Rw6G008950

Far upstream element-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0007483
Physical Location & Seq
Reverse (-)
15059118 .. 15063454
4337 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G008950.1

Sequence Viewer

Length: 1683 bp
ATGACGGAAGACAAAGATCGACAGCCGGAAACGGCCGGCGACAGTGCGAAGCGGAAGCTGGAAGACCCCGCCGCCATTAGTATTCTGCTCGCGAAACAGAAAGCTCAGGAAATCGCCGCCCGACTCGTCACCAATGCCGAGTCGAAGCGCCCCCGAGTCGACGACGAGTCCTTCCAACCCAACCCCGTCTACACCCCTCCCGCTTACCCTGTGTTCACTGCACAAACAGGTCACTCTTATGGTTCAGGCACCAGCAAGAAAATAGATATTCCAAATGGGAAGGTTGGTGTAATTATTGGAAAACAAGGAGAAACAATAAGACAACTGCAATTACAGTCAGGGGCCAAAATCCAGATAACCAGGGATTCAGAAGCTGATCTTAATTCTCTAACAAGGGATGTCGAGTTGACGGGTACATCTGAACAGATTAGTAGGGCAGAACAACTTATCAATGATGTAATAGCTGAGGCAGATGCAGGGGGCTCTGCTCCATCTACAAATCAGGGATTTAACTCGATGCAACCTGGAGGGGAACAGTTTGTCATGAAAGTTCCAAATAATAAGGTTGCTTTGATAATTGGCAAGGGGGGTGAGACTATCAGGAATATGCAAACCAAGTCAGGAGCTCGTATTCAGATTGTACCATTGCACCTTCCTCCTGGTGATATGTCAACTGAGAGATCAGTATACATAAATGGAGGGCAAGAGCAAATTGAGGCAGCCAAAGAATTGGTGAACGAAGTAATCAGTGGGAAGCGTTTATTAAATGCCTCTGGAGCCAATAGCTATATGCAGCAGCCATCCTATCCCCCTTCTGGTAACTGGGCCCCGCCAGGACAACCTCCAATTCAGCAACAGCAGCCTCATTATGGGTATACACAACCTGGAGGTTATGGTACACCTCCGGCACCTCCCTCGTACTATGGTAATTATCCGGCCCAGGTAGCAGGTTGGGATCAGTCAAACCAGGTACCTTCTCAACCACCTCAGGATAGCAGTGGGTACAATTATTATGGACAACAACCACCGATGGGGTCAGCTCCCCCAAATCCTGGCTACTACAATCAGACATCTCAGGGTTATGCTCAGCAGCCACCAAATTATGATCAGGGTTATGCTCAGCAGCCACCAAGTTATGATCAGAGTTACGCTCAGCAACCTCCAAGTTACGATCAGAGTTACGCTCAGCAGCCACCAAATTATGGACAAAACATCCCTAGTCAGGCTCCAGCATCTGATCAGCAACAATATGCAACTTCTGGATATGGGCCACCTGCAGTGTCATCAAGCCTAGATGGAAGCTCTTCCGCACAAACGACTCAACCATCTTCTGCCTATGCACCTCCTTACGGCCAGCCAACGGATAACCCTCAGTCTGGGTATTGGTCTCATCCGAGCAGCACAGGCCAACCACACGCTCAAGCAGGCTATTACCAACCAAGTTACGGAGGGCAGCAGCCAGCTGAAGATGCTTCTGCAGCATCATACGGACAAGGTGGGTATGCTCAGCCAGACCCTTCTGCCAATGGAGAGTCACAGCATCAGCCAGAGCAGCAGTCACAGCCCCCTACCAATGGATATGCAGACCAGTCGTCAGCTTCTGAAGCTGAAAGGACTGGTGAGAGGAATGTAGAAGGAGATGGATCAGCCCCTCCAACAGAACCTGTTGGTTCTCAAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000375 GO:0001505 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010586 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010984 GO:0010985 GO:0010988 GO:0010989 GO:0016070 GO:0016071 GO:0017091 GO:0017148 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0034097 GO:0034248 GO:0034249 GO:0034641 GO:0034660 GO:0035925 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043487 GO:0043488 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045019 GO:0045428 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050779 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071345 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1903311 GO:1903313 GO:1903426 GO:1903427 GO:1904406 GO:2000112 GO:2000113 GO:2000377 GO:2000378
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KH_1

Protein Analysis

560

Amino Acids

59.65

Weight (kDa)

4.7

Isoelectric Point (pI)

64.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_1 PF00013 86 - 152 6.1e-17 KH domain
KH_1 PF00013 181 - 247 2.8e-18 KH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1282
Acc36I ACCTGC 2 cut(s) 938, 1282
Acc65I GGTACC 1 cut(s) 970
AccB1I GGYRCC 3 cut(s) 248, 907, 970
AccB7I CCANNNNNTGG 2 cut(s) 1052, 1202
AccI GTMKAC 4 cut(s) 159, 189, 687, 875
AccII CGCG 1 cut(s) 92
AciI CCGC 7 cut(s) 52, 69, 72, 117, 201, 830, 1308
AclWI GGATC 2 cut(s) 963, 1651
AcoI YGGCCR 2 cut(s) 33, 1351
AcuI CTGAAG 2 cut(s) 1485, 1623
AfaI GTAC 6 cut(s) 415, 642, 898, 920, 972, 1004
AhdI GACNNNNNGTC 2 cut(s) 166, 1591
AjnI CCWGG 8 cut(s) 359, 523, 658, 832, 883, 939, 966, 1051
Alw21I GWGCWC 1 cut(s) 628
Alw26I GTCTC 2 cut(s) 587, 1392
AlwI GGATC 2 cut(s) 963, 1651
AlwNI CAGNNNCTG 4 cut(s) 374, 1235, 1601, 1664
Ama87I CYCGRG 1 cut(s) 153
AoxI GGCC 7 cut(s) 33, 342, 825, 936, 1268, 1351, 1405
ApaI GGGCCC 1 cut(s) 829
Asp700I GAANNNNTTC 1 cut(s) 1303
Asp718I GGTACC 1 cut(s) 970
AspLEI GCGC 1 cut(s) 150
AspS9I GGNCC 5 cut(s) 342, 825, 826, 937, 1268
AsuHPI GGTGA 5 cut(s) 121, 602, 674, 745, 1631
AvaI CYCGRG 1 cut(s) 153
AxyI CCTNAGG 1 cut(s) 987
BaeGI GKGCMC 1 cut(s) 829
BanI GGYRCC 3 cut(s) 248, 907, 970
BanII GRGCYC 3 cut(s) 485, 628, 829
BbsI GAAGAC 2 cut(s) 15, 69
Bbv12I GWGCWC 1 cut(s) 628
BbvCI CCTCAGC 1 cut(s) 465
BccI CCATC 6 cut(s) 499, 808, 1024, 1289, 1333, 1634
BceAI ACGGC 2 cut(s) 48, 1366
BcgI CGANNNNNNTGC 4 cut(s) 897, 931, 1572, 1606
BciT130I CCWGG 8 cut(s) 361, 525, 660, 834, 885, 941, 968, 1053
BclI TGATCA 3 cut(s) 1105, 1138, 1237
BcoDI GTCTC 2 cut(s) 587, 1392
BfaI CTAG 2 cut(s) 1218, 1292
BfmI CTRYAG 2 cut(s) 1275, 1476
BfoI RGCGCY 1 cut(s) 151
BfuAI ACCTGC 2 cut(s) 938, 1282
BlpI GCTNAGC 5 cut(s) 1086, 1119, 1152, 1185, 1506
Bme1390I CCNGG 8 cut(s) 361, 525, 660, 834, 885, 941, 968, 1053
BmeRI GACNNNNNGTC 2 cut(s) 166, 1591
BmeT110I CYCGRG 1 cut(s) 153
BmgT120I GGNCC 5 cut(s) 342, 825, 826, 937, 1268
BmiI GGNNCC 8 cut(s) 250, 343, 778, 827, 828, 909, 972, 1227
BmrFI CCNGG 8 cut(s) 361, 525, 660, 834, 885, 941, 968, 1053
BmrI ACTGGG 1 cut(s) 832
BmsI GCATC 6 cut(s) 463, 507, 1241, 1459, 1490, 1549
BmuI ACTGGG 1 cut(s) 832
BpiI GAAGAC 2 cut(s) 15, 69
BplI GAGNNNNNCTC 4 cut(s) 1135, 1167, 1168, 1200
BpmI CTGGAG 4 cut(s) 546, 795, 906, 1212
Bpu10I CCTNAGC 2 cut(s) 105, 465
Bpu1102I GCTNAGC 5 cut(s) 1086, 1119, 1152, 1185, 1506
BpuEI CTTGAG 1 cut(s) 1404
BsaI GGTCTC 1 cut(s) 1392
BsaJI CCNNGG 2 cut(s) 360, 939
Bse118I RCCGGY 1 cut(s) 35
Bse1I ACTGG 3 cut(s) 827, 1588, 1621
Bse21I CCTNAGG 1 cut(s) 987
Bse3DI GCAATG 1 cut(s) 644
BseBI CCWGG 8 cut(s) 361, 525, 660, 834, 885, 941, 968, 1053
BseDI CCNNGG 2 cut(s) 360, 939
BseGI GGATG 4 cut(s) 403, 800, 1212, 1390
BseMI GCAATG 1 cut(s) 644
BseNI ACTGG 3 cut(s) 827, 1588, 1621
BseSI GKGCMC 1 cut(s) 829
BseX3I CGGCCG 1 cut(s) 33
BsgI GTGCAG 1 cut(s) 204
Bsh1236I CGCG 1 cut(s) 92
Bsh1285I CGRYCG 1 cut(s) 36
BshFI GGCC 7 cut(s) 35, 344, 827, 938, 1270, 1353, 1407
BshNI GGYRCC 3 cut(s) 248, 907, 970
BsiEI CGRYCG 1 cut(s) 36
BsiHKAI GWGCWC 1 cut(s) 628
BsiHKCI CYCGRG 1 cut(s) 153
BsiSI CCGG 4 cut(s) 26, 36, 905, 935
BsmAI GTCTC 2 cut(s) 587, 1392
BsnI GGCC 7 cut(s) 35, 344, 827, 938, 1270, 1353, 1407
Bso31I GGTCTC 1 cut(s) 1392
BsoBI CYCGRG 1 cut(s) 153
Bsp120I GGGCCC 1 cut(s) 825
Bsp1286I GDGCHC 3 cut(s) 485, 628, 829
Bsp143I GATC 9 cut(s) 16, 376, 680, 955, 1105, 1138, 1171, 1237, 1643
Bsp1720I GCTNAGC 5 cut(s) 1086, 1119, 1152, 1185, 1506
Bsp68I TCGCGA 1 cut(s) 92
BspACI CCGC 7 cut(s) 52, 69, 72, 117, 201, 830, 1308
BspANI GGCC 7 cut(s) 35, 344, 827, 938, 1270, 1353, 1407
BspFNI CGCG 1 cut(s) 92
BspHI TCATGA 1 cut(s) 543
BspLI GGNNCC 8 cut(s) 250, 343, 778, 827, 828, 909, 972, 1227
BspMAI CTGCAG 2 cut(s) 1279, 1480
BspMI ACCTGC 2 cut(s) 938, 1282
BspPI GGATC 2 cut(s) 963, 1651
BspQI GCTCTTC 1 cut(s) 1309
BspT107I GGYRCC 3 cut(s) 248, 907, 970
BspTNI GGTCTC 1 cut(s) 1392
BsrDI GCAATG 1 cut(s) 644
BsrFI RCCGGY 1 cut(s) 35
BsrI ACTGG 3 cut(s) 827, 1588, 1621
BssAI RCCGGY 1 cut(s) 35
BssECI CCNNGG 2 cut(s) 360, 939
BssMI GATC 9 cut(s) 16, 376, 680, 955, 1105, 1138, 1171, 1237, 1643
BssNAI GTATAC 2 cut(s) 688, 876
Bst1107I GTATAC 2 cut(s) 688, 876
Bst2UI CCWGG 8 cut(s) 361, 525, 660, 834, 885, 941, 968, 1053
Bst4CI ACNGT 3 cut(s) 44, 336, 537
Bst6I CTCTTC 1 cut(s) 1309
BstC8I GCNNGC 5 cut(s) 37, 90, 1355, 1426, 1461
BstF5I GGATG 4 cut(s) 403, 800, 1212, 1390
BstFNI CGCG 1 cut(s) 92
BstH2I RGCGCY 1 cut(s) 151
BstHHI GCGC 1 cut(s) 150
BstKTI GATC 9 cut(s) 19, 379, 683, 958, 1108, 1141, 1174, 1240, 1646
BstMAI GTCTC 2 cut(s) 587, 1392
BstMBI GATC 9 cut(s) 16, 376, 680, 955, 1105, 1138, 1171, 1237, 1643
BstMCI CGRYCG 1 cut(s) 36
BstMWI GCNNNNNNNGC 9 cut(s) 776, 859, 944, 1404, 1469, 1478, 1552, 1561, 1604
BstNI CCWGG 8 cut(s) 361, 525, 660, 834, 885, 941, 968, 1053
BstSCI CCNGG 8 cut(s) 359, 523, 658, 832, 883, 939, 966, 1051
BstSFI CTRYAG 2 cut(s) 1275, 1476
BstSLI GKGCMC 1 cut(s) 829
BstUI CGCG 1 cut(s) 92
BstV2I GAAGAC 2 cut(s) 15, 69
BstXI CCANNNNNNTGG 1 cut(s) 730
BstZ17I GTATAC 2 cut(s) 688, 876
BstZI CGGCCG 1 cut(s) 33
Bsu36I CCTNAGG 1 cut(s) 987
BsuRI GGCC 7 cut(s) 35, 344, 827, 938, 1270, 1353, 1407
BtsCI GGATG 4 cut(s) 403, 800, 1212, 1390
BtsI GCAGTG 3 cut(s) 216, 1003, 1284
BtsIMutI CAGTG 5 cut(s) 49, 216, 754, 1003, 1284
BtuMI TCGCGA 1 cut(s) 92
BveI ACCTGC 2 cut(s) 938, 1282
Cac8I GCNNGC 5 cut(s) 37, 90, 1355, 1426, 1461
CaiI CAGNNNCTG 4 cut(s) 374, 1235, 1601, 1664
CciI TCATGA 1 cut(s) 543
CfoI GCGC 1 cut(s) 150
Cfr10I RCCGGY 1 cut(s) 35
Cfr13I GGNCC 5 cut(s) 342, 825, 826, 937, 1268
CsiI ACCWGGT 1 cut(s) 966
Csp6I GTAC 6 cut(s) 414, 641, 897, 919, 971, 1003
CviAII CATG 1 cut(s) 544
CviQI GTAC 6 cut(s) 414, 641, 897, 919, 971, 1003
DpnI GATC 9 cut(s) 18, 378, 682, 957, 1107, 1140, 1173, 1239, 1645
DpnII GATC 9 cut(s) 16, 376, 680, 955, 1105, 1138, 1171, 1237, 1643
DriI GACNNNNNGTC 2 cut(s) 166, 1591
EaeI YGGCCR 2 cut(s) 33, 1351
EagI CGGCCG 1 cut(s) 33
Eam1104I CTCTTC 1 cut(s) 1309
Eam1105I GACNNNNNGTC 2 cut(s) 166, 1591
EarI CTCTTC 1 cut(s) 1309
Ecl136II GAGCTC 1 cut(s) 626
EclXI CGGCCG 1 cut(s) 33
Eco24I GRGCYC 3 cut(s) 485, 628, 829
Eco31I GGTCTC 1 cut(s) 1392
Eco52I CGGCCG 1 cut(s) 33
Eco53kI GAGCTC 1 cut(s) 626
Eco57I CTGAAG 2 cut(s) 1485, 1623
Eco81I CCTNAGG 1 cut(s) 987
Eco88I CYCGRG 1 cut(s) 153
EcoICRI GAGCTC 1 cut(s) 626
EcoO109I RGGNCCY 1 cut(s) 826
EcoRII CCWGG 8 cut(s) 359, 523, 658, 832, 883, 939, 966, 1051
EcoT38I GRGCYC 3 cut(s) 485, 628, 829
FaeI CATG 1 cut(s) 547
FalI AAGNNNNNCTT 2 cut(s) 363, 395
FatI CATG 1 cut(s) 543
FauI CCCGC 3 cut(s) 76, 208, 837
FbaI TGATCA 3 cut(s) 1105, 1138, 1237
FblI GTMKAC 4 cut(s) 159, 189, 687, 875
FokI GGATG 4 cut(s) 410, 787, 1199, 1377
FriOI GRGCYC 3 cut(s) 485, 628, 829
FspBI CTAG 2 cut(s) 1218, 1292
GlaI GCGC 1 cut(s) 149
GsuI CTGGAG 4 cut(s) 546, 795, 906, 1212
HaeII RGCGCY 1 cut(s) 151
HaeIII GGCC 7 cut(s) 35, 344, 827, 938, 1270, 1353, 1407
HapII CCGG 4 cut(s) 26, 36, 905, 935
HhaI GCGC 1 cut(s) 150
Hin1II CATG 1 cut(s) 547
Hin6I GCGC 1 cut(s) 148
HinP1I GCGC 1 cut(s) 148
HincII GTYRAC 3 cut(s) 160, 408, 672
HindII GTYRAC 3 cut(s) 160, 408, 672
HinfI GANTC 7 cut(s) 123, 140, 156, 167, 365, 1318, 1532
HpaII CCGG 4 cut(s) 26, 36, 905, 935
HphI GGTGA 5 cut(s) 121, 602, 674, 745, 1631
Hpy166II GTNNAC 9 cut(s) 160, 190, 216, 408, 672, 688, 736, 876, 899
Hpy188I TCNGA 9 cut(s) 370, 421, 636, 1068, 1143, 1176, 1237, 1395, 1603
Hpy188III TCNNGA 9 cut(s) 91, 107, 352, 544, 601, 621, 774, 989, 1260
Hpy8I GTNNAC 9 cut(s) 160, 190, 216, 408, 672, 688, 736, 876, 899
Hpy99I CGWCG 2 cut(s) 164, 167
HpyAV CCTTC 7 cut(s) 181, 274, 662, 822, 984, 1527, 1628
HpyCH4III ACNGT 3 cut(s) 44, 336, 537
HpyF10VI GCNNNNNNNGC 9 cut(s) 776, 859, 944, 1404, 1469, 1478, 1552, 1561, 1604
Hsp92II CATG 1 cut(s) 547
HspAI GCGC 1 cut(s) 148
KpnI GGTACC 1 cut(s) 974
KroI GCCGGC 1 cut(s) 35
KroNI GCCGGC 1 cut(s) 37
Ksp22I TGATCA 3 cut(s) 1105, 1138, 1237
Kzo9I GATC 9 cut(s) 16, 376, 680, 955, 1105, 1138, 1171, 1237, 1643
LguI GCTCTTC 1 cut(s) 1309
LmnI GCTCC 5 cut(s) 493, 623, 776, 1045, 1231
LweI GCATC 6 cut(s) 463, 507, 1241, 1459, 1490, 1549
MabI ACCWGGT 1 cut(s) 966
MaeI CTAG 2 cut(s) 1218, 1292
MaeIII GTNAC 9 cut(s) 127, 230, 818, 1145, 1166, 1178, 1442, 1533, 1557
MalI GATC 9 cut(s) 18, 378, 682, 957, 1107, 1140, 1173, 1239, 1645
MboI GATC 9 cut(s) 16, 376, 680, 955, 1105, 1138, 1171, 1237, 1643
MboII GAAGA 5 cut(s) 20, 74, 1296, 1320, 1478
MhlI GDGCHC 3 cut(s) 485, 628, 829
MlyI GAGTC 6 cut(s) 117, 149, 165, 176, 1312, 1541
MmeI TCCRAC 2 cut(s) 199, 1679
MroNI GCCGGC 1 cut(s) 35
MroXI GAANNNNTTC 1 cut(s) 1303
MseI TTAA 3 cut(s) 381, 510, 764
MslI CAYNNNNRTG 1 cut(s) 237
MspA1I CMGCKG 1 cut(s) 1463
MspI CCGG 4 cut(s) 26, 36, 905, 935
MspR9I CCNGG 8 cut(s) 361, 525, 660, 834, 885, 941, 968, 1053
MvaI CCWGG 8 cut(s) 361, 525, 660, 834, 885, 941, 968, 1053
MvnI CGCG 1 cut(s) 92
MwoI GCNNNNNNNGC 9 cut(s) 776, 859, 944, 1404, 1469, 1478, 1552, 1561, 1604
NaeI GCCGGC 1 cut(s) 37
NdeII GATC 9 cut(s) 16, 376, 680, 955, 1105, 1138, 1171, 1237, 1643
NgoMIV GCCGGC 1 cut(s) 35
NlaIII CATG 1 cut(s) 547
NlaIV GGNNCC 8 cut(s) 250, 343, 778, 827, 828, 909, 972, 1227
NmeAIII GCCGAG 1 cut(s) 163
NmuCI GTSAC 4 cut(s) 127, 230, 1533, 1557
NruI TCGCGA 1 cut(s) 92
PagI TCATGA 1 cut(s) 543
PaqCI CACCTGC 1 cut(s) 1282
PciSI GCTCTTC 1 cut(s) 1309
PdiI GCCGGC 1 cut(s) 37
PdmI GAANNNNTTC 1 cut(s) 1303
PfeI GAWTC 1 cut(s) 365
PflMI CCANNNNNTGG 2 cut(s) 1052, 1202
PleI GAGTC 6 cut(s) 117, 148, 164, 175, 1312, 1540
PpsI GAGTC 6 cut(s) 117, 148, 164, 175, 1312, 1540
Psp124BI GAGCTC 1 cut(s) 628
Psp6I CCWGG 8 cut(s) 359, 523, 658, 832, 883, 939, 966, 1051
PspGI CCWGG 8 cut(s) 359, 523, 658, 832, 883, 939, 966, 1051
PspN4I GGNNCC 8 cut(s) 250, 343, 778, 827, 828, 909, 972, 1227
PspOMI GGGCCC 1 cut(s) 825
PspPI GGNCC 5 cut(s) 342, 825, 826, 937, 1268
PstI CTGCAG 2 cut(s) 1279, 1480
PstNI CAGNNNCTG 4 cut(s) 374, 1235, 1601, 1664
PvuII CAGCTG 1 cut(s) 1463
RruI TCGCGA 1 cut(s) 92
RsaI GTAC 6 cut(s) 415, 642, 898, 920, 972, 1004
RsaNI GTAC 6 cut(s) 414, 641, 897, 919, 971, 1003
RseI CAYNNNNRTG 1 cut(s) 237
SacI GAGCTC 1 cut(s) 628
SalI GTCGAC 1 cut(s) 158
SapI GCTCTTC 1 cut(s) 1309
SaqAI TTAA 3 cut(s) 381, 510, 764
Sau3AI GATC 9 cut(s) 16, 376, 680, 955, 1105, 1138, 1171, 1237, 1643
Sau96I GGNCC 5 cut(s) 342, 825, 826, 937, 1268
SchI GAGTC 6 cut(s) 117, 149, 165, 176, 1312, 1541
ScrFI CCNGG 8 cut(s) 361, 525, 660, 834, 885, 941, 968, 1053
SduI GDGCHC 3 cut(s) 485, 628, 829
SexAI ACCWGGT 1 cut(s) 966
SfaNI GCATC 6 cut(s) 463, 507, 1241, 1459, 1490, 1549
SfcI CTRYAG 2 cut(s) 1275, 1476
SmiMI CAYNNNNRTG 1 cut(s) 237
SmlI CTYRAG 1 cut(s) 1419
SmoI CTYRAG 1 cut(s) 1419
SsiI CCGC 7 cut(s) 52, 69, 72, 117, 201, 830, 1308
SspMI CTAG 2 cut(s) 1218, 1292
SstI GAGCTC 1 cut(s) 628
StyD4I CCNGG 8 cut(s) 359, 523, 658, 832, 883, 939, 966, 1051
TaaI ACNGT 3 cut(s) 44, 336, 537
TaqI TCGA 5 cut(s) 19, 143, 159, 402, 515
TauI GCSGC 2 cut(s) 74, 119
TfiI GAWTC 1 cut(s) 365
Tru1I TTAA 3 cut(s) 381, 510, 764
Tru9I TTAA 3 cut(s) 381, 510, 764
TscAI CASTG 5 cut(s) 49, 223, 754, 1003, 1284
TseFI GTSAC 4 cut(s) 127, 230, 1533, 1557
Tsp45I GTSAC 4 cut(s) 127, 230, 1533, 1557
TspDTI ATGAA 1 cut(s) 560
TspGWI ACGGA 4 cut(s) 20, 1376, 1461, 1503
TspRI CASTG 5 cut(s) 49, 223, 754, 1003, 1284
Van91I CCANNNNNTGG 2 cut(s) 1052, 1202
XmiI GTMKAC 4 cut(s) 159, 189, 687, 875
XmnI GAANNNNTTC 1 cut(s) 1303
XspI CTAG 2 cut(s) 1218, 1292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.