Rh2DG280700

May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0003094
Physical Location & Seq
Reverse (-)
31781809 .. 31786377
4569 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG280700.1

Sequence Viewer

Length: 2226 bp
ATGGAGGCCTGCAACTGTATTGAGCCGCAGTGGCCGGCTGATGAGCTGCTGATGAAGTACCAGTACATTTCGGACTTCTTTATTGCACTTGCTTATTTCTCAATCCCTCTGGAGCTGATATACTTTGTCAAGAAATCCGCAGTGTTTCCATACAGATGGGTGCTTGTTCAGTTTGGTGCTTTCATCGTCTTGTGCGGCGCCACCCATCTTATTAACTTGTGGACTTTCAACATGCATTCTAGGACTGTGGCCCTAGTAATGACTACTGCCAAGGTTTTGACTGCTGTGGTTTCGTGCGCCACGGCGTTGATGCTTGTGCATATTATTCCTGATTTGTTGAGCGTTAAGACTAGGGAGTTGTTCTTGAAGAATAAGGCTGCAGAGCTTGATAGGGAAATGGGGCTGATTCGGACTCAGGAGGAAACCGGTCGACATGTCAGGATGCTGACACATGAGATCAGAAGTACTCTTGATAGACATACTATACTGAAAACCACACTTGTTGAGTTGGGTAGAACTTTGGCATTGGAAGAGTGTGCGTTGTGGATGCCCACGCGTACTGCGTTAGAGCTGCAACTGTCGTATACACTCCACCAGCAGAATCCGGTGGGACATACCGTACCCATTCATCTTCCTGTGATCAATCAAGTGTTTAGCAGCAACCATGCCGTGAAGATATCGCCGAATTCCCCAGTGGCAAGACTGAGGCCACTTGCGGGAAAGCATATGCCTGGAGAGGTTGTTGCTGTTCGTGTCCCTCTCCTGCATCTCTCAAACTTCCAAATCAATGACTGGCCTGAGCTCTCAACAAAACGCTATGCTTTGATGGTGTTGATGCTCCCTTCCGATAGTGCAAGGCAATGGCATATGCATGAGTTAGAGCTGGTTGAGGTAGTTGCTGACCAGGTAGCAGTTGCTCTATCACACGCTGCTATCTTAGAAGAGTCAAGGAGAGCTAGGGATCTGCTAATGGAGCAGAATATTGCACTTGATCTGGCTAGGAGGGAAGCAGAAACGGCAATTCGTGCTCGCAATGATTTCTTGGCTGTTATGAACCATGAGATGAGAACTCCCATGCATGCAATTATTGCTCTGTCTTCTTTGCTGCAGGAAACTGAGCTGACACCGGAGCAGCGCCTAATGGTTGAAACAATATTAAAGAGCAGTAACCTTTTGGCTACCCTCATAAATGATGTATTAGATCTTTCAAGACTTGAAGATGGCAGCCTTCAACTTGACATAGCAACTTTTAACCTCCATTCTGTATTTATAGAGGTTCATAATTTAATTAAGCCTATTGCATCTGTTAAAAAGTTGTCGGTTACATTAAATTTAGCAGCAGATCTGCCAGTGTATGCGATAGGTGATGAAAAGCGCCTTATGCAAACTATTCTAAATGTTGTTGGGAATGCTGTGAAGTTTTCAAAAGAAGGGAGCATCTGGATTACAGTTTTTGTTGCAAAATCAGAATCTTTAAGAGATTTCCATGCTGCTGATTTTTTTCCTGTGCAAAGTGATAATCACTTTTATCTGCGTGTACAGGTAAAAGATTCAGGATCTGGAATCAATCCCCAGGATCTTCCAAAGCTATTCACCAAATTTGCACAGAATCAGCCATTAGCTACTAGAAATTCTGGTGGTAGTGGACTTGGTTTGGCTATCTGTAAGAGATTTGTAAATCTTATGGAGGGGCATATTTGGATTGAAAGTGAAGGTCTCGGCAAGGGATGCACTGCCAATTTCATTGTGAAACTTGGCTATCTGGAGCGATCAAATGAGTCTAAGCTGCCTTTTCTGCCTAAGATGCGAGCAACTCATGTTCAAACAAACTTTCCAGGGTTGAAAGTTCTTGTCATGGATGATAATGGAGTCAGCAGATCAGTGACAAAGGGACTCCTTGAGCACCTGGGATGTGATGTGACAACCGTAAGCTCAACTGATGAGTTCTTGCAAGTTATTTCACAGGAGCACAAGGTGGTGTTCATGGATGTGTGCATGCCTGGCATAGATGGGTATGAACTAGCTGTCCAGATTCATGAAAAGTTTACAAAACGTCATGAACGACCAGTATTAGTTGCACTTACTGGAAACATAAACAAGATGACAAAGGAGAGCTGCATGAGGGTTGGTATGGACGGAGTTATACTAAAACCTGTTTCAGTTGATAAAATGAGAAGTGTTTTATCTGAACTACTAGAGCATCGGGTTCTATTTGAGGCAATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000160 GO:0001101 GO:0002237 GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009308 GO:0009408 GO:0009593 GO:0009605 GO:0009607 GO:0009617 GO:0009625 GO:0009628 GO:0009651 GO:0009690 GO:0009719 GO:0009720 GO:0009723 GO:0009725 GO:0009726 GO:0009727 GO:0009733 GO:0009737 GO:0009739 GO:0009743 GO:0009755 GO:0009756 GO:0009873 GO:0009888 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010087 GO:0010104 GO:0010105 GO:0010119 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0016999 GO:0017000 GO:0017144 GO:0018106 GO:0018193 GO:0018202 GO:0019538 GO:0023051 GO:0023052 GO:0023057 GO:0032502 GO:0032870 GO:0033036 GO:0033037 GO:0033554 GO:0033993 GO:0034754 GO:0035556 GO:0036211 GO:0038023 GO:0038199 GO:0042221 GO:0042445 GO:0042545 GO:0042562 GO:0042742 GO:0042743 GO:0042802 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0046483 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048856 GO:0050665 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051239 GO:0051301 GO:0051606 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0051740 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0060089 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070727 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071369 GO:0071495 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0072328 GO:0072593 GO:0097305 GO:0098542 GO:0140096 GO:1900140 GO:1901564 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:1903409 GO:2000026
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
GAF HATPase_c HisKA Response_reg

Protein Analysis

741

Amino Acids

83.25

Weight (kDa)

6.74

Isoelectric Point (pI)

46.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ETR1_N PF25487 17 - 115 6.8e-40 Ethylene receptor 1-like, N-terminal domain
GAF PF01590 158 - 307 1.1e-11 GAF domain
HisKA PF00512 343 - 408 3.2e-19 His Kinase A (phospho-acceptor) domain
HATPase_c PF02518 455 - 585 4.7e-25 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response_reg PF00072 616 - 727 2.3e-18 Response regulator receiver domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 197
AccI GTMKAC 2 cut(s) 430, 584
AccII CGCG 1 cut(s) 556
AciI CCGC 4 cut(s) 26, 138, 195, 716
AclWI GGATC 3 cut(s) 969, 1564, 1584
AcoI YGGCCR 1 cut(s) 32
AcsI RAATTY 4 cut(s) 685, 1330, 1598, 1630
AcyI GRCGYC 1 cut(s) 198
AdeI CACNNNGTG 1 cut(s) 1975
AfaI GTAC 6 cut(s) 59, 65, 466, 559, 621, 1539
AfiI CCNNNNNNNGG 1 cut(s) 716
AflIII ACRYGT 2 cut(s) 433, 554
AgeI ACCGGT 1 cut(s) 425
AjnI CCWGG 6 cut(s) 730, 903, 1572, 1834, 1905, 1999
AloI GAACNNNNNNTCC 2 cut(s) 2010, 2042
Alw21I GWGCWC 4 cut(s) 804, 1030, 1905, 1971
Alw26I GTCTC 1 cut(s) 1721
AlwI GGATC 3 cut(s) 969, 1564, 1584
AlwNI CAGNNNCTG 1 cut(s) 1559
AoxI GGCC 5 cut(s) 6, 32, 249, 707, 794
ApoI RAATTY 4 cut(s) 685, 1330, 1598, 1630
AsiGI ACCGGT 1 cut(s) 425
AspLEI GCGC 4 cut(s) 200, 299, 1137, 1377
AspS9I GGNCC 1 cut(s) 250
AsuHPI GGTGA 2 cut(s) 1376, 1585
BanI GGYRCC 1 cut(s) 197
BanII GRGCYC 1 cut(s) 804
BarI GAAGNNNNNNTAC 2 cut(s) 47, 79
BbsI GAAGAC 1 cut(s) 1089
Bbv12I GWGCWC 4 cut(s) 804, 1030, 1905, 1971
BccI CCATC 5 cut(s) 150, 213, 820, 1214, 2003
BceAI ACGGC 3 cut(s) 318, 653, 1032
BciT130I CCWGG 6 cut(s) 732, 905, 1574, 1836, 1907, 2001
BclI TGATCA 1 cut(s) 639
BcoDI GTCTC 1 cut(s) 1721
BfaI CTAG 8 cut(s) 240, 254, 351, 957, 999, 1626, 2021, 2195
BfmI CTRYAG 2 cut(s) 378, 1106
BfoI RGCGCY 3 cut(s) 201, 1138, 1378
BglI GCCNNNNNGGC 1 cut(s) 31
BglII AGATCT 2 cut(s) 1201, 1342
BmcAI AGTACT 1 cut(s) 466
Bme1390I CCNGG 6 cut(s) 732, 905, 1574, 1836, 1907, 2001
BmgT120I GGNCC 1 cut(s) 250
BmiI GGNNCC 1 cut(s) 199
BmrFI CCNGG 6 cut(s) 732, 905, 1574, 1836, 1907, 2001
BmrI ACTGGG 1 cut(s) 686
BmuI ACTGGG 1 cut(s) 686
BpiI GAAGAC 1 cut(s) 1089
BpmI CTGGAG 3 cut(s) 131, 753, 1784
Bpu10I CCTNAGC 1 cut(s) 798
BpuEI CTTGAG 1 cut(s) 1919
BsaHI GRCGYC 1 cut(s) 198
BsaI GGTCTC 1 cut(s) 1721
BsaJI CCNNGG 5 cut(s) 270, 300, 1572, 1835, 1906
BsaWI WCCGGW 3 cut(s) 425, 604, 1126
BsaXI ACNNNNNCTCC 2 cut(s) 726, 756
Bsc4I CCNNNNNNNGG 1 cut(s) 716
Bse118I RCCGGY 2 cut(s) 34, 425
Bse1I ACTGG 6 cut(s) 61, 692, 797, 1349, 2066, 2089
Bse3DI GCAATG 3 cut(s) 866, 1039, 2226
BseBI CCWGG 6 cut(s) 732, 905, 1574, 1836, 1907, 2001
BseDI CCNNGG 5 cut(s) 270, 300, 1572, 1835, 1906
BseGI GGATG 6 cut(s) 447, 552, 1733, 1864, 1916, 1993
BseLI CCNNNNNNNGG 1 cut(s) 716
BseMI GCAATG 3 cut(s) 866, 1039, 2226
BseMII CTCAG 4 cut(s) 428, 695, 789, 1107
BseNI ACTGG 6 cut(s) 61, 692, 797, 1349, 2066, 2089
Bsh1236I CGCG 1 cut(s) 556
Bsh1285I CGRYCG 1 cut(s) 430
BshFI GGCC 5 cut(s) 8, 34, 251, 709, 796
BshNI GGYRCC 1 cut(s) 197
BshTI ACCGGT 1 cut(s) 425
BsiEI CGRYCG 1 cut(s) 430
BsiHKAI GWGCWC 4 cut(s) 804, 1030, 1905, 1971
BsiSI CCGG 4 cut(s) 35, 426, 605, 1127
BslFI GGGAC 3 cut(s) 624, 740, 1905
BslI CCNNNNNNNGG 1 cut(s) 716
BsmAI GTCTC 1 cut(s) 1721
BsmFI GGGAC 3 cut(s) 624, 740, 1905
BsmI GAATGC 2 cut(s) 235, 1414
BsnI GGCC 5 cut(s) 8, 34, 251, 709, 796
Bso31I GGTCTC 1 cut(s) 1721
Bsp1286I GDGCHC 4 cut(s) 804, 1030, 1905, 1971
Bsp1407I TGTACA 1 cut(s) 1537
BspACI CCGC 4 cut(s) 26, 138, 195, 716
BspANI GGCC 5 cut(s) 8, 34, 251, 709, 796
BspCNI CTCAG 4 cut(s) 427, 696, 790, 1108
BspFNI CGCG 1 cut(s) 556
BspHI TCATGA 2 cut(s) 2035, 2056
BspLI GGNNCC 1 cut(s) 199
BspMAI CTGCAG 2 cut(s) 382, 1110
BspPI GGATC 3 cut(s) 969, 1564, 1584
BspT107I GGYRCC 1 cut(s) 197
BspTNI GGTCTC 1 cut(s) 1721
BsrDI GCAATG 3 cut(s) 866, 1039, 2226
BsrFI RCCGGY 2 cut(s) 34, 425
BsrGI TGTACA 1 cut(s) 1537
BsrI ACTGG 6 cut(s) 61, 692, 797, 1349, 2066, 2089
BssAI RCCGGY 2 cut(s) 34, 425
BssECI CCNNGG 5 cut(s) 270, 300, 1572, 1835, 1906
BssNAI GTATAC 1 cut(s) 585
BssNI GRCGYC 1 cut(s) 198
BssT1I CCWWGG 1 cut(s) 270
Bst1107I GTATAC 1 cut(s) 585
Bst2UI CCWGG 6 cut(s) 732, 905, 1574, 1836, 1907, 2001
Bst4CI ACNGT 6 cut(s) 17, 247, 579, 619, 1450, 1927
Bst6I CTCTTC 2 cut(s) 525, 936
BstACI GRCGYC 1 cut(s) 198
BstAPI GCANNNNNTGC 3 cut(s) 1025, 1088, 1728
BstAUI TGTACA 1 cut(s) 1537
BstC8I GCNNGC 6 cut(s) 10, 36, 1030, 1080, 1809, 1997
BstDEI CTNAG 7 cut(s) 414, 704, 798, 937, 1116, 1782, 1800
BstDSI CCRYGG 1 cut(s) 300
BstF5I GGATG 6 cut(s) 447, 552, 1733, 1864, 1916, 1993
BstFNI CGCG 1 cut(s) 556
BstH2I RGCGCY 3 cut(s) 201, 1138, 1378
BstHHI GCGC 4 cut(s) 200, 299, 1137, 1377
BstMAI GTCTC 1 cut(s) 1721
BstMCI CGRYCG 1 cut(s) 430
BstNI CCWGG 6 cut(s) 732, 905, 1574, 1836, 1907, 2001
BstNSI RCATGY 4 cut(s) 235, 437, 1082, 1999
BstSCI CCNGG 6 cut(s) 730, 903, 1572, 1834, 1905, 1999
BstSFI CTRYAG 2 cut(s) 378, 1106
BstUI CGCG 1 cut(s) 556
BstV2I GAAGAC 1 cut(s) 1089
BstX2I RGATCY 5 cut(s) 961, 1201, 1342, 1556, 1576
BstXI CCANNNNNNTGG 1 cut(s) 156
BstYI RGATCY 5 cut(s) 961, 1201, 1342, 1556, 1576
BstZ17I GTATAC 1 cut(s) 585
BsuRI GGCC 5 cut(s) 8, 34, 251, 709, 796
BtgI CCRYGG 1 cut(s) 300
BtsCI GGATG 6 cut(s) 447, 552, 1733, 1864, 1916, 1993
BtsI GCAGTG 3 cut(s) 35, 147, 1731
BtsIMutI CAGTG 6 cut(s) 35, 147, 699, 1356, 1731, 1887
Cac8I GCNNGC 6 cut(s) 10, 36, 1030, 1080, 1809, 1997
CaiI CAGNNNCTG 1 cut(s) 1559
CciI TCATGA 2 cut(s) 2035, 2056
CfoI GCGC 4 cut(s) 200, 299, 1137, 1377
Cfr10I RCCGGY 2 cut(s) 34, 425
Cfr13I GGNCC 1 cut(s) 250
CsiI ACCWGGT 1 cut(s) 903
Csp6I GTAC 6 cut(s) 58, 64, 465, 558, 620, 1538
CspAI ACCGGT 1 cut(s) 425
CspCI CAANNNNNGTGG 2 cut(s) 484, 519
CviQI GTAC 6 cut(s) 58, 64, 465, 558, 620, 1538
DdeI CTNAG 7 cut(s) 414, 704, 798, 937, 1116, 1782, 1800
DinI GGCGCC 1 cut(s) 199
DraIII CACNNNGTG 1 cut(s) 1975
EaeI YGGCCR 1 cut(s) 32
Eam1104I CTCTTC 2 cut(s) 525, 936
EarI CTCTTC 2 cut(s) 525, 936
Ecl136II GAGCTC 1 cut(s) 802
Eco130I CCWWGG 1 cut(s) 270
Eco147I AGGCCT 1 cut(s) 8
Eco24I GRGCYC 1 cut(s) 804
Eco31I GGTCTC 1 cut(s) 1721
Eco32I GATATC 1 cut(s) 678
Eco53kI GAGCTC 1 cut(s) 802
EcoICRI GAGCTC 1 cut(s) 802
EcoRI GAATTC 1 cut(s) 685
EcoRII CCWGG 6 cut(s) 730, 903, 1572, 1834, 1905, 1999
EcoRV GATATC 1 cut(s) 678
EcoT14I CCWWGG 1 cut(s) 270
EcoT22I ATGCAT 3 cut(s) 237, 873, 1080
EcoT38I GRGCYC 1 cut(s) 804
EgeI GGCGCC 1 cut(s) 199
EheI GGCGCC 1 cut(s) 199
ErhI CCWWGG 1 cut(s) 270
FaqI GGGAC 3 cut(s) 624, 740, 1905
FauI CCCGC 1 cut(s) 709
FauNDI CATATG 2 cut(s) 726, 867
FbaI TGATCA 1 cut(s) 639
FblI GTMKAC 2 cut(s) 430, 584
FokI GGATG 6 cut(s) 454, 559, 1740, 1871, 1923, 2000
FriOI GRGCYC 1 cut(s) 804
FspBI CTAG 8 cut(s) 240, 254, 351, 957, 999, 1626, 2021, 2195
GlaI GCGC 4 cut(s) 199, 298, 1136, 1376
GsuI CTGGAG 3 cut(s) 131, 753, 1784
HaeII RGCGCY 3 cut(s) 201, 1138, 1378
HaeIII GGCC 5 cut(s) 8, 34, 251, 709, 796
HapII CCGG 4 cut(s) 35, 426, 605, 1127
HhaI GCGC 4 cut(s) 200, 299, 1137, 1377
Hin1I GRCGYC 1 cut(s) 198
Hin6I GCGC 4 cut(s) 198, 297, 1135, 1375
HinP1I GCGC 4 cut(s) 198, 297, 1135, 1375
HincII GTYRAC 1 cut(s) 431
HindII GTYRAC 1 cut(s) 431
HpaII CCGG 4 cut(s) 35, 426, 605, 1127
HphI GGTGA 2 cut(s) 1376, 1585
Hpy166II GTNNAC 6 cut(s) 222, 431, 585, 1538, 1646, 2046
Hpy188I TCNGA 6 cut(s) 73, 411, 461, 847, 1468, 2188
Hpy8I GTNNAC 6 cut(s) 222, 431, 585, 1538, 1646, 2046
HpyAV CCTTC 4 cut(s) 852, 1238, 1424, 1706
HpyCH4III ACNGT 6 cut(s) 17, 247, 579, 619, 1450, 1927
HpyCH4IV ACGT 1 cut(s) 2053
HpyF3I CTNAG 7 cut(s) 414, 704, 798, 937, 1116, 1782, 1800
HpySE526I ACGT 1 cut(s) 2053
Hsp92I GRCGYC 1 cut(s) 198
HspAI GCGC 4 cut(s) 198, 297, 1135, 1375
KasI GGCGCC 1 cut(s) 197
KroI GCCGGC 1 cut(s) 34
KroNI GCCGGC 1 cut(s) 36
Ksp22I TGATCA 1 cut(s) 639
LmnI GCTCC 7 cut(s) 112, 843, 973, 1129, 1434, 1765, 1966
MabI ACCWGGT 1 cut(s) 903
MaeI CTAG 8 cut(s) 240, 254, 351, 957, 999, 1626, 2021, 2195
MaeII ACGT 1 cut(s) 2053
MaeIII GTNAC 4 cut(s) 1166, 1321, 1882, 1918
MboII GAAGA 8 cut(s) 379, 542, 623, 685, 953, 1089, 1229, 1571
MflI RGATCY 5 cut(s) 961, 1201, 1342, 1556, 1576
MhlI GDGCHC 4 cut(s) 804, 1030, 1905, 1971
MluCI AATT 9 cut(s) 685, 1020, 1083, 1282, 1287, 1330, 1598, 1630, 1738
MluI ACGCGT 1 cut(s) 554
Mly113I GGCGCC 1 cut(s) 198
MlyI GAGTC 5 cut(s) 406, 953, 1787, 1878, 1887
Mph1103I ATGCAT 3 cut(s) 237, 873, 1080
MroNI GCCGGC 1 cut(s) 34
MseI TTAA 9 cut(s) 213, 345, 1157, 1251, 1286, 1290, 1308, 1328, 1475
MslI CAYNNNNRTG 3 cut(s) 154, 870, 1988
MspI CCGG 4 cut(s) 35, 426, 605, 1127
MspR9I CCNGG 6 cut(s) 732, 905, 1574, 1836, 1907, 2001
Mva1269I GAATGC 2 cut(s) 235, 1414
MvaI CCWGG 6 cut(s) 732, 905, 1574, 1836, 1907, 2001
MvnI CGCG 1 cut(s) 556
NaeI GCCGGC 1 cut(s) 36
NarI GGCGCC 1 cut(s) 198
NdeI CATATG 2 cut(s) 726, 867
NgoMIV GCCGGC 1 cut(s) 34
NlaIV GGNNCC 1 cut(s) 199
NmeAIII GCCGAG 1 cut(s) 1698
NmuCI GTSAC 2 cut(s) 1882, 1918
NsiI ATGCAT 3 cut(s) 237, 873, 1080
NspI RCATGY 4 cut(s) 235, 437, 1082, 1999
PacI TTAATTAA 1 cut(s) 1290
PaeI GCATGC 2 cut(s) 1082, 1999
PagI TCATGA 2 cut(s) 2035, 2056
PceI AGGCCT 1 cut(s) 8
PciI ACATGT 1 cut(s) 433
PcsI WCGNNNNNNNCGW 2 cut(s) 560, 2059
PctI GAATGC 2 cut(s) 235, 1414
PdiI GCCGGC 1 cut(s) 36
PfeI GAWTC 7 cut(s) 406, 601, 1469, 1550, 1563, 1609, 2032
PinAI ACCGGT 1 cut(s) 425
PleI GAGTC 5 cut(s) 406, 952, 1786, 1877, 1887
PluTI GGCGCC 1 cut(s) 201
PpsI GAGTC 5 cut(s) 406, 952, 1786, 1877, 1887
PscI ACATGT 1 cut(s) 433
Psp124BI GAGCTC 1 cut(s) 804
Psp6I CCWGG 6 cut(s) 730, 903, 1572, 1834, 1905, 1999
PspGI CCWGG 6 cut(s) 730, 903, 1572, 1834, 1905, 1999
PspN4I GGNNCC 1 cut(s) 199
PspPI GGNCC 1 cut(s) 250
PstI CTGCAG 2 cut(s) 382, 1110
PstNI CAGNNNCTG 1 cut(s) 1559
PsuI RGATCY 5 cut(s) 961, 1201, 1342, 1556, 1576
RsaI GTAC 6 cut(s) 59, 65, 466, 559, 621, 1539
RsaNI GTAC 6 cut(s) 58, 64, 465, 558, 620, 1538
RseI CAYNNNNRTG 3 cut(s) 154, 870, 1988
SacI GAGCTC 1 cut(s) 804
SalI GTCGAC 1 cut(s) 429
SaqAI TTAA 9 cut(s) 213, 345, 1157, 1251, 1286, 1290, 1308, 1328, 1475
Sau96I GGNCC 1 cut(s) 250
ScaI AGTACT 1 cut(s) 466
SchI GAGTC 5 cut(s) 406, 953, 1787, 1878, 1887
ScrFI CCNGG 6 cut(s) 732, 905, 1574, 1836, 1907, 2001
SduI GDGCHC 4 cut(s) 804, 1030, 1905, 1971
SexAI ACCWGGT 1 cut(s) 903
SfcI CTRYAG 2 cut(s) 378, 1106
SfoI GGCGCC 1 cut(s) 199
SmiMI CAYNNNNRTG 3 cut(s) 154, 870, 1988
SmlI CTYRAG 1 cut(s) 1898
SmoI CTYRAG 1 cut(s) 1898
SphI GCATGC 2 cut(s) 1082, 1999
Sse9I AATT 9 cut(s) 685, 1020, 1083, 1282, 1287, 1330, 1598, 1630, 1738
SseBI AGGCCT 1 cut(s) 8
SsiI CCGC 4 cut(s) 26, 138, 195, 716
SspDI GGCGCC 1 cut(s) 197
SspI AATATT 2 cut(s) 982, 1155
SspMI CTAG 8 cut(s) 240, 254, 351, 957, 999, 1626, 2021, 2195
SstI GAGCTC 1 cut(s) 804
StuI AGGCCT 1 cut(s) 8
StyD4I CCNGG 6 cut(s) 730, 903, 1572, 1834, 1905, 1999
StyI CCWWGG 1 cut(s) 270
TaaI ACNGT 6 cut(s) 17, 247, 579, 619, 1450, 1927
TaiI ACGT 1 cut(s) 2056
TaqI TCGA 1 cut(s) 430
TasI AATT 9 cut(s) 685, 1020, 1083, 1282, 1287, 1330, 1598, 1630, 1738
TatI WGTACW 3 cut(s) 63, 464, 1537
TauI GCSGC 2 cut(s) 28, 198
TfiI GAWTC 7 cut(s) 406, 601, 1469, 1550, 1563, 1609, 2032
Tru1I TTAA 9 cut(s) 213, 345, 1157, 1251, 1286, 1290, 1308, 1328, 1475
Tru9I TTAA 9 cut(s) 213, 345, 1157, 1251, 1286, 1290, 1308, 1328, 1475
TscAI CASTG 6 cut(s) 35, 147, 699, 1356, 1738, 1887
TseFI GTSAC 2 cut(s) 1882, 1918
Tsp45I GTSAC 2 cut(s) 1882, 1918
TspGWI ACGGA 1 cut(s) 2151
TspRI CASTG 6 cut(s) 35, 147, 699, 1356, 1738, 1887
XapI RAATTY 4 cut(s) 685, 1330, 1598, 1630
XceI RCATGY 4 cut(s) 235, 437, 1082, 1999
XmiI GTMKAC 2 cut(s) 430, 584
XspI CTAG 8 cut(s) 240, 254, 351, 957, 999, 1626, 2021, 2195
ZrmI AGTACT 1 cut(s) 466
Zsp2I ATGCAT 3 cut(s) 237, 873, 1080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.