Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0007483

Physical Location & Seq

Genomic Coordinates Reverse (-)

5734576 .. 5739812

Gene Structure 5237 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g06980.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGACGGAAGAGAAAGATCGACGGCCGGAGACCGCCGCCGGCGACAGTGCAAAGCGGAAGCTGGAAGACATGAGTATCCTACTCGCGAAGCAGAAAGCTCAGGAAATCGCCGCCCGGCTCGTCACCAATGCCGAGTCGAAGCGCCCCCGAGTCGACGACGAGTCGTCGTTCCAGCCCAACCCCGTCTACTCCGCTCCCGCCTACCCTGTGTTCACTGCACAAACAGGACACTCTTATGGTTCAGGCACCAGCAAGAAAATAGATATTCCAAATGGAAAGGTTGGTGTAATTATTGGGAAGCAAGGAGAAACGATAAGACAACTACAATTACAGTCTGGGGCAAAAATCCAGATAACCAGGGATTCAGAAGCTAATCCTAATTCTCTAACGAGAGATGTGGAGTTGACGGGTACATCTGAACAGATTAGTAGAGCAGAACAACTTATCAATGATGTAATAGCAGAGGCAGATGCAGGGGGCGCTGCTCCACCTACAAATCAGGGATTTAACTCAATGCAAGCTGGAGGGGAACAGTTTGTCATGAAAGTTCCAAACAATAAGGTTGCTTTGATTATTGGCAAGGGGGGTGAGACTATCAGGAATATGCAAGCCAAGTCAGGAGCTCGCATTCAGATTGTACCATTGCACCTTCCTCCTGGTGATACATCAACTGAGAGATCAGTATATATAAATGGAGGGCAAGAGCAAATTGAGGCAGCCAAAGAATTGGTGAATGAAGTTATCAGTGGGAAGCGTTTATTAAACGCATCTGGTACCAATAGCTATATGCATCAACCCTCCTATCCCCCTTCTGGTAATTGGGCCCCGCCTGGACAACCTCCAATTCAGCAACAGCAGCCTCATTATGGGTACACACAGCCCGGAGGTTATGGTACACCCACGGCACCTACCTCATACTATGGTAACTATCCGGCCCAGGTAGCAAGTTGGGATCAGTCAAACCAGGTACCATCTCAGCCACCTCAGGATAGCAGTGGATACAATTATTATGGACAACAACCACCAATGGGGTCAGCTCCCCCAAATCCTGCCTACTACAATCAGACATCTCAGGGTTATGCTCAGCAGCCACCAAGTTACGATCAGGGTTACGCTCAGCAGCCACCAAGTTATGATCAGAGTTACGCTCAGCAACCTCCAAGTTATGATCAGAGTTATGGTCAGCAGCCACCACACTATGGACATAACATCTCTAGTCAGGCTCCAGCATCTGATCAGCAACAATATGGAACTCCTGGATATGGGCCGCCAGCAGTGTCATCAGGCCTAGATGGCAGCTCTTCTGCACAAACGACTCAGCCATCATCTGCATATGCACCTCCTTATGGCCAGCCAACGGATAACCCACAGTCTGGGTATTGGTCTCATCCGAGCAGCACAGGCCAACCACACACTCAAGCTGGATATTACCAACAAAGTTATGGAGAGCAGCAGCCAGCCGAAGATGCTTCTGCAGCATCTCAGGCAGCATCATATGGACAAGGTGGGTATGCTCAGCCAGACCCTTCTGCCAATGGGGAGTCACAGCATCAGCCAGATCAGCAGTCACAGCCACCTACCAATGGATATGCAGACCAGTCGTCAGCTTCCGATGCTGAAAGGACTGGTGACAGGAATGTAGAAGGAGATGGATCAGCCCCTCCAACAGAACCTGTTGGTTCTCAAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0001505 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010586 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010984 GO:0010985 GO:0010988 GO:0010989 GO:0016070 GO:0016071 GO:0017091 GO:0017148 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0034097 GO:0034248 GO:0034249 GO:0034641 GO:0034660 GO:0035925 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043487 GO:0043488 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045019 GO:0045428 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050779 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071345 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1903311 GO:1903313 GO:1903426 GO:1903427 GO:1904406 GO:2000112 GO:2000113 GO:2000377 GO:2000378

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

564

Amino Acids

59.97

Weight (kDa)

4.87

Isoelectric Point (pI)

63.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	85 - 151	4.3e-17	KH domain
KH_1	PF00013	180 - 246	1.8e-18	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007483)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g06980
malus_domestica	MD00G1050700.v1.1 MD10G1088600.v1.1
prunus_persica	Prupe.8G115800_v2.0.a1 Prupe.8G115800_v2.0.a1
pyrus_communis	pycom05g06770 pycom10g07150 pycom10g07160
rosa_chinensis	RchiOBHm_Chr4g0444281 RchiOBHm_Chr6g0259341
rosa_laevigata	RLG00000014538
rosa_multiflora	Rmu_sc0004593.1_g000005 Rmu_sc0025785.1_g000001 Rmu_sc0031504.1_g000001
rosa_roxburghii	Rroxscaffold_1G00009040 Rroxscaffold_6G00423380 Rroxscaffold_7G00206580
rosa_rugosa	Rorug02G0459600 Rorug05G0587700
rosa_samantha	Rh6AG103700 Rh6BG096900 Rh6CG093000 Rh6CG093100 Rh6DG086900
rosa_wichuraiana	Rw6G008950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	773, 967
AccB1I	GGYRCC	4 cut(s)	245, 773, 904, 967
AccB7I	CCANNNNNTGG	2 cut(s)	1199, 1373
AccBSI	CCGCTC	1 cut(s)	194
AccI	GTMKAC	2 cut(s)	153, 186
AccII	CGCG	1 cut(s)	86
AciI	CCGC	8 cut(s)	33, 36, 55, 111, 192, 198, 827, 1268
AclWI	GGATC	2 cut(s)	960, 1660
AcoI	YGGCCR	2 cut(s)	23, 1348
AfaI	GTAC	6 cut(s)	412, 639, 775, 872, 895, 969
AfiI	CCNNNNNNNGG	9 cut(s)	812, 866, 1028, 1199, 1262, 1346, 1357, 1373, 1583
AhdI	GACNNNNNGTC	3 cut(s)	160, 163, 1600
AjnI	CCWGG	6 cut(s)	356, 655, 829, 936, 963, 1255
Alw21I	GWGCWC	1 cut(s)	625
Alw26I	GTCTC	3 cut(s)	23, 584, 1389
AlwI	GGATC	2 cut(s)	960, 1660
AlwNI	CAGNNNCTG	2 cut(s)	1232, 1673
Ama87I	CYCGRG	1 cut(s)	147
AoxI	GGCC	7 cut(s)	23, 822, 933, 1265, 1285, 1348, 1402
ApaI	GGGCCC	1 cut(s)	826
Asp718I	GGTACC	2 cut(s)	773, 967
AspLEI	GCGC	2 cut(s)	144, 482
AspS9I	GGNCC	4 cut(s)	822, 823, 934, 1265
AsuC2I	CCSGG	2 cut(s)	115, 882
AsuHPI	GGTGA	5 cut(s)	115, 599, 671, 742, 1640
AvaI	CYCGRG	1 cut(s)	147
AxyI	CCTNAGG	1 cut(s)	984
BaeGI	GKGCMC	1 cut(s)	826
BaeI	ACNNNNGTAYC	2 cut(s)	58, 91
BalI	TGGCCA	1 cut(s)	1350
BanI	GGYRCC	4 cut(s)	245, 773, 904, 967
BanII	GRGCYC	2 cut(s)	625, 826
BbsI	GAAGAC	1 cut(s)	72
Bbv12I	GWGCWC	1 cut(s)	625
BccI	CCATC	4 cut(s)	979, 1286, 1330, 1643
BceAI	ACGGC	2 cut(s)	38, 918
BcgI	CGANNNNNNTGC	2 cut(s)	1581, 1615
BciT130I	CCWGG	6 cut(s)	358, 657, 831, 938, 965, 1257
BciVI	GTATCC	2 cut(s)	86, 992
BclI	TGATCA	3 cut(s)	1135, 1168, 1234
BcnI	CCSGG	2 cut(s)	115, 882
BcoDI	GTCTC	3 cut(s)	23, 584, 1389
BfaI	CTAG	2 cut(s)	1215, 1289
BfmI	CTRYAG	1 cut(s)	1473
BfoI	RGCGCY	2 cut(s)	145, 483
BfuI	GTATCC	2 cut(s)	86, 992
BglI	GCCNNNNNGGC	1 cut(s)	1293
BlpI	GCTNAGC	4 cut(s)	1083, 1116, 1149, 1515
Bme1390I	CCNGG	8 cut(s)	115, 358, 657, 831, 882, 938, 965, 1257
BmeRI	GACNNNNNGTC	3 cut(s)	160, 163, 1600
BmeT110I	CYCGRG	1 cut(s)	147
BmgT120I	GGNCC	4 cut(s)	822, 823, 934, 1265
BmiI	GGNNCC	7 cut(s)	247, 775, 824, 825, 906, 969, 1224
BmrFI	CCNGG	8 cut(s)	115, 358, 657, 831, 882, 938, 965, 1257
BmsI	GCATC	9 cut(s)	460, 776, 799, 1238, 1456, 1487, 1499, 1558, 1603
BpiI	GAAGAC	1 cut(s)	72
BplI	GAGNNNNNCTC	2 cut(s)	1132, 1164
BpmI	CTGGAG	2 cut(s)	543, 1209
Bpu10I	CCTNAGC	1 cut(s)	99
Bpu1102I	GCTNAGC	4 cut(s)	1083, 1116, 1149, 1515
BpuEI	CTTGAG	1 cut(s)	1401
BpuMI	CCSGG	2 cut(s)	115, 882
BsaI	GGTCTC	2 cut(s)	23, 1389
BsaJI	CCNNGG	3 cut(s)	357, 900, 936
Bsc4I	CCNNNNNNNGG	9 cut(s)	812, 866, 1028, 1199, 1262, 1346, 1357, 1373, 1583
Bse118I	RCCGGY	1 cut(s)	38
Bse1I	ACTGG	2 cut(s)	1597, 1630
Bse21I	CCTNAGG	1 cut(s)	984
Bse3DI	GCAATG	1 cut(s)	641
BseBI	CCWGG	6 cut(s)	358, 657, 831, 938, 965, 1257
BseDI	CCNNGG	3 cut(s)	357, 900, 936
BseGI	GGATG	1 cut(s)	1387
BseLI	CCNNNNNNNGG	9 cut(s)	812, 866, 1028, 1199, 1262, 1346, 1357, 1373, 1583
BseMI	GCAATG	1 cut(s)	641
BseNI	ACTGG	2 cut(s)	1597, 1630
BseSI	GKGCMC	1 cut(s)	826
BseX3I	CGGCCG	1 cut(s)	23
BsgI	GTGCAG	2 cut(s)	201, 1290
Bsh1236I	CGCG	1 cut(s)	86
Bsh1285I	CGRYCG	1 cut(s)	26
BshFI	GGCC	7 cut(s)	25, 824, 935, 1267, 1287, 1350, 1404
BshNI	GGYRCC	4 cut(s)	245, 773, 904, 967
BsiEI	CGRYCG	1 cut(s)	26
BsiHKAI	GWGCWC	1 cut(s)	625
BsiHKCI	CYCGRG	1 cut(s)	147
BsiSI	CCGG	5 cut(s)	26, 39, 115, 882, 932
BslI	CCNNNNNNNGG	9 cut(s)	812, 866, 1028, 1199, 1262, 1346, 1357, 1373, 1583
BsmAI	GTCTC	3 cut(s)	23, 584, 1389
BsmI	GAATGC	1 cut(s)	627
BsnI	GGCC	7 cut(s)	25, 824, 935, 1267, 1287, 1350, 1404
Bso31I	GGTCTC	2 cut(s)	23, 1389
BsoBI	CYCGRG	1 cut(s)	147
Bsp120I	GGGCCC	1 cut(s)	822
Bsp1286I	GDGCHC	2 cut(s)	625, 826
Bsp143I	GATC	9 cut(s)	16, 677, 952, 1102, 1135, 1168, 1234, 1558, 1652
Bsp1720I	GCTNAGC	4 cut(s)	1083, 1116, 1149, 1515
Bsp68I	TCGCGA	1 cut(s)	86
BspACI	CCGC	8 cut(s)	33, 36, 55, 111, 192, 198, 827, 1268
BspANI	GGCC	7 cut(s)	25, 824, 935, 1267, 1287, 1350, 1404
BspFNI	CGCG	1 cut(s)	86
BspHI	TCATGA	1 cut(s)	540
BspLI	GGNNCC	7 cut(s)	247, 775, 824, 825, 906, 969, 1224
BspMAI	CTGCAG	1 cut(s)	1477
BspPI	GGATC	2 cut(s)	960, 1660
BspQI	GCTCTTC	1 cut(s)	1306
BspT107I	GGYRCC	4 cut(s)	245, 773, 904, 967
BspTNI	GGTCTC	2 cut(s)	23, 1389
BsrBI	CCGCTC	1 cut(s)	194
BsrDI	GCAATG	1 cut(s)	641
BsrFI	RCCGGY	1 cut(s)	38
BsrI	ACTGG	2 cut(s)	1597, 1630
BssAI	RCCGGY	1 cut(s)	38
BssECI	CCNNGG	3 cut(s)	357, 900, 936
BssMI	GATC	9 cut(s)	16, 677, 952, 1102, 1135, 1168, 1234, 1558, 1652
Bst2UI	CCWGG	6 cut(s)	358, 657, 831, 938, 965, 1257
Bst4CI	ACNGT	4 cut(s)	47, 333, 534, 1371
Bst6I	CTCTTC	2 cut(s)	3, 1306
BstC8I	GCNNGC	7 cut(s)	40, 519, 609, 625, 1272, 1352, 1458
BstDSI	CCRYGG	1 cut(s)	900
BstF5I	GGATG	1 cut(s)	1387
BstFNI	CGCG	1 cut(s)	86
BstH2I	RGCGCY	2 cut(s)	145, 483
BstHHI	GCGC	2 cut(s)	144, 482
BstKTI	GATC	9 cut(s)	19, 680, 955, 1105, 1138, 1171, 1237, 1561, 1655
BstMAI	GTCTC	3 cut(s)	23, 584, 1389
BstMBI	GATC	9 cut(s)	16, 677, 952, 1102, 1135, 1168, 1234, 1558, 1652
BstMCI	CGRYCG	1 cut(s)	26
BstNI	CCWGG	6 cut(s)	358, 657, 831, 938, 965, 1257
BstSCI	CCNGG	8 cut(s)	113, 356, 655, 829, 880, 936, 963, 1255
BstSFI	CTRYAG	1 cut(s)	1473
BstSLI	GKGCMC	1 cut(s)	826
BstUI	CGCG	1 cut(s)	86
BstV2I	GAAGAC	1 cut(s)	72
BstXI	CCANNNNNNTGG	1 cut(s)	727
BstZI	CGGCCG	1 cut(s)	23
Bsu36I	CCTNAGG	1 cut(s)	984
BsuI	GTATCC	2 cut(s)	86, 992
BsuRI	GGCC	7 cut(s)	25, 824, 935, 1267, 1287, 1350, 1404
BtgI	CCRYGG	1 cut(s)	900
BtsCI	GGATG	1 cut(s)	1387
BtsI	GCAGTG	3 cut(s)	213, 1000, 1281
BtsIMutI	CAGTG	5 cut(s)	52, 213, 751, 1000, 1281
BtuMI	TCGCGA	1 cut(s)	86
Cac8I	GCNNGC	7 cut(s)	40, 519, 609, 625, 1272, 1352, 1458
CaiI	CAGNNNCTG	2 cut(s)	1232, 1673
CciI	TCATGA	1 cut(s)	540
CfoI	GCGC	2 cut(s)	144, 482
Cfr10I	RCCGGY	1 cut(s)	38
Cfr13I	GGNCC	4 cut(s)	822, 823, 934, 1265
CsiI	ACCWGGT	1 cut(s)	963
Csp6I	GTAC	6 cut(s)	411, 638, 774, 871, 894, 968
CviAII	CATG	2 cut(s)	70, 541
CviQI	GTAC	6 cut(s)	411, 638, 774, 871, 894, 968
DpnI	GATC	9 cut(s)	18, 679, 954, 1104, 1137, 1170, 1236, 1560, 1654
DpnII	GATC	9 cut(s)	16, 677, 952, 1102, 1135, 1168, 1234, 1558, 1652
DriI	GACNNNNNGTC	3 cut(s)	160, 163, 1600
EaeI	YGGCCR	2 cut(s)	23, 1348
EagI	CGGCCG	1 cut(s)	23
Eam1104I	CTCTTC	2 cut(s)	3, 1306
Eam1105I	GACNNNNNGTC	3 cut(s)	160, 163, 1600
EarI	CTCTTC	2 cut(s)	3, 1306
Ecl136II	GAGCTC	1 cut(s)	623
EclXI	CGGCCG	1 cut(s)	23
Eco147I	AGGCCT	1 cut(s)	1287
Eco24I	GRGCYC	2 cut(s)	625, 826
Eco31I	GGTCTC	2 cut(s)	23, 1389
Eco52I	CGGCCG	1 cut(s)	23
Eco53kI	GAGCTC	1 cut(s)	623
Eco81I	CCTNAGG	1 cut(s)	984
Eco88I	CYCGRG	1 cut(s)	147
EcoICRI	GAGCTC	1 cut(s)	623
EcoO109I	RGGNCCY	1 cut(s)	823
EcoRII	CCWGG	6 cut(s)	356, 655, 829, 936, 963, 1255
EcoT22I	ATGCAT	1 cut(s)	792
EcoT38I	GRGCYC	2 cut(s)	625, 826
FaeI	CATG	2 cut(s)	73, 544
FatI	CATG	2 cut(s)	69, 540
FauI	CCCGC	2 cut(s)	205, 834
FauNDI	CATATG	2 cut(s)	1333, 1495
FbaI	TGATCA	3 cut(s)	1135, 1168, 1234
FblI	GTMKAC	2 cut(s)	153, 186
FokI	GGATG	1 cut(s)	1374
FriOI	GRGCYC	2 cut(s)	625, 826
FspBI	CTAG	2 cut(s)	1215, 1289
GlaI	GCGC	2 cut(s)	143, 481
GsuI	CTGGAG	2 cut(s)	543, 1209
HaeII	RGCGCY	2 cut(s)	145, 483
HaeIII	GGCC	7 cut(s)	25, 824, 935, 1267, 1287, 1350, 1404
HapII	CCGG	5 cut(s)	26, 39, 115, 882, 932
HhaI	GCGC	2 cut(s)	144, 482
Hin1II	CATG	2 cut(s)	73, 544
Hin6I	GCGC	2 cut(s)	142, 480
HinP1I	GCGC	2 cut(s)	142, 480
HincII	GTYRAC	2 cut(s)	154, 405
HindII	GTYRAC	2 cut(s)	154, 405
HinfI	GANTC	6 cut(s)	134, 150, 161, 362, 1315, 1541
HpaII	CCGG	5 cut(s)	26, 39, 115, 882, 932
HphI	GGTGA	5 cut(s)	115, 599, 671, 742, 1640
Hpy166II	GTNNAC	6 cut(s)	154, 187, 213, 405, 873, 896
Hpy188I	TCNGA	9 cut(s)	367, 418, 633, 1065, 1140, 1173, 1234, 1392, 1612
Hpy188III	TCNNGA	7 cut(s)	85, 101, 349, 541, 598, 618, 986
Hpy8I	GTNNAC	6 cut(s)	154, 187, 213, 405, 873, 896
Hpy99I	CGWCG	4 cut(s)	24, 158, 161, 169
HpyAV	CCTTC	4 cut(s)	659, 819, 1536, 1637
HpyCH4III	ACNGT	4 cut(s)	47, 333, 534, 1371
Hsp92II	CATG	2 cut(s)	73, 544
HspAI	GCGC	2 cut(s)	142, 480
KpnI	GGTACC	2 cut(s)	777, 971
KroI	GCCGGC	1 cut(s)	38
KroNI	GCCGGC	1 cut(s)	40
Ksp22I	TGATCA	3 cut(s)	1135, 1168, 1234
Kzo9I	GATC	9 cut(s)	16, 677, 952, 1102, 1135, 1168, 1234, 1558, 1652
LguI	GCTCTTC	1 cut(s)	1306
LmnI	GCTCC	5 cut(s)	199, 490, 620, 1042, 1228
LweI	GCATC	9 cut(s)	460, 776, 799, 1238, 1456, 1487, 1499, 1558, 1603
MabI	ACCWGGT	1 cut(s)	963
MaeI	CTAG	2 cut(s)	1215, 1289
MaeIII	GTNAC	8 cut(s)	121, 923, 1097, 1109, 1142, 1542, 1566, 1628
MalI	GATC	9 cut(s)	18, 679, 954, 1104, 1137, 1170, 1236, 1560, 1654
MbiI	CCGCTC	1 cut(s)	194
MboI	GATC	9 cut(s)	16, 677, 952, 1102, 1135, 1168, 1234, 1558, 1652
MboII	GAAGA	4 cut(s)	20, 77, 1293, 1475
MhlI	GDGCHC	2 cut(s)	625, 826
MlsI	TGGCCA	1 cut(s)	1350
MluCI	AATT	8 cut(s)	288, 326, 379, 708, 725, 817, 843, 1003
MluNI	TGGCCA	1 cut(s)	1350
MlyI	GAGTC	5 cut(s)	143, 159, 170, 1309, 1550
MmeI	TCCRAC	1 cut(s)	1688
Mox20I	TGGCCA	1 cut(s)	1350
Mph1103I	ATGCAT	1 cut(s)	792
MreI	CGCCGGCG	1 cut(s)	38
MroNI	GCCGGC	1 cut(s)	38
MscI	TGGCCA	1 cut(s)	1350
MseI	TTAA	2 cut(s)	507, 761
MslI	CAYNNNNRTG	1 cut(s)	234
Msp20I	TGGCCA	1 cut(s)	1350
MspI	CCGG	5 cut(s)	26, 39, 115, 882, 932
MspR9I	CCNGG	8 cut(s)	115, 358, 657, 831, 882, 938, 965, 1257
Mva1269I	GAATGC	1 cut(s)	627
MvaI	CCWGG	6 cut(s)	358, 657, 831, 938, 965, 1257
MvnI	CGCG	1 cut(s)	86
NaeI	GCCGGC	1 cut(s)	40
NciI	CCSGG	2 cut(s)	115, 882
NdeI	CATATG	2 cut(s)	1333, 1495
NdeII	GATC	9 cut(s)	16, 677, 952, 1102, 1135, 1168, 1234, 1558, 1652
NgoMIV	GCCGGC	1 cut(s)	38
NlaIII	CATG	2 cut(s)	73, 544
NlaIV	GGNNCC	7 cut(s)	247, 775, 824, 825, 906, 969, 1224
NmeAIII	GCCGAG	1 cut(s)	157
NmuCI	GTSAC	4 cut(s)	121, 1542, 1566, 1628
NruI	TCGCGA	1 cut(s)	86
NsiI	ATGCAT	1 cut(s)	792
PagI	TCATGA	1 cut(s)	540
PceI	AGGCCT	1 cut(s)	1287
PciSI	GCTCTTC	1 cut(s)	1306
PctI	GAATGC	1 cut(s)	627
PdiI	GCCGGC	1 cut(s)	40
PfeI	GAWTC	1 cut(s)	362
PflMI	CCANNNNNTGG	2 cut(s)	1199, 1373
PfoI	TCCNGGA	1 cut(s)	1255
PleI	GAGTC	5 cut(s)	142, 158, 169, 1309, 1549
PpsI	GAGTC	5 cut(s)	142, 158, 169, 1309, 1549
Psp124BI	GAGCTC	1 cut(s)	625
Psp6I	CCWGG	6 cut(s)	356, 655, 829, 936, 963, 1255
PspGI	CCWGG	6 cut(s)	356, 655, 829, 936, 963, 1255
PspN4I	GGNNCC	7 cut(s)	247, 775, 824, 825, 906, 969, 1224
PspOMI	GGGCCC	1 cut(s)	822
PspPI	GGNCC	4 cut(s)	822, 823, 934, 1265
PstI	CTGCAG	1 cut(s)	1477
PstNI	CAGNNNCTG	2 cut(s)	1232, 1673
RruI	TCGCGA	1 cut(s)	86
RsaI	GTAC	6 cut(s)	412, 639, 775, 872, 895, 969
RsaNI	GTAC	6 cut(s)	411, 638, 774, 871, 894, 968
RseI	CAYNNNNRTG	1 cut(s)	234
SacI	GAGCTC	1 cut(s)	625
SalI	GTCGAC	1 cut(s)	152
SapI	GCTCTTC	1 cut(s)	1306
SaqAI	TTAA	2 cut(s)	507, 761
Sau3AI	GATC	9 cut(s)	16, 677, 952, 1102, 1135, 1168, 1234, 1558, 1652
Sau96I	GGNCC	4 cut(s)	822, 823, 934, 1265
SchI	GAGTC	5 cut(s)	143, 159, 170, 1309, 1550
ScrFI	CCNGG	8 cut(s)	115, 358, 657, 831, 882, 938, 965, 1257
SduI	GDGCHC	2 cut(s)	625, 826
SexAI	ACCWGGT	1 cut(s)	963
SfaNI	GCATC	9 cut(s)	460, 776, 799, 1238, 1456, 1487, 1499, 1558, 1603
SfcI	CTRYAG	1 cut(s)	1473
SgrAI	CRCCGGYG	1 cut(s)	38
SmiMI	CAYNNNNRTG	1 cut(s)	234
SmlI	CTYRAG	1 cut(s)	1416
SmoI	CTYRAG	1 cut(s)	1416
Sse9I	AATT	8 cut(s)	288, 326, 379, 708, 725, 817, 843, 1003
SseBI	AGGCCT	1 cut(s)	1287
SsiI	CCGC	8 cut(s)	33, 36, 55, 111, 192, 198, 827, 1268
SspMI	CTAG	2 cut(s)	1215, 1289
SstI	GAGCTC	1 cut(s)	625
StuI	AGGCCT	1 cut(s)	1287
StyD4I	CCNGG	8 cut(s)	113, 356, 655, 829, 880, 936, 963, 1255
TaaI	ACNGT	4 cut(s)	47, 333, 534, 1371
TaqI	TCGA	3 cut(s)	19, 137, 153
TasI	AATT	8 cut(s)	288, 326, 379, 708, 725, 817, 843, 1003
TauI	GCSGC	3 cut(s)	38, 113, 1270
TfiI	GAWTC	1 cut(s)	362
Tru1I	TTAA	2 cut(s)	507, 761
Tru9I	TTAA	2 cut(s)	507, 761
TscAI	CASTG	5 cut(s)	52, 220, 751, 1000, 1281
TseFI	GTSAC	4 cut(s)	121, 1542, 1566, 1628
Tsp45I	GTSAC	4 cut(s)	121, 1542, 1566, 1628
TspDTI	ATGAA	2 cut(s)	557, 750
TspGWI	ACGGA	2 cut(s)	20, 1373
TspRI	CASTG	5 cut(s)	52, 220, 751, 1000, 1281
Van91I	CCANNNNNTGG	2 cut(s)	1199, 1373
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1439
XmiI	GTMKAC	2 cut(s)	153, 186
XspI	CTAG	2 cut(s)	1215, 1289
Zsp2I	ATGCAT	1 cut(s)	792

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.