pycom15g23880

May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0003094
Physical Location & Seq
Forward (+)
18018989 .. 18023031
4043 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g23880.4

Sequence Viewer

Length: 2232 bp
ATGTTGGCATGCAACTGTATTGAGCCACAATGGCCGGCTGATGAATTGCTGATGAAATATCAGTACATTTCAGATTTCTTTATTGCGCTTGCTTATTTCTCCATCCCACTAGAGTTGATCTACTTTGTCAAGAAGTCCGCAGTGTTTCCATACAGATGGGTCCTCGTACAATTTGGTGCTTTCATTGTACTGTGTGGGGCGACTCATCTTATCAACTTATGGACGTTCAGCATGCATTCAAGAACTGTGGCCATAGTAATGACCACGGCAAAGGTTTTAACTGCAGTGGTGTCATGCGCAACTGCCCTTATGCTTGTACATATTATACCTGATTTATTGAGTGTTAAAACTAGAGAACTATTCTTGAAGAACAAGGCTGCAGAGCTCGATAGAGAAATGGGCCTTATCCGCACACAGGAGGAAACAGGTCGACATGTCAGGATGTTGACCCATGAAATCAGAAGCACTCTTGATAGACATACTATACTTAAAACTACACTTGTCGAGTTAGGTAGAACTTTGGCATTGGAAGAGTGTGCCTTGTGGATGCCAACGCGTACTGGATTAGAGCTTCAACTATCCTATACACTCCGTCAGCAGAATCCAGTAGGATATACCGTACCCATTCATCTTCCTGTGATCAATCAAGTATTTAGTAGCAACCGTGCAGTAAAAATATCACCAAATTCTCCAGTGGCAAGACTGAGGCAACTTGCAGGAAGGCACATTCCTGGGGAAGTTGTTGCAGTTCGTGTGCCCCTTTTACATCTCTCTAACTTCCAAATTAATGACTGGCCTGAGCTCTCAACAAAACGCTATGCTTTGATGGTCTTGATGCTTCCCTCAGATAGTGCAAGGCAGTGGCACGTTCATGAGTTAGAATTGGTAGAAGTGGTTGCTGATCAGAAAGGTTGCGGTTGCTCTGTCACATGCTGCAATATTAGAAGAGTCAATGAGGGCAAGGGATCGATCCTTATGGAGCAGAATGTTGCGCTCGATTTAGCCAGGAGAGAAGCGGAGACTGCAATTCGTGCTCGCAATGATTTCTTGGCTGTTATGAACCATGAGATGAGAACTCCCATGCATGCAATTATTGCTCTTTCTTCTTTGCTACAGGAAACTGAGCTCACACCTGAGCAGCGTCTCATGGTTGAAACGATATTAAGGAGCAGCAACCTATTGGCTACCCTCGTAAATGATGTTTTGGATCTTTCAAGGCTTGAAGATGGCAGCCTTCAACTTGAAATAGCAACTTTTAACCTCCATTCCGTATTTAGAGAGGTTCATAATATGATTAAGCCTGTTGCATCTATCAAAAGGTTGTCAGTTACATTGAATATAGCTGCAGATTTGCCAATGTATGCCATAGGTGATGAAAAGCGTCTTATGCAAACTATTCTAAATGTTGTTGGGAATGCTGTGAAGTTCTCAAAAGAAGGGAGCATCTCAATCACAGGTTTTGTTGCAAAATCAGAATCTTTACGAGATTTCCGGGCTCCTGATTTCTTTCCAGTGCAAAGTGATAATCACTTTTATCTGCGCGTGCAGGTCAAAGATTCAGGATCTGGAATCAATCCTCAGGATATCCCAAAGCTATTTACCAAATTTGCACAAACTCAGACTTTAGCTACCCGAAATTCTGGTGGTAGTGGACTTGGCCTGGCAATTTGTAAGAGATTTGTAAATCTTATGGAAGGGCATATTTGGATTGAAAGTGAAGGTCTTGGCAAGGGATGCACAGCCACTTTCATTGTGAAACTCGGATTTCCAGAGCGTTCGAATGAGTCTAAGCTGCCTTTTGGACCCAAGCTGCAAGCAAATCATGTTCAAACTAACTTTCCAGGGTTGAAAGTCCTTGTCATGGATGATAATGGGGTCAGCAGGTCAGTGACAAAGGGACTCCTTGCGCACCTAGGATGTGATGTAACAGCTGTAAGCTTAATCGATGAGTCATTGCATGTTATTTCACAAGAGCACAAGGTGGTGTTCATGGATGTGAGCATGCCAGGAATCGATGGTTATGAACTTGCTGTCCGTATACATGAAAAGTTCACAAAACGTCATGAGCGGCCGGCATTAGTGGCACTTACCGGAAGCATAGACAAGATTACAAAGGAGAACTGCATGAGGGTTGGTGTGGATGGTGTTATACTAAAACCGGTTTCAGTTGATAAAATGAGGAGTGTTTTATCAGAAATATTAGAGCATCGAGTCCTATTCGAGGCCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000160 GO:0001101 GO:0002237 GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009308 GO:0009408 GO:0009593 GO:0009605 GO:0009607 GO:0009617 GO:0009625 GO:0009628 GO:0009651 GO:0009690 GO:0009719 GO:0009720 GO:0009723 GO:0009725 GO:0009726 GO:0009727 GO:0009733 GO:0009737 GO:0009739 GO:0009743 GO:0009755 GO:0009756 GO:0009873 GO:0009888 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010087 GO:0010104 GO:0010105 GO:0010119 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0016999 GO:0017000 GO:0017144 GO:0018106 GO:0018193 GO:0018202 GO:0019538 GO:0023051 GO:0023052 GO:0023057 GO:0032502 GO:0032870 GO:0033036 GO:0033037 GO:0033554 GO:0033993 GO:0034754 GO:0035556 GO:0036211 GO:0038023 GO:0038199 GO:0042221 GO:0042445 GO:0042545 GO:0042562 GO:0042742 GO:0042743 GO:0042802 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0046483 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048856 GO:0050665 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051239 GO:0051301 GO:0051606 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0051740 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0060089 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070727 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071369 GO:0071495 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0072328 GO:0072593 GO:0097305 GO:0098542 GO:0140096 GO:1900140 GO:1901564 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:1903409 GO:2000026
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
GAF HATPase_c HisKA Response_reg

Protein Analysis

744

Amino Acids

83.1

Weight (kDa)

8.31

Isoelectric Point (pI)

44.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 298, 1908
Acc36I ACCTGC 2 cut(s) 1537, 1872
AccBSI CCGCTC 1 cut(s) 2068
AccI GTMKAC 2 cut(s) 430, 2038
AccII CGCG 2 cut(s) 556, 1542
AciI CCGC 5 cut(s) 138, 409, 915, 1016, 2068
AclWI GGATC 4 cut(s) 964, 973, 1215, 1570
AcoI YGGCCR 3 cut(s) 32, 249, 2069
AcsI RAATTY 3 cut(s) 685, 1604, 1636
AdeI CACNNNGTG 1 cut(s) 1981
AfaI GTAC 6 cut(s) 65, 168, 189, 318, 559, 621
AfiI CCNNNNNNNGG 3 cut(s) 415, 1861, 2221
AflIII ACRYGT 2 cut(s) 433, 554
AgeI ACCGGT 1 cut(s) 2158
AjnI CCWGG 5 cut(s) 730, 1004, 1659, 1840, 2005
AloI GAACNNNNNNTCC 2 cut(s) 2016, 2048
Alw21I GWGCWC 5 cut(s) 387, 804, 1036, 1128, 1977
Alw26I GTCTC 2 cut(s) 1013, 1148
AlwI GGATC 4 cut(s) 964, 973, 1215, 1570
AlwNI CAGNNNCTG 1 cut(s) 1565
AoxI GGCC 7 cut(s) 32, 249, 400, 794, 1657, 2069, 2223
ApeKI GCWGC 8 cut(s) 377, 933, 1138, 1170, 1230, 1343, 1792, 1810
ApoI RAATTY 3 cut(s) 685, 1604, 1636
AseI ATTAAT 1 cut(s) 786
AsiGI ACCGGT 1 cut(s) 2158
AspA2I CCTAGG 1 cut(s) 1912
AspLEI GCGC 5 cut(s) 88, 299, 994, 1542, 1909
AspS9I GGNCC 3 cut(s) 160, 400, 1802
AsuC2I CCSGG 1 cut(s) 1493
AsuHPI GGTGA 2 cut(s) 672, 1382
AsuII TTCGAA 1 cut(s) 1778
AvaII GGWCC 2 cut(s) 160, 1802
AvrII CCTAGG 1 cut(s) 1912
AxyI CCTNAGG 1 cut(s) 1578
BaeGI GKGCMC 1 cut(s) 759
BalI TGGCCA 1 cut(s) 251
BanII GRGCYC 4 cut(s) 387, 804, 1128, 1498
Bbv12I GWGCWC 5 cut(s) 387, 804, 1036, 1128, 1977
BbvI GCAGC 8 cut(s) 364, 920, 1150, 1182, 1242, 1330, 1779, 1797
BccI CCATC 6 cut(s) 110, 150, 820, 1220, 2009, 2135
BceAI ACGGC 1 cut(s) 282
BciT130I CCWGG 5 cut(s) 732, 1006, 1661, 1842, 2007
BclI TGATCA 2 cut(s) 639, 901
BcnI CCSGG 1 cut(s) 1493
BcoDI GTCTC 2 cut(s) 1013, 1148
BfaI CTAG 3 cut(s) 110, 351, 1913
BfmI CTRYAG 4 cut(s) 282, 378, 1112, 1344
BfuAI ACCTGC 2 cut(s) 1537, 1872
BglI GCCNNNNNGGC 1 cut(s) 31
BisI GCNGC 9 cut(s) 378, 934, 1139, 1171, 1231, 1344, 1793, 1811, 2069
BlnI CCTAGG 1 cut(s) 1912
BlsI GCNGC 9 cut(s) 379, 935, 1140, 1172, 1232, 1345, 1794, 1812, 2070
Bme1390I CCNGG 6 cut(s) 732, 1006, 1493, 1661, 1842, 2007
Bme18I GGWCC 2 cut(s) 160, 1802
BmgT120I GGNCC 3 cut(s) 160, 400, 1802
BmiI GGNNCC 3 cut(s) 161, 1497, 1804
BmrFI CCNGG 6 cut(s) 732, 1006, 1493, 1661, 1842, 2007
BmsI GCATC 6 cut(s) 537, 825, 1316, 1452, 1724, 2215
BpmI CTGGAG 1 cut(s) 675
Bpu10I CCTNAGC 2 cut(s) 798, 1134
Bpu14I TTCGAA 1 cut(s) 1778
BpuMI CCSGG 1 cut(s) 1493
Bsa29I ATCGAT 3 cut(s) 968, 1944, 2013
BsaJI CCNNGG 4 cut(s) 264, 731, 1841, 1912
BsaWI WCCGGW 2 cut(s) 2090, 2158
Bsc4I CCNNNNNNNGG 3 cut(s) 415, 1861, 2221
Bse118I RCCGGY 3 cut(s) 34, 2071, 2158
Bse1I ACTGG 5 cut(s) 565, 605, 692, 797, 1511
Bse21I CCTNAGG 1 cut(s) 1578
Bse3DI GCAATG 2 cut(s) 1045, 1952
BseBI CCWGG 5 cut(s) 732, 1006, 1661, 1842, 2007
BseCI ATCGAT 3 cut(s) 968, 1944, 2013
BseDI CCNNGG 4 cut(s) 264, 731, 1841, 1912
BseGI GGATG 8 cut(s) 102, 447, 552, 1739, 1870, 1922, 1999, 2146
BseLI CCNNNNNNNGG 3 cut(s) 415, 1861, 2221
BseMI GCAATG 2 cut(s) 1045, 1952
BseMII CTCAG 7 cut(s) 695, 789, 858, 1113, 1125, 1592, 1631
BseNI ACTGG 5 cut(s) 565, 605, 692, 797, 1511
BseRI GAGGAG 1 cut(s) 2194
BseSI GKGCMC 1 cut(s) 759
BseX3I CGGCCG 1 cut(s) 2069
BseXI GCAGC 8 cut(s) 364, 920, 1150, 1182, 1242, 1330, 1779, 1797
BsgI GTGCAG 2 cut(s) 687, 1565
Bsh1236I CGCG 2 cut(s) 556, 1542
Bsh1285I CGRYCG 1 cut(s) 2072
BshFI GGCC 7 cut(s) 34, 251, 402, 796, 1659, 2071, 2225
BshTI ACCGGT 1 cut(s) 2158
BshVI ATCGAT 3 cut(s) 968, 1944, 2013
BsiEI CGRYCG 1 cut(s) 2072
BsiHKAI GWGCWC 5 cut(s) 387, 804, 1036, 1128, 1977
BsiSI CCGG 5 cut(s) 35, 1492, 2072, 2091, 2159
BslFI GGGAC 1 cut(s) 1911
BslI CCNNNNNNNGG 3 cut(s) 415, 1861, 2221
BsmAI GTCTC 2 cut(s) 1013, 1148
BsmBI CGTCTC 1 cut(s) 1148
BsmFI GGGAC 1 cut(s) 1911
BsmI GAATGC 2 cut(s) 235, 1420
BsnI GGCC 7 cut(s) 34, 251, 402, 796, 1659, 2071, 2225
Bsp119I TTCGAA 1 cut(s) 1778
Bsp1286I GDGCHC 7 cut(s) 387, 759, 804, 1036, 1128, 1498, 1977
Bsp1407I TGTACA 1 cut(s) 316
Bsp143I GATC 7 cut(s) 117, 639, 901, 965, 969, 1207, 1562
BspACI CCGC 5 cut(s) 138, 409, 915, 1016, 2068
BspANI GGCC 7 cut(s) 34, 251, 402, 796, 1659, 2071, 2225
BspCNI CTCAG 7 cut(s) 696, 790, 857, 1114, 1126, 1591, 1630
BspDI ATCGAT 3 cut(s) 968, 1944, 2013
BspFNI CGCG 2 cut(s) 556, 1542
BspHI TCATGA 2 cut(s) 871, 2062
BspLI GGNNCC 3 cut(s) 161, 1497, 1804
BspMAI CTGCAG 3 cut(s) 286, 382, 1348
BspMI ACCTGC 2 cut(s) 1537, 1872
BspPI GGATC 4 cut(s) 964, 973, 1215, 1570
BspT104I TTCGAA 1 cut(s) 1778
BsrBI CCGCTC 1 cut(s) 2068
BsrDI GCAATG 2 cut(s) 1045, 1952
BsrFI RCCGGY 3 cut(s) 34, 2071, 2158
BsrGI TGTACA 1 cut(s) 316
BsrI ACTGG 5 cut(s) 565, 605, 692, 797, 1511
BssAI RCCGGY 3 cut(s) 34, 2071, 2158
BssECI CCNNGG 4 cut(s) 264, 731, 1841, 1912
BssMI GATC 7 cut(s) 117, 639, 901, 965, 969, 1207, 1562
BssNAI GTATAC 1 cut(s) 2039
BssT1I CCWWGG 1 cut(s) 1912
Bst1107I GTATAC 1 cut(s) 2039
Bst2UI CCWGG 5 cut(s) 732, 1006, 1661, 1842, 2007
Bst4CI ACNGT 5 cut(s) 17, 192, 247, 619, 665
Bst6I CTCTTC 2 cut(s) 525, 940
BstAPI GCANNNNNTGC 3 cut(s) 1031, 1094, 1734
BstAUI TGTACA 1 cut(s) 316
BstBI TTCGAA 1 cut(s) 1778
BstDEI CTNAG 8 cut(s) 704, 798, 844, 1122, 1134, 1578, 1617, 1788
BstDSI CCRYGG 1 cut(s) 264
BstENI CCTNNNNNAGG 1 cut(s) 2219
BstF5I GGATG 8 cut(s) 102, 447, 552, 1739, 1870, 1922, 1999, 2146
BstFNI CGCG 2 cut(s) 556, 1542
BstHHI GCGC 5 cut(s) 88, 299, 994, 1542, 1909
BstKTI GATC 7 cut(s) 120, 642, 904, 968, 972, 1210, 1565
BstMAI GTCTC 2 cut(s) 1013, 1148
BstMBI GATC 7 cut(s) 117, 639, 901, 965, 969, 1207, 1562
BstMCI CGRYCG 1 cut(s) 2072
BstMWI GCNNNNNNNGC 8 cut(s) 31, 408, 1022, 1031, 1094, 1387, 1734, 2081
BstNI CCWGG 5 cut(s) 732, 1006, 1661, 1842, 2007
BstNSI RCATGY 7 cut(s) 12, 235, 437, 933, 1088, 1961, 2005
BstSCI CCNGG 6 cut(s) 730, 1004, 1491, 1659, 1840, 2005
BstSFI CTRYAG 4 cut(s) 282, 378, 1112, 1344
BstSLI GKGCMC 1 cut(s) 759
BstUI CGCG 2 cut(s) 556, 1542
BstV1I GCAGC 8 cut(s) 364, 920, 1150, 1182, 1242, 1330, 1779, 1797
BstX2I RGATCY 2 cut(s) 1207, 1562
BstXI CCANNNNNNTGG 1 cut(s) 156
BstYI RGATCY 2 cut(s) 1207, 1562
BstZ17I GTATAC 1 cut(s) 2039
BstZI CGGCCG 1 cut(s) 2069
Bsu15I ATCGAT 3 cut(s) 968, 1944, 2013
Bsu36I CCTNAGG 1 cut(s) 1578
BsuRI GGCC 7 cut(s) 34, 251, 402, 796, 1659, 2071, 2225
BsuTUI ATCGAT 3 cut(s) 968, 1944, 2013
BtgI CCRYGG 1 cut(s) 264
BtsCI GGATG 8 cut(s) 102, 447, 552, 1739, 1870, 1922, 1999, 2146
BtsI GCAGTG 3 cut(s) 147, 291, 866
BtsIMutI CAGTG 6 cut(s) 147, 291, 699, 866, 1518, 1893
BveI ACCTGC 2 cut(s) 1537, 1872
CaiI CAGNNNCTG 1 cut(s) 1565
CciI TCATGA 2 cut(s) 871, 2062
CfoI GCGC 5 cut(s) 88, 299, 994, 1542, 1909
Cfr10I RCCGGY 3 cut(s) 34, 2071, 2158
Cfr13I GGNCC 3 cut(s) 160, 400, 1802
ClaI ATCGAT 3 cut(s) 968, 1944, 2013
CseI GACGC 2 cut(s) 1130, 1370
Csp6I GTAC 6 cut(s) 64, 167, 188, 317, 558, 620
CspAI ACCGGT 1 cut(s) 2158
CspCI CAANNNNNGTGG 6 cut(s) 96, 131, 228, 263, 1732, 1767
CviQI GTAC 6 cut(s) 64, 167, 188, 317, 558, 620
DdeI CTNAG 8 cut(s) 704, 798, 844, 1122, 1134, 1578, 1617, 1788
DpnI GATC 7 cut(s) 119, 641, 903, 967, 971, 1209, 1564
DpnII GATC 7 cut(s) 117, 639, 901, 965, 969, 1207, 1562
DraIII CACNNNGTG 1 cut(s) 1981
EaeI YGGCCR 3 cut(s) 32, 249, 2069
EagI CGGCCG 1 cut(s) 2069
Eam1104I CTCTTC 2 cut(s) 525, 940
EarI CTCTTC 2 cut(s) 525, 940
Ecl136II GAGCTC 3 cut(s) 385, 802, 1126
EclXI CGGCCG 1 cut(s) 2069
Eco130I CCWWGG 1 cut(s) 1912
Eco24I GRGCYC 4 cut(s) 387, 804, 1128, 1498
Eco32I GATATC 1 cut(s) 1585
Eco47I GGWCC 2 cut(s) 160, 1802
Eco52I CGGCCG 1 cut(s) 2069
Eco53kI GAGCTC 3 cut(s) 385, 802, 1126
Eco81I CCTNAGG 1 cut(s) 1578
EcoICRI GAGCTC 3 cut(s) 385, 802, 1126
EcoNI CCTNNNNNAGG 1 cut(s) 2219
EcoO109I RGGNCCY 1 cut(s) 160
EcoRII CCWGG 5 cut(s) 730, 1004, 1659, 1840, 2005
EcoRV GATATC 1 cut(s) 1585
EcoT14I CCWWGG 1 cut(s) 1912
EcoT22I ATGCAT 2 cut(s) 237, 1086
EcoT38I GRGCYC 4 cut(s) 387, 804, 1128, 1498
ErhI CCWWGG 1 cut(s) 1912
Esp3I CGTCTC 1 cut(s) 1148
FaqI GGGAC 1 cut(s) 1911
FbaI TGATCA 2 cut(s) 639, 901
FblI GTMKAC 2 cut(s) 430, 2038
Fnu4HI GCNGC 9 cut(s) 378, 934, 1139, 1171, 1231, 1344, 1793, 1811, 2069
FokI GGATG 8 cut(s) 89, 454, 559, 1746, 1877, 1929, 2006, 2153
FriOI GRGCYC 4 cut(s) 387, 804, 1128, 1498
Fsp4HI GCNGC 9 cut(s) 378, 934, 1139, 1171, 1231, 1344, 1793, 1811, 2069
FspBI CTAG 3 cut(s) 110, 351, 1913
FspI TGCGCA 2 cut(s) 298, 1908
GlaI GCGC 5 cut(s) 87, 298, 993, 1541, 1908
GluI GCNGC 9 cut(s) 378, 934, 1139, 1171, 1231, 1344, 1793, 1811, 2069
GsuI CTGGAG 1 cut(s) 675
HaeIII GGCC 7 cut(s) 34, 251, 402, 796, 1659, 2071, 2225
HapII CCGG 5 cut(s) 35, 1492, 2072, 2091, 2159
HgaI GACGC 2 cut(s) 1130, 1370
HhaI GCGC 5 cut(s) 88, 299, 994, 1542, 1909
Hin6I GCGC 5 cut(s) 86, 297, 992, 1540, 1907
HinP1I GCGC 5 cut(s) 86, 297, 992, 1540, 1907
HincII GTYRAC 2 cut(s) 431, 447
HindII GTYRAC 2 cut(s) 431, 447
HindIII AAGCTT 1 cut(s) 1936
HpaII CCGG 5 cut(s) 35, 1492, 2072, 2091, 2159
HphI GGTGA 2 cut(s) 672, 1382
Hpy166II GTNNAC 5 cut(s) 431, 447, 1652, 2039, 2052
Hpy188I TCNGA 8 cut(s) 73, 461, 847, 906, 1474, 1620, 1763, 2194
Hpy8I GTNNAC 5 cut(s) 431, 447, 1652, 2039, 2052
HpyAV CCTTC 5 cut(s) 714, 1244, 1430, 1688, 1712
HpyCH4III ACNGT 5 cut(s) 17, 192, 247, 619, 665
HpyCH4IV ACGT 3 cut(s) 224, 867, 2059
HpyF10VI GCNNNNNNNGC 8 cut(s) 31, 408, 1022, 1031, 1094, 1387, 1734, 2081
HpyF3I CTNAG 8 cut(s) 704, 798, 844, 1122, 1134, 1578, 1617, 1788
HpySE526I ACGT 3 cut(s) 224, 867, 2059
HspAI GCGC 5 cut(s) 86, 297, 992, 1540, 1907
KroI GCCGGC 2 cut(s) 34, 2071
KroNI GCCGGC 2 cut(s) 36, 2073
Ksp22I TGATCA 2 cut(s) 639, 901
Kzo9I GATC 7 cut(s) 117, 639, 901, 965, 969, 1207, 1562
LmnI GCTCC 4 cut(s) 979, 1167, 1440, 1501
Lsp1109I GCAGC 8 cut(s) 364, 920, 1150, 1182, 1242, 1330, 1779, 1797
LweI GCATC 6 cut(s) 537, 825, 1316, 1452, 1724, 2215
MaeI CTAG 3 cut(s) 110, 351, 1913
MaeII ACGT 3 cut(s) 224, 867, 2059
MaeIII GTNAC 4 cut(s) 925, 1327, 1888, 1924
MalI GATC 7 cut(s) 119, 641, 903, 967, 971, 1209, 1564
MbiI CCGCTC 1 cut(s) 2068
MboI GATC 7 cut(s) 117, 639, 901, 965, 969, 1207, 1562
MboII GAAGA 6 cut(s) 379, 542, 623, 957, 1095, 1235
MflI RGATCY 2 cut(s) 1207, 1562
MhlI GDGCHC 7 cut(s) 387, 759, 804, 1036, 1128, 1498, 1977
MlsI TGGCCA 1 cut(s) 251
MluI ACGCGT 1 cut(s) 554
MluNI TGGCCA 1 cut(s) 251
MlyI GAGTC 6 cut(s) 196, 957, 1793, 1893, 1958, 2220
Mox20I TGGCCA 1 cut(s) 251
Mph1103I ATGCAT 2 cut(s) 237, 1086
MroNI GCCGGC 2 cut(s) 34, 2071
MscI TGGCCA 1 cut(s) 251
MseI TTAA 8 cut(s) 278, 345, 489, 786, 1163, 1257, 1296, 1940
MslI CAYNNNNRTG 4 cut(s) 154, 257, 870, 1994
Msp20I TGGCCA 1 cut(s) 251
MspA1I CMGCKG 1 cut(s) 1931
MspI CCGG 5 cut(s) 35, 1492, 2072, 2091, 2159
MspR9I CCNGG 6 cut(s) 732, 1006, 1493, 1661, 1842, 2007
Mva1269I GAATGC 2 cut(s) 235, 1420
MvaI CCWGG 5 cut(s) 732, 1006, 1661, 1842, 2007
MvnI CGCG 2 cut(s) 556, 1542
MwoI GCNNNNNNNGC 8 cut(s) 31, 408, 1022, 1031, 1094, 1387, 1734, 2081
NaeI GCCGGC 2 cut(s) 36, 2073
NciI CCSGG 1 cut(s) 1493
NdeII GATC 7 cut(s) 117, 639, 901, 965, 969, 1207, 1562
NgoMIV GCCGGC 2 cut(s) 34, 2071
NlaIV GGNNCC 3 cut(s) 161, 1497, 1804
NmuCI GTSAC 2 cut(s) 925, 1888
NsbI TGCGCA 2 cut(s) 298, 1908
NsiI ATGCAT 2 cut(s) 237, 1086
NspI RCATGY 7 cut(s) 12, 235, 437, 933, 1088, 1961, 2005
NspV TTCGAA 1 cut(s) 1778
PaeI GCATGC 4 cut(s) 12, 235, 1088, 2005
PagI TCATGA 2 cut(s) 871, 2062
PciI ACATGT 1 cut(s) 433
PctI GAATGC 2 cut(s) 235, 1420
PdiI GCCGGC 2 cut(s) 36, 2073
PfeI GAWTC 5 cut(s) 601, 1475, 1556, 1569, 2010
PinAI ACCGGT 1 cut(s) 2158
PkrI GCNGC 9 cut(s) 379, 935, 1140, 1172, 1232, 1345, 1794, 1812, 2070
PleI GAGTC 6 cut(s) 196, 956, 1792, 1893, 1957, 2219
PpsI GAGTC 6 cut(s) 196, 956, 1792, 1893, 1957, 2219
PpuMI RGGWCCY 1 cut(s) 160
PscI ACATGT 1 cut(s) 433
PshBI ATTAAT 1 cut(s) 786
Psp124BI GAGCTC 3 cut(s) 387, 804, 1128
Psp5II RGGWCCY 1 cut(s) 160
Psp6I CCWGG 5 cut(s) 730, 1004, 1659, 1840, 2005
PspGI CCWGG 5 cut(s) 730, 1004, 1659, 1840, 2005
PspN4I GGNNCC 3 cut(s) 161, 1497, 1804
PspPI GGNCC 3 cut(s) 160, 400, 1802
PspPPI RGGWCCY 1 cut(s) 160
PstI CTGCAG 3 cut(s) 286, 382, 1348
PstNI CAGNNNCTG 1 cut(s) 1565
PsuI RGATCY 2 cut(s) 1207, 1562
PvuII CAGCTG 1 cut(s) 1931
RsaI GTAC 6 cut(s) 65, 168, 189, 318, 559, 621
RsaNI GTAC 6 cut(s) 64, 167, 188, 317, 558, 620
RseI CAYNNNNRTG 4 cut(s) 154, 257, 870, 1994
SacI GAGCTC 3 cut(s) 387, 804, 1128
SalI GTCGAC 1 cut(s) 429
SaqAI TTAA 8 cut(s) 278, 345, 489, 786, 1163, 1257, 1296, 1940
SatI GCNGC 9 cut(s) 378, 934, 1139, 1171, 1231, 1344, 1793, 1811, 2069
Sau3AI GATC 7 cut(s) 117, 639, 901, 965, 969, 1207, 1562
Sau96I GGNCC 3 cut(s) 160, 400, 1802
SchI GAGTC 6 cut(s) 196, 957, 1793, 1893, 1958, 2220
ScrFI CCNGG 6 cut(s) 732, 1006, 1493, 1661, 1842, 2007
SduI GDGCHC 7 cut(s) 387, 759, 804, 1036, 1128, 1498, 1977
SfaNI GCATC 6 cut(s) 537, 825, 1316, 1452, 1724, 2215
SfcI CTRYAG 4 cut(s) 282, 378, 1112, 1344
SfuI TTCGAA 1 cut(s) 1778
SinI GGWCC 2 cut(s) 160, 1802
SmiMI CAYNNNNRTG 4 cut(s) 154, 257, 870, 1994
SphI GCATGC 4 cut(s) 12, 235, 1088, 2005
SsiI CCGC 5 cut(s) 138, 409, 915, 1016, 2068
SspI AATATT 2 cut(s) 940, 2199
SspMI CTAG 3 cut(s) 110, 351, 1913
SstI GAGCTC 3 cut(s) 387, 804, 1128
StyD4I CCNGG 6 cut(s) 730, 1004, 1491, 1659, 1840, 2005
StyI CCWWGG 1 cut(s) 1912
TaaI ACNGT 5 cut(s) 17, 192, 247, 619, 665
TaiI ACGT 3 cut(s) 227, 870, 2062
TatI WGTACW 3 cut(s) 63, 187, 316
TauI GCSGC 1 cut(s) 2071
TfiI GAWTC 5 cut(s) 601, 1475, 1556, 1569, 2010
Tru1I TTAA 8 cut(s) 278, 345, 489, 786, 1163, 1257, 1296, 1940
Tru9I TTAA 8 cut(s) 278, 345, 489, 786, 1163, 1257, 1296, 1940
TscAI CASTG 6 cut(s) 147, 291, 699, 866, 1518, 1893
TseFI GTSAC 2 cut(s) 925, 1888
TseI GCWGC 8 cut(s) 377, 933, 1138, 1170, 1230, 1343, 1792, 1810
Tsp45I GTSAC 2 cut(s) 925, 1888
TspGWI ACGGA 3 cut(s) 581, 1258, 2024
TspRI CASTG 6 cut(s) 147, 291, 699, 866, 1518, 1893
VpaK11BI GGWCC 2 cut(s) 160, 1802
VspI ATTAAT 1 cut(s) 786
XagI CCTNNNNNAGG 1 cut(s) 2219
XapI RAATTY 3 cut(s) 685, 1604, 1636
XceI RCATGY 7 cut(s) 12, 235, 437, 933, 1088, 1961, 2005
XmaJI CCTAGG 1 cut(s) 1912
XmiI GTMKAC 2 cut(s) 430, 2038
XspI CTAG 3 cut(s) 110, 351, 1913
Zsp2I ATGCAT 2 cut(s) 237, 1086
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.