FvH4_1g25970
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
17880202 .. 17886313
6112 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g25970.t1

Sequence Viewer

Length: 1626 bp
ATGCAAGCGTCAACGTTTGGTTCGATTAGGGAGAAGTTAGTTTTTGGGGTCAAAGTCCAACAGCAAAGAAGGGTGTTGGGTTTTGGTGATTTCAGAAGAACAAGTCTGTGTATGACTGATAAGGCCACTGTGCTCACTTCTGCTATGGGAGCCAAGCTTGCACGTCCTGGAATCGGGTTTGATGGGATTTCCATGAACTCGTTGAAACCCAGATCACTCAGGGCTCAGGCCTCTGCTGCAGATGGGGACATGGAGAATCTTGTTCCTCCCATGCCTCAGGTCAAATCTTCTGGAACAGTTTTGCCATATGTTGGTGTTGCCTGTCTTGGAGCCATTTTATTTGGTTATCATCTCGGGGTGGTAAATGGTGCTCTTGAGTACCTGTCAAAGGATCTTGGTATTGCTGAAAACGTTGGATTAAAAGGGTGGGTTGTTAGCACACTTCTAGCTGGTGCCACAGTTGGATCTTTCACTGGTGGAACATTGGCTGACAAGTTTGGGAGAGCTAGGACTTTCCAACTTGATGCGATTCCACTAACGATTGGAGCATTTTTATGTGCTACAGCCCAGAGTGTGGAGCAAATGATAATTGGTCGCTTACTTGCTGGAATTGGAATCGGCATCTCATCGGCTATTGTCCCACTTTATATTTCTGAGATCTCTCCAACTGAAATTCGAGGTGCACTTGGATCTGTAAACCAGCTTTTTATATGTCTTGGAATCCTTGGAGCACTGGTGGCTGGATTACCTTTATCAGCAAATCCGTTATGGTGGAGGACAATGTTTGGTATTGCAATAGTTCCCTCTGTTCTATTGGCTTTAGGAATGACTGTTTCGCCTGAAAGTCCTAGATGGCTCTTACAGCAAGGAAAAACTTCCCAAGCTGAAAAGGTTATAAAAACATTATACGGAAAAGAGAGAGTAACTGAGGTGATGCATGACTTAACATCAGCAAGTCATGGATCTACTGAACCCGAAGCAGGCTGGTTTGATCTGTTTAGTAGCCGCTATTGGAAAGTTGTTAGTGTTGGTGCGGCACTTTTCTTGTTCCAACAGTTAGCTGGGATAAATGCTGTGGTTTATTATTCCACTTCTGTCTTCCGCAGTGCTGGCATAACATCAGATGTTGCAGCAAGTGCTCTCGTTGGAGCAGCAAATGTCTTTGGCACAGCTGTTGCATCGTCACTGATGGACAGACAAGGAAGGAAAAATCTTCTCCTGATAAGTTTTGGAGGAATGGCTGCTTCAATGTTGCTGCTTGCTTTGTCGTTTACTTGGAGTGTTTTGGCACCATATTCTGGCACCCTTGCTGTTGCTGGGACTGTTCTCTATGTATTGTCCTTTTCGCTTGGTGCTGGCCCTGTGCCCGCTCTTCTTCTGCCAGAGATATTTGCTTCAAGAATCAGAGCAAAAGCAGTTTCTTTGTCATTGGGCATGCACTGGATATCAAACTTCGTCATTGGCCTGTATTTCTTGAGCTTTGTAACCAAGTTCGGGATCAGCTCGGTGTATCTGGGATTCTCTGCTGTTTGTCTGCTTGCTGTCTTGTACATAGCTGGTAATGTCGTTGAAACTAAAGGGCGATCATTGGAGGACATAGAGCGTGCCCTTAGCGTTCCAACCTGA

Protein Analysis

542

Amino Acids

57.02

Weight (kDa)

9.41

Isoelectric Point (pI)

32.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 106 - 536 1.2e-107 Sugar (and other) transporter
MFS_1 PF07690 108 - 451 1.4e-26 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 896
AccB1I GGYRCC 3 cut(s) 452, 1288, 1301
AccB7I CCANNNNNTGG 3 cut(s) 311, 574, 1298
AccBSI CCGCTC 1 cut(s) 1370
AciI CCGC 4 cut(s) 1006, 1034, 1102, 1368
AclI AACGTT 2 cut(s) 14, 411
AclWI GGATC 5 cut(s) 399, 472, 697, 970, 1505
AcsI RAATTY 1 cut(s) 672
AfaI GTAC 2 cut(s) 380, 1550
AfiI CCNNNNNNNGG 7 cut(s) 173, 311, 388, 574, 980, 1298, 1494
AgsI TTSAA 4 cut(s) 205, 1248, 1398, 1571
AjiI CACGTC 1 cut(s) 164
AjnI CCWGG 1 cut(s) 166
Alw21I GWGCWC 5 cut(s) 135, 373, 685, 733, 1141
Alw44I GTGCAC 1 cut(s) 681
AlwI GGATC 5 cut(s) 399, 472, 697, 970, 1505
Ama87I CYCGRG 1 cut(s) 353
AoxI GGCC 4 cut(s) 123, 228, 1357, 1462
ApaLI GTGCAC 1 cut(s) 681
ApeKI GCWGC 5 cut(s) 236, 1130, 1151, 1241, 1255
ApoI RAATTY 1 cut(s) 672
Asp700I GAANNNNTTC 1 cut(s) 874
AspS9I GGNCC 1 cut(s) 1358
AsuHPI GGTGA 2 cut(s) 98, 943
AvaI CYCGRG 1 cut(s) 353
AxyI CCTNAGG 1 cut(s) 276
BaeGI GKGCMC 3 cut(s) 685, 1368, 1609
BanI GGYRCC 3 cut(s) 452, 1288, 1301
BanII GRGCYC 1 cut(s) 226
BbsI GAAGAC 1 cut(s) 1090
Bbv12I GWGCWC 5 cut(s) 135, 373, 685, 733, 1141
BbvI GCAGC 5 cut(s) 223, 1142, 1163, 1228, 1242
BccI CCATC 4 cut(s) 176, 236, 846, 1183
BciT130I CCWGG 1 cut(s) 168
BfaI CTAG 3 cut(s) 446, 507, 849
BfmI CTRYAG 2 cut(s) 237, 561
BglII AGATCT 1 cut(s) 657
BisI GCNGC 7 cut(s) 237, 1006, 1035, 1131, 1152, 1242, 1256
BlsI GCNGC 7 cut(s) 238, 1007, 1036, 1132, 1153, 1243, 1257
Bme1390I CCNGG 1 cut(s) 168
BmeT110I CYCGRG 1 cut(s) 353
BmgBI CACGTC 1 cut(s) 164
BmgT120I GGNCC 1 cut(s) 1358
BmiI GGNNCC 5 cut(s) 151, 331, 454, 1290, 1303
BmrFI CCNGG 1 cut(s) 168
BmsI GCATC 4 cut(s) 514, 630, 924, 1187
BpiI GAAGAC 1 cut(s) 1090
Bpu10I CCTNAGC 2 cut(s) 225, 1610
BpuEI CTTGAG 2 cut(s) 395, 1495
BsaJI CCNNGG 1 cut(s) 724
BsaXI ACNNNNNCTCC 2 cut(s) 720, 750
Bsc4I CCNNNNNNNGG 7 cut(s) 173, 311, 388, 574, 980, 1298, 1494
Bse1I ACTGG 3 cut(s) 478, 738, 1445
Bse21I CCTNAGG 1 cut(s) 276
BseBI CCWGG 1 cut(s) 168
BseDI CCNNGG 1 cut(s) 724
BseLI CCNNNNNNNGG 7 cut(s) 173, 311, 388, 574, 980, 1298, 1494
BseMII CTCAG 5 cut(s) 232, 239, 290, 645, 918
BseNI ACTGG 3 cut(s) 478, 738, 1445
BseSI GKGCMC 3 cut(s) 685, 1368, 1609
BseXI GCAGC 5 cut(s) 223, 1142, 1163, 1228, 1242
BseYI CCCAGC 2 cut(s) 1061, 1316
BshFI GGCC 4 cut(s) 125, 230, 1359, 1464
BshNI GGYRCC 3 cut(s) 452, 1288, 1301
BsiHKAI GWGCWC 5 cut(s) 135, 373, 685, 733, 1141
BsiHKCI CYCGRG 1 cut(s) 353
BslFI GGGAC 3 cut(s) 260, 623, 1333
BslI CCNNNNNNNGG 7 cut(s) 173, 311, 388, 574, 980, 1298, 1494
BsmFI GGGAC 3 cut(s) 260, 623, 1333
BsnI GGCC 4 cut(s) 125, 230, 1359, 1464
BsoBI CYCGRG 1 cut(s) 353
Bsp1286I GDGCHC 8 cut(s) 135, 226, 373, 685, 733, 1141, 1368, 1609
Bsp1407I TGTACA 1 cut(s) 1548
Bsp143I GATC 9 cut(s) 212, 391, 464, 657, 689, 962, 991, 1497, 1583
BspACI CCGC 4 cut(s) 1006, 1034, 1102, 1368
BspANI GGCC 4 cut(s) 125, 230, 1359, 1464
BspCNI CTCAG 5 cut(s) 231, 238, 289, 646, 919
BspLI GGNNCC 5 cut(s) 151, 331, 454, 1290, 1303
BspMAI CTGCAG 1 cut(s) 241
BspPI GGATC 5 cut(s) 399, 472, 697, 970, 1505
BspQI GCTCTTC 1 cut(s) 1377
BspT107I GGYRCC 3 cut(s) 452, 1288, 1301
BsrBI CCGCTC 1 cut(s) 1370
BsrGI TGTACA 1 cut(s) 1548
BsrI ACTGG 3 cut(s) 478, 738, 1445
BssECI CCNNGG 1 cut(s) 724
BssMI GATC 9 cut(s) 212, 391, 464, 657, 689, 962, 991, 1497, 1583
BssT1I CCWWGG 1 cut(s) 724
Bst2UI CCWGG 1 cut(s) 168
Bst4CI ACNGT 6 cut(s) 130, 298, 460, 832, 1056, 1324
Bst6I CTCTTC 1 cut(s) 1377
BstAPI GCANNNNNTGC 1 cut(s) 1136
BstAUI TGTACA 1 cut(s) 1548
BstDEI CTNAG 6 cut(s) 218, 225, 276, 654, 927, 1610
BstENI CCTNNNNNAGG 1 cut(s) 386
BstKTI GATC 9 cut(s) 215, 394, 467, 660, 692, 965, 994, 1500, 1586
BstMBI GATC 9 cut(s) 212, 391, 464, 657, 689, 962, 991, 1497, 1583
BstMWI GCNNNNNNNGC 7 cut(s) 149, 158, 236, 737, 862, 1110, 1136
BstNI CCWGG 1 cut(s) 168
BstNSI RCATGY 1 cut(s) 1438
BstSCI CCNGG 1 cut(s) 166
BstSFI CTRYAG 2 cut(s) 237, 561
BstSLI GKGCMC 3 cut(s) 685, 1368, 1609
BstV1I GCAGC 5 cut(s) 223, 1142, 1163, 1228, 1242
BstV2I GAAGAC 1 cut(s) 1090
BstX2I RGATCY 5 cut(s) 391, 464, 657, 689, 962
BstYI RGATCY 5 cut(s) 391, 464, 657, 689, 962
Bsu36I CCTNAGG 1 cut(s) 276
BsuRI GGCC 4 cut(s) 125, 230, 1359, 1464
BtrI CACGTC 1 cut(s) 164
BtsI GCAGTG 1 cut(s) 1111
BtsIMutI CAGTG 6 cut(s) 126, 471, 731, 1111, 1184, 1438
Cfr13I GGNCC 1 cut(s) 1358
Csp6I GTAC 2 cut(s) 379, 1549
CviAII CATG 6 cut(s) 193, 250, 271, 938, 959, 1435
CviQI GTAC 2 cut(s) 379, 1549
DdeI CTNAG 6 cut(s) 218, 225, 276, 654, 927, 1610
DpnI GATC 9 cut(s) 214, 393, 466, 659, 691, 964, 993, 1499, 1585
DpnII GATC 9 cut(s) 212, 391, 464, 657, 689, 962, 991, 1497, 1583
Eam1104I CTCTTC 1 cut(s) 1377
EarI CTCTTC 1 cut(s) 1377
Eco130I CCWWGG 1 cut(s) 724
Eco147I AGGCCT 1 cut(s) 230
Eco24I GRGCYC 1 cut(s) 226
Eco32I GATATC 1 cut(s) 1446
Eco81I CCTNAGG 1 cut(s) 276
Eco88I CYCGRG 1 cut(s) 353
EcoNI CCTNNNNNAGG 1 cut(s) 386
EcoRII CCWGG 1 cut(s) 166
EcoRV GATATC 1 cut(s) 1446
EcoT14I CCWWGG 1 cut(s) 724
EcoT22I ATGCAT 1 cut(s) 939
EcoT38I GRGCYC 1 cut(s) 226
ErhI CCWWGG 1 cut(s) 724
FaeI CATG 6 cut(s) 196, 253, 274, 941, 962, 1438
FaqI GGGAC 3 cut(s) 260, 623, 1333
FatI CATG 6 cut(s) 192, 249, 270, 937, 958, 1434
FauI CCCGC 1 cut(s) 1375
FauNDI CATATG 1 cut(s) 307
Fnu4HI GCNGC 7 cut(s) 237, 1006, 1035, 1131, 1152, 1242, 1256
FriOI GRGCYC 1 cut(s) 226
Fsp4HI GCNGC 7 cut(s) 237, 1006, 1035, 1131, 1152, 1242, 1256
FspBI CTAG 3 cut(s) 446, 507, 849
GluI GCNGC 7 cut(s) 237, 1006, 1035, 1131, 1152, 1242, 1256
GsaI CCCAGC 2 cut(s) 1065, 1320
HaeIII GGCC 4 cut(s) 125, 230, 1359, 1464
Hin1II CATG 6 cut(s) 196, 253, 274, 941, 962, 1438
HincII GTYRAC 1 cut(s) 12
HindII GTYRAC 1 cut(s) 12
HindIII AAGCTT 1 cut(s) 155
HinfI GANTC 7 cut(s) 171, 256, 529, 615, 720, 1401, 1518
HphI GGTGA 2 cut(s) 98, 943
Hpy166II GTNNAC 4 cut(s) 12, 683, 697, 1272
Hpy188I TCNGA 4 cut(s) 95, 655, 1123, 1406
Hpy188III TCNNGA 6 cut(s) 291, 374, 1219, 1398, 1474, 1495
Hpy8I GTNNAC 4 cut(s) 12, 683, 697, 1272
HpyAV CCTTC 2 cut(s) 63, 1197
HpyCH4III ACNGT 6 cut(s) 130, 298, 460, 832, 1056, 1324
HpyCH4IV ACGT 3 cut(s) 14, 163, 411
HpyCH4V TGCA 9 cut(s) 4, 161, 239, 683, 794, 937, 1130, 1178, 1438
HpyF10VI GCNNNNNNNGC 7 cut(s) 149, 158, 236, 737, 862, 1110, 1136
HpyF3I CTNAG 6 cut(s) 218, 225, 276, 654, 927, 1610
HpySE526I ACGT 3 cut(s) 14, 163, 411
Hsp92II CATG 6 cut(s) 196, 253, 274, 941, 962, 1438
Kzo9I GATC 9 cut(s) 212, 391, 464, 657, 689, 962, 991, 1497, 1583
LguI GCTCTTC 1 cut(s) 1377
LmnI GCTCC 6 cut(s) 149, 329, 545, 577, 728, 1148
Lsp1109I GCAGC 5 cut(s) 223, 1142, 1163, 1228, 1242
LweI GCATC 4 cut(s) 514, 630, 924, 1187
MaeI CTAG 3 cut(s) 446, 507, 849
MaeII ACGT 3 cut(s) 14, 163, 411
MaeIII GTNAC 3 cut(s) 922, 1182, 1483
MalI GATC 9 cut(s) 214, 393, 466, 659, 691, 964, 993, 1499, 1585
MbiI CCGCTC 1 cut(s) 1370
MboI GATC 9 cut(s) 212, 391, 464, 657, 689, 962, 991, 1497, 1583
MboII GAAGA 6 cut(s) 108, 279, 1090, 1205, 1364, 1367
MflI RGATCY 5 cut(s) 391, 464, 657, 689, 962
MhlI GDGCHC 8 cut(s) 135, 226, 373, 685, 733, 1141, 1368, 1609
MluCI AATT 3 cut(s) 588, 609, 672
MmeI TCCRAC 7 cut(s) 82, 394, 442, 541, 689, 1075, 1126
MnlI CCTC 9 cut(s) 241, 276, 285, 671, 768, 814, 922, 1226, 1585
Mph1103I ATGCAT 1 cut(s) 939
MroXI GAANNNNTTC 1 cut(s) 874
MseI TTAA 2 cut(s) 419, 944
MslI CAYNNNNRTG 1 cut(s) 553
MspA1I CMGCKG 1 cut(s) 1172
MspR9I CCNGG 1 cut(s) 168
MvaI CCWGG 1 cut(s) 168
MwoI GCNNNNNNNGC 7 cut(s) 149, 158, 236, 737, 862, 1110, 1136
NdeI CATATG 1 cut(s) 307
NdeII GATC 9 cut(s) 212, 391, 464, 657, 689, 962, 991, 1497, 1583
NlaIII CATG 6 cut(s) 196, 253, 274, 941, 962, 1438
NlaIV GGNNCC 5 cut(s) 151, 331, 454, 1290, 1303
NmuCI GTSAC 1 cut(s) 1182
NsiI ATGCAT 1 cut(s) 939
NspI RCATGY 1 cut(s) 1438
PaeI GCATGC 1 cut(s) 1438
PceI AGGCCT 1 cut(s) 230
PciSI GCTCTTC 1 cut(s) 1377
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PdmI GAANNNNTTC 1 cut(s) 874
PfeI GAWTC 7 cut(s) 171, 256, 529, 615, 720, 1401, 1518
PflMI CCANNNNNTGG 3 cut(s) 311, 574, 1298
PfoI TCCNGGA 1 cut(s) 166
PkrI GCNGC 7 cut(s) 238, 1007, 1036, 1132, 1153, 1243, 1257
PsiI TTATAA 1 cut(s) 896
Psp1406I AACGTT 2 cut(s) 14, 411
Psp6I CCWGG 1 cut(s) 166
PspFI CCCAGC 2 cut(s) 1061, 1316
PspGI CCWGG 1 cut(s) 166
PspN4I GGNNCC 5 cut(s) 151, 331, 454, 1290, 1303
PspPI GGNCC 1 cut(s) 1358
PstI CTGCAG 1 cut(s) 241
PsuI RGATCY 5 cut(s) 391, 464, 657, 689, 962
PvuII CAGCTG 1 cut(s) 1172
RsaI GTAC 2 cut(s) 380, 1550
RsaNI GTAC 2 cut(s) 379, 1549
RseI CAYNNNNRTG 1 cut(s) 553
SapI GCTCTTC 1 cut(s) 1377
SaqAI TTAA 2 cut(s) 419, 944
SatI GCNGC 7 cut(s) 237, 1006, 1035, 1131, 1152, 1242, 1256
Sau3AI GATC 9 cut(s) 212, 391, 464, 657, 689, 962, 991, 1497, 1583
Sau96I GGNCC 1 cut(s) 1358
ScrFI CCNGG 1 cut(s) 168
SduI GDGCHC 8 cut(s) 135, 226, 373, 685, 733, 1141, 1368, 1609
SfaNI GCATC 4 cut(s) 514, 630, 924, 1187
SfcI CTRYAG 2 cut(s) 237, 561
SmiMI CAYNNNNRTG 1 cut(s) 553
SmlI CTYRAG 2 cut(s) 374, 1474
SmoI CTYRAG 2 cut(s) 374, 1474
SphI GCATGC 1 cut(s) 1438
Sse9I AATT 3 cut(s) 588, 609, 672
SseBI AGGCCT 1 cut(s) 230
SsiI CCGC 4 cut(s) 1006, 1034, 1102, 1368
SspMI CTAG 3 cut(s) 446, 507, 849
StuI AGGCCT 1 cut(s) 230
StyD4I CCNGG 1 cut(s) 166
StyI CCWWGG 1 cut(s) 724
TaaI ACNGT 6 cut(s) 130, 298, 460, 832, 1056, 1324
TaiI ACGT 3 cut(s) 17, 166, 414
TaqI TCGA 2 cut(s) 23, 676
TasI AATT 3 cut(s) 588, 609, 672
TatI WGTACW 1 cut(s) 1548
TauI GCSGC 2 cut(s) 1008, 1037
TfiI GAWTC 7 cut(s) 171, 256, 529, 615, 720, 1401, 1518
Tru1I TTAA 2 cut(s) 419, 944
Tru9I TTAA 2 cut(s) 419, 944
TscAI CASTG 6 cut(s) 133, 478, 738, 1111, 1191, 1445
TseFI GTSAC 1 cut(s) 1182
TseI GCWGC 5 cut(s) 236, 1130, 1151, 1241, 1255
Tsp45I GTSAC 1 cut(s) 1182
TspDTI ATGAA 1 cut(s) 209
TspGWI ACGGA 2 cut(s) 753, 924
TspRI CASTG 6 cut(s) 133, 478, 738, 1111, 1191, 1445
Van91I CCANNNNNTGG 3 cut(s) 311, 574, 1298
VneI GTGCAC 1 cut(s) 681
XagI CCTNNNNNAGG 1 cut(s) 386
XapI RAATTY 1 cut(s) 672
XceI RCATGY 1 cut(s) 1438
XcmI CCANNNNNNNNNTGG 1 cut(s) 1058
XmnI GAANNNNTTC 1 cut(s) 874
XspI CTAG 3 cut(s) 446, 507, 849
Zsp2I ATGCAT 1 cut(s) 939
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.