Rh2DG298800

May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0003094
Physical Location & Seq
Reverse (-)
35431527 .. 35437117
5591 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG298800.1

Sequence Viewer

Length: 1899 bp
ATGGAGGCCTGCAACTGTATTGAGCCGCAGTGGCCGGCTGATGAGCTGCTGATGAAGTACCAGTACATTTCGGACTTCTTTATTGCGCTTGCTTATTTCTCAATCCCTCTGGAGCTGATATACTTTGTCAAGAAATCCGCAGTGTTTCCATACAGATGGGTGCTTGTTCAGTTTGGTGCTTTCATCGTCTTGTGCGGCGCCACCCATCTTATTAACTTGTGGACTTTCAACATGCATTCTAGGACTGTGGCCTTAGTAATGACTACTGCCAAGGTTCTGACCGCTGTGGTTTCGTGCGCCACGGCGTTGATGCTTGTGCATATTATTCCTGATTTGCTGAGTGTTAAGACTAGGGAGTTGTTCTTGAAGAATAAGGCTGCAGAGCTTGATAGGGAAATGGGGCTGATTCGGACTCAGGAGGAAACCGGTCGGCATGTCAGGATGCTGACACATGAGATTAGAAGTACTCTTGATAGACATACTATCCTGAAAACCACACTTGTTGAGTTGGGTAGAACTTTGGCATTGGAAGAGTGTGCGTTGTGGATGCCCACGCGTACTGCGTTAGAGCTGCAACTGTCGTACACACTCCATCAGCAGAATCCGGTGGGACATACCGTACCCATTCATCTTCCTGTGATCAATCAAGTGTTTAGCAGCAACCATGCCGTGAAGATATCGCCGAATTCCCCAGTGGCAAGACTGAGGCCACGTGCGGGAAAGCATATGCCTGGAGAGGTTGTTGCTGTTCGTGTCCCTCTCCTGCATCTCTCAAACTTCCAAATCAATGACTGGCCTGAGCTCTCAACAAAACGCTATGCTTTGATGGTGTTGATGCTCCCTTCCGATAGTGCAAGGCAATGGCATATGCATGAGTTAGAGCTGGTTGAGGTAGTTGCTGACCAGGTAGCAGTTGCTCTATCACACGCTGCTATCTTAGAAGAGTCAAGGAGAGCGAGGGATCTGCTAATGGAGCAGAATATTGCACTTGATCTGGCTAGGAGGGAAGCAGAAACGGCAATTTGTGCTCGCAATGATTTCTTGGCCGTTATGAACCATGAGATGAGAACTCCCATGCATGCAATTATTGCTCTGTCTTCCTTGCTGCAGGAAACTGAGCTGACACCGGAGCAGCGCCTAATGGTTGAAACAATATTAAAGAGCAGTAACCTTTTGGCTACCCTCATAAATGATGTATTAGATCTTTCAAGACTAGAAGATGGCAGCCTTCAACTTGACATAGCAACTTTTAACCTCCATTCTGTATTTATAGAGGTTCATAATTTAATTAAGCCTATTGCATCTGTTAAAAAGTTGTCGGTTACATTAAATTTAGCAGCAGATCTGCCAGTGTATGCGATAGGTGATGAAAAGCGCCTTATGCAAACTATTCTAAATGTTGTTGGGAATGCTGTGAAGTTTTCAAAAGAAGGGAGCATCTGGATTACAGTTTTTGTTGCGAAATCAGAATCTTTAAGAGATTTCCATGCTGCTGATTTTTTTCCTGTGCAAAGTGATAATCACTTTTATCTGCGTGTACAGGTAAAAGATTCAGGATCTGGAATCAATCCCCAGGATCTTCCGAAGCTATTCACCAAATTTGCACAGAATCAGTCATTAGCTACTAGAAATTCTGGTGGTAGTGGACTTGGTTTGGCTATCTGTAAGAGATTTGTAAATCTTATGGAGGGGCATATTTGGATTGAAAGTGAAGGTCTCGGCAAGGGATGCACTGCCAATTTCATTGTGAAACTCGGCTATCCGGAGCGATCAAATGAGTCTAAGCTGCCTTTTCTGCCTAAGATGCGAGCAACTCATGTTCAAACAAACTTTCCAGGGTTGAAAGTTCTTGTCATGGATGATAATGGGTCAGTAACAGCCACCTTTCTTACTCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000160 GO:0001101 GO:0002237 GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009308 GO:0009408 GO:0009593 GO:0009605 GO:0009607 GO:0009617 GO:0009625 GO:0009628 GO:0009651 GO:0009690 GO:0009719 GO:0009720 GO:0009723 GO:0009725 GO:0009726 GO:0009727 GO:0009733 GO:0009737 GO:0009739 GO:0009743 GO:0009755 GO:0009756 GO:0009873 GO:0009888 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010087 GO:0010104 GO:0010105 GO:0010119 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0016999 GO:0017000 GO:0017144 GO:0018106 GO:0018193 GO:0018202 GO:0019538 GO:0023051 GO:0023052 GO:0023057 GO:0032502 GO:0032870 GO:0033036 GO:0033037 GO:0033554 GO:0033993 GO:0034754 GO:0035556 GO:0036211 GO:0038023 GO:0038199 GO:0042221 GO:0042445 GO:0042545 GO:0042562 GO:0042742 GO:0042743 GO:0042802 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0046483 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048856 GO:0050665 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051239 GO:0051301 GO:0051606 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0051740 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0060089 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070727 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071369 GO:0071495 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0072328 GO:0072593 GO:0097305 GO:0098542 GO:0140096 GO:1900140 GO:1901564 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:1903409 GO:2000026
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
GAF HATPase_c HisKA Response_reg

Protein Analysis

632

Amino Acids

70.94

Weight (kDa)

6.93

Isoelectric Point (pI)

45.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ETR1_N PF25487 17 - 115 5.4e-40 Ethylene receptor 1-like, N-terminal domain
GAF PF01590 158 - 307 6.8e-12 GAF domain
HisKA PF00512 343 - 408 2.6e-19 His Kinase A (phospho-acceptor) domain
HATPase_c PF02518 455 - 585 1.9e-25 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 197
AccII CGCG 1 cut(s) 556
AccIII TCCGGA 1 cut(s) 1762
AciI CCGC 5 cut(s) 26, 138, 195, 282, 716
AclWI GGATC 3 cut(s) 969, 1564, 1584
AcoI YGGCCR 2 cut(s) 32, 1044
AcsI RAATTY 4 cut(s) 685, 1330, 1598, 1630
AcvI CACGTG 1 cut(s) 713
AcyI GRCGYC 1 cut(s) 198
AfaI GTAC 7 cut(s) 59, 65, 466, 559, 584, 621, 1539
AfiI CCNNNNNNNGG 1 cut(s) 716
AflIII ACRYGT 1 cut(s) 554
AgeI ACCGGT 1 cut(s) 425
AgsI TTSAA 9 cut(s) 229, 367, 1148, 1209, 1232, 1425, 1706, 1823, 1843
AjnI CCWGG 4 cut(s) 730, 903, 1572, 1834
Alw21I GWGCWC 2 cut(s) 804, 1030
Alw26I GTCTC 1 cut(s) 1721
AlwI GGATC 3 cut(s) 969, 1564, 1584
AlwNI CAGNNNCTG 1 cut(s) 1559
Aor13HI TCCGGA 1 cut(s) 1762
AoxI GGCC 6 cut(s) 6, 32, 249, 707, 794, 1044
ApoI RAATTY 4 cut(s) 685, 1330, 1598, 1630
AsiGI ACCGGT 1 cut(s) 425
Asp700I GAANNNNTTC 1 cut(s) 1589
AspLEI GCGC 5 cut(s) 88, 200, 299, 1137, 1377
AsuHPI GGTGA 2 cut(s) 1376, 1585
BanI GGYRCC 1 cut(s) 197
BanII GRGCYC 1 cut(s) 804
BarI GAAGNNNNNNTAC 2 cut(s) 47, 79
BbrPI CACGTG 1 cut(s) 713
BbsI GAAGAC 1 cut(s) 1089
Bbv12I GWGCWC 2 cut(s) 804, 1030
BccI CCATC 5 cut(s) 150, 213, 600, 820, 1214
BceAI ACGGC 4 cut(s) 318, 653, 1031, 1032
BcgI CGANNNNNNTGC 2 cut(s) 946, 980
BciT130I CCWGG 4 cut(s) 732, 905, 1574, 1836
BclI TGATCA 1 cut(s) 639
BcoDI GTCTC 1 cut(s) 1721
BfaI CTAG 5 cut(s) 240, 351, 999, 1214, 1626
BfmI CTRYAG 2 cut(s) 378, 1106
BfoI RGCGCY 3 cut(s) 201, 1138, 1378
BglI GCCNNNNNGGC 1 cut(s) 31
BglII AGATCT 2 cut(s) 1201, 1342
BmcAI AGTACT 1 cut(s) 466
Bme1390I CCNGG 4 cut(s) 732, 905, 1574, 1836
BmiI GGNNCC 1 cut(s) 199
BmrFI CCNGG 4 cut(s) 732, 905, 1574, 1836
BmrI ACTGGG 1 cut(s) 686
BmsI GCATC 9 cut(s) 300, 432, 537, 775, 825, 1310, 1446, 1718, 1794
BmuI ACTGGG 1 cut(s) 686
BpiI GAAGAC 1 cut(s) 1089
BpmI CTGGAG 2 cut(s) 131, 753
Bpu10I CCTNAGC 1 cut(s) 798
BsaAI YACGTR 1 cut(s) 713
BsaHI GRCGYC 1 cut(s) 198
BsaI GGTCTC 1 cut(s) 1721
BsaJI CCNNGG 4 cut(s) 270, 300, 1572, 1835
BsaWI WCCGGW 4 cut(s) 425, 604, 1126, 1762
BsaXI ACNNNNNCTCC 2 cut(s) 726, 756
Bsc4I CCNNNNNNNGG 1 cut(s) 716
Bse118I RCCGGY 2 cut(s) 34, 425
Bse1I ACTGG 4 cut(s) 61, 692, 797, 1349
Bse3DI GCAATG 2 cut(s) 866, 1039
BseAI TCCGGA 1 cut(s) 1762
BseBI CCWGG 4 cut(s) 732, 905, 1574, 1836
BseDI CCNNGG 4 cut(s) 270, 300, 1572, 1835
BseGI GGATG 4 cut(s) 447, 552, 1733, 1864
BseLI CCNNNNNNNGG 1 cut(s) 716
BseMI GCAATG 2 cut(s) 866, 1039
BseMII CTCAG 5 cut(s) 329, 428, 695, 789, 1107
BseNI ACTGG 4 cut(s) 61, 692, 797, 1349
Bsh1236I CGCG 1 cut(s) 556
Bsh1285I CGRYCG 1 cut(s) 430
BshFI GGCC 6 cut(s) 8, 34, 251, 709, 796, 1046
BshNI GGYRCC 1 cut(s) 197
BshTI ACCGGT 1 cut(s) 425
BsiEI CGRYCG 1 cut(s) 430
BsiHKAI GWGCWC 2 cut(s) 804, 1030
BsiSI CCGG 5 cut(s) 35, 426, 605, 1127, 1763
BslFI GGGAC 2 cut(s) 624, 740
BslI CCNNNNNNNGG 1 cut(s) 716
BsmAI GTCTC 1 cut(s) 1721
BsmFI GGGAC 2 cut(s) 624, 740
BsmI GAATGC 2 cut(s) 235, 1414
BsnI GGCC 6 cut(s) 8, 34, 251, 709, 796, 1046
Bso31I GGTCTC 1 cut(s) 1721
Bsp1286I GDGCHC 2 cut(s) 804, 1030
Bsp13I TCCGGA 1 cut(s) 1762
Bsp1407I TGTACA 1 cut(s) 1537
Bsp143I GATC 8 cut(s) 639, 961, 991, 1201, 1342, 1556, 1576, 1769
BspACI CCGC 5 cut(s) 26, 138, 195, 282, 716
BspANI GGCC 6 cut(s) 8, 34, 251, 709, 796, 1046
BspCNI CTCAG 5 cut(s) 330, 427, 696, 790, 1108
BspEI TCCGGA 1 cut(s) 1762
BspFNI CGCG 1 cut(s) 556
BspLI GGNNCC 1 cut(s) 199
BspMAI CTGCAG 2 cut(s) 382, 1110
BspPI GGATC 3 cut(s) 969, 1564, 1584
BspT107I GGYRCC 1 cut(s) 197
BspTNI GGTCTC 1 cut(s) 1721
BsrDI GCAATG 2 cut(s) 866, 1039
BsrFI RCCGGY 2 cut(s) 34, 425
BsrGI TGTACA 1 cut(s) 1537
BsrI ACTGG 4 cut(s) 61, 692, 797, 1349
BssAI RCCGGY 2 cut(s) 34, 425
BssECI CCNNGG 4 cut(s) 270, 300, 1572, 1835
BssMI GATC 8 cut(s) 639, 961, 991, 1201, 1342, 1556, 1576, 1769
BssNI GRCGYC 1 cut(s) 198
BssT1I CCWWGG 1 cut(s) 270
Bst2UI CCWGG 4 cut(s) 732, 905, 1574, 1836
Bst4CI ACNGT 5 cut(s) 17, 247, 579, 619, 1450
Bst6I CTCTTC 2 cut(s) 525, 936
BstACI GRCGYC 1 cut(s) 198
BstAPI GCANNNNNTGC 3 cut(s) 1025, 1088, 1728
BstAUI TGTACA 1 cut(s) 1537
BstBAI YACGTR 1 cut(s) 713
BstC8I GCNNGC 6 cut(s) 10, 36, 90, 1030, 1080, 1809
BstDEI CTNAG 9 cut(s) 253, 338, 414, 704, 798, 937, 1116, 1782, 1800
BstDSI CCRYGG 1 cut(s) 300
BstF5I GGATG 4 cut(s) 447, 552, 1733, 1864
BstFNI CGCG 1 cut(s) 556
BstH2I RGCGCY 3 cut(s) 201, 1138, 1378
BstHHI GCGC 5 cut(s) 88, 200, 299, 1137, 1377
BstKTI GATC 8 cut(s) 642, 964, 994, 1204, 1345, 1559, 1579, 1772
BstMAI GTCTC 1 cut(s) 1721
BstMBI GATC 8 cut(s) 639, 961, 991, 1201, 1342, 1556, 1576, 1769
BstMCI CGRYCG 1 cut(s) 430
BstMWI GCNNNNNNNGC 9 cut(s) 31, 973, 1016, 1025, 1088, 1381, 1728, 1795, 1804
BstNI CCWGG 4 cut(s) 732, 905, 1574, 1836
BstNSI RCATGY 3 cut(s) 235, 437, 1082
BstSCI CCNGG 4 cut(s) 730, 903, 1572, 1834
BstSFI CTRYAG 2 cut(s) 378, 1106
BstUI CGCG 1 cut(s) 556
BstV2I GAAGAC 1 cut(s) 1089
BstX2I RGATCY 5 cut(s) 961, 1201, 1342, 1556, 1576
BstXI CCANNNNNNTGG 1 cut(s) 156
BstYI RGATCY 5 cut(s) 961, 1201, 1342, 1556, 1576
BsuRI GGCC 6 cut(s) 8, 34, 251, 709, 796, 1046
BtgI CCRYGG 1 cut(s) 300
BtsCI GGATG 4 cut(s) 447, 552, 1733, 1864
BtsI GCAGTG 3 cut(s) 35, 147, 1731
BtsIMutI CAGTG 5 cut(s) 35, 147, 699, 1356, 1731
Cac8I GCNNGC 6 cut(s) 10, 36, 90, 1030, 1080, 1809
CaiI CAGNNNCTG 1 cut(s) 1559
CfoI GCGC 5 cut(s) 88, 200, 299, 1137, 1377
Cfr10I RCCGGY 2 cut(s) 34, 425
CsiI ACCWGGT 1 cut(s) 903
Csp6I GTAC 7 cut(s) 58, 64, 465, 558, 583, 620, 1538
CspAI ACCGGT 1 cut(s) 425
CspCI CAANNNNNGTGG 2 cut(s) 484, 519
CviQI GTAC 7 cut(s) 58, 64, 465, 558, 583, 620, 1538
DdeI CTNAG 9 cut(s) 253, 338, 414, 704, 798, 937, 1116, 1782, 1800
DinI GGCGCC 1 cut(s) 199
DpnI GATC 8 cut(s) 641, 963, 993, 1203, 1344, 1558, 1578, 1771
DpnII GATC 8 cut(s) 639, 961, 991, 1201, 1342, 1556, 1576, 1769
EaeI YGGCCR 2 cut(s) 32, 1044
Eam1104I CTCTTC 2 cut(s) 525, 936
EarI CTCTTC 2 cut(s) 525, 936
Ecl136II GAGCTC 1 cut(s) 802
Eco130I CCWWGG 1 cut(s) 270
Eco147I AGGCCT 1 cut(s) 8
Eco24I GRGCYC 1 cut(s) 804
Eco31I GGTCTC 1 cut(s) 1721
Eco32I GATATC 1 cut(s) 678
Eco53kI GAGCTC 1 cut(s) 802
Eco72I CACGTG 1 cut(s) 713
EcoICRI GAGCTC 1 cut(s) 802
EcoRI GAATTC 1 cut(s) 685
EcoRII CCWGG 4 cut(s) 730, 903, 1572, 1834
EcoRV GATATC 1 cut(s) 678
EcoT14I CCWWGG 1 cut(s) 270
EcoT22I ATGCAT 3 cut(s) 237, 873, 1080
EcoT38I GRGCYC 1 cut(s) 804
EgeI GGCGCC 1 cut(s) 199
EheI GGCGCC 1 cut(s) 199
ErhI CCWWGG 1 cut(s) 270
FaqI GGGAC 2 cut(s) 624, 740
FauI CCCGC 1 cut(s) 709
FauNDI CATATG 2 cut(s) 726, 867
FbaI TGATCA 1 cut(s) 639
FokI GGATG 4 cut(s) 454, 559, 1740, 1871
FriOI GRGCYC 1 cut(s) 804
FspBI CTAG 5 cut(s) 240, 351, 999, 1214, 1626
GlaI GCGC 5 cut(s) 87, 199, 298, 1136, 1376
GsuI CTGGAG 2 cut(s) 131, 753
HaeII RGCGCY 3 cut(s) 201, 1138, 1378
HaeIII GGCC 6 cut(s) 8, 34, 251, 709, 796, 1046
HapII CCGG 5 cut(s) 35, 426, 605, 1127, 1763
HhaI GCGC 5 cut(s) 88, 200, 299, 1137, 1377
Hin1I GRCGYC 1 cut(s) 198
Hin6I GCGC 5 cut(s) 86, 198, 297, 1135, 1375
HinP1I GCGC 5 cut(s) 86, 198, 297, 1135, 1375
HinfI GANTC 9 cut(s) 406, 412, 601, 944, 1469, 1550, 1563, 1609, 1778
HpaII CCGG 5 cut(s) 35, 426, 605, 1127, 1763
HphI GGTGA 2 cut(s) 1376, 1585
Hpy166II GTNNAC 4 cut(s) 222, 585, 1538, 1646
Hpy188I TCNGA 6 cut(s) 73, 279, 411, 847, 1468, 1584
Hpy8I GTNNAC 4 cut(s) 222, 585, 1538, 1646
HpyAV CCTTC 4 cut(s) 852, 1238, 1424, 1706
HpyCH4III ACNGT 5 cut(s) 17, 247, 579, 619, 1450
HpyCH4IV ACGT 1 cut(s) 712
HpyF10VI GCNNNNNNNGC 9 cut(s) 31, 973, 1016, 1025, 1088, 1381, 1728, 1795, 1804
HpyF3I CTNAG 9 cut(s) 253, 338, 414, 704, 798, 937, 1116, 1782, 1800
HpySE526I ACGT 1 cut(s) 712
Hsp92I GRCGYC 1 cut(s) 198
HspAI GCGC 5 cut(s) 86, 198, 297, 1135, 1375
KasI GGCGCC 1 cut(s) 197
Kpn2I TCCGGA 1 cut(s) 1762
KroI GCCGGC 1 cut(s) 34
KroNI GCCGGC 1 cut(s) 36
Ksp22I TGATCA 1 cut(s) 639
Kzo9I GATC 8 cut(s) 639, 961, 991, 1201, 1342, 1556, 1576, 1769
LmnI GCTCC 6 cut(s) 112, 843, 973, 1129, 1434, 1765
LweI GCATC 9 cut(s) 300, 432, 537, 775, 825, 1310, 1446, 1718, 1794
MabI ACCWGGT 1 cut(s) 903
MaeI CTAG 5 cut(s) 240, 351, 999, 1214, 1626
MaeII ACGT 1 cut(s) 712
MaeIII GTNAC 3 cut(s) 1166, 1321, 1873
MalI GATC 8 cut(s) 641, 963, 993, 1203, 1344, 1558, 1578, 1771
MboI GATC 8 cut(s) 639, 961, 991, 1201, 1342, 1556, 1576, 1769
MboII GAAGA 8 cut(s) 379, 542, 623, 685, 953, 1089, 1229, 1571
MflI RGATCY 5 cut(s) 961, 1201, 1342, 1556, 1576
MhlI GDGCHC 2 cut(s) 804, 1030
MluCI AATT 9 cut(s) 685, 1020, 1083, 1282, 1287, 1330, 1598, 1630, 1738
MluI ACGCGT 1 cut(s) 554
Mly113I GGCGCC 1 cut(s) 198
MlyI GAGTC 3 cut(s) 406, 953, 1787
Mph1103I ATGCAT 3 cut(s) 237, 873, 1080
MroI TCCGGA 1 cut(s) 1762
MroNI GCCGGC 1 cut(s) 34
MroXI GAANNNNTTC 1 cut(s) 1589
MslI CAYNNNNRTG 2 cut(s) 154, 870
MspA1I CMGCKG 1 cut(s) 284
MspI CCGG 5 cut(s) 35, 426, 605, 1127, 1763
MspR9I CCNGG 4 cut(s) 732, 905, 1574, 1836
Mva1269I GAATGC 2 cut(s) 235, 1414
MvaI CCWGG 4 cut(s) 732, 905, 1574, 1836
MvnI CGCG 1 cut(s) 556
MwoI GCNNNNNNNGC 9 cut(s) 31, 973, 1016, 1025, 1088, 1381, 1728, 1795, 1804
NaeI GCCGGC 1 cut(s) 36
NarI GGCGCC 1 cut(s) 198
NdeI CATATG 2 cut(s) 726, 867
NdeII GATC 8 cut(s) 639, 961, 991, 1201, 1342, 1556, 1576, 1769
NgoMIV GCCGGC 1 cut(s) 34
NlaIV GGNNCC 1 cut(s) 199
NmeAIII GCCGAG 2 cut(s) 1698, 1734
NsiI ATGCAT 3 cut(s) 237, 873, 1080
NspI RCATGY 3 cut(s) 235, 437, 1082
PacI TTAATTAA 1 cut(s) 1290
PaeI GCATGC 1 cut(s) 1082
PceI AGGCCT 1 cut(s) 8
PcsI WCGNNNNNNNCGW 1 cut(s) 560
PctI GAATGC 2 cut(s) 235, 1414
PdiI GCCGGC 1 cut(s) 36
PdmI GAANNNNTTC 1 cut(s) 1589
PfeI GAWTC 6 cut(s) 406, 601, 1469, 1550, 1563, 1609
PinAI ACCGGT 1 cut(s) 425
PleI GAGTC 3 cut(s) 406, 952, 1786
PluTI GGCGCC 1 cut(s) 201
PmaCI CACGTG 1 cut(s) 713
PmlI CACGTG 1 cut(s) 713
PpsI GAGTC 3 cut(s) 406, 952, 1786
Ppu21I YACGTR 1 cut(s) 713
Psp124BI GAGCTC 1 cut(s) 804
Psp6I CCWGG 4 cut(s) 730, 903, 1572, 1834
PspCI CACGTG 1 cut(s) 713
PspGI CCWGG 4 cut(s) 730, 903, 1572, 1834
PspN4I GGNNCC 1 cut(s) 199
PstI CTGCAG 2 cut(s) 382, 1110
PstNI CAGNNNCTG 1 cut(s) 1559
PsuI RGATCY 5 cut(s) 961, 1201, 1342, 1556, 1576
RsaI GTAC 7 cut(s) 59, 65, 466, 559, 584, 621, 1539
RsaNI GTAC 7 cut(s) 58, 64, 465, 558, 583, 620, 1538
RseI CAYNNNNRTG 2 cut(s) 154, 870
SacI GAGCTC 1 cut(s) 804
Sau3AI GATC 8 cut(s) 639, 961, 991, 1201, 1342, 1556, 1576, 1769
ScaI AGTACT 1 cut(s) 466
SchI GAGTC 3 cut(s) 406, 953, 1787
ScrFI CCNGG 4 cut(s) 732, 905, 1574, 1836
SduI GDGCHC 2 cut(s) 804, 1030
SexAI ACCWGGT 1 cut(s) 903
SfaNI GCATC 9 cut(s) 300, 432, 537, 775, 825, 1310, 1446, 1718, 1794
SfcI CTRYAG 2 cut(s) 378, 1106
SfoI GGCGCC 1 cut(s) 199
SmiMI CAYNNNNRTG 2 cut(s) 154, 870
SphI GCATGC 1 cut(s) 1082
Sse9I AATT 9 cut(s) 685, 1020, 1083, 1282, 1287, 1330, 1598, 1630, 1738
SseBI AGGCCT 1 cut(s) 8
SsiI CCGC 5 cut(s) 26, 138, 195, 282, 716
SspDI GGCGCC 1 cut(s) 197
SspI AATATT 2 cut(s) 982, 1155
SspMI CTAG 5 cut(s) 240, 351, 999, 1214, 1626
SstI GAGCTC 1 cut(s) 804
StuI AGGCCT 1 cut(s) 8
StyD4I CCNGG 4 cut(s) 730, 903, 1572, 1834
StyI CCWWGG 1 cut(s) 270
TaaI ACNGT 5 cut(s) 17, 247, 579, 619, 1450
TaiI ACGT 1 cut(s) 715
TasI AATT 9 cut(s) 685, 1020, 1083, 1282, 1287, 1330, 1598, 1630, 1738
TatI WGTACW 3 cut(s) 63, 464, 1537
TauI GCSGC 2 cut(s) 28, 198
TfiI GAWTC 6 cut(s) 406, 601, 1469, 1550, 1563, 1609
TscAI CASTG 5 cut(s) 35, 147, 699, 1356, 1738
TspDTI ATGAA 7 cut(s) 68, 172, 617, 1067, 1268, 1383, 1732
TspRI CASTG 5 cut(s) 35, 147, 699, 1356, 1738
XapI RAATTY 4 cut(s) 685, 1330, 1598, 1630
XceI RCATGY 3 cut(s) 235, 437, 1082
XmnI GAANNNNTTC 1 cut(s) 1589
XspI CTAG 5 cut(s) 240, 351, 999, 1214, 1626
ZrmI AGTACT 1 cut(s) 466
Zsp2I ATGCAT 3 cut(s) 237, 873, 1080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.