Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0007158

Physical Location & Seq

Genomic Coordinates Reverse (-)

18826857 .. 18833641

Gene Structure 6785 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00397150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGTTGCGAACTCGTGGCGACTTCAACTTTTCATTTCCAACCTCGAAAATAAAATTTGAGCGACTTGAAAATTCAGGATCTCACAGCTACTATGAGTGTACCGTCGACGATGTTGTAGAAGCTGTGAGAACTCGTTTAGGGTTGTTGTCACATTGCTTGATTGGATTGGGCCCCACTTTTTGGATGGCCTTTAGTTTGAACGACAGTTTGAAGGAAAACACACCACTCAATTTTGAATTTTCCAATAATCATTCAGCCCAGGTCAAACAGCAAAGGAAGGTGTTGGGGTCAAGTACAGGGTTAAAGAATCTGTGTATGACAGATAAGGCCACTGGCTTTGGTGGATTGAAGCTCACTTCCGCGGCTATGGGAGCCAACCTTGGACGTCTTGATGGGATTTCCATGACTTCCTTGAAACCCAGATCAGTCAAGGCTCACGCTGCTTCTGGTGCAGATGGAGACGTCGAGAATCTTGTTCCTTCCAAGCCTCAGGTCAAATCTTCTGGAATAGTGTTGCCATTTGTTGGTGTTGCCTGTCTTGGAGCCATTTTATTTGGTTATCATCTCGGGGTGGTAAATGGTTCTCTTGAGTACCTGTCGAAGGATCTTGGGTGGGTGGTTAGCACACTTCTAGCTGGTGCCACAGTTGGATCTTTCACTGGTGGAACATTGGCTGACAAGTTTGGGAGAAGTAGAACTTTTCAACTTGATGCAATTCCACTAACGATTGGAGCATTTTTATGGTGGAGGACAATGTTTGGTATTGCAATAGTTCCCTCTGTTCTATTGGCTTTAGGAATGGCTGTTTCACCTGAAAGTCCTAGATGGCTCTTACAGCAAGGAAAAACTTCTCAGGCTGAAAAGGTTATAAAAACATTATACGGAAAAGAGAGAGTAACTGAGGTGATGCATGACTTAACATCAACAAGTCATGGATCTGCTGAACCCGAAGCAGGCTGGTTTGATCTGTTTAGTAGCCGCTATCGGAAAGTTGTTAGTGTTGGTGCGGCACTTTTCTTGTTCCAACAGTTAGCTGGGATAAATGCTGTGGTTTATTATTCCACTTCTGTCTTCCGCAGTGCTGGCATAACATCAGATGTTGCAGCAAGTGCTCTCGTTGGAGCAGCAAATGTCTTTGGCACAGCTGTTGCATCATCACTGATGGACAGACAAGGAAGGAAAAGTCTTCTCCTCATTAGTTTTGGAGGAATGGCTGCTTCAATGTTGCTGCTTGCTTTGTCTTTCACTTGGAGTGTTTTGGCTCCATATTCTGGCACCCTGGCTGTCGCTGGGACTGTTCTCTATGTATTGTCCTTTTCACTTGGCGCGCTGGTCCTGTGCCTGCTCTTCTTCTGCCAGAGATATTTGCTTCAAGAATCAGAGCAAAAGCAGTTTCTTTGTCATTGGGCATGCACTGGAAAGAACTCTACTGCAAAGGCTGCATTCGGTTATATATCAAACTTCGTCATAGGCCTGTATTTCTTGAGCTTTGTAACCAAGTTCGGGATCAGCTCAGTGTATCTGGGATTCTCGGCTGTTTGTCTGCTTGCGGTCTTGTACATAGCTGGTAATGTTGTTGAAACTAAAGGGCGATCTTTGGAGGACATAGAGCGTGCCCTTAGCGTTCCAACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0022804 GO:0022857 GO:0022890 GO:0031967 GO:0031975 GO:0034219 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046323 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098655 GO:0098660 GO:0098662 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

544

Amino Acids

58.32

Weight (kDa)

9.13

Isoelectric Point (pI)

28.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	243 - 455	4.5e-09	Major Facilitator Superfamily
Sugar_tr	PF00083	249 - 539	2.2e-50	Sugar (and other) transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16150 AT5G16150 AT5G16150
fragaria_vesca	FvH4_1g25970 FvH4_1g25970 FvH4_1g25970
malus_domestica	MD09G1254500.v1.1 MD17G1246900.v1.1
prunus_persica	Prupe.3G144600_v2.0.a1
pyrus_communis	pycom09g17020 pycom17g24850
rosa_chinensis	RchiOBHm_Chr3g0485241
rosa_laevigata	RLG00000023163
rosa_multiflora	Rmu_sc0005072.1_g000021 Rmu_sc0024791.1_g000001 Rmu_sc0038513.1_g000001
rosa_roxburghii	Rroxscaffold_6G00397150
rosa_rugosa	Rorug03G0217000 Rorug03G0217100
rosa_samantha	Rh3AG266500 Rh3BG302200 Rh3CG300200 Rh3DG296400
rosa_wichuraiana	Rw0G000470 Rw3G023760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	869
AatII	GACGTC	2 cut(s)	388, 465
AccB1I	GGYRCC	2 cut(s)	638, 1274
AccB7I	CCANNNNNTGG	3 cut(s)	180, 524, 1271
AccI	GTMKAC	1 cut(s)	105
AccII	CGCG	2 cut(s)	362, 1328
AciI	CCGC	6 cut(s)	360, 362, 979, 1007, 1075, 1550
AclWI	GGATC	5 cut(s)	85, 612, 658, 943, 1514
AcsI	RAATTY	3 cut(s)	53, 70, 236
AcyI	GRCGYC	2 cut(s)	385, 462
AfaI	GTAC	4 cut(s)	100, 295, 593, 1559
AfiI	CCNNNNNNNGG	6 cut(s)	180, 524, 601, 953, 1271, 1503
AjnI	CCWGG	2 cut(s)	258, 1278
AluBI	AGCT	9 cut(s)	87, 122, 352, 635, 1034, 1145, 1488, 1512, 1565
AluI	AGCT	9 cut(s)	87, 122, 352, 635, 1034, 1145, 1488, 1512, 1565
Alw21I	GWGCWC	1 cut(s)	1114
Alw26I	GTCTC	1 cut(s)	453
AlwI	GGATC	5 cut(s)	85, 612, 658, 943, 1514
Ama87I	CYCGRG	1 cut(s)	566
AoxI	GGCC	4 cut(s)	169, 186, 327, 1471
ApaI	GGGCCC	1 cut(s)	173
ApeKI	GCWGC	6 cut(s)	440, 1103, 1124, 1214, 1228, 1439
ApoI	RAATTY	3 cut(s)	53, 70, 236
Asp700I	GAANNNNTTC	1 cut(s)	847
AspLEI	GCGC	2 cut(s)	1328, 1330
AspS9I	GGNCC	3 cut(s)	169, 170, 1333
AsuHPI	GGTGA	2 cut(s)	801, 916
AvaI	CYCGRG	1 cut(s)	566
AvaII	GGWCC	1 cut(s)	1333
AxyI	CCTNAGG	1 cut(s)	489
BaeGI	GKGCMC	2 cut(s)	173, 1618
BanI	GGYRCC	2 cut(s)	638, 1274
BanII	GRGCYC	1 cut(s)	173
BauI	CACGAG	1 cut(s)	12
BbsI	GAAGAC	2 cut(s)	1063, 1178
Bbv12I	GWGCWC	1 cut(s)	1114
BbvI	GCAGC	6 cut(s)	427, 1115, 1136, 1201, 1215, 1426
BccI	CCATC	5 cut(s)	178, 386, 449, 819, 1156
BciT130I	CCWGG	2 cut(s)	260, 1280
BcoDI	GTCTC	1 cut(s)	453
BfaI	CTAG	2 cut(s)	632, 822
BisI	GCNGC	9 cut(s)	363, 441, 979, 1008, 1104, 1125, 1215, 1229, 1440
BlsI	GCNGC	9 cut(s)	364, 442, 980, 1009, 1105, 1126, 1216, 1230, 1441
Bme1390I	CCNGG	2 cut(s)	260, 1280
Bme18I	GGWCC	1 cut(s)	1333
BmeT110I	CYCGRG	1 cut(s)	566
BmgT120I	GGNCC	3 cut(s)	169, 170, 1333
BmiI	GGNNCC	7 cut(s)	171, 172, 373, 544, 640, 1263, 1276
BmrFI	CCNGG	2 cut(s)	260, 1280
BmsI	GCATC	3 cut(s)	700, 897, 1160
BpiI	GAAGAC	2 cut(s)	1063, 1178
Bpu10I	CCTNAGC	1 cut(s)	1619
BpuEI	CTTGAG	2 cut(s)	608, 1504
BsaHI	GRCGYC	2 cut(s)	385, 462
BsaJI	CCNNGG	4 cut(s)	258, 360, 379, 1278
Bsc4I	CCNNNNNNNGG	6 cut(s)	180, 524, 601, 953, 1271, 1503
Bse1I	ACTGG	3 cut(s)	337, 664, 1420
Bse21I	CCTNAGG	1 cut(s)	489
Bse3DI	GCAATG	1 cut(s)	151
BseBI	CCWGG	2 cut(s)	260, 1280
BseDI	CCNNGG	4 cut(s)	258, 360, 379, 1278
BseGI	GGATG	1 cut(s)	189
BseLI	CCNNNNNNNGG	6 cut(s)	180, 524, 601, 953, 1271, 1503
BseMI	GCAATG	1 cut(s)	151
BseMII	CTCAG	4 cut(s)	503, 866, 891, 1527
BseNI	ACTGG	3 cut(s)	337, 664, 1420
BsePI	GCGCGC	1 cut(s)	1326
BseRI	GAGGAG	1 cut(s)	1181
BseSI	GKGCMC	2 cut(s)	173, 1618
BseXI	GCAGC	6 cut(s)	427, 1115, 1136, 1201, 1215, 1426
BseYI	CCCAGC	2 cut(s)	1034, 1289
BsgI	GTGCAG	1 cut(s)	471
Bsh1236I	CGCG	2 cut(s)	362, 1328
BshFI	GGCC	4 cut(s)	171, 188, 329, 1473
BshNI	GGYRCC	2 cut(s)	638, 1274
BsiHKAI	GWGCWC	1 cut(s)	1114
BsiHKCI	CYCGRG	1 cut(s)	566
BslFI	GGGAC	1 cut(s)	1306
BslI	CCNNNNNNNGG	6 cut(s)	180, 524, 601, 953, 1271, 1503
BsmAI	GTCTC	1 cut(s)	453
BsmBI	CGTCTC	1 cut(s)	453
BsmFI	GGGAC	1 cut(s)	1306
BsmI	GAATGC	1 cut(s)	1442
BsnI	GGCC	4 cut(s)	171, 188, 329, 1473
BsoBI	CYCGRG	1 cut(s)	566
Bsp120I	GGGCCC	1 cut(s)	169
Bsp1286I	GDGCHC	3 cut(s)	173, 1114, 1618
Bsp1407I	TGTACA	1 cut(s)	1557
Bsp143I	GATC	8 cut(s)	77, 422, 604, 650, 935, 964, 1506, 1592
BspACI	CCGC	6 cut(s)	360, 362, 979, 1007, 1075, 1550
BspANI	GGCC	4 cut(s)	171, 188, 329, 1473
BspCNI	CTCAG	4 cut(s)	502, 865, 892, 1526
BspFNI	CGCG	2 cut(s)	362, 1328
BspLI	GGNNCC	7 cut(s)	171, 172, 373, 544, 640, 1263, 1276
BspPI	GGATC	5 cut(s)	85, 612, 658, 943, 1514
BspQI	GCTCTTC	1 cut(s)	1352
BspT107I	GGYRCC	2 cut(s)	638, 1274
BsrDI	GCAATG	1 cut(s)	151
BsrGI	TGTACA	1 cut(s)	1557
BsrI	ACTGG	3 cut(s)	337, 664, 1420
BssECI	CCNNGG	4 cut(s)	258, 360, 379, 1278
BssHII	GCGCGC	1 cut(s)	1326
BssMI	GATC	8 cut(s)	77, 422, 604, 650, 935, 964, 1506, 1592
BssNI	GRCGYC	2 cut(s)	385, 462
BssSI	CACGAG	1 cut(s)	12
BssT1I	CCWWGG	1 cut(s)	379
Bst2BI	CACGAG	1 cut(s)	12
Bst2UI	CCWGG	2 cut(s)	260, 1280
Bst4CI	ACNGT	5 cut(s)	103, 206, 646, 1029, 1297
Bst6I	CTCTTC	1 cut(s)	1352
BstACI	GRCGYC	2 cut(s)	385, 462
BstAPI	GCANNNNNTGC	2 cut(s)	1109, 1439
BstAUI	TGTACA	1 cut(s)	1557
BstC8I	GCNNGC	8 cut(s)	955, 1084, 1233, 1328, 1343, 1411, 1548, 1614
BstDEI	CTNAG	5 cut(s)	489, 852, 900, 1513, 1619
BstDSI	CCRYGG	1 cut(s)	360
BstENI	CCTNNNNNAGG	1 cut(s)	599
BstF5I	GGATG	1 cut(s)	189
BstFNI	CGCG	2 cut(s)	362, 1328
BstHHI	GCGC	2 cut(s)	1328, 1330
BstKTI	GATC	8 cut(s)	80, 425, 607, 653, 938, 967, 1509, 1595
BstMAI	GTCTC	1 cut(s)	453
BstMBI	GATC	8 cut(s)	77, 422, 604, 650, 935, 964, 1506, 1592
BstMWI	GCNNNNNNNGC	7 cut(s)	371, 440, 449, 835, 1083, 1109, 1439
BstNI	CCWGG	2 cut(s)	260, 1280
BstNSI	RCATGY	1 cut(s)	1413
BstSCI	CCNGG	2 cut(s)	258, 1278
BstSLI	GKGCMC	2 cut(s)	173, 1618
BstUI	CGCG	2 cut(s)	362, 1328
BstV1I	GCAGC	6 cut(s)	427, 1115, 1136, 1201, 1215, 1426
BstV2I	GAAGAC	2 cut(s)	1063, 1178
BstX2I	RGATCY	4 cut(s)	77, 604, 650, 935
BstYI	RGATCY	4 cut(s)	77, 604, 650, 935
Bsu36I	CCTNAGG	1 cut(s)	489
BsuRI	GGCC	4 cut(s)	171, 188, 329, 1473
BtgI	CCRYGG	1 cut(s)	360
BtsCI	GGATG	1 cut(s)	189
BtsI	GCAGTG	1 cut(s)	1084
BtsIMutI	CAGTG	6 cut(s)	330, 657, 1084, 1157, 1413, 1521
Cac8I	GCNNGC	8 cut(s)	955, 1084, 1233, 1328, 1343, 1411, 1548, 1614
CfoI	GCGC	2 cut(s)	1328, 1330
Cfr13I	GGNCC	3 cut(s)	169, 170, 1333
Cfr42I	CCGCGG	1 cut(s)	363
Csp6I	GTAC	4 cut(s)	99, 294, 592, 1558
CspCI	CAANNNNNGTGG	2 cut(s)	319, 354
CviAII	CATG	4 cut(s)	403, 911, 932, 1410
CviQI	GTAC	4 cut(s)	99, 294, 592, 1558
DdeI	CTNAG	5 cut(s)	489, 852, 900, 1513, 1619
DpnI	GATC	8 cut(s)	79, 424, 606, 652, 937, 966, 1508, 1594
DpnII	GATC	8 cut(s)	77, 422, 604, 650, 935, 964, 1506, 1592
Eam1104I	CTCTTC	1 cut(s)	1352
EarI	CTCTTC	1 cut(s)	1352
Eco130I	CCWWGG	1 cut(s)	379
Eco147I	AGGCCT	1 cut(s)	1473
Eco24I	GRGCYC	1 cut(s)	173
Eco47I	GGWCC	1 cut(s)	1333
Eco81I	CCTNAGG	1 cut(s)	489
Eco88I	CYCGRG	1 cut(s)	566
EcoNI	CCTNNNNNAGG	1 cut(s)	599
EcoO109I	RGGNCCY	1 cut(s)	170
EcoRII	CCWGG	2 cut(s)	258, 1278
EcoT14I	CCWWGG	1 cut(s)	379
EcoT22I	ATGCAT	1 cut(s)	912
EcoT38I	GRGCYC	1 cut(s)	173
ErhI	CCWWGG	1 cut(s)	379
Esp3I	CGTCTC	1 cut(s)	453
FaeI	CATG	4 cut(s)	406, 914, 935, 1413
FalI	AAGNNNNNCTT	2 cut(s)	682, 714
FaqI	GGGAC	1 cut(s)	1306
FatI	CATG	4 cut(s)	402, 910, 931, 1409
FblI	GTMKAC	1 cut(s)	105
Fnu4HI	GCNGC	9 cut(s)	363, 441, 979, 1008, 1104, 1125, 1215, 1229, 1440
FokI	GGATG	1 cut(s)	196
FriOI	GRGCYC	1 cut(s)	173
Fsp4HI	GCNGC	9 cut(s)	363, 441, 979, 1008, 1104, 1125, 1215, 1229, 1440
FspBI	CTAG	2 cut(s)	632, 822
GlaI	GCGC	2 cut(s)	1327, 1329
GluI	GCNGC	9 cut(s)	363, 441, 979, 1008, 1104, 1125, 1215, 1229, 1440
GsaI	CCCAGC	2 cut(s)	1038, 1293
HaeIII	GGCC	4 cut(s)	171, 188, 329, 1473
HhaI	GCGC	2 cut(s)	1328, 1330
Hin1I	GRCGYC	2 cut(s)	385, 462
Hin1II	CATG	4 cut(s)	406, 914, 935, 1413
Hin6I	GCGC	2 cut(s)	1326, 1328
HinP1I	GCGC	2 cut(s)	1326, 1328
HincII	GTYRAC	1 cut(s)	106
HindII	GTYRAC	1 cut(s)	106
HinfI	GANTC	4 cut(s)	307, 469, 1376, 1527
HphI	GGTGA	2 cut(s)	801, 916
Hpy166II	GTNNAC	2 cut(s)	99, 106
Hpy188I	TCNGA	3 cut(s)	987, 1096, 1381
Hpy188III	TCNNGA	8 cut(s)	75, 389, 466, 504, 587, 1373, 1483, 1504
Hpy8I	GTNNAC	2 cut(s)	99, 106
Hpy99I	CGWCG	3 cut(s)	107, 110, 467
HpyAV	CCTTC	5 cut(s)	205, 271, 489, 595, 1170
HpyCH4III	ACNGT	5 cut(s)	103, 206, 646, 1029, 1297
HpyCH4IV	ACGT	2 cut(s)	385, 462
HpyCH4V	TGCA	9 cut(s)	452, 713, 767, 910, 1103, 1151, 1413, 1433, 1442
HpyF10VI	GCNNNNNNNGC	7 cut(s)	371, 440, 449, 835, 1083, 1109, 1439
HpyF3I	CTNAG	5 cut(s)	489, 852, 900, 1513, 1619
HpySE526I	ACGT	2 cut(s)	385, 462
Hsp92I	GRCGYC	2 cut(s)	385, 462
Hsp92II	CATG	4 cut(s)	406, 914, 935, 1413
HspAI	GCGC	2 cut(s)	1326, 1328
KspI	CCGCGG	1 cut(s)	363
Kzo9I	GATC	8 cut(s)	77, 422, 604, 650, 935, 964, 1506, 1592
LguI	GCTCTTC	1 cut(s)	1352
LmnI	GCTCC	5 cut(s)	371, 542, 731, 1121, 1267
Lsp1109I	GCAGC	6 cut(s)	427, 1115, 1136, 1201, 1215, 1426
LweI	GCATC	3 cut(s)	700, 897, 1160
MaeI	CTAG	2 cut(s)	632, 822
MaeII	ACGT	2 cut(s)	385, 462
MaeIII	GTNAC	3 cut(s)	147, 895, 1492
MalI	GATC	8 cut(s)	79, 424, 606, 652, 937, 966, 1508, 1594
MboI	GATC	8 cut(s)	77, 422, 604, 650, 935, 964, 1506, 1592
MboII	GAAGA	5 cut(s)	492, 1063, 1178, 1339, 1342
MflI	RGATCY	4 cut(s)	77, 604, 650, 935
MhlI	GDGCHC	3 cut(s)	173, 1114, 1618
MluCI	AATT	5 cut(s)	53, 70, 229, 236, 714
MmeI	TCCRAC	4 cut(s)	62, 628, 1048, 1099
MnlI	CCTC	8 cut(s)	52, 498, 741, 787, 895, 1199, 1202, 1594
Mph1103I	ATGCAT	1 cut(s)	912
MroXI	GAANNNNTTC	1 cut(s)	847
MseI	TTAA	2 cut(s)	302, 917
MslI	CAYNNNNRTG	1 cut(s)	739
MspA1I	CMGCKG	2 cut(s)	362, 1145
MspR9I	CCNGG	2 cut(s)	260, 1280
Mva1269I	GAATGC	1 cut(s)	1442
MvaI	CCWGG	2 cut(s)	260, 1280
MvnI	CGCG	2 cut(s)	362, 1328
MwoI	GCNNNNNNNGC	7 cut(s)	371, 440, 449, 835, 1083, 1109, 1439
NdeII	GATC	8 cut(s)	77, 422, 604, 650, 935, 964, 1506, 1592
NlaIII	CATG	4 cut(s)	406, 914, 935, 1413
NlaIV	GGNNCC	7 cut(s)	171, 172, 373, 544, 640, 1263, 1276
NmeAIII	GCCGAG	1 cut(s)	1511
NmuCI	GTSAC	1 cut(s)	147
NsiI	ATGCAT	1 cut(s)	912
NspI	RCATGY	1 cut(s)	1413
PaeI	GCATGC	1 cut(s)	1413
PauI	GCGCGC	1 cut(s)	1326
PceI	AGGCCT	1 cut(s)	1473
PciSI	GCTCTTC	1 cut(s)	1352
PctI	GAATGC	1 cut(s)	1442
PdmI	GAANNNNTTC	1 cut(s)	847
PfeI	GAWTC	4 cut(s)	307, 469, 1376, 1527
PflMI	CCANNNNNTGG	3 cut(s)	180, 524, 1271
PkrI	GCNGC	9 cut(s)	364, 442, 980, 1009, 1105, 1126, 1216, 1230, 1441
PsiI	TTATAA	1 cut(s)	869
Psp6I	CCWGG	2 cut(s)	258, 1278
PspFI	CCCAGC	2 cut(s)	1034, 1289
PspGI	CCWGG	2 cut(s)	258, 1278
PspN4I	GGNNCC	7 cut(s)	171, 172, 373, 544, 640, 1263, 1276
PspOMI	GGGCCC	1 cut(s)	169
PspPI	GGNCC	3 cut(s)	169, 170, 1333
PsuI	RGATCY	4 cut(s)	77, 604, 650, 935
PteI	GCGCGC	1 cut(s)	1326
PvuII	CAGCTG	1 cut(s)	1145
RsaI	GTAC	4 cut(s)	100, 295, 593, 1559
RsaNI	GTAC	4 cut(s)	99, 294, 592, 1558
RseI	CAYNNNNRTG	1 cut(s)	739
SacII	CCGCGG	1 cut(s)	363
SalI	GTCGAC	1 cut(s)	104
SapI	GCTCTTC	1 cut(s)	1352
SaqAI	TTAA	2 cut(s)	302, 917
SatI	GCNGC	9 cut(s)	363, 441, 979, 1008, 1104, 1125, 1215, 1229, 1440
Sau3AI	GATC	8 cut(s)	77, 422, 604, 650, 935, 964, 1506, 1592
Sau96I	GGNCC	3 cut(s)	169, 170, 1333
ScrFI	CCNGG	2 cut(s)	260, 1280
SduI	GDGCHC	3 cut(s)	173, 1114, 1618
SfaNI	GCATC	3 cut(s)	700, 897, 1160
Sfr303I	CCGCGG	1 cut(s)	363
SgrBI	CCGCGG	1 cut(s)	363
SgrDI	CGTCGACG	1 cut(s)	104
SinI	GGWCC	1 cut(s)	1333
SmiMI	CAYNNNNRTG	1 cut(s)	739
SmlI	CTYRAG	2 cut(s)	587, 1483
SmoI	CTYRAG	2 cut(s)	587, 1483
SphI	GCATGC	1 cut(s)	1413
Sse9I	AATT	5 cut(s)	53, 70, 229, 236, 714
SseBI	AGGCCT	1 cut(s)	1473
SsiI	CCGC	6 cut(s)	360, 362, 979, 1007, 1075, 1550
SspMI	CTAG	2 cut(s)	632, 822
StuI	AGGCCT	1 cut(s)	1473
StyD4I	CCNGG	2 cut(s)	258, 1278
StyI	CCWWGG	1 cut(s)	379
TaaI	ACNGT	5 cut(s)	103, 206, 646, 1029, 1297
TaiI	ACGT	2 cut(s)	388, 465
TaqI	TCGA	4 cut(s)	44, 105, 465, 599
TasI	AATT	5 cut(s)	53, 70, 229, 236, 714
TatI	WGTACW	2 cut(s)	293, 1557
TauI	GCSGC	3 cut(s)	365, 981, 1010
TfiI	GAWTC	4 cut(s)	307, 469, 1376, 1527
Tru1I	TTAA	2 cut(s)	302, 917
Tru9I	TTAA	2 cut(s)	302, 917
TscAI	CASTG	6 cut(s)	337, 664, 1084, 1164, 1420, 1521
TseFI	GTSAC	1 cut(s)	147
TseI	GCWGC	6 cut(s)	440, 1103, 1124, 1214, 1228, 1439
Tsp45I	GTSAC	1 cut(s)	147
TspDTI	ATGAA	1 cut(s)	21
TspGWI	ACGGA	1 cut(s)	897
TspRI	CASTG	6 cut(s)	337, 664, 1084, 1164, 1420, 1521
Van91I	CCANNNNNTGG	3 cut(s)	180, 524, 1271
VpaK11BI	GGWCC	1 cut(s)	1333
XagI	CCTNNNNNAGG	1 cut(s)	599
XapI	RAATTY	3 cut(s)	53, 70, 236
XceI	RCATGY	1 cut(s)	1413
XcmI	CCANNNNNNNNNTGG	2 cut(s)	181, 1031
XmiI	GTMKAC	1 cut(s)	105
XmnI	GAANNNNTTC	1 cut(s)	847
XspI	CTAG	2 cut(s)	632, 822
ZraI	GACGTC	2 cut(s)	386, 463
Zsp2I	ATGCAT	1 cut(s)	912

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.