Prupe.1G556000_v2.0.a1

May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0003094
Physical Location & Seq
Forward (+)
45414685 .. 45422620
7936 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G556000.3

Sequence Viewer

Length: 2226 bp
ATGGAAGCATGCAATTGTATTGAGCCACAATGGCCAGCTGATGAATTGCTGATGAAGTATCAGTACATCTCGGATTTCTTTATTGCACTTGCTTATTTCTCCATCCCCCTGGAGTTGATCTACTTTGTCAAGAAATCTGCAGTGTTTCCATACAGATGGGTCCTTGTTCAGTTTGGTGCTTTCATTGTATTGTGCGGAGCTACGCATCTTATCAACTTATGGACTTTTAGCATGCATTCAAGAACTGTGGCCATAGTAATGACCACTGCAAAGGTTTTAACTGCTGTGGTGTCATGTGCAACTGCCCTCATGCTTGTACATATTATTCCTGATTTATTGAGTGTTAAAACTAGGGAACTATTCTTGAAGAACAAGGCTGCAGAGCTCGATAGAGAAATGGGTCTTATTCGTACACAAGAGGAAACTGGTCGACATGTCAGGATGCTGACCCATGAGATCAGAAGCACTCTTGATAGGCATACTATACTGAAAACCACACTTGTCGAATTAGGTAGAACTTTGGCATTGGAAGAGTGTGCCTTGTGGATGCCGACACGTACTGGCTTAGAGCTTCAACTATCCTATACACTACGTCAGCAGAATCCAGTAGGATATACTGTACCCATTCATCTTCCTGTGATCAATCAAGTATTTAGTAGCAACCGCGCATTAAAAATATCTCCTAATTCTCCAGTGGCAAGAATGAGGCCACTTGCAGGAAAGCACATGCCAGGGGAGGTTGTTGCTGTTCGTGTCCCGCTCCTCCATCTCTCTAACTTCCAAATTAATGACTGGCCAGAGCTGTCAACGAAACGCTATGCTTTGATGGTCTTGATGCTTCCCTCTGATAGTGCAAGGCAATGGCATGTCCATGAGTTGGAACTGGTTGAAGTAGTTGCTGATCAGGTGGCAGTTGCTCTGTCACATGCTGCAATATTAGAAGAGTCAATGAGGGCAAGGGATCTCCTTATGGAGCAAAATATTGCACTTGATCTGGCCAGGAGGGAAGCGGAAACTGCAATTCGTGCTCGCAATGATTTCTTGGCTGTTATGAACCATGAGATGAGAACTCCCATGCATGCAATTATTGCCCTTTCTTCCTTGCTGCAGGAAACTGAGTTGACACCTGAGCAGCGCCTGATGGTGGAAACAATCTTAAAGAGTAGTCACCTTTTGGCTACCCTCATAAATGATGTATTGGATCTTTCAAGGCTTGAAGATGGCAGCCTTCAGCTTGAGATAGCAACTTTTAACCTCCACTCTGTATTCAGAGAGGTTCATAATTTGATTAAGCCTGTTGCATCTGTCAAAAAGCTATCGGTTTCATTAAATTTAGCCGCAGATTTGCCAGTGCAAGCCGTAGGTGACGAAAAGCGCCTCATGCAAATTGTTCTAAATGTTGTTGGGAATGCTGTTAAGTTCTCCAAAGAAGGGAGCATCTCAATCACAGCTTTTGTTGCAAAATCAGAATCCTTAAGAGATTTCCGTGCTCCTGAGTTTTTTCCGGCGCAAAGCGATAATCACTTTTATCTGCGTGTACAGGTAAAAGATTCAGGATCAGGAATAAATCCGCAGGATATTCCAAAGCTATTTACCAAATTTGCCCAAACTCAGTCATTAGCTACTCGAAATTCTGGTGGTAGTGGACTTGGCCTTGCAATTTGTAAGAGGTTTGTAAATCTTATGGAGGGGCATATTTGGATTGAAAGTGAAGGTCCTGGAAAGGGATGCACTGCCATTTTCATTGTGAAACTTGGATTTGCAGAGCGTTCAAATGAATCTAAGCTGCCTTTTGTGACTAAGGTGCAAGCAAATCATGTACAAACGAACTTTCCAGGGTTGAAAGTCCTTGTCATGGATGATAACGGGGTCAGCAGGTCAGTGACTAAGGGACTCCTTGTGCACCTGGGATGTGATGTAACAACTGTAAGCTCAATTGATGAGTTCTTGCACGTTATTTCTCAAGAGCACAAGGTGGTGTTTATGGATGTGTGCATGCCTGGAATTGATGGTTACGAACTTGCTGTCCGGATACATGAAAAGTTTACAAAACGTCATGAACGGCCAGTATTAGTAGCACTTACTGGAAATATAGACAAGATGACAAAGGAGAACTGCATGAGGGTTGGTATGGATGGAGTTATACTGAAACCTGTCTCAGTTGATAAAATGAGGAGTGTTTTATCAGAACTGTTGGAGCATCGAGTTTTATTTGAGGCTATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000160 GO:0001101 GO:0002237 GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009308 GO:0009408 GO:0009593 GO:0009605 GO:0009607 GO:0009617 GO:0009625 GO:0009628 GO:0009651 GO:0009690 GO:0009719 GO:0009720 GO:0009723 GO:0009725 GO:0009726 GO:0009727 GO:0009733 GO:0009737 GO:0009739 GO:0009743 GO:0009755 GO:0009756 GO:0009873 GO:0009888 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010087 GO:0010104 GO:0010105 GO:0010119 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0016999 GO:0017000 GO:0017144 GO:0018106 GO:0018193 GO:0018202 GO:0019538 GO:0023051 GO:0023052 GO:0023057 GO:0032502 GO:0032870 GO:0033036 GO:0033037 GO:0033554 GO:0033993 GO:0034754 GO:0035556 GO:0036211 GO:0038023 GO:0038199 GO:0042221 GO:0042445 GO:0042545 GO:0042562 GO:0042742 GO:0042743 GO:0042802 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0046483 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048856 GO:0050665 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051239 GO:0051301 GO:0051606 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0051740 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0060089 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070727 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071369 GO:0071495 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0072328 GO:0072593 GO:0097305 GO:0098542 GO:0140096 GO:1900140 GO:1901564 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:1903409 GO:2000026
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
GAF HATPase_c HisKA Response_reg

Protein Analysis

742

Amino Acids

83.04

Weight (kDa)

7.15

Isoelectric Point (pI)

42.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1866
AccB7I CCANNNNNTGG 1 cut(s) 877
AccBSI CCGCTC 1 cut(s) 760
AccI GTMKAC 1 cut(s) 430
AccII CGCG 1 cut(s) 666
AccIII TCCGGA 1 cut(s) 2028
AciI CCGC 6 cut(s) 195, 664, 758, 1010, 1338, 1571
AclWI GGATC 3 cut(s) 969, 1209, 1564
AcoI YGGCCR 5 cut(s) 32, 249, 794, 996, 2063
AcsI RAATTY 3 cut(s) 1330, 1598, 1630
AcuI CTGAAG 1 cut(s) 1214
AdeI CACNNNGTG 1 cut(s) 1975
AfaI GTAC 7 cut(s) 65, 318, 412, 559, 621, 1539, 1821
AfiI CCNNNNNNNGG 6 cut(s) 716, 877, 1144, 1431, 1724, 1855
AflII CTTAAG 1 cut(s) 1474
AflIII ACRYGT 2 cut(s) 433, 554
AgsI TTSAA 9 cut(s) 240, 367, 575, 890, 1209, 1217, 1706, 1773, 1843
AjnI CCWGG 7 cut(s) 108, 730, 998, 1717, 1834, 1905, 1999
AloI GAACNNNNNNTCC 2 cut(s) 2010, 2042
Alw21I GWGCWC 5 cut(s) 387, 1030, 1492, 1905, 1971
Alw26I GTCTC 1 cut(s) 2161
Alw44I GTGCAC 1 cut(s) 1901
AlwI GGATC 3 cut(s) 969, 1209, 1564
AlwNI CAGNNNCTG 1 cut(s) 1138
Aor13HI TCCGGA 1 cut(s) 2028
AoxI GGCC 7 cut(s) 32, 249, 707, 794, 996, 1651, 2063
ApaLI GTGCAC 1 cut(s) 1901
ApeKI GCWGC 6 cut(s) 377, 929, 1105, 1132, 1224, 1786
ApoI RAATTY 3 cut(s) 1330, 1598, 1630
ArsI GACNNNNNNTTYG 2 cut(s) 2010, 2042
AseI ATTAAT 1 cut(s) 786
AspLEI GCGC 4 cut(s) 668, 1137, 1377, 1510
AspS9I GGNCC 2 cut(s) 160, 1715
AsuHPI GGTGA 2 cut(s) 1160, 1376
AvaII GGWCC 2 cut(s) 160, 1715
BaeGI GKGCMC 1 cut(s) 1905
BalI TGGCCA 4 cut(s) 34, 251, 796, 998
BanII GRGCYC 1 cut(s) 387
BarI GAAGNNNNNNTAC 2 cut(s) 47, 79
Bbv12I GWGCWC 5 cut(s) 387, 1030, 1492, 1905, 1971
BbvI GCAGC 6 cut(s) 364, 916, 1092, 1144, 1236, 1773
BccI CCATC 8 cut(s) 110, 150, 774, 820, 1135, 1214, 2003, 2129
BceAI ACGGC 2 cut(s) 1343, 2078
BciT130I CCWGG 7 cut(s) 110, 732, 1000, 1719, 1836, 1907, 2001
BciVI GTATCC 1 cut(s) 2025
BclI TGATCA 2 cut(s) 639, 901
BcoDI GTCTC 1 cut(s) 2161
BfaI CTAG 1 cut(s) 351
BfmI CTRYAG 3 cut(s) 138, 378, 1106
BfoI RGCGCY 2 cut(s) 1138, 1378
BfrI CTTAAG 1 cut(s) 1474
BfuAI ACCTGC 1 cut(s) 1866
BfuI GTATCC 1 cut(s) 2025
BglI GCCNNNNNGGC 1 cut(s) 31
BisI GCNGC 7 cut(s) 378, 930, 1106, 1133, 1225, 1338, 1787
BlsI GCNGC 7 cut(s) 379, 931, 1107, 1134, 1226, 1339, 1788
Bme1390I CCNGG 7 cut(s) 110, 732, 1000, 1719, 1836, 1907, 2001
Bme18I GGWCC 2 cut(s) 160, 1715
BmgT120I GGNCC 2 cut(s) 160, 1715
BmiI GGNNCC 1 cut(s) 161
BmrFI CCNGG 7 cut(s) 110, 732, 1000, 1719, 1836, 1907, 2001
BmsI GCATC 8 cut(s) 214, 432, 537, 825, 1310, 1446, 1718, 2209
BpmI CTGGAG 2 cut(s) 131, 675
Bpu10I CCTNAGC 1 cut(s) 1128
BpuEI CTTGAG 2 cut(s) 1256, 1947
BsaAI YACGTR 1 cut(s) 557
BsaJI CCNNGG 4 cut(s) 108, 731, 1835, 1906
BsaWI WCCGGW 1 cut(s) 2028
Bsc4I CCNNNNNNNGG 6 cut(s) 716, 877, 1144, 1431, 1724, 1855
Bse1I ACTGG 9 cut(s) 430, 565, 605, 692, 797, 888, 1349, 2066, 2089
Bse3DI GCAATG 2 cut(s) 866, 1039
BseAI TCCGGA 1 cut(s) 2028
BseBI CCWGG 7 cut(s) 110, 732, 1000, 1719, 1836, 1907, 2001
BseDI CCNNGG 4 cut(s) 108, 731, 1835, 1906
BseGI GGATG 8 cut(s) 102, 447, 552, 1733, 1864, 1916, 1993, 2140
BseLI CCNNNNNNNGG 6 cut(s) 716, 877, 1144, 1431, 1724, 1855
BseMI GCAATG 2 cut(s) 866, 1039
BseMII CTCAG 5 cut(s) 1107, 1119, 1485, 1625, 2172
BseNI ACTGG 9 cut(s) 430, 565, 605, 692, 797, 888, 1349, 2066, 2089
BseRI GAGGAG 2 cut(s) 752, 2188
BseSI GKGCMC 1 cut(s) 1905
BseXI GCAGC 6 cut(s) 364, 916, 1092, 1144, 1236, 1773
Bsh1236I CGCG 1 cut(s) 666
BshFI GGCC 7 cut(s) 34, 251, 709, 796, 998, 1653, 2065
BsiHKAI GWGCWC 5 cut(s) 387, 1030, 1492, 1905, 1971
BsiSI CCGG 2 cut(s) 1505, 2029
BslFI GGGAC 2 cut(s) 740, 1905
BslI CCNNNNNNNGG 6 cut(s) 716, 877, 1144, 1431, 1724, 1855
BsmAI GTCTC 1 cut(s) 2161
BsmFI GGGAC 2 cut(s) 740, 1905
BsmI GAATGC 2 cut(s) 235, 1414
BsnI GGCC 7 cut(s) 34, 251, 709, 796, 998, 1653, 2065
Bsp1286I GDGCHC 5 cut(s) 387, 1030, 1492, 1905, 1971
Bsp13I TCCGGA 1 cut(s) 2028
Bsp1407I TGTACA 3 cut(s) 316, 1537, 1819
Bsp143I GATC 8 cut(s) 117, 456, 639, 901, 961, 991, 1201, 1556
BspACI CCGC 6 cut(s) 195, 664, 758, 1010, 1338, 1571
BspANI GGCC 7 cut(s) 34, 251, 709, 796, 998, 1653, 2065
BspCNI CTCAG 5 cut(s) 1108, 1120, 1486, 1624, 2171
BspEI TCCGGA 1 cut(s) 2028
BspFNI CGCG 1 cut(s) 666
BspHI TCATGA 1 cut(s) 2056
BspLI GGNNCC 1 cut(s) 161
BspMAI CTGCAG 3 cut(s) 142, 382, 1110
BspMI ACCTGC 1 cut(s) 1866
BspPI GGATC 3 cut(s) 969, 1209, 1564
BspTI CTTAAG 1 cut(s) 1474
BsrBI CCGCTC 1 cut(s) 760
BsrDI GCAATG 2 cut(s) 866, 1039
BsrGI TGTACA 3 cut(s) 316, 1537, 1819
BsrI ACTGG 9 cut(s) 430, 565, 605, 692, 797, 888, 1349, 2066, 2089
BssECI CCNNGG 4 cut(s) 108, 731, 1835, 1906
BssMI GATC 8 cut(s) 117, 456, 639, 901, 961, 991, 1201, 1556
Bst2UI CCWGG 7 cut(s) 110, 732, 1000, 1719, 1836, 1907, 2001
Bst4CI ACNGT 4 cut(s) 247, 619, 1927, 2193
Bst6I CTCTTC 2 cut(s) 525, 936
BstAFI CTTAAG 1 cut(s) 1474
BstAPI GCANNNNNTGC 2 cut(s) 1025, 1088
BstAUI TGTACA 3 cut(s) 316, 1537, 1819
BstBAI YACGTR 1 cut(s) 557
BstC8I GCNNGC 8 cut(s) 10, 36, 233, 1030, 1080, 1356, 1809, 1997
BstDEI CTNAG 9 cut(s) 565, 1116, 1128, 1494, 1611, 1782, 1800, 1887, 2158
BstF5I GGATG 8 cut(s) 102, 447, 552, 1733, 1864, 1916, 1993, 2140
BstFNI CGCG 1 cut(s) 666
BstH2I RGCGCY 2 cut(s) 1138, 1378
BstHHI GCGC 4 cut(s) 668, 1137, 1377, 1510
BstKTI GATC 8 cut(s) 120, 459, 642, 904, 964, 994, 1204, 1559
BstMAI GTCTC 1 cut(s) 2161
BstMBI GATC 8 cut(s) 117, 456, 639, 901, 961, 991, 1201, 1556
BstMWI GCNNNNNNNGC 6 cut(s) 31, 1016, 1025, 1088, 1381, 1457
BstNI CCWGG 7 cut(s) 110, 732, 1000, 1719, 1836, 1907, 2001
BstNSI RCATGY 8 cut(s) 12, 235, 437, 730, 869, 929, 1082, 1999
BstSCI CCNGG 7 cut(s) 108, 730, 998, 1717, 1834, 1905, 1999
BstSFI CTRYAG 3 cut(s) 138, 378, 1106
BstSLI GKGCMC 1 cut(s) 1905
BstUI CGCG 1 cut(s) 666
BstV1I GCAGC 6 cut(s) 364, 916, 1092, 1144, 1236, 1773
BstX2I RGATCY 2 cut(s) 961, 1201
BstXI CCANNNNNNTGG 2 cut(s) 109, 156
BstYI RGATCY 2 cut(s) 961, 1201
BsuI GTATCC 1 cut(s) 2025
BsuRI GGCC 7 cut(s) 34, 251, 709, 796, 998, 1653, 2065
BtsCI GGATG 8 cut(s) 102, 447, 552, 1733, 1864, 1916, 1993, 2140
BtsI GCAGTG 3 cut(s) 147, 264, 1731
BtsIMutI CAGTG 6 cut(s) 147, 264, 699, 1356, 1731, 1887
BveI ACCTGC 1 cut(s) 1866
Cac8I GCNNGC 8 cut(s) 10, 36, 233, 1030, 1080, 1356, 1809, 1997
CaiI CAGNNNCTG 1 cut(s) 1138
CciI TCATGA 1 cut(s) 2056
CfoI GCGC 4 cut(s) 668, 1137, 1377, 1510
Cfr13I GGNCC 2 cut(s) 160, 1715
Csp6I GTAC 7 cut(s) 64, 317, 411, 558, 620, 1538, 1820
CspCI CAANNNNNGTGG 2 cut(s) 228, 263
CviQI GTAC 7 cut(s) 64, 317, 411, 558, 620, 1538, 1820
DdeI CTNAG 9 cut(s) 565, 1116, 1128, 1494, 1611, 1782, 1800, 1887, 2158
DpnI GATC 8 cut(s) 119, 458, 641, 903, 963, 993, 1203, 1558
DpnII GATC 8 cut(s) 117, 456, 639, 901, 961, 991, 1201, 1556
DraIII CACNNNGTG 1 cut(s) 1975
EaeI YGGCCR 5 cut(s) 32, 249, 794, 996, 2063
Eam1104I CTCTTC 2 cut(s) 525, 936
EarI CTCTTC 2 cut(s) 525, 936
Ecl136II GAGCTC 1 cut(s) 385
Eco24I GRGCYC 1 cut(s) 387
Eco47I GGWCC 2 cut(s) 160, 1715
Eco53kI GAGCTC 1 cut(s) 385
Eco57I CTGAAG 1 cut(s) 1214
EcoICRI GAGCTC 1 cut(s) 385
EcoO109I RGGNCCY 2 cut(s) 160, 1715
EcoRII CCWGG 7 cut(s) 108, 730, 998, 1717, 1834, 1905, 1999
EcoT22I ATGCAT 2 cut(s) 237, 1080
EcoT38I GRGCYC 1 cut(s) 387
FaqI GGGAC 2 cut(s) 740, 1905
FauI CCCGC 1 cut(s) 765
FbaI TGATCA 2 cut(s) 639, 901
FblI GTMKAC 1 cut(s) 430
Fnu4HI GCNGC 7 cut(s) 378, 930, 1106, 1133, 1225, 1338, 1787
FokI GGATG 8 cut(s) 89, 454, 559, 1740, 1871, 1923, 2000, 2147
FriOI GRGCYC 1 cut(s) 387
Fsp4HI GCNGC 7 cut(s) 378, 930, 1106, 1133, 1225, 1338, 1787
FspBI CTAG 1 cut(s) 351
GlaI GCGC 4 cut(s) 667, 1136, 1376, 1509
GluI GCNGC 7 cut(s) 378, 930, 1106, 1133, 1225, 1338, 1787
GsuI CTGGAG 2 cut(s) 131, 675
HaeII RGCGCY 2 cut(s) 1138, 1378
HaeIII GGCC 7 cut(s) 34, 251, 709, 796, 998, 1653, 2065
HapII CCGG 2 cut(s) 1505, 2029
HhaI GCGC 4 cut(s) 668, 1137, 1377, 1510
Hin6I GCGC 4 cut(s) 666, 1135, 1375, 1508
HinP1I GCGC 4 cut(s) 666, 1135, 1375, 1508
HincII GTYRAC 3 cut(s) 431, 807, 1122
HindII GTYRAC 3 cut(s) 431, 807, 1122
HinfI GANTC 6 cut(s) 601, 944, 1469, 1550, 1778, 1893
HpaII CCGG 2 cut(s) 1505, 2029
HphI GGTGA 2 cut(s) 1160, 1376
Hpy166II GTNNAC 8 cut(s) 413, 431, 807, 1122, 1538, 1646, 1903, 2046
Hpy188I TCNGA 6 cut(s) 73, 461, 847, 1271, 1468, 2188
Hpy8I GTNNAC 8 cut(s) 413, 431, 807, 1122, 1538, 1646, 1903, 2046
HpyAV CCTTC 3 cut(s) 1238, 1424, 1706
HpyCH4III ACNGT 4 cut(s) 247, 619, 1927, 2193
HpyCH4IV ACGT 4 cut(s) 556, 592, 1953, 2053
HpyF10VI GCNNNNNNNGC 6 cut(s) 31, 1016, 1025, 1088, 1381, 1457
HpyF3I CTNAG 9 cut(s) 565, 1116, 1128, 1494, 1611, 1782, 1800, 1887, 2158
HpySE526I ACGT 4 cut(s) 556, 592, 1953, 2053
HspAI GCGC 4 cut(s) 666, 1135, 1375, 1508
Kpn2I TCCGGA 1 cut(s) 2028
Ksp22I TGATCA 2 cut(s) 639, 901
Kzo9I GATC 8 cut(s) 117, 456, 639, 901, 961, 991, 1201, 1556
LmnI GCTCC 6 cut(s) 197, 765, 973, 1434, 1495, 2197
Lsp1109I GCAGC 6 cut(s) 364, 916, 1092, 1144, 1236, 1773
LweI GCATC 8 cut(s) 214, 432, 537, 825, 1310, 1446, 1718, 2209
MaeI CTAG 1 cut(s) 351
MaeII ACGT 4 cut(s) 556, 592, 1953, 2053
MaeIII GTNAC 7 cut(s) 921, 1166, 1364, 1795, 1882, 1918, 2012
MalI GATC 8 cut(s) 119, 458, 641, 903, 963, 993, 1203, 1558
MbiI CCGCTC 1 cut(s) 760
MboI GATC 8 cut(s) 117, 456, 639, 901, 961, 991, 1201, 1556
MboII GAAGA 6 cut(s) 379, 542, 623, 953, 1089, 1229
MfeI CAATTG 2 cut(s) 13, 1935
MflI RGATCY 2 cut(s) 961, 1201
MhlI GDGCHC 5 cut(s) 387, 1030, 1492, 1905, 1971
MlsI TGGCCA 4 cut(s) 34, 251, 796, 998
MluNI TGGCCA 4 cut(s) 34, 251, 796, 998
MlyI GAGTC 2 cut(s) 953, 1887
MmeI TCCRAC 2 cut(s) 858, 2175
Mox20I TGGCCA 4 cut(s) 34, 251, 796, 998
Mph1103I ATGCAT 2 cut(s) 237, 1080
MroI TCCGGA 1 cut(s) 2028
MscI TGGCCA 4 cut(s) 34, 251, 796, 998
MslI CAYNNNNRTG 3 cut(s) 154, 257, 870
Msp20I TGGCCA 4 cut(s) 34, 251, 796, 998
MspA1I CMGCKG 1 cut(s) 38
MspCI CTTAAG 1 cut(s) 1474
MspI CCGG 2 cut(s) 1505, 2029
MspR9I CCNGG 7 cut(s) 110, 732, 1000, 1719, 1836, 1907, 2001
MunI CAATTG 2 cut(s) 13, 1935
Mva1269I GAATGC 2 cut(s) 235, 1414
MvaI CCWGG 7 cut(s) 110, 732, 1000, 1719, 1836, 1907, 2001
MvnI CGCG 1 cut(s) 666
MwoI GCNNNNNNNGC 6 cut(s) 31, 1016, 1025, 1088, 1381, 1457
NdeII GATC 8 cut(s) 117, 456, 639, 901, 961, 991, 1201, 1556
NlaIV GGNNCC 1 cut(s) 161
NmuCI GTSAC 5 cut(s) 921, 1166, 1364, 1795, 1882
NsiI ATGCAT 2 cut(s) 237, 1080
NspI RCATGY 8 cut(s) 12, 235, 437, 730, 869, 929, 1082, 1999
PaeI GCATGC 4 cut(s) 12, 235, 1082, 1999
PagI TCATGA 1 cut(s) 2056
PciI ACATGT 1 cut(s) 433
PctI GAATGC 2 cut(s) 235, 1414
PfeI GAWTC 4 cut(s) 601, 1469, 1550, 1778
PflMI CCANNNNNTGG 1 cut(s) 877
PfoI TCCNGGA 1 cut(s) 1717
PkrI GCNGC 7 cut(s) 379, 931, 1107, 1134, 1226, 1339, 1788
PleI GAGTC 2 cut(s) 952, 1887
PpsI GAGTC 2 cut(s) 952, 1887
Ppu21I YACGTR 1 cut(s) 557
PpuMI RGGWCCY 2 cut(s) 160, 1715
PscI ACATGT 1 cut(s) 433
PshBI ATTAAT 1 cut(s) 786
Psp124BI GAGCTC 1 cut(s) 387
Psp5II RGGWCCY 2 cut(s) 160, 1715
Psp6I CCWGG 7 cut(s) 108, 730, 998, 1717, 1834, 1905, 1999
PspGI CCWGG 7 cut(s) 108, 730, 998, 1717, 1834, 1905, 1999
PspN4I GGNNCC 1 cut(s) 161
PspPI GGNCC 2 cut(s) 160, 1715
PspPPI RGGWCCY 2 cut(s) 160, 1715
PstI CTGCAG 3 cut(s) 142, 382, 1110
PstNI CAGNNNCTG 1 cut(s) 1138
PsuI RGATCY 2 cut(s) 961, 1201
PvuII CAGCTG 1 cut(s) 38
RsaI GTAC 7 cut(s) 65, 318, 412, 559, 621, 1539, 1821
RsaNI GTAC 7 cut(s) 64, 317, 411, 558, 620, 1538, 1820
RseI CAYNNNNRTG 3 cut(s) 154, 257, 870
SacI GAGCTC 1 cut(s) 387
SalI GTCGAC 1 cut(s) 429
SatI GCNGC 7 cut(s) 378, 930, 1106, 1133, 1225, 1338, 1787
Sau3AI GATC 8 cut(s) 117, 456, 639, 901, 961, 991, 1201, 1556
Sau96I GGNCC 2 cut(s) 160, 1715
SchI GAGTC 2 cut(s) 953, 1887
ScrFI CCNGG 7 cut(s) 110, 732, 1000, 1719, 1836, 1907, 2001
SduI GDGCHC 5 cut(s) 387, 1030, 1492, 1905, 1971
SfaNI GCATC 8 cut(s) 214, 432, 537, 825, 1310, 1446, 1718, 2209
SfcI CTRYAG 3 cut(s) 138, 378, 1106
SinI GGWCC 2 cut(s) 160, 1715
SmiMI CAYNNNNRTG 3 cut(s) 154, 257, 870
SmlI CTYRAG 3 cut(s) 1235, 1474, 1962
SmoI CTYRAG 3 cut(s) 1235, 1474, 1962
SphI GCATGC 4 cut(s) 12, 235, 1082, 1999
SsiI CCGC 6 cut(s) 195, 664, 758, 1010, 1338, 1571
SspI AATATT 2 cut(s) 936, 982
SspMI CTAG 1 cut(s) 351
SstI GAGCTC 1 cut(s) 387
StyD4I CCNGG 7 cut(s) 108, 730, 998, 1717, 1834, 1905, 1999
TaaI ACNGT 4 cut(s) 247, 619, 1927, 2193
TaiI ACGT 4 cut(s) 559, 595, 1956, 2056
TaqI TCGA 5 cut(s) 387, 430, 504, 1627, 2203
TatI WGTACW 4 cut(s) 63, 316, 1537, 1819
TauI GCSGC 1 cut(s) 1340
TfiI GAWTC 4 cut(s) 601, 1469, 1550, 1778
TscAI CASTG 6 cut(s) 147, 271, 699, 1356, 1738, 1887
TseFI GTSAC 5 cut(s) 921, 1166, 1364, 1795, 1882
TseI GCWGC 6 cut(s) 377, 929, 1105, 1132, 1224, 1786
Tsp45I GTSAC 5 cut(s) 921, 1166, 1364, 1795, 1882
TspGWI ACGGA 1 cut(s) 1475
TspRI CASTG 6 cut(s) 147, 271, 699, 1356, 1738, 1887
Van91I CCANNNNNTGG 1 cut(s) 877
Vha464I CTTAAG 1 cut(s) 1474
VneI GTGCAC 1 cut(s) 1901
VpaK11BI GGWCC 2 cut(s) 160, 1715
VspI ATTAAT 1 cut(s) 786
XapI RAATTY 3 cut(s) 1330, 1598, 1630
XceI RCATGY 8 cut(s) 12, 235, 437, 730, 869, 929, 1082, 1999
XmiI GTMKAC 1 cut(s) 430
XspI CTAG 1 cut(s) 351
Zsp2I ATGCAT 2 cut(s) 237, 1080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.