FvH4_2g11920

zinc finger

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
10389661 .. 10394293
4633 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g11920.t2

Sequence Viewer

Length: 2463 bp
ATGGCGGCTATGGCGCTACCTCAGGGAAGCACAAGCCTTCCCTTAGAGTGTGTGACGCATATTGACATAAGCACCCTGTCTCAGTCGGAGCTCCTCGCTCTATCTCTCTTCTCCTTGACCCGCTCAAACGGCGCCATCGACCACCTGGTGGTCCCCAAAATCGACCGATCTCAATTCAATGAGAGTGCCGGGTCCCGCCGCCAGACCTACTCTAGAGTCCGGCGGCGCGTGGCGGGCCTGCTCTCTAATCCGAAAGTATCAGCACCCCCGGCCCAGCCTGACGACCCGGAACGCAACGAGAACCAGGCCATCATCGGCCACCTGAAGCGCTTCATTTCCCAGGATCCCAAATTCGACCAAATCGACTTGGAGCCCAGCCCGATGACGATGAAGGCATCCTTGTCTGGAATGGCGGAATTAGAAAGGAGGAAGAGGAAGCGGGGGAGGAAGCCGAAAGCGAAAGGGTCGAGTGGTGGCGAGGGGCTCATTGTGAACAAGAATGGCGCTGCAGTCGACATCTGGGCTCTGCAGAATTCGGAGAACCCCTTTGGGGATGAGTTGAGGAGGAGGACTTTGGGTTTGGAGACTGAGGAGGAGTTGTTGGGTTTCATGAGGGACTTGGGTGGCCAGTGGGGGAGCAGGAGGAAGAAGAGGAAGATTGTTGACGCCACTGAATTCGGGGATGCCTTGCCCCTCGGTTGGAAGCTCTTGCTCGGCCTCAAGCGCAAGGAACGCCGCGCTTGGATTTACTGCCGCCGATATATTAGCCCTACTGGACAACAATTTCTGTCCTGCAAGGAAGTTGCTTCTTTTTTGGAGTCCTTCTTCAGTCTTAATAATGCTGATAGGCATGATGGTGATGGTGGCGAGAACATTCAGGAGGACCGCATAGTGGCTACCGAAAATCATGCTGATAAAGATGGAGAAAAAAGGCAAGATGTGAGCTTTAACTCTGGTATACTGGGGTCATCTATATCTAATGAGCAATCTAATGAGCCCGAGAAGAAAGTTAGCATATCGGAAATGGAGAATCTTGCTGAGGTTCAGATACATAACCTTTTTGAATGTCACAAATGCAGTATGACTTTTGCCGATAAGGATTCATATTTGCAGCATCTGTTGTCCTTTCACCAGAGGACTACAAGGAGGTATAGACTTGGTTCGACAGTTGGGGATGGTGTGATTATTAAGGATGGGAAATATGAGTGCCAGTTCTGCCATAAGGTATTTCTGGAAAGGCGTCGCTATAATGGGCATGTAGGAATCCATGTTCGAAATTATGTGAGGAGGGTCGAAGAGTCACCAGGTCCAACAACTCTTCAAAAGAAAATAGAGTCTCCAACAAGGGAAGATTTGCCATCAAGGAATTCTAAAATGGACGCTTTGATTGAAATTGCTCAAAACTCTATCCTTGAAACCTCCACTGCTGGACCCAGTAAGGAATTAAAAGGTTGTGCTGCACCAGATCCATACATCAATATTAGTTCAGAAATTCCTGCTTCCCCTTCTCACAGAGAAATGAATATAGAATCTAAACTGACAGAACACAACATGGAAGATCTTATGATCGAAGGAATTAATGAAGATGAGCTGGAGAGTGATCATACAATGACTGATGGAAGTATGGAGGAAGCTGTGGATGCTGCAGAAGCTGTCGATTCTACGGAAGTTGTCGATGCTATGGAAGTTGCAAATGTTCAGATGAATTCTTGTTTGGTTACAACTGCGTTATCTGCTGAAGAGAAAAACGGGAAGACATCTGAAAGTTCTGTGGAGAAAAATGGTTTAGCATCCACTTCTGGTGAATTAGAGATGTCTGGCACCAAGCAAGAGAATGTTTCTGTATGTCACCATGTACATGGTCCTTCAAATAATCAATCTGCTAGTGATGTTGCAGACAATGTAAAATATGCAAGTGCATTAGAGCATCCCAGTCCAGTTGAAGTCAATAAACAAAAGCATACTGAATCAATTGGTAGCTTCAATCAACCTTGTCCAGCTAATAATTGTTCCTTGGGGTTTCATGCCTCTAACAGAAATGAACTACAAACTGGGATTTGTGACACCTCAATGTCACTGGTGCCACCTTTGCTCTGTCCTCCCACATCCAATACAATTCTGCAAAAGGGAGATGAACATGTTATTGGTGTTGACCAGAGAGATGACCATGTAATGGGTCTAGAGGATCTGCAACAAAATGAGATAGAACATCTGAAGCATGGTTCTGCTTCTGTGCAAGAATCTCTTACACTGGAGGAGGTATCGATGGATATGTCAAATAGTTCAGAGATGCAGAGATCAGTTGAAGTCATGCTAAACATGGCTGGCAGCAATCAGCTTACAACTGCTTGTGTCTGGTGTGGAGTAGAGTTCAAACATGAGGCTGTGGATTACGAGGTACAACACGGTTCTGTTGGCTTTATGTGTCCAGTGTGCAAGGCAAATATTTCTGAACGTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

821

Amino Acids

90.75

Weight (kDa)

5.41

Isoelectric Point (pI)

59.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 131, 1820, 2080
AccB7I CCANNNNNTGG 2 cut(s) 148, 2173
AccBSI CCGCTC 1 cut(s) 123
AccI GTMKAC 2 cut(s) 513, 958
AccII CGCG 2 cut(s) 228, 738
AclWI GGATC 4 cut(s) 338, 351, 1460, 2193
AcoI YGGCCR 2 cut(s) 316, 625
AcsI RAATTY 6 cut(s) 350, 532, 674, 1366, 1491, 1705
AcuI CTGAAG 4 cut(s) 344, 811, 1758, 2234
AcyI GRCGYC 3 cut(s) 132, 666, 1240
AdeI CACNNNGTG 1 cut(s) 148
AfaI GTAC 2 cut(s) 1857, 2400
AfeI AGCGCT 1 cut(s) 329
AfiI CCNNNNNNNGG 5 cut(s) 148, 550, 699, 892, 2173
AflIII ACRYGT 1 cut(s) 2137
AjnI CCWGG 4 cut(s) 144, 303, 339, 1303
AjuI GAANNNNNNNTTGG 4 cut(s) 1697, 1729, 2127, 2159
AloI GAACNNNNNNTCC 2 cut(s) 1254, 1286
AluBI AGCT 9 cut(s) 91, 706, 945, 1591, 1634, 1652, 1980, 2000, 2338
AluI AGCT 9 cut(s) 91, 706, 945, 1591, 1634, 1652, 1980, 2000, 2338
Alw21I GWGCWC 1 cut(s) 93
Alw26I GTCTC 3 cut(s) 84, 578, 1341
AlwI GGATC 4 cut(s) 338, 351, 1460, 2193
AlwNI CAGNNNCTG 2 cut(s) 1117, 1652
Ama87I CYCGRG 1 cut(s) 998
Aor51HI AGCGCT 1 cut(s) 329
AoxI GGCC 6 cut(s) 235, 270, 306, 316, 625, 715
ApeKI GCWGC 5 cut(s) 506, 1111, 1457, 1643, 2328
ApoI RAATTY 6 cut(s) 350, 532, 674, 1366, 1491, 1705
ArsI GACNNNNNNTTYG 2 cut(s) 562, 594
AseI ATTAAT 1 cut(s) 1578
Asp700I GAANNNNTTC 1 cut(s) 329
AspLEI GCGC 7 cut(s) 16, 134, 228, 330, 506, 726, 740
AspS9I GGNCC 8 cut(s) 151, 192, 235, 271, 883, 1307, 1430, 1862
AsuC2I CCSGG 3 cut(s) 190, 269, 287
AsuHPI GGTGA 5 cut(s) 869, 1121, 1293, 1814, 1841
AsuII TTCGAA 1 cut(s) 1273
AvaI CYCGRG 1 cut(s) 998
AvaII GGWCC 6 cut(s) 151, 192, 883, 1307, 1430, 1862
AxyI CCTNAGG 1 cut(s) 21
BalI TGGCCA 1 cut(s) 627
BamHI GGATCC 1 cut(s) 343
BanI GGYRCC 3 cut(s) 131, 1820, 2080
BanII GRGCYC 5 cut(s) 93, 375, 486, 526, 999
BbsI GAAGAC 1 cut(s) 1760
Bbv12I GWGCWC 1 cut(s) 93
BbvCI CCTCAGC 1 cut(s) 1038
BbvI GCAGC 5 cut(s) 493, 1123, 1444, 1630, 2340
BceAI ACGGC 1 cut(s) 145
BcgI CGANNNNNNTGC 2 cut(s) 890, 924
BciT130I CCWGG 4 cut(s) 146, 305, 341, 1305
BclI TGATCA 1 cut(s) 1600
BcnI CCSGG 3 cut(s) 190, 269, 287
BcoDI GTCTC 3 cut(s) 84, 578, 1341
BfaI CTAG 3 cut(s) 213, 1884, 2180
BfmI CTRYAG 3 cut(s) 507, 527, 1644
BfoI RGCGCY 4 cut(s) 17, 135, 331, 507
BglII AGATCT 1 cut(s) 1558
Bme1390I CCNGG 7 cut(s) 146, 190, 269, 287, 305, 341, 1305
Bme18I GGWCC 6 cut(s) 151, 192, 883, 1307, 1430, 1862
BmeT110I CYCGRG 1 cut(s) 998
BmgT120I GGNCC 8 cut(s) 151, 192, 235, 271, 883, 1307, 1430, 1862
BmiI GGNNCC 9 cut(s) 133, 153, 193, 194, 345, 372, 1432, 1822, 2082
BmrFI CCNGG 7 cut(s) 146, 190, 269, 287, 305, 341, 1305
BmrI ACTGGG 4 cut(s) 971, 1428, 1926, 2061
BmsI GCATC 8 cut(s) 404, 673, 1123, 1630, 1666, 1799, 1936, 2280
BmuI ACTGGG 4 cut(s) 971, 1428, 1926, 2061
BpiI GAAGAC 1 cut(s) 1760
BpmI CTGGAG 2 cut(s) 1613, 2273
Bpu10I CCTNAGC 1 cut(s) 1038
Bpu14I TTCGAA 1 cut(s) 1273
BpuEI CTTGAG 1 cut(s) 704
BpuMI CCSGG 3 cut(s) 190, 269, 287
Bsa29I ATCGAT 1 cut(s) 2264
BsaHI GRCGYC 3 cut(s) 132, 666, 1240
BsaJI CCNNGG 4 cut(s) 267, 339, 694, 2013
BsaXI ACNNNNNCTCC 2 cut(s) 584, 614
Bsc4I CCNNNNNNNGG 5 cut(s) 148, 550, 699, 892, 2173
Bse21I CCTNAGG 1 cut(s) 21
BseBI CCWGG 4 cut(s) 146, 305, 341, 1305
BseCI ATCGAT 1 cut(s) 2264
BseDI CCNNGG 4 cut(s) 267, 339, 694, 2013
BseGI GGATG 9 cut(s) 395, 559, 688, 1180, 1198, 1645, 1790, 1927, 2105
BseLI CCNNNNNNNGG 5 cut(s) 148, 550, 699, 892, 2173
BseMII CTCAG 4 cut(s) 35, 95, 579, 1029
BseRI GAGGAG 7 cut(s) 83, 577, 580, 605, 608, 1300, 2270
BseXI GCAGC 5 cut(s) 493, 1123, 1444, 1630, 2340
BseYI CCCAGC 2 cut(s) 273, 374
BsgI GTGCAG 1 cut(s) 1443
Bsh1236I CGCG 2 cut(s) 228, 738
Bsh1285I CGRYCG 1 cut(s) 166
BshFI GGCC 6 cut(s) 237, 272, 308, 318, 627, 717
BshNI GGYRCC 3 cut(s) 131, 1820, 2080
BshVI ATCGAT 1 cut(s) 2264
BsiEI CGRYCG 1 cut(s) 166
BsiHKAI GWGCWC 1 cut(s) 93
BsiHKCI CYCGRG 1 cut(s) 998
BsiSI CCGG 4 cut(s) 189, 220, 269, 287
BslFI GGGAC 3 cut(s) 137, 178, 629
BslI CCNNNNNNNGG 5 cut(s) 148, 550, 699, 892, 2173
BsmAI GTCTC 3 cut(s) 84, 578, 1341
BsmFI GGGAC 3 cut(s) 137, 178, 629
BsnI GGCC 6 cut(s) 237, 272, 308, 318, 627, 717
BsoBI CYCGRG 1 cut(s) 998
Bsp119I TTCGAA 1 cut(s) 1273
Bsp1286I GDGCHC 5 cut(s) 93, 375, 486, 526, 999
Bsp1407I TGTACA 1 cut(s) 1855
Bsp143I GATC 8 cut(s) 167, 343, 1465, 1558, 1566, 1600, 2185, 2297
BspANI GGCC 6 cut(s) 237, 272, 308, 318, 627, 717
BspCNI CTCAG 4 cut(s) 34, 94, 580, 1030
BspDI ATCGAT 1 cut(s) 2264
BspFNI CGCG 2 cut(s) 228, 738
BspHI TCATGA 1 cut(s) 609
BspLI GGNNCC 9 cut(s) 133, 153, 193, 194, 345, 372, 1432, 1822, 2082
BspMAI CTGCAG 3 cut(s) 511, 531, 1648
BspPI GGATC 4 cut(s) 338, 351, 1460, 2193
BspT104I TTCGAA 1 cut(s) 1273
BspT107I GGYRCC 3 cut(s) 131, 1820, 2080
BsrBI CCGCTC 1 cut(s) 123
BsrGI TGTACA 1 cut(s) 1855
BssECI CCNNGG 4 cut(s) 267, 339, 694, 2013
BssMI GATC 8 cut(s) 167, 343, 1465, 1558, 1566, 1600, 2185, 2297
BssNAI GTATAC 1 cut(s) 959
BssNI GRCGYC 3 cut(s) 132, 666, 1240
BssT1I CCWWGG 1 cut(s) 2013
Bst1107I GTATAC 1 cut(s) 959
Bst2UI CCWGG 4 cut(s) 146, 305, 341, 1305
Bst4CI ACNGT 2 cut(s) 1168, 2408
Bst6I CTCTTC 6 cut(s) 113, 425, 644, 1290, 1323, 1734
BstACI GRCGYC 3 cut(s) 132, 666, 1240
BstAUI TGTACA 1 cut(s) 1855
BstBI TTCGAA 1 cut(s) 1273
BstC8I GCNNGC 3 cut(s) 235, 239, 2326
BstDEI CTNAG 5 cut(s) 21, 43, 81, 588, 1038
BstF5I GGATG 9 cut(s) 395, 559, 688, 1180, 1198, 1645, 1790, 1927, 2105
BstFNI CGCG 2 cut(s) 228, 738
BstH2I RGCGCY 4 cut(s) 17, 135, 331, 507
BstHHI GCGC 7 cut(s) 16, 134, 228, 330, 506, 726, 740
BstKTI GATC 8 cut(s) 170, 346, 1468, 1561, 1569, 1603, 2188, 2300
BstMAI GTCTC 3 cut(s) 84, 578, 1341
BstMBI GATC 8 cut(s) 167, 343, 1465, 1558, 1566, 1600, 2185, 2297
BstMCI CGRYCG 1 cut(s) 166
BstNI CCWGG 4 cut(s) 146, 305, 341, 1305
BstNSI RCATGY 2 cut(s) 1259, 2141
BstSCI CCNGG 7 cut(s) 144, 188, 267, 285, 303, 339, 1303
BstSFI CTRYAG 3 cut(s) 507, 527, 1644
BstUI CGCG 2 cut(s) 228, 738
BstV1I GCAGC 5 cut(s) 493, 1123, 1444, 1630, 2340
BstV2I GAAGAC 1 cut(s) 1760
BstX2I RGATCY 4 cut(s) 343, 1465, 1558, 2185
BstXI CCANNNNNNTGG 1 cut(s) 1859
BstYI RGATCY 4 cut(s) 343, 1465, 1558, 2185
BstZ17I GTATAC 1 cut(s) 959
Bsu15I ATCGAT 1 cut(s) 2264
Bsu36I CCTNAGG 1 cut(s) 21
BsuRI GGCC 6 cut(s) 237, 272, 308, 318, 627, 717
BsuTUI ATCGAT 1 cut(s) 2264
BtsCI GGATG 9 cut(s) 395, 559, 688, 1180, 1198, 1645, 1790, 1927, 2105
BtsI GCAGTG 1 cut(s) 1422
BtsIMutI CAGTG 6 cut(s) 635, 669, 1422, 2075, 2249, 2436
Cac8I GCNNGC 3 cut(s) 235, 239, 2326
CaiI CAGNNNCTG 2 cut(s) 1117, 1652
CciI TCATGA 1 cut(s) 609
CfoI GCGC 7 cut(s) 16, 134, 228, 330, 506, 726, 740
Cfr13I GGNCC 8 cut(s) 151, 192, 235, 271, 883, 1307, 1430, 1862
ClaI ATCGAT 1 cut(s) 2264
CseI GACGC 4 cut(s) 64, 674, 1229, 1388
CsiI ACCWGGT 2 cut(s) 144, 1303
Csp6I GTAC 2 cut(s) 1856, 2399
CviQI GTAC 2 cut(s) 1856, 2399
DdeI CTNAG 5 cut(s) 21, 43, 81, 588, 1038
DinI GGCGCC 1 cut(s) 133
DpnI GATC 8 cut(s) 169, 345, 1467, 1560, 1568, 1602, 2187, 2299
DpnII GATC 8 cut(s) 167, 343, 1465, 1558, 1566, 1600, 2185, 2297
DraIII CACNNNGTG 1 cut(s) 148
EaeI YGGCCR 2 cut(s) 316, 625
Eam1104I CTCTTC 6 cut(s) 113, 425, 644, 1290, 1323, 1734
EarI CTCTTC 6 cut(s) 113, 425, 644, 1290, 1323, 1734
EciI GGCGGA 1 cut(s) 428
Ecl136II GAGCTC 1 cut(s) 91
Eco130I CCWWGG 1 cut(s) 2013
Eco24I GRGCYC 5 cut(s) 93, 375, 486, 526, 999
Eco47I GGWCC 6 cut(s) 151, 192, 883, 1307, 1430, 1862
Eco47III AGCGCT 1 cut(s) 329
Eco53kI GAGCTC 1 cut(s) 91
Eco57I CTGAAG 4 cut(s) 344, 811, 1758, 2234
Eco81I CCTNAGG 1 cut(s) 21
Eco88I CYCGRG 1 cut(s) 998
EcoICRI GAGCTC 1 cut(s) 91
EcoO109I RGGNCCY 1 cut(s) 192
EcoRI GAATTC 4 cut(s) 532, 674, 1366, 1705
EcoRII CCWGG 4 cut(s) 144, 303, 339, 1303
EcoT14I CCWWGG 1 cut(s) 2013
EcoT38I GRGCYC 5 cut(s) 93, 375, 486, 526, 999
EgeI GGCGCC 1 cut(s) 133
EheI GGCGCC 1 cut(s) 133
ErhI CCWWGG 1 cut(s) 2013
FalI AAGNNNNNCTT 4 cut(s) 383, 415, 2229, 2261
FaqI GGGAC 3 cut(s) 137, 178, 629
FauI CCCGC 4 cut(s) 128, 203, 226, 432
FbaI TGATCA 1 cut(s) 1600
FblI GTMKAC 2 cut(s) 513, 958
FokI GGATG 9 cut(s) 382, 566, 695, 1187, 1205, 1652, 1777, 1914, 2092
FriOI GRGCYC 5 cut(s) 93, 375, 486, 526, 999
FspBI CTAG 3 cut(s) 213, 1884, 2180
GlaI GCGC 7 cut(s) 15, 133, 227, 329, 505, 725, 739
GsaI CCCAGC 2 cut(s) 277, 378
GsuI CTGGAG 2 cut(s) 1613, 2273
HaeII RGCGCY 4 cut(s) 17, 135, 331, 507
HaeIII GGCC 6 cut(s) 237, 272, 308, 318, 627, 717
HapII CCGG 4 cut(s) 189, 220, 269, 287
HgaI GACGC 4 cut(s) 64, 674, 1229, 1388
HhaI GCGC 7 cut(s) 16, 134, 228, 330, 506, 726, 740
Hin1I GRCGYC 3 cut(s) 132, 666, 1240
Hin6I GCGC 7 cut(s) 14, 132, 226, 328, 504, 724, 738
HinP1I GCGC 7 cut(s) 14, 132, 226, 328, 504, 724, 738
HincII GTYRAC 3 cut(s) 514, 664, 2152
HindII GTYRAC 3 cut(s) 514, 664, 2152
HpaII CCGG 4 cut(s) 189, 220, 269, 287
HphI GGTGA 5 cut(s) 869, 1121, 1293, 1814, 1841
Hpy166II GTNNAC 5 cut(s) 493, 514, 664, 959, 2152
Hpy188III TCNNGA 6 cut(s) 213, 405, 610, 878, 1232, 2180
Hpy8I GTNNAC 5 cut(s) 493, 514, 664, 959, 2152
Hpy99I CGWCG 1 cut(s) 1245
HpyAV CCTTC 6 cut(s) 47, 385, 832, 1515, 1565, 1875
HpyCH4III ACNGT 2 cut(s) 1168, 2408
HpyCH4IV ACGT 1 cut(s) 2455
HpyF3I CTNAG 5 cut(s) 21, 43, 81, 588, 1038
HpySE526I ACGT 1 cut(s) 2455
Hsp92I GRCGYC 3 cut(s) 132, 666, 1240
HspAI GCGC 7 cut(s) 14, 132, 226, 328, 504, 724, 738
KasI GGCGCC 1 cut(s) 131
KflI GGGWCCC 1 cut(s) 192
Ksp22I TGATCA 1 cut(s) 1600
Kzo9I GATC 8 cut(s) 167, 343, 1465, 1558, 1566, 1600, 2185, 2297
LmnI GCTCC 4 cut(s) 88, 96, 370, 636
Lsp1109I GCAGC 5 cut(s) 493, 1123, 1444, 1630, 2340
LweI GCATC 8 cut(s) 404, 673, 1123, 1630, 1666, 1799, 1936, 2280
MabI ACCWGGT 2 cut(s) 144, 1303
MaeI CTAG 3 cut(s) 213, 1884, 2180
MaeII ACGT 1 cut(s) 2455
MaeIII GTNAC 7 cut(s) 52, 1067, 1299, 1717, 1847, 2060, 2073
MalI GATC 8 cut(s) 169, 345, 1467, 1560, 1568, 1602, 2187, 2299
MbiI CCGCTC 1 cut(s) 123
MboI GATC 8 cut(s) 167, 343, 1465, 1558, 1566, 1600, 2185, 2297
MfeI CAATTG 1 cut(s) 1971
MflI RGATCY 4 cut(s) 343, 1465, 1558, 2185
MhlI GDGCHC 5 cut(s) 93, 375, 486, 526, 999
MlsI TGGCCA 1 cut(s) 627
MluNI TGGCCA 1 cut(s) 627
Mly113I GGCGCC 1 cut(s) 132
MlyI GAGTC 4 cut(s) 225, 827, 1307, 1343
MmeI TCCRAC 4 cut(s) 66, 680, 1334, 1364
Mox20I TGGCCA 1 cut(s) 627
MroXI GAANNNNTTC 1 cut(s) 329
MscI TGGCCA 1 cut(s) 627
MseI TTAA 5 cut(s) 834, 948, 1188, 1445, 1578
MslI CAYNNNNRTG 3 cut(s) 855, 1857, 2069
Msp20I TGGCCA 1 cut(s) 627
MspI CCGG 4 cut(s) 189, 220, 269, 287
MspR9I CCNGG 7 cut(s) 146, 190, 269, 287, 305, 341, 1305
MunI CAATTG 1 cut(s) 1971
MvaI CCWGG 4 cut(s) 146, 305, 341, 1305
MvnI CGCG 2 cut(s) 228, 738
NarI GGCGCC 1 cut(s) 132
NciI CCSGG 3 cut(s) 190, 269, 287
NdeII GATC 8 cut(s) 167, 343, 1465, 1558, 1566, 1600, 2185, 2297
NlaIV GGNNCC 9 cut(s) 133, 153, 193, 194, 345, 372, 1432, 1822, 2082
NmeAIII GCCGAG 1 cut(s) 693
NmuCI GTSAC 6 cut(s) 52, 1067, 1299, 1847, 2060, 2073
NspI RCATGY 2 cut(s) 1259, 2141
NspV TTCGAA 1 cut(s) 1273
PagI TCATGA 1 cut(s) 609
PciI ACATGT 1 cut(s) 2137
PcsI WCGNNNNNNNCGW 2 cut(s) 135, 360
PdmI GAANNNNTTC 1 cut(s) 329
PfeI GAWTC 7 cut(s) 1030, 1100, 1263, 1529, 1658, 1967, 2240
PflMI CCANNNNNTGG 2 cut(s) 148, 2173
PleI GAGTC 4 cut(s) 224, 826, 1306, 1342
PluTI GGCGCC 1 cut(s) 135
PpsI GAGTC 4 cut(s) 224, 826, 1306, 1342
PpuMI RGGWCCY 1 cut(s) 192
PscI ACATGT 1 cut(s) 2137
PshBI ATTAAT 1 cut(s) 1578
Psp124BI GAGCTC 1 cut(s) 93
Psp5II RGGWCCY 1 cut(s) 192
Psp6I CCWGG 4 cut(s) 144, 303, 339, 1303
PspFI CCCAGC 2 cut(s) 273, 374
PspGI CCWGG 4 cut(s) 144, 303, 339, 1303
PspN4I GGNNCC 9 cut(s) 133, 153, 193, 194, 345, 372, 1432, 1822, 2082
PspPI GGNCC 8 cut(s) 151, 192, 235, 271, 883, 1307, 1430, 1862
PspPPI RGGWCCY 1 cut(s) 192
PstI CTGCAG 3 cut(s) 511, 531, 1648
PstNI CAGNNNCTG 2 cut(s) 1117, 1652
PsuI RGATCY 4 cut(s) 343, 1465, 1558, 2185
RsaI GTAC 2 cut(s) 1857, 2400
RsaNI GTAC 2 cut(s) 1856, 2399
RseI CAYNNNNRTG 3 cut(s) 855, 1857, 2069
SacI GAGCTC 1 cut(s) 93
SalI GTCGAC 1 cut(s) 512
SaqAI TTAA 5 cut(s) 834, 948, 1188, 1445, 1578
Sau3AI GATC 8 cut(s) 167, 343, 1465, 1558, 1566, 1600, 2185, 2297
Sau96I GGNCC 8 cut(s) 151, 192, 235, 271, 883, 1307, 1430, 1862
SchI GAGTC 4 cut(s) 225, 827, 1307, 1343
ScrFI CCNGG 7 cut(s) 146, 190, 269, 287, 305, 341, 1305
SduI GDGCHC 5 cut(s) 93, 375, 486, 526, 999
SexAI ACCWGGT 2 cut(s) 144, 1303
SfaNI GCATC 8 cut(s) 404, 673, 1123, 1630, 1666, 1799, 1936, 2280
SfcI CTRYAG 3 cut(s) 507, 527, 1644
SfoI GGCGCC 1 cut(s) 133
SfuI TTCGAA 1 cut(s) 1273
SinI GGWCC 6 cut(s) 151, 192, 883, 1307, 1430, 1862
SmiMI CAYNNNNRTG 3 cut(s) 855, 1857, 2069
SmlI CTYRAG 1 cut(s) 719
SmoI CTYRAG 1 cut(s) 719
SspDI GGCGCC 1 cut(s) 131
SspI AATATT 2 cut(s) 1480, 2446
SspMI CTAG 3 cut(s) 213, 1884, 2180
SstI GAGCTC 1 cut(s) 93
StyD4I CCNGG 7 cut(s) 144, 188, 267, 285, 303, 339, 1303
StyI CCWWGG 1 cut(s) 2013
TaaI ACNGT 2 cut(s) 1168, 2408
TaiI ACGT 1 cut(s) 2458
TaqII GACCGA 1 cut(s) 180
TatI WGTACW 1 cut(s) 1855
TauI GCSGC 5 cut(s) 8, 201, 226, 738, 756
TfiI GAWTC 7 cut(s) 1030, 1100, 1263, 1529, 1658, 1967, 2240
Tru1I TTAA 5 cut(s) 834, 948, 1188, 1445, 1578
Tru9I TTAA 5 cut(s) 834, 948, 1188, 1445, 1578
TscAI CASTG 6 cut(s) 635, 676, 1429, 2082, 2256, 2436
TseFI GTSAC 6 cut(s) 52, 1067, 1299, 1847, 2060, 2073
TseI GCWGC 5 cut(s) 506, 1111, 1457, 1643, 2328
Tsp45I GTSAC 6 cut(s) 52, 1067, 1299, 1847, 2060, 2073
TspGWI ACGGA 1 cut(s) 1679
TspRI CASTG 6 cut(s) 635, 676, 1429, 2082, 2256, 2436
Van91I CCANNNNNTGG 2 cut(s) 148, 2173
VpaK11BI GGWCC 6 cut(s) 151, 192, 883, 1307, 1430, 1862
VspI ATTAAT 1 cut(s) 1578
XapI RAATTY 6 cut(s) 350, 532, 674, 1366, 1491, 1705
XbaI TCTAGA 2 cut(s) 212, 2179
XceI RCATGY 2 cut(s) 1259, 2141
XcmI CCANNNNNNNNNTGG 1 cut(s) 142
XmiI GTMKAC 2 cut(s) 513, 958
XmnI GAANNNNTTC 1 cut(s) 329
XspI CTAG 3 cut(s) 213, 1884, 2180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.