pycom09g17020
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
17454465 .. 17460505
6041 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g17020.3

Sequence Viewer

Length: 1656 bp
ATGCAAGCGTCAACCTATGGTTCAGTAAATGGGAAGTTGGGGTTTGACGTGCAAAACCAAAAAAGGGTATTGGGTTTTGGAGAATTGAGAAACCGAACAAGAACAGGGCGGAGGAATCTGTTTATTGCAGAGAGGAGAACTTGCTGTGGTGGATTGAGCCTCCCTTCCGCGGCACAGGTGACGGGAGCCAAGATTGCAGGTCTTACAATGGGGTCTGATGGAATTTCCGTGACCACTTTGAAAGCCAGATCAGTCCAGGCTCAGGCTTCTGATGGGGACGTTGAGAATCTTATACCCTCCAAGCCTCAGGGCAAGTCTTCTGGAACAGTGTTGCCGTATGTCGGTGTTGCTTGTCTTGGAGCCATTTTGTTTGGTTATCATCTGGGGGTGGTAAATGGTGCTCTTGAGTACCTATCAATTGATCTTGGTATTGCGGAAAATGCGGTATTGCAAGGGTGGGTGGTTAGCACACTTCTAGCAGGTGCCACAGTTGGATCATTAACTGGTCGATCATTGGCTGACAAGTTCGGCAGAACTAAGACTTTTCAACTAAATGCAATTCCGCTAGCAATTGGAGCATTTTTGTGTGCCACAGCCCAGAGTGTGCAAACGATGATAGTTGGCCGCTTACTTGCTGGCATTGGAATTGGCATCACATCTGCTATTGTTCCACTTTATATATCTGAGATCTCTCCAACTGAAATTCGTGGTACCCTTGGATCTATAAATCAGCTTTTTATATGTATTGGGATTCTTGTAGCAATGGTGGCTGGATTACCATTAGCAGCAAATCCCTTATGGTGGAGAACGATGTTTGGTATTGCAGTAGTACCATCTGTTCTTTTGGCATTAGGAATGGTCGTTTCACCAGAAAGTCCAAGATGGCTTTTCCAGCAAGGAAAATTTTCTGAAGCTGAAAAAGCTATAAAAACGCTATTTGGAAAAGAAAGAGTTACCGAGGTCATGGATGACTTGAGATCAGCAACCCAAGGTTCTGTTGAACCTGAAGCGGGCTGGTTTGATTTGTTTAGTAGCCGCTATTGGAAAGTTGTTCGTGTGGGCGTGTCACTTTTCTTCTTACAACAGATGGCTGGGATAAATGCTGCGGTCTATTATTCTACTTCTGTCTTCCGCAGTGCTGGCATTACATCTGACGTTGCAGCAAGTGCTCTGGTTGGAATAGCAAATGTCTTGGGCACAGCTATTGCATCCTCATTGATGGACAAACAGGGCAGGAAAAGTCTTCTACTCGGAAGCTTCGGTGGGATGGCTGCTTCGATGTTGCTGCTTTCATTGTCCTTTACATGGAAGGCCCTGGATCCATATTCTGCCCCCCTTTCTGTCACTGGAACTTTTCTCTATGTGTTGTCCTTTGCACTTGGCGCTGGCCCTGTGCCTGCTCTTCTTCTACCAGAGATTTTTGCTTCAAGAATCAGAGCAAAAGCAGTTTCTTTGTCATTGGGCATGCACTGGATTTCAAACTTCGCCATAGGCCTCTATTTCTTGAGCTTTGTAACTAAGTTTGGAATCGGCAGAGTGTATTTTGGATTCGCTGGCGTCTGTCTTCTGGCTGTCTTGTACATAGCTGGTAATATCGTTGAAACAAAAGGGCGTTCACTGGAGGAAATAGAGCGTGCTCTTAGCGTTGTCACTTGA

Protein Analysis

552

Amino Acids

58.18

Weight (kDa)

9.54

Isoelectric Point (pI)

32.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 470
Acc36I ACCTGC 2 cut(s) 188, 470
Acc65I GGTACC 1 cut(s) 710
AccB1I GGYRCC 2 cut(s) 482, 710
AccII CGCG 1 cut(s) 170
AclWI GGATC 4 cut(s) 502, 727, 1313, 1326
AcoI YGGCCR 1 cut(s) 622
AcsI RAATTY 3 cut(s) 222, 702, 902
AcuI CTGAAG 2 cut(s) 930, 1026
AcyI GRCGYC 1 cut(s) 1557
AfaI GTAC 4 cut(s) 410, 712, 831, 1580
AfiI CCNNNNNNNGG 7 cut(s) 64, 169, 262, 341, 801, 1010, 1305
AgsI TTSAA 6 cut(s) 241, 548, 1001, 1428, 1479, 1601
AjiI CACGTC 1 cut(s) 49
AjnI CCWGG 2 cut(s) 255, 1314
AluBI AGCT 7 cut(s) 733, 914, 923, 1202, 1257, 1509, 1586
AluI AGCT 7 cut(s) 733, 914, 923, 1202, 1257, 1509, 1586
Alw21I GWGCWC 3 cut(s) 403, 1171, 1639
AlwI GGATC 4 cut(s) 502, 727, 1313, 1326
AoxI GGCC 4 cut(s) 622, 1311, 1387, 1492
ApeKI GCWGC 5 cut(s) 785, 1103, 1160, 1271, 1285
ApoI RAATTY 3 cut(s) 222, 702, 902
Asp700I GAANNNNTTC 1 cut(s) 904
Asp718I GGTACC 1 cut(s) 710
AspLEI GCGC 1 cut(s) 1385
AspS9I GGNCC 2 cut(s) 1312, 1388
AsuHPI GGTGA 2 cut(s) 190, 858
AsuNHI GCTAGC 1 cut(s) 565
AxyI CCTNAGG 1 cut(s) 306
BaeGI GKGCMC 1 cut(s) 1199
BamHI GGATCC 1 cut(s) 1318
BanI GGYRCC 2 cut(s) 482, 710
BbsI GAAGAC 4 cut(s) 309, 1120, 1235, 1556
Bbv12I GWGCWC 3 cut(s) 403, 1171, 1639
BbvI GCAGC 5 cut(s) 797, 1090, 1172, 1258, 1272
BccI CCATC 7 cut(s) 212, 266, 841, 876, 1081, 1213, 1261
BceAI ACGGC 1 cut(s) 319
BcgI CGANNNNNNTGC 2 cut(s) 1267, 1301
BciT130I CCWGG 2 cut(s) 257, 1316
BfaI CTAG 2 cut(s) 476, 566
BfoI RGCGCY 1 cut(s) 1386
BfuAI ACCTGC 2 cut(s) 188, 470
BglII AGATCT 1 cut(s) 687
BisI GCNGC 8 cut(s) 171, 625, 786, 1036, 1104, 1161, 1272, 1286
BlsI GCNGC 8 cut(s) 172, 626, 787, 1037, 1105, 1162, 1273, 1287
Bme1390I CCNGG 2 cut(s) 257, 1316
BmgBI CACGTC 1 cut(s) 49
BmgT120I GGNCC 2 cut(s) 1312, 1388
BmiI GGNNCC 5 cut(s) 187, 361, 484, 712, 1320
BmrFI CCNGG 2 cut(s) 257, 1316
BmsI GCATC 2 cut(s) 660, 1217
BmtI GCTAGC 1 cut(s) 569
BpiI GAAGAC 4 cut(s) 309, 1120, 1235, 1556
BpmI CTGGAG 1 cut(s) 1640
Bpu10I CCTNAGC 1 cut(s) 261
BpuEI CTTGAG 3 cut(s) 425, 994, 1525
BsaHI GRCGYC 1 cut(s) 1557
BsaJI CCNNGG 5 cut(s) 168, 715, 957, 988, 1314
Bsc4I CCNNNNNNNGG 7 cut(s) 64, 169, 262, 341, 801, 1010, 1305
Bse1I ACTGG 4 cut(s) 508, 1351, 1475, 1623
Bse21I CCTNAGG 1 cut(s) 306
Bse3DI GCAATG 1 cut(s) 768
BseBI CCWGG 2 cut(s) 257, 1316
BseDI CCNNGG 5 cut(s) 168, 715, 957, 988, 1314
BseGI GGATG 3 cut(s) 973, 1208, 1272
BseLI CCNNNNNNNGG 7 cut(s) 64, 169, 262, 341, 801, 1010, 1305
BseMI GCAATG 1 cut(s) 768
BseMII CTCAG 3 cut(s) 275, 320, 675
BseNI ACTGG 4 cut(s) 508, 1351, 1475, 1623
BseRI GAGGAG 1 cut(s) 148
BseSI GKGCMC 1 cut(s) 1199
BseXI GCAGC 5 cut(s) 797, 1090, 1172, 1258, 1272
BseYI CCCAGC 1 cut(s) 1091
Bsh1236I CGCG 1 cut(s) 170
BshFI GGCC 4 cut(s) 624, 1313, 1389, 1494
BshNI GGYRCC 2 cut(s) 482, 710
BsiHKAI GWGCWC 3 cut(s) 403, 1171, 1639
BslFI GGGAC 1 cut(s) 290
BslI CCNNNNNNNGG 7 cut(s) 64, 169, 262, 341, 801, 1010, 1305
BsmFI GGGAC 1 cut(s) 290
BsnI GGCC 4 cut(s) 624, 1313, 1389, 1494
Bsp1286I GDGCHC 4 cut(s) 403, 1171, 1199, 1639
Bsp1407I TGTACA 1 cut(s) 1578
Bsp143I GATC 8 cut(s) 248, 421, 494, 509, 687, 719, 977, 1318
BspANI GGCC 4 cut(s) 624, 1313, 1389, 1494
BspCNI CTCAG 3 cut(s) 274, 319, 676
BspFNI CGCG 1 cut(s) 170
BspLI GGNNCC 5 cut(s) 187, 361, 484, 712, 1320
BspMI ACCTGC 2 cut(s) 188, 470
BspOI GCTAGC 1 cut(s) 569
BspPI GGATC 4 cut(s) 502, 727, 1313, 1326
BspQI GCTCTTC 1 cut(s) 1407
BspT107I GGYRCC 2 cut(s) 482, 710
BsrDI GCAATG 1 cut(s) 768
BsrGI TGTACA 1 cut(s) 1578
BsrI ACTGG 4 cut(s) 508, 1351, 1475, 1623
BssECI CCNNGG 5 cut(s) 168, 715, 957, 988, 1314
BssMI GATC 8 cut(s) 248, 421, 494, 509, 687, 719, 977, 1318
BssNI GRCGYC 1 cut(s) 1557
BssT1I CCWWGG 2 cut(s) 715, 988
Bst2UI CCWGG 2 cut(s) 257, 1316
Bst4CI ACNGT 2 cut(s) 328, 490
Bst6I CTCTTC 1 cut(s) 1407
BstACI GRCGYC 1 cut(s) 1557
BstAPI GCANNNNNTGC 1 cut(s) 1166
BstAUI TGTACA 1 cut(s) 1578
BstDEI CTNAG 6 cut(s) 261, 306, 537, 684, 1518, 1640
BstDSI CCRYGG 1 cut(s) 168
BstF5I GGATG 3 cut(s) 973, 1208, 1272
BstFNI CGCG 1 cut(s) 170
BstH2I RGCGCY 1 cut(s) 1386
BstHHI GCGC 1 cut(s) 1385
BstKTI GATC 8 cut(s) 251, 424, 497, 512, 690, 722, 980, 1321
BstMBI GATC 8 cut(s) 248, 421, 494, 509, 687, 719, 977, 1318
BstMWI GCNNNNNNNGC 9 cut(s) 194, 440, 575, 767, 892, 920, 1140, 1166, 1382
BstNI CCWGG 2 cut(s) 257, 1316
BstNSI RCATGY 1 cut(s) 1468
BstSCI CCNGG 2 cut(s) 255, 1314
BstSLI GKGCMC 1 cut(s) 1199
BstUI CGCG 1 cut(s) 170
BstV1I GCAGC 5 cut(s) 797, 1090, 1172, 1258, 1272
BstV2I GAAGAC 4 cut(s) 309, 1120, 1235, 1556
BstX2I RGATCY 3 cut(s) 687, 719, 1318
BstYI RGATCY 3 cut(s) 687, 719, 1318
Bsu36I CCTNAGG 1 cut(s) 306
BsuRI GGCC 4 cut(s) 624, 1313, 1389, 1494
BtgI CCRYGG 1 cut(s) 168
BtrI CACGTC 1 cut(s) 49
BtsCI GGATG 3 cut(s) 973, 1208, 1272
BtsI GCAGTG 1 cut(s) 1141
BtsIMutI CAGTG 5 cut(s) 333, 1141, 1344, 1468, 1616
BveI ACCTGC 2 cut(s) 188, 470
CfoI GCGC 1 cut(s) 1385
Cfr13I GGNCC 2 cut(s) 1312, 1388
Cfr42I CCGCGG 1 cut(s) 171
CseI GACGC 1 cut(s) 1546
Csp6I GTAC 4 cut(s) 409, 711, 830, 1579
CviAII CATG 3 cut(s) 964, 1305, 1465
CviQI GTAC 4 cut(s) 409, 711, 830, 1579
DdeI CTNAG 6 cut(s) 261, 306, 537, 684, 1518, 1640
DpnI GATC 8 cut(s) 250, 423, 496, 511, 689, 721, 979, 1320
DpnII GATC 8 cut(s) 248, 421, 494, 509, 687, 719, 977, 1318
EaeI YGGCCR 1 cut(s) 622
Eam1104I CTCTTC 1 cut(s) 1407
EarI CTCTTC 1 cut(s) 1407
EciI GGCGGA 1 cut(s) 124
Eco130I CCWWGG 2 cut(s) 715, 988
Eco147I AGGCCT 1 cut(s) 1494
Eco57I CTGAAG 2 cut(s) 930, 1026
Eco81I CCTNAGG 1 cut(s) 306
EcoO109I RGGNCCY 1 cut(s) 1312
EcoRII CCWGG 2 cut(s) 255, 1314
EcoT14I CCWWGG 2 cut(s) 715, 988
ErhI CCWWGG 2 cut(s) 715, 988
FaeI CATG 3 cut(s) 967, 1308, 1468
FaqI GGGAC 1 cut(s) 290
FatI CATG 3 cut(s) 963, 1304, 1464
FauI CCCGC 1 cut(s) 1003
Fnu4HI GCNGC 8 cut(s) 171, 625, 786, 1036, 1104, 1161, 1272, 1286
FokI GGATG 3 cut(s) 980, 1195, 1279
Fsp4HI GCNGC 8 cut(s) 171, 625, 786, 1036, 1104, 1161, 1272, 1286
FspBI CTAG 2 cut(s) 476, 566
GlaI GCGC 1 cut(s) 1384
GluI GCNGC 8 cut(s) 171, 625, 786, 1036, 1104, 1161, 1272, 1286
GsaI CCCAGC 1 cut(s) 1095
GsuI CTGGAG 1 cut(s) 1640
HaeII RGCGCY 1 cut(s) 1386
HaeIII GGCC 4 cut(s) 624, 1313, 1389, 1494
HgaI GACGC 1 cut(s) 1546
HhaI GCGC 1 cut(s) 1385
Hin1I GRCGYC 1 cut(s) 1557
Hin1II CATG 3 cut(s) 967, 1308, 1468
Hin6I GCGC 1 cut(s) 1383
HinP1I GCGC 1 cut(s) 1383
HincII GTYRAC 1 cut(s) 12
HindII GTYRAC 1 cut(s) 12
HindIII AAGCTT 1 cut(s) 1255
HinfI GANTC 6 cut(s) 115, 286, 751, 1431, 1527, 1548
HphI GGTGA 2 cut(s) 190, 858
Hpy166II GTNNAC 2 cut(s) 12, 1616
Hpy188I TCNGA 7 cut(s) 217, 271, 685, 910, 1153, 1253, 1436
Hpy188III TCNNGA 4 cut(s) 321, 404, 1428, 1504
Hpy8I GTNNAC 2 cut(s) 12, 1616
HpyAV CCTTC 2 cut(s) 174, 1303
HpyCH4III ACNGT 2 cut(s) 328, 490
HpyCH4IV ACGT 3 cut(s) 48, 279, 1155
HpyF10VI GCNNNNNNNGC 9 cut(s) 194, 440, 575, 767, 892, 920, 1140, 1166, 1382
HpyF3I CTNAG 6 cut(s) 261, 306, 537, 684, 1518, 1640
HpySE526I ACGT 3 cut(s) 48, 279, 1155
Hsp92I GRCGYC 1 cut(s) 1557
Hsp92II CATG 3 cut(s) 967, 1308, 1468
HspAI GCGC 1 cut(s) 1383
KpnI GGTACC 1 cut(s) 714
KspI CCGCGG 1 cut(s) 171
Kzo9I GATC 8 cut(s) 248, 421, 494, 509, 687, 719, 977, 1318
LguI GCTCTTC 1 cut(s) 1407
LmnI GCTCC 3 cut(s) 185, 359, 575
Lsp1109I GCAGC 5 cut(s) 797, 1090, 1172, 1258, 1272
LweI GCATC 2 cut(s) 660, 1217
MaeI CTAG 2 cut(s) 476, 566
MaeII ACGT 3 cut(s) 48, 279, 1155
MaeIII GTNAC 7 cut(s) 178, 229, 952, 1065, 1342, 1513, 1648
MalI GATC 8 cut(s) 250, 423, 496, 511, 689, 721, 979, 1320
MboI GATC 8 cut(s) 248, 421, 494, 509, 687, 719, 977, 1318
MboII GAAGA 7 cut(s) 309, 1066, 1120, 1235, 1394, 1397, 1556
MfeI CAATTG 2 cut(s) 417, 570
MflI RGATCY 3 cut(s) 687, 719, 1318
MhlI GDGCHC 4 cut(s) 403, 1171, 1199, 1639
MluCI AATT 8 cut(s) 83, 222, 417, 558, 570, 645, 702, 902
MmeI TCCRAC 3 cut(s) 472, 719, 1156
MnlI CCTC 9 cut(s) 105, 126, 170, 307, 315, 952, 1222, 1505, 1615
MroXI GAANNNNTTC 1 cut(s) 904
MseI TTAA 1 cut(s) 500
MslI CAYNNNNRTG 1 cut(s) 583
MspA1I CMGCKG 1 cut(s) 170
MspR9I CCNGG 2 cut(s) 257, 1316
MunI CAATTG 2 cut(s) 417, 570
MvaI CCWGG 2 cut(s) 257, 1316
MvnI CGCG 1 cut(s) 170
MwoI GCNNNNNNNGC 9 cut(s) 194, 440, 575, 767, 892, 920, 1140, 1166, 1382
NdeII GATC 8 cut(s) 248, 421, 494, 509, 687, 719, 977, 1318
NheI GCTAGC 1 cut(s) 565
NlaIII CATG 3 cut(s) 967, 1308, 1468
NlaIV GGNNCC 5 cut(s) 187, 361, 484, 712, 1320
NmuCI GTSAC 5 cut(s) 178, 229, 1065, 1342, 1648
NspI RCATGY 1 cut(s) 1468
PaeI GCATGC 1 cut(s) 1468
PaqCI CACCTGC 1 cut(s) 470
PceI AGGCCT 1 cut(s) 1494
PciSI GCTCTTC 1 cut(s) 1407
PdmI GAANNNNTTC 1 cut(s) 904
PfeI GAWTC 6 cut(s) 115, 286, 751, 1431, 1527, 1548
PkrI GCNGC 8 cut(s) 172, 626, 787, 1037, 1105, 1162, 1273, 1287
Psp6I CCWGG 2 cut(s) 255, 1314
PspFI CCCAGC 1 cut(s) 1091
PspGI CCWGG 2 cut(s) 255, 1314
PspN4I GGNNCC 5 cut(s) 187, 361, 484, 712, 1320
PspPI GGNCC 2 cut(s) 1312, 1388
PsrI GAACNNNNNNTAC 2 cut(s) 822, 854
PsuI RGATCY 3 cut(s) 687, 719, 1318
RsaI GTAC 4 cut(s) 410, 712, 831, 1580
RsaNI GTAC 4 cut(s) 409, 711, 830, 1579
RseI CAYNNNNRTG 1 cut(s) 583
SacII CCGCGG 1 cut(s) 171
SapI GCTCTTC 1 cut(s) 1407
SaqAI TTAA 1 cut(s) 500
SatI GCNGC 8 cut(s) 171, 625, 786, 1036, 1104, 1161, 1272, 1286
Sau3AI GATC 8 cut(s) 248, 421, 494, 509, 687, 719, 977, 1318
Sau96I GGNCC 2 cut(s) 1312, 1388
ScrFI CCNGG 2 cut(s) 257, 1316
SduI GDGCHC 4 cut(s) 403, 1171, 1199, 1639
SfaNI GCATC 2 cut(s) 660, 1217
Sfr303I CCGCGG 1 cut(s) 171
SgrBI CCGCGG 1 cut(s) 171
SmiMI CAYNNNNRTG 1 cut(s) 583
SmlI CTYRAG 3 cut(s) 404, 973, 1504
SmoI CTYRAG 3 cut(s) 404, 973, 1504
SphI GCATGC 1 cut(s) 1468
Sse9I AATT 8 cut(s) 83, 222, 417, 558, 570, 645, 702, 902
SseBI AGGCCT 1 cut(s) 1494
SspMI CTAG 2 cut(s) 476, 566
StuI AGGCCT 1 cut(s) 1494
StyD4I CCNGG 2 cut(s) 255, 1314
StyI CCWWGG 2 cut(s) 715, 988
TaaI ACNGT 2 cut(s) 328, 490
TaiI ACGT 3 cut(s) 51, 282, 1158
TaqI TCGA 2 cut(s) 508, 1277
TasI AATT 8 cut(s) 83, 222, 417, 558, 570, 645, 702, 902
TatI WGTACW 1 cut(s) 1578
TauI GCSGC 3 cut(s) 173, 627, 1038
TfiI GAWTC 6 cut(s) 115, 286, 751, 1431, 1527, 1548
Tru1I TTAA 1 cut(s) 500
Tru9I TTAA 1 cut(s) 500
TscAI CASTG 5 cut(s) 333, 1141, 1351, 1475, 1623
TseFI GTSAC 5 cut(s) 178, 229, 1065, 1342, 1648
TseI GCWGC 5 cut(s) 785, 1103, 1160, 1271, 1285
Tsp45I GTSAC 5 cut(s) 178, 229, 1065, 1342, 1648
TspDTI ATGAA 1 cut(s) 1281
TspGWI ACGGA 1 cut(s) 217
TspRI CASTG 5 cut(s) 333, 1141, 1351, 1475, 1623
XapI RAATTY 3 cut(s) 222, 702, 902
XceI RCATGY 1 cut(s) 1468
XmnI GAANNNNTTC 1 cut(s) 904
XspI CTAG 2 cut(s) 476, 566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.