Rh3CG300200
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Forward (+)
30990163 .. 30997000
6838 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG300200.1

Sequence Viewer

Length: 1518 bp
ATGCAAGCGTCAACTTATGGTTCGATCAGAGAGAAGTTGGTTTTCGGGGTCCAAGTCAGACAGCAAAGGAAGGTGTTGGGGTCAAGTACAGGGTTAAAGAATCTGCGTATGACAGATAAGGCCACTGGCTTTGGTGGATTGAAGCTCACTTCTGCGGCTATGGGAGCCAACCTCGGACGTCTTGATGGGATTTCCATGACTTCCTTGAAACCCAGATCAGTCAAGGCTCACGCTGCTTCTGACGCAGATGGAGACGTTGAGAATCTTGTTCCTCCCAAGCCTCAGTTCAAATCTTCTGGAATAGTGTTGCCATTTGTTGGTGTTGCCTGTCTTGGAGCCATTTTATTTGGTTATCATCTCGGGGTGGTAAATGGTGCTCTTGAGTACCTGTCGAAGGATCTTGGTATTACTGAAAACGTTGCATTAAAAGGGTGGGTGGTTAGCACACTTCTAGCTGGTGCCACAGTTGGATCTTTCACTGGTGGAACATTGGCTGACAAGTTTGGGAGAACTAGAACTTTTCAACTTGATGCAATTCCACTAACGATTGGAGCATTTTTATGTGCCACAGCACAGAGTGTGGAGCAAATGATAGTTGGCCGCTTACTTGCTGGCATTGGAATCGGCATCTCATCGGCTATTGTCCCACTTTACATTTCTGAGATCTCCCCAACTGAAATTCGGGGCGCACTTGGATCTGTAAACCAGCTTTTTATATGTCTTGGAATCCTTGGAGCACTGGTGGCTGGATTACCTTTATCAGCAAATCCGTTATGGTGGAGGACAATGTTTGGTATTGCAATAGTTCCCTCTGTTCTATTGGCTTTAGGAATGGCTGTTTCACCCGAAAGTCCTAGATGGCTCTTACAGCAAGGAAAAACTTCTCAGGCTGAAAAGGTTATAAAAACATTATACGGAAAAGAGAGAGTAACTGAGGTGATGCATGACTTAACATCAACAAGTCATGGATCTGCTGAACCCGAAGCAGGCTGGTTTGATCTGTTTAGTAGCCGCTATTGGAAAGTTGTTAGTGTTGGTGCGGCACTTTTCTTGTTCCAACAGTTAGCTGGGATAAATGCTGTGGTTTATTATTCCACTTCTGTCTTCCGCAGTGCTGGCATAACATCAGATGTTGCAGCAAGTGCTCTCGTTGGAGCAGCAAATGTCTTTGGCACAGCTGTTGCATCATCACTGATGGACAGACAAGGAAGGAAAAGTCTTCTTCTCATTAGTTTTGGAGGAATGGCTGCTTCAATGTTGCTGCTTGCTTTGTCTTTCACTTGGAGTGTTTTGGCTCCATATTCTGGCACCCTGGCTGTCGCTGGGACTGTTCTCTATGTATTGTCCTTTTCGCTTGGCGCTGGTCCTGTGCCTGCTCTTCTTCTGCCAGAGATATTTGCTTCAAGAATCAGAGCAAAAGCAGTTTCTTTGTCATTGGGCATGCACTGGGTAAGTAGCTATAGAAAATGCATATTTTTTTTGAAGTGGGATGGTACCCTTCTAATCAATATCTTATAA

Protein Analysis

505

Amino Acids

53.18

Weight (kDa)

9.64

Isoelectric Point (pI)

27.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 108 - 487 3.1e-95 Sugar (and other) transporter
MFS_1 PF07690 110 - 476 1.5e-27 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 902, 1516
AatII GACGTC 1 cut(s) 181
Acc65I GGTACC 1 cut(s) 1493
AccB1I GGYRCC 3 cut(s) 458, 1307, 1493
AccB7I CCANNNNNTGG 2 cut(s) 317, 1304
AciI CCGC 5 cut(s) 155, 601, 1012, 1040, 1108
AclI AACGTT 1 cut(s) 417
AclWI GGATC 4 cut(s) 405, 478, 703, 976
AcoI YGGCCR 1 cut(s) 598
AcsI RAATTY 1 cut(s) 678
AcyI GRCGYC 1 cut(s) 178
AdeI CACNNNGTG 1 cut(s) 578
AfaI GTAC 3 cut(s) 88, 386, 1495
AfiI CCNNNNNNNGG 4 cut(s) 317, 394, 986, 1304
AgsI TTSAA 7 cut(s) 142, 208, 289, 524, 1254, 1404, 1483
AjnI CCWGG 1 cut(s) 1311
AjuI GAANNNNNNNTTGG 2 cut(s) 269, 301
AluBI AGCT 6 cut(s) 145, 455, 709, 1067, 1178, 1458
AluI AGCT 6 cut(s) 145, 455, 709, 1067, 1178, 1458
Alw21I GWGCWC 3 cut(s) 379, 739, 1147
Alw26I GTCTC 1 cut(s) 246
AlwI GGATC 4 cut(s) 405, 478, 703, 976
Ama87I CYCGRG 1 cut(s) 359
AoxI GGCC 2 cut(s) 120, 598
ApeKI GCWGC 5 cut(s) 233, 1136, 1157, 1247, 1261
ApoI RAATTY 1 cut(s) 678
Asp700I GAANNNNTTC 1 cut(s) 880
Asp718I GGTACC 1 cut(s) 1493
AspLEI GCGC 2 cut(s) 689, 1361
AspS9I GGNCC 2 cut(s) 49, 1364
AsuHPI GGTGA 2 cut(s) 834, 949
AvaI CYCGRG 1 cut(s) 359
AvaII GGWCC 2 cut(s) 49, 1364
BanI GGYRCC 3 cut(s) 458, 1307, 1493
BbsI GAAGAC 2 cut(s) 1096, 1211
Bbv12I GWGCWC 3 cut(s) 379, 739, 1147
BbvI GCAGC 5 cut(s) 220, 1148, 1169, 1234, 1248
BccI CCATC 5 cut(s) 179, 242, 852, 1189, 1484
BcgI CGANNNNNNTGC 2 cut(s) 604, 638
BciT130I CCWGG 1 cut(s) 1313
BcoDI GTCTC 1 cut(s) 246
BfaI CTAG 3 cut(s) 452, 513, 855
BfmI CTRYAG 1 cut(s) 1459
BfoI RGCGCY 1 cut(s) 1362
BglII AGATCT 1 cut(s) 663
BisI GCNGC 9 cut(s) 156, 234, 601, 1012, 1041, 1137, 1158, 1248, 1262
BlsI GCNGC 9 cut(s) 157, 235, 602, 1013, 1042, 1138, 1159, 1249, 1263
Bme1390I CCNGG 1 cut(s) 1313
Bme18I GGWCC 2 cut(s) 49, 1364
BmeT110I CYCGRG 1 cut(s) 359
BmgT120I GGNCC 2 cut(s) 49, 1364
BmiI GGNNCC 7 cut(s) 50, 166, 337, 460, 1296, 1309, 1495
BmrFI CCNGG 1 cut(s) 1313
BmrI ACTGGG 1 cut(s) 1456
BmsI GCATC 4 cut(s) 520, 636, 930, 1193
BmuI ACTGGG 1 cut(s) 1456
BpiI GAAGAC 2 cut(s) 1096, 1211
BplI GAGNNNNNCTC 2 cut(s) 156, 188
BpuEI CTTGAG 1 cut(s) 401
BsaHI GRCGYC 1 cut(s) 178
BsaJI CCNNGG 3 cut(s) 172, 730, 1311
BsaXI ACNNNNNCTCC 2 cut(s) 726, 756
Bsc4I CCNNNNNNNGG 4 cut(s) 317, 394, 986, 1304
Bse1I ACTGG 4 cut(s) 130, 484, 744, 1451
BseBI CCWGG 1 cut(s) 1313
BseDI CCNNGG 3 cut(s) 172, 730, 1311
BseGI GGATG 1 cut(s) 1495
BseLI CCNNNNNNNGG 4 cut(s) 317, 394, 986, 1304
BseMII CTCAG 4 cut(s) 296, 651, 899, 924
BseNI ACTGG 4 cut(s) 130, 484, 744, 1451
BseXI GCAGC 5 cut(s) 220, 1148, 1169, 1234, 1248
BseYI CCCAGC 2 cut(s) 1067, 1322
BshFI GGCC 2 cut(s) 122, 600
BshNI GGYRCC 3 cut(s) 458, 1307, 1493
BsiHKAI GWGCWC 3 cut(s) 379, 739, 1147
BsiHKCI CYCGRG 1 cut(s) 359
BslFI GGGAC 2 cut(s) 629, 1339
BslI CCNNNNNNNGG 4 cut(s) 317, 394, 986, 1304
BsmAI GTCTC 1 cut(s) 246
BsmBI CGTCTC 1 cut(s) 246
BsmFI GGGAC 2 cut(s) 629, 1339
BsnI GGCC 2 cut(s) 122, 600
BsoBI CYCGRG 1 cut(s) 359
Bsp1286I GDGCHC 3 cut(s) 379, 739, 1147
Bsp143I GATC 8 cut(s) 24, 215, 397, 470, 663, 695, 968, 997
BspACI CCGC 5 cut(s) 155, 601, 1012, 1040, 1108
BspANI GGCC 2 cut(s) 122, 600
BspCNI CTCAG 4 cut(s) 295, 652, 898, 925
BspLI GGNNCC 7 cut(s) 50, 166, 337, 460, 1296, 1309, 1495
BspPI GGATC 4 cut(s) 405, 478, 703, 976
BspQI GCTCTTC 1 cut(s) 1383
BspT107I GGYRCC 3 cut(s) 458, 1307, 1493
BsrI ACTGG 4 cut(s) 130, 484, 744, 1451
BssECI CCNNGG 3 cut(s) 172, 730, 1311
BssMI GATC 8 cut(s) 24, 215, 397, 470, 663, 695, 968, 997
BssNI GRCGYC 1 cut(s) 178
BssT1I CCWWGG 1 cut(s) 730
Bst2UI CCWGG 1 cut(s) 1313
Bst4CI ACNGT 3 cut(s) 466, 1062, 1330
Bst6I CTCTTC 1 cut(s) 1383
BstACI GRCGYC 1 cut(s) 178
BstAPI GCANNNNNTGC 1 cut(s) 1142
BstC8I GCNNGC 7 cut(s) 6, 613, 988, 1117, 1266, 1374, 1442
BstDEI CTNAG 4 cut(s) 282, 660, 885, 933
BstENI CCTNNNNNAGG 1 cut(s) 392
BstF5I GGATG 1 cut(s) 1495
BstH2I RGCGCY 1 cut(s) 1362
BstHHI GCGC 2 cut(s) 689, 1361
BstKTI GATC 8 cut(s) 27, 218, 400, 473, 666, 698, 971, 1000
BstMAI GTCTC 1 cut(s) 246
BstMBI GATC 8 cut(s) 24, 215, 397, 470, 663, 695, 968, 997
BstMWI GCNNNNNNNGC 7 cut(s) 164, 233, 242, 743, 868, 1116, 1142
BstNI CCWGG 1 cut(s) 1313
BstNSI RCATGY 1 cut(s) 1444
BstSCI CCNGG 1 cut(s) 1311
BstSFI CTRYAG 1 cut(s) 1459
BstV1I GCAGC 5 cut(s) 220, 1148, 1169, 1234, 1248
BstV2I GAAGAC 2 cut(s) 1096, 1211
BstX2I RGATCY 5 cut(s) 397, 470, 663, 695, 968
BstYI RGATCY 5 cut(s) 397, 470, 663, 695, 968
BsuRI GGCC 2 cut(s) 122, 600
BtsCI GGATG 1 cut(s) 1495
BtsI GCAGTG 1 cut(s) 1117
BtsIMutI CAGTG 6 cut(s) 123, 477, 737, 1117, 1190, 1444
Cac8I GCNNGC 7 cut(s) 6, 613, 988, 1117, 1266, 1374, 1442
CfoI GCGC 2 cut(s) 689, 1361
Cfr13I GGNCC 2 cut(s) 49, 1364
CseI GACGC 1 cut(s) 251
Csp6I GTAC 3 cut(s) 87, 385, 1494
CspCI CAANNNNNGTGG 2 cut(s) 112, 147
CviAII CATG 4 cut(s) 196, 944, 965, 1441
CviQI GTAC 3 cut(s) 87, 385, 1494
DdeI CTNAG 4 cut(s) 282, 660, 885, 933
DpnI GATC 8 cut(s) 26, 217, 399, 472, 665, 697, 970, 999
DpnII GATC 8 cut(s) 24, 215, 397, 470, 663, 695, 968, 997
DraIII CACNNNGTG 1 cut(s) 578
EaeI YGGCCR 1 cut(s) 598
Eam1104I CTCTTC 1 cut(s) 1383
EarI CTCTTC 1 cut(s) 1383
Eco130I CCWWGG 1 cut(s) 730
Eco47I GGWCC 2 cut(s) 49, 1364
Eco88I CYCGRG 1 cut(s) 359
EcoNI CCTNNNNNAGG 1 cut(s) 392
EcoRII CCWGG 1 cut(s) 1311
EcoT14I CCWWGG 1 cut(s) 730
EcoT22I ATGCAT 2 cut(s) 945, 1472
ErhI CCWWGG 1 cut(s) 730
Esp3I CGTCTC 1 cut(s) 246
FaeI CATG 4 cut(s) 199, 947, 968, 1444
FaqI GGGAC 2 cut(s) 629, 1339
FatI CATG 4 cut(s) 195, 943, 964, 1440
Fnu4HI GCNGC 9 cut(s) 156, 234, 601, 1012, 1041, 1137, 1158, 1248, 1262
FokI GGATG 1 cut(s) 1502
Fsp4HI GCNGC 9 cut(s) 156, 234, 601, 1012, 1041, 1137, 1158, 1248, 1262
FspBI CTAG 3 cut(s) 452, 513, 855
GlaI GCGC 2 cut(s) 688, 1360
GluI GCNGC 9 cut(s) 156, 234, 601, 1012, 1041, 1137, 1158, 1248, 1262
GsaI CCCAGC 2 cut(s) 1071, 1326
HaeII RGCGCY 1 cut(s) 1362
HaeIII GGCC 2 cut(s) 122, 600
HgaI GACGC 1 cut(s) 251
HhaI GCGC 2 cut(s) 689, 1361
Hin1I GRCGYC 1 cut(s) 178
Hin1II CATG 4 cut(s) 199, 947, 968, 1444
Hin6I GCGC 2 cut(s) 687, 1359
HinP1I GCGC 2 cut(s) 687, 1359
HincII GTYRAC 1 cut(s) 12
HindII GTYRAC 1 cut(s) 12
HinfI GANTC 5 cut(s) 100, 262, 621, 726, 1407
HphI GGTGA 2 cut(s) 834, 949
Hpy166II GTNNAC 2 cut(s) 12, 703
Hpy188I TCNGA 7 cut(s) 29, 59, 176, 241, 661, 1129, 1412
Hpy188III TCNNGA 4 cut(s) 182, 297, 380, 1404
Hpy8I GTNNAC 2 cut(s) 12, 703
HpyAV CCTTC 4 cut(s) 64, 388, 1203, 1508
HpyCH4III ACNGT 3 cut(s) 466, 1062, 1330
HpyCH4IV ACGT 3 cut(s) 178, 255, 417
HpyCH4V TGCA 9 cut(s) 4, 422, 533, 800, 943, 1136, 1184, 1444, 1470
HpyF10VI GCNNNNNNNGC 7 cut(s) 164, 233, 242, 743, 868, 1116, 1142
HpyF3I CTNAG 4 cut(s) 282, 660, 885, 933
HpySE526I ACGT 3 cut(s) 178, 255, 417
Hsp92I GRCGYC 1 cut(s) 178
Hsp92II CATG 4 cut(s) 199, 947, 968, 1444
HspAI GCGC 2 cut(s) 687, 1359
KpnI GGTACC 1 cut(s) 1497
Kzo9I GATC 8 cut(s) 24, 215, 397, 470, 663, 695, 968, 997
LguI GCTCTTC 1 cut(s) 1383
LmnI GCTCC 7 cut(s) 164, 335, 551, 583, 734, 1154, 1300
Lsp1109I GCAGC 5 cut(s) 220, 1148, 1169, 1234, 1248
LweI GCATC 4 cut(s) 520, 636, 930, 1193
MaeI CTAG 3 cut(s) 452, 513, 855
MaeII ACGT 3 cut(s) 178, 255, 417
MaeIII GTNAC 1 cut(s) 928
MalI GATC 8 cut(s) 26, 217, 399, 472, 665, 697, 970, 999
MboI GATC 8 cut(s) 24, 215, 397, 470, 663, 695, 968, 997
MboII GAAGA 6 cut(s) 285, 1096, 1211, 1214, 1370, 1373
MflI RGATCY 5 cut(s) 397, 470, 663, 695, 968
MhlI GDGCHC 3 cut(s) 379, 739, 1147
MluCI AATT 2 cut(s) 534, 678
MmeI TCCRAC 3 cut(s) 448, 1081, 1132
MnlI CCTC 7 cut(s) 182, 282, 291, 774, 820, 928, 1232
Mph1103I ATGCAT 2 cut(s) 945, 1472
MroXI GAANNNNTTC 1 cut(s) 880
MseI TTAA 3 cut(s) 95, 425, 950
MslI CAYNNNNRTG 1 cut(s) 559
MspA1I CMGCKG 1 cut(s) 1178
MspR9I CCNGG 1 cut(s) 1313
MvaI CCWGG 1 cut(s) 1313
MwoI GCNNNNNNNGC 7 cut(s) 164, 233, 242, 743, 868, 1116, 1142
NdeII GATC 8 cut(s) 24, 215, 397, 470, 663, 695, 968, 997
NlaIII CATG 4 cut(s) 199, 947, 968, 1444
NlaIV GGNNCC 7 cut(s) 50, 166, 337, 460, 1296, 1309, 1495
NsiI ATGCAT 2 cut(s) 945, 1472
NspI RCATGY 1 cut(s) 1444
PaeI GCATGC 1 cut(s) 1444
PciSI GCTCTTC 1 cut(s) 1383
PdmI GAANNNNTTC 1 cut(s) 880
PfeI GAWTC 5 cut(s) 100, 262, 621, 726, 1407
PflMI CCANNNNNTGG 2 cut(s) 317, 1304
PkrI GCNGC 9 cut(s) 157, 235, 602, 1013, 1042, 1138, 1159, 1249, 1263
PsiI TTATAA 2 cut(s) 902, 1516
Psp1406I AACGTT 1 cut(s) 417
Psp6I CCWGG 1 cut(s) 1311
PspFI CCCAGC 2 cut(s) 1067, 1322
PspGI CCWGG 1 cut(s) 1311
PspN4I GGNNCC 7 cut(s) 50, 166, 337, 460, 1296, 1309, 1495
PspPI GGNCC 2 cut(s) 49, 1364
PsuI RGATCY 5 cut(s) 397, 470, 663, 695, 968
PvuII CAGCTG 1 cut(s) 1178
RsaI GTAC 3 cut(s) 88, 386, 1495
RsaNI GTAC 3 cut(s) 87, 385, 1494
RseI CAYNNNNRTG 1 cut(s) 559
SapI GCTCTTC 1 cut(s) 1383
SaqAI TTAA 3 cut(s) 95, 425, 950
SatI GCNGC 9 cut(s) 156, 234, 601, 1012, 1041, 1137, 1158, 1248, 1262
Sau3AI GATC 8 cut(s) 24, 215, 397, 470, 663, 695, 968, 997
Sau96I GGNCC 2 cut(s) 49, 1364
ScrFI CCNGG 1 cut(s) 1313
SduI GDGCHC 3 cut(s) 379, 739, 1147
SfaNI GCATC 4 cut(s) 520, 636, 930, 1193
SfcI CTRYAG 1 cut(s) 1459
SinI GGWCC 2 cut(s) 49, 1364
SmiMI CAYNNNNRTG 1 cut(s) 559
SmlI CTYRAG 1 cut(s) 380
SmoI CTYRAG 1 cut(s) 380
SphI GCATGC 1 cut(s) 1444
Sse9I AATT 2 cut(s) 534, 678
SsiI CCGC 5 cut(s) 155, 601, 1012, 1040, 1108
SspMI CTAG 3 cut(s) 452, 513, 855
StyD4I CCNGG 1 cut(s) 1311
StyI CCWWGG 1 cut(s) 730
TaaI ACNGT 3 cut(s) 466, 1062, 1330
TaiI ACGT 3 cut(s) 181, 258, 420
TaqI TCGA 2 cut(s) 23, 392
TasI AATT 2 cut(s) 534, 678
TatI WGTACW 1 cut(s) 86
TauI GCSGC 4 cut(s) 158, 603, 1014, 1043
TfiI GAWTC 5 cut(s) 100, 262, 621, 726, 1407
Tru1I TTAA 3 cut(s) 95, 425, 950
Tru9I TTAA 3 cut(s) 95, 425, 950
TscAI CASTG 6 cut(s) 130, 484, 744, 1117, 1197, 1451
TseI GCWGC 5 cut(s) 233, 1136, 1157, 1247, 1261
TspGWI ACGGA 2 cut(s) 759, 930
TspRI CASTG 6 cut(s) 130, 484, 744, 1117, 1197, 1451
Van91I CCANNNNNTGG 2 cut(s) 317, 1304
VpaK11BI GGWCC 2 cut(s) 49, 1364
XagI CCTNNNNNAGG 1 cut(s) 392
XapI RAATTY 1 cut(s) 678
XceI RCATGY 1 cut(s) 1444
XcmI CCANNNNNNNNNTGG 1 cut(s) 1064
XmnI GAANNNNTTC 1 cut(s) 880
XspI CTAG 3 cut(s) 452, 513, 855
ZraI GACGTC 1 cut(s) 179
Zsp2I ATGCAT 2 cut(s) 945, 1472
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.