753
BspLI GGNNCC 2 cut(s) 199, 1891
BspMAI CTGCAG 1 cut(s) 1110
BspPI GGATC 3 cut(s) 969, 1564, 1584
BspQI GCTCTTC 1 cut(s) 1154
BspT107I GGYRCC 2 cut(s) 197, 1889
BsrDI GCAATG 3 cut(s) 35, 866, 1100
BsrFI RCCGGY 1 cut(s) 34
BsrGI TGTACA 1 cut(s) 1537
BsrI ACTGG 4 cut(s) 430, 504, 692, 1349
BssAI RCCGGY 1 cut(s) 34
BssECI CCNNGG 4 cut(s) 270, 300, 1572, 1835
BssMI GATC 9 cut(s) 51, 456, 639, 933, 961, 991, 1556, 1576, 1769
BssNAI GTATAC 1 cut(s) 585
BssNI GRCGYC 1 cut(s) 198
BssT1I CCWWGG 2 cut(s) 270, 1835
Bst1107I GTATAC 1 cut(s) 585
Bst2UI CCWGG 3 cut(s) 732, 905, 1574
Bst4CI ACNGT 5 cut(s) 17, 247, 619, 665, 851
Bst6I CTCTTC 3 cut(s) 525, 936, 1154
BstACI GRCGYC 1 cut(s) 198
BstAPI GCANNNNNTGC 2 cut(s) 1088, 1728
BstAUI TGTACA 1 cut(s) 1537
BstC8I GCNNGC 3 cut(s) 36, 1030, 1080
BstDEI CTNAG 8 cut(s) 414, 704, 937, 1116, 1475, 1782, 1800, 1899
BstDSI CCRYGG 1 cut(s) 300
BstF5I GGATG 4 cut(s) 447, 552, 1733, 1864
BstFNI CGCG 1 cut(s) 753
BstH2I RGCGCY 2 cut(s) 201, 1378
BstHHI GCGC 2 cut(s) 200, 1377
BstKTI GATC 9 cut(s) 54, 459, 642, 936, 964, 994, 1559, 1579, 1772
BstMAI GTCTC 1 cut(s) 1142
BstMBI GATC 9 cut(s) 51, 456, 639, 933, 961, 991, 1556, 1576, 1769
BstMCI CGRYCG 1 cut(s) 39
BstMWI GCNNNNNNNGC 8 cut(s) 31, 1016, 1025, 1088, 1457, 1728, 1795, 1804
BstNI CCWGG 3 cut(s) 732, 905, 1574
BstNSI RCATGY 4 cut(s) 235, 437, 869, 929
BstSCI CCNGG 3 cut(s) 730, 903, 1572
BstSFI CTRYAG 3 cut(s) 252, 606, 1106
BstUI CGCG 1 cut(s) 753
BstX2I RGATCY 3 cut(s) 961, 1556, 1576
BstYI RGATCY 3 cut(s) 961, 1556, 1576
BstZ17I GTATAC 1 cut(s) 585
BstZI CGGCCG 1 cut(s) 36
BsuRI GGCC 5 cut(s) 8, 34, 38, 709, 796
BtgI CCRYGG 1 cut(s) 300
BtsCI GGATG 4 cut(s) 447, 552, 1733, 1864
BtsIMutI CAGTG 3 cut(s) 497, 699, 856
Cac8I GCNNGC 3 cut(s) 36, 1030, 1080
CaiI CAGNNNCTG 1 cut(s) 1559
CfoI GCGC 2 cut(s) 200, 1377
Cfr10I RCCGGY 1 cut(s) 34
CseI GACGC 2 cut(s) 742, 1124
CsiI ACCWGGT 1 cut(s) 903
Csp6I GTAC 4 cut(s) 465, 620, 1196, 1538
CspCI CAANNNNNGTGG 4 cut(s) 484, 519, 1618, 1653
CviAII CATG 9 cut(s) 232, 434, 452, 866, 872, 926, 1058, 1817, 1855
CviQI GTAC 4 cut(s) 465, 620, 1196, 1538
DdeI CTNAG 8 cut(s) 414, 704, 937, 1116, 1475, 1782, 1800, 1899
DinI GGCGCC 1 cut(s) 199
DpnI GATC 9 cut(s) 53, 458, 641, 935, 963, 993, 1558, 1578, 1771
DpnII GATC 9 cut(s) 51, 456, 639, 933, 961, 991, 1556, 1576, 1769
EaeI YGGCCR 3 cut(s) 32, 36, 794
EagI CGGCCG 1 cut(s) 36
Eam1104I CTCTTC 3 cut(s) 525, 936, 1154
EarI CTCTTC 3 cut(s) 525, 936, 1154
Ecl136II GAGCTC 1 cut(s) 802
EclXI CGGCCG 1 cut(s) 36
Eco130I CCWWGG 2 cut(s) 270, 1835
Eco147I AGGCCT 1 cut(s) 8
Eco24I GRGCYC 1 cut(s) 804
Eco32I GATATC 1 cut(s) 678
Eco52I CGGCCG 1 cut(s) 36
Eco53kI GAGCTC 1 cut(s) 802
EcoICRI GAGCTC 1 cut(s) 802
EcoRI GAATTC 1 cut(s) 685
EcoRII CCWGG 3 cut(s) 730, 903, 1572
EcoRV GATATC 1 cut(s) 678
EcoT14I CCWWGG 2 cut(s) 270, 1835
EcoT22I ATGCAT 1 cut(s) 237
EcoT38I GRGCYC 1 cut(s) 804
EgeI GGCGCC 1 cut(s) 199
EheI GGCGCC 1 cut(s) 199
ErhI CCWWGG 2 cut(s) 270, 1835
FaeI CATG 9 cut(s) 235, 437, 455, 869, 875, 929, 1061, 1820, 1858
FaqI GGGAC 1 cut(s) 740
FatI CATG 9 cut(s) 231, 433, 451, 865, 871, 925, 1057, 1816, 1854
FauNDI CATATG 1 cut(s) 726
FbaI TGATCA 2 cut(s) 51, 639
FblI GTMKAC 1 cut(s) 584
FokI GGATG 4 cut(s) 454, 559, 1740, 1871
FriOI GRGCYC 1 cut(s) 804
FseI GGCCGGCC 1 cut(s) 38
FspBI CTAG 5 cut(s) 110, 240, 351, 999, 1199
GlaI GCGC 2 cut(s) 199, 1376
GsuI CTGGAG 1 cut(s) 753
HaeII RGCGCY 2 cut(s) 201, 1378
HaeIII GGCC 5 cut(s) 8, 34, 38, 709, 796
HapII CCGG 3 cut(s) 35, 1127, 1763
HgaI GACGC 2 cut(s) 742, 1124
HhaI GCGC 2 cut(s) 200, 1377
Hin1I GRCGYC 1 cut(s) 198
Hin1II CATG 9 cut(s) 235, 437, 455, 869, 875, 929, 1061, 1820, 1858
Hin6I GCGC 2 cut(s) 198, 1375
HinP1I GCGC 2 cut(s) 198, 1375
HinfI GANTC 8 cut(s) 412, 601, 944, 1021, 1469, 1550, 1563, 1778
HpaII CCGG 3 cut(s) 35, 1127, 1763
HphI GGTGA 2 cut(s) 1376, 1585
Hpy166II GTNNAC 4 cut(s) 222, 585, 1538, 1646
Hpy188I TCNGA 6 cut(s) 73, 279, 1074, 1185, 1468, 1584
Hpy8I GTNNAC 4 cut(s) 222, 585, 1538, 1646
HpyAV CCTTC 3 cut(s) 1238, 1388, 1424
HpyCH4III ACNGT 5 cut(s) 17, 247, 619, 665, 851
HpyCH4IV ACGT 1 cut(s) 814
HpyF10VI GCNNNNNNNGC 8 cut(s) 31, 1016, 1025, 1088, 1457, 1728, 1795, 1804
HpyF3I CTNAG 8 cut(s) 414, 704, 937, 1116, 1475, 1782, 1800, 1899
HpySE526I ACGT 1 cut(s) 814
Hsp92I GRCGYC 1 cut(s) 198
Hsp92II CATG 9 cut(s) 235, 437, 455, 869, 875, 929, 1061, 1820, 1858
HspAI GCGC 2 cut(s) 198, 1375
KasI GGCGCC 1 cut(s) 197
Kpn2I TCCGGA 1 cut(s) 1762
KroI GCCGGC 1 cut(s) 34
KroNI GCCGGC 1 cut(s) 36
Ksp22I TGATCA 2 cut(s) 51, 639
Kzo9I GATC 9 cut(s) 51, 456, 639, 933, 961, 991, 1556, 1576, 1769
LguI GCTCTTC 1 cut(s) 1154
LmnI GCTCC 6 cut(s) 382, 843, 973, 1129, 1434, 1765
MabI ACCWGGT 1 cut(s) 903
MaeI CTAG 5 cut(s) 110, 240, 351, 999, 1199
MaeII ACGT 1 cut(s) 814
MaeIII GTNAC 3 cut(s) 11, 845, 1321
MalI GATC 9 cut(s) 53, 458, 641, 935, 963, 993, 1558, 1578, 1771
MboI GATC 9 cut(s) 51, 456, 639, 933, 961, 991, 1556, 1576, 1769
MflI RGATCY 3 cut(s) 961, 1556, 1576
MhlI GDGCHC 2 cut(s) 804, 1030
MlsI TGGCCA 1 cut(s) 796
MluNI TGGCCA 1 cut(s) 796
Mly113I GGCGCC 1 cut(s) 198
MlyI GAGTC 3 cut(s) 406, 953, 1787
MmeI TCCRAC 2 cut(s) 507, 546
Mox20I TGGCCA 1 cut(s) 796
Mph1103I ATGCAT 1 cut(s) 237
MroI TCCGGA 1 cut(s) 1762
MroNI GCCGGC 1 cut(s) 34
MroXI GAANNNNTTC 1 cut(s) 1589
MscI TGGCCA 1 cut(s) 796
MseI TTAA 5 cut(s) 116, 213, 345, 1251, 1290
MslI CAYNNNNRTG 1 cut(s) 870
Msp20I TGGCCA 1 cut(s) 796
MspI CCGG 3 cut(s) 35, 1127, 1763
MspR9I CCNGG 3 cut(s) 732, 905, 1574
Mva1269I GAATGC 3 cut(s) 179, 235, 1414
MvaI CCWGG 3 cut(s) 732, 905, 1574
MvnI CGCG 1 cut(s) 753
MwoI GCNNNNNNNGC 8 cut(s) 31, 1016, 1025, 1088, 1457, 1728, 1795, 1804
NaeI GCCGGC 1 cut(s) 36
NarI GGCGCC 1 cut(s) 198
NdeI CATATG 1 cut(s) 726
NdeII GATC 9 cut(s) 51, 456, 639, 933, 961, 991, 1556, 1576, 1769
NgoMIV GCCGGC 1 cut(s) 34
NlaIII CATG 9 cut(s) 235, 437, 455, 869, 875, 929, 1061, 1820, 1858
NlaIV GGNNCC 2 cut(s) 199, 1891
NmeAIII GCCGAG 1 cut(s) 1734
NmuCI GTSAC 1 cut(s) 845
NsiI ATGCAT 1 cut(s) 237
NspI RCATGY 4 cut(s) 235, 437, 869, 929
PceI AGGCCT 1 cut(s) 8
PciSI GCTCTTC 1 cut(s) 1154
PctI GAATGC 3 cut(s) 179, 235, 1414
PdiI GCCGGC 1 cut(s) 36
PdmI GAANNNNTTC 1 cut(s) 1589
PfeI GAWTC 5 cut(s) 601, 1021, 1469, 1550, 1563
PflFI GACNNNGTC 1 cut(s) 1650
PleI GAGTC 3 cut(s) 406, 952, 1786
PluTI GGCGCC 1 cut(s) 201
PpsI GAGTC 3 cut(s) 406, 952, 1786
Psp124BI GAGCTC 1 cut(s) 804
Psp1406I AACGTT 1 cut(s) 814
Psp6I CCWGG 3 cut(s) 730, 903, 1572
PspGI CCWGG 3 cut(s) 730, 903, 1572
PspN4I GGNNCC 2 cut(s) 199, 1891
PstI CTGCAG 1 cut(s) 1110
PstNI CAGNNNCTG 1 cut(s) 1559
PsuI RGATCY 3 cut(s) 961, 1556, 1576
PsyI GACNNNGTC 1 cut(s) 1650
RigI GGCCGGCC 1 cut(s) 38
RsaI GTAC 4 cut(s) 466, 621, 1197, 1539
RsaNI GTAC 4 cut(s) 465, 620, 1196, 1538
RseI CAYNNNNRTG 1 cut(s) 870
SacI GAGCTC 1 cut(s) 804
SapI GCTCTTC 1 cut(s) 1154
SaqAI TTAA 5 cut(s) 116, 213, 345, 1251, 1290
Sau3AI GATC 9 cut(s) 51, 456, 639, 933, 961, 991, 1556, 1576, 1769
ScaI AGTACT 1 cut(s) 466
SchI GAGTC 3 cut(s) 406, 953, 1787
ScrFI CCNGG 3 cut(s) 732, 905, 1574
SduI GDGCHC 2 cut(s) 804, 1030
SexAI ACCWGGT 1 cut(s) 903
SfcI CTRYAG 3 cut(s) 252, 606, 1106
SfoI GGCGCC 1 cut(s) 199
SmiMI CAYNNNNRTG 1 cut(s) 870
SseBI AGGCCT 1 cut(s) 8
SsiI CCGC 3 cut(s) 26, 140, 380
SspDI GGCGCC 1 cut(s) 197
SspI AATATT 2 cut(s) 982, 1155
SspMI CTAG 5 cut(s) 110, 240, 351, 999, 1199
SstI GAGCTC 1 cut(s) 804
StuI AGGCCT 1 cut(s) 8
StyD4I CCNGG 3 cut(s) 730, 903, 1572
StyI CCWWGG 2 cut(s) 270, 1835
TaaI ACNGT 5 cut(s) 17, 247, 619, 665, 851
TaiI ACGT 1 cut(s) 817
TaqI TCGA 4 cut(s) 21, 773, 990, 1881
TatI WGTACW 3 cut(s) 464, 1195, 1537
TauI GCSGC 1 cut(s) 28
TfiI GAWTC 5 cut(s) 601, 1021, 1469, 1550, 1563
Tru1I TTAA 5 cut(s) 116, 213, 345, 1251, 1290
Tru9I TTAA 5 cut(s) 116, 213, 345, 1251, 1290
TscAI CASTG 3 cut(s) 504, 699, 856
TseFI GTSAC 1 cut(s) 845
Tsp45I GTSAC 1 cut(s) 845
TspDTI ATGAA 8 cut(s) 172, 1067, 1074, 1089, 1258, 1268, 1383, 1732
TspGWI ACGGA 4 cut(s) 138, 571, 581, 1475
TspRI CASTG 3 cut(s) 504, 699, 856
Tth111I GACNNNGTC 1 cut(s) 1650
XapI RAATTY 3 cut(s) 685, 1330, 1598
XbaI TCTAGA 1 cut(s) 109
XceI RCATGY 4 cut(s) 235, 437, 869, 929
XmiI GTMKAC 1 cut(s) 584
XmnI GAANNNNTTC 1 cut(s) 1589
XspI CTAG 5 cut(s) 110, 240, 351, 999, 1199
ZrmI AGTACT 1 cut(s) 466
Zsp2I ATGCAT 1 cut(s) 237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.