Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0006195

Physical Location & Seq

Genomic Coordinates Forward (+)

29056368 .. 29061168

Gene Structure 4801 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG181600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2514 bp

ATGGCCACCATGGCGCTTCCTGAGGCGAGCACAAGGCTTCCCTTAGGCTCTTTAACCCATATAGACATAAGCACCCTCTCTCAGTCGGAGCTCCACGCCCTCTCTCTCTTGTCCTTGCACCGCTGCGGCACTGACGACCTGGTGGTCCCCAAAATCGACCGATCCCAATTCAATGAGAGCGCCGGGTCCCGCCGCCAGACCTACTCCCGCCTCCGGCGCCCCCAGTCGGATGCGTCGACGGGCCATCGGCGGCGCGTGGCAGGCCTCCTCTCTACTCCGAAAGTGTCACCACCCCCGGCCCAAGCTGACGACCCGGAACGCAACGAGAACCATGCCATCATCGCCCACCTCAAGCACTTGATTTCCCAGGATCCCAAATTCGATCAAATCGACTTGGAGCCCACCTCGACGACGACGATGGCGTCCTTGTTTTTGGACAAGAAGGTTGGAATTGCAGAATTAGGTGTGAGGAAGAGGAAACGAGGGAGGAAGCCCAAAGTGAAAGGGTCAGCAGGGTCCAGTGGCGAGGTACTGGGCATGCAGATTGTAAACAAGAACGGCGCTGCAGTTGACATCTGGGCTTTGCAGAACTCAGAAAACCCTTTTGGGGATGAGCTGAGGAGGAGGACGTTGGGTCTGGAGACTGAGGAGGAGTTGTTGGGTTTCATGAGGGAATTGGGTGGCCAGTGGGGGAGCAGGAGGAAGAAGAGGAAGATTGTCGACGCCACTGAATTCGGGGATGCCTTGCCTCTCGGTTGGAAGCTCTTGCTCGGCCTCAAGCGCAAGGAACGACGTGCTTGGATTTACTGCCGCCGATACATTAGCCCTACTGGACAACAATTTCTGTCCTGCAAGGAAGTTGCTTCTTTTTTGGAGTCCTTCTTTGGTCTTAATAATGCTGAAAGGCAAGATGGTGATGGTGGTGAGAACATTCAGGAGGACTGTGTAATGGCTACCGAAAATCATGCTGATAAAGATGGAGAAAGAAGGCAAGATGTGAGCTCCAGCTCTGCTATACTGGTGTCTTCTATATCTAATGAGCCTGAGAATAAAGTTAGCGTATCGGAAATGGAAAATCTTGCTGAGGTTCAGATACATGACCTTTTTGAATGTCACAAATGCAGTATGACTTTTGCCGAGAAGGATTCATATTTGCAGCATCTATTGTCCTTTCACCAGAGGACTACAAGGAGGTATAGACTTGGTTCGACAGTTGGGGACGGTGTGATAATTAAGGATGGGAAATATGAGTGCCAGTTCTGCCATAAGGTATTTCTGGAAAGGCGTCGCTATAATGGGCATGTAGGAATCCATGTTCGAAATTATGTGAGGAGGGTGGAAGAGTCGCCAGCTCCAACAACTCTTCAAAAGAAAATAGAGTCTCCAACAAGGGAAGGTTTGCTATCAAGGAACTCTAAAATGGATGCTTTGATTGAAATTGCTCAAAACTCTATCCTCGAAACCTCCACTGCTGGACCAAATGAGGAATTAAAAGGTGGTACTACACCAGATCCATACATCAATATTAGTTCAGAAACTCCCGCTTCCAATAAACTCCCTTCCAATTCTCATCTAGAAATGAACATAGAATCTAAACTGACTGAACAGGACCTGGAAGATCTTATGATTGATGCAATTAATGAAGATGAGCAAGAGAGTGAGCATACAATAACTGATGGAAGTATGGAGGAAGCTGTTGATGCTATGGAAGTTGTAGATGATAAGGTGAATTCTTGTTTGGTTACCACTGCCTCATCTGCTGAAGAGAAAAATGGGAAGACATCTGAAAGGTCGGTGGAGATAAATGGTCTGGCACCCACCTCTGATGAATTGGAGATGTCTGGCACCAAGCAGGAGAATGCTTCTGAATGTCCCCATGTACATGCTTCTTCAAATAATAAATCTATTAGTGATGTTGCGGACAATGTAAAATGTGCACCTGCATTAGAGCATCCCAGTCCCGTTGAAGTCGATAAACAAAAGCATACCGAACCAATTGGTAGCATCGATCAACCTCAACCAGCTAATGATAGTTCCTTAGAGTTCCATGCTTCTAACAGAAATGAACTCCAAAGTGGGGTTTGTGACACCTCAATGTCATTGGTGCGACCATTGCTCTGTCTTCCCACATCCAATGCAATTTTGCAGAAGGGAGACGAACATCTTATTGGTGTTGGCCAGAGCGGTGACCATGTAATGGATCTAGAGGATCTGCAACAACATGAAATAGAACATCTGAAGCATGGTTCAGCTGCTGGGCAAGAATCTTTTATACTAGAGGAGGTACCGATTGATATGACAAATAGTTCAGAGATGCAAAAATCAGTTGGTTCCTCTGTCCAGTTTGAACCAGAAGAAGTGATGCTAAACATGGCTGGCAGCAATCAGCTTACAACTGCTTGTATCTGGTGTGGAGTAGATTTCAAACACGAGGCTGTTGATTATGATGTACAACCCGATTCTGTTGGCTTTATGTGTCCAGTGTGCAAGGCAAAAATTTCTGAACGTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBD

Protein Analysis

837

Amino Acids

92.56

Weight (kDa)

5.24

Isoelectric Point (pI)

61.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006195)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22310 AT1G22310
fragaria_vesca	FvH4_2g11920 FvH4_2g11920
malus_domestica	MD05G1043400.v1.1 MD10G1050700.v1.1
prunus_persica	Prupe.8G062800_v2.0.a1 Prupe.8G062800_v2.0.a1
pyrus_communis	pycom05g03580 pycom05g03610 pycom10g03570
rosa_chinensis	RchiOBHm_Chr6g0271611 RchiOBHm_Chr6g0271621 RchiOBHm_Chr6g0271751 RchiOBHm_Chr6g0271781
rosa_laevigata	RLG00000013717 RLG00000013732
rosa_multiflora	Rmu_co8510743.1_g000001 Rmu_sc0002396.1_g000008
rosa_roxburghii	Rroxscaffold_173G00435060 Rroxscaffold_7G00196650
rosa_rugosa	Rorug06G0062300
rosa_samantha	Rh6AG181100 Rh6BG186200 Rh6CG180700 Rh6CG181600
rosa_wichuraiana	Rw6G015530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1948
AasI	GACNNNNNNGTC	2 cut(s)	143, 421
Acc36I	ACCTGC	1 cut(s)	1948
Acc65I	GGTACC	1 cut(s)	2284
AccB1I	GGYRCC	4 cut(s)	216, 1813, 1844, 2284
AccB7I	CCANNNNNTGG	1 cut(s)	2197
AccBSI	CCGCTC	1 cut(s)	2184
AccI	GTMKAC	2 cut(s)	236, 720
AccII	CGCG	1 cut(s)	255
AclWI	GGATC	6 cut(s)	156, 365, 378, 1505, 2208, 2217
AcoI	YGGCCR	3 cut(s)	3, 682, 2176
AcsI	RAATTY	4 cut(s)	377, 731, 1729, 2496
AcuI	CTGAAG	2 cut(s)	1782, 2258
AcyI	GRCGYC	4 cut(s)	217, 422, 723, 1285
AfaI	GTAC	5 cut(s)	531, 1501, 1881, 2286, 2451
AfiI	CCNNNNNNNGG	5 cut(s)	213, 226, 607, 2077, 2197
AgsI	TTSAA	8 cut(s)	172, 1109, 1367, 1436, 1893, 1967, 2348, 2425
AhdI	GACNNNNNGTC	1 cut(s)	633
AjiI	CACGTC	1 cut(s)	794
AjnI	CCWGG	3 cut(s)	138, 366, 1611
AjuI	GAANNNNNNNTTGG	6 cut(s)	588, 620, 1721, 1753, 2151, 2183
AloI	GAACNNNNNNTCC	2 cut(s)	1299, 1331
Alw21I	GWGCWC	4 cut(s)	32, 93, 1004, 1939
Alw26I	GTCTC	3 cut(s)	635, 1386, 2148
Alw44I	GTGCAC	1 cut(s)	1935
AlwI	GGATC	6 cut(s)	156, 365, 378, 1505, 2208, 2217
AlwNI	CAGNNNCTG	2 cut(s)	1612, 2255
AoxI	GGCC	7 cut(s)	3, 241, 262, 297, 682, 772, 2176
ApaLI	GTGCAC	1 cut(s)	1935
ApeKI	GCWGC	5 cut(s)	123, 563, 1156, 2252, 2379
ApoI	RAATTY	4 cut(s)	377, 731, 1729, 2496
AseI	ATTAAT	1 cut(s)	1638
Asp718I	GGTACC	1 cut(s)	2284
AspLEI	GCGC	6 cut(s)	16, 182, 219, 255, 563, 783
AspS9I	GGNCC	7 cut(s)	145, 186, 241, 298, 516, 1475, 1609
AsuC2I	CCSGG	3 cut(s)	184, 296, 314
AsuHPI	GGTGA	6 cut(s)	279, 926, 935, 1166, 1738, 2198
AsuII	TTCGAA	1 cut(s)	1318
AvaII	GGWCC	5 cut(s)	145, 186, 516, 1475, 1609
AxyI	CCTNAGG	2 cut(s)	21, 43
BaeGI	GKGCMC	1 cut(s)	1939
BalI	TGGCCA	3 cut(s)	5, 684, 2178
BamHI	GGATCC	1 cut(s)	370
BanI	GGYRCC	4 cut(s)	216, 1813, 1844, 2284
BanII	GRGCYC	3 cut(s)	93, 402, 1004
BauI	CACGAG	1 cut(s)	2429
BbsI	GAAGAC	3 cut(s)	1017, 1784, 2114
Bbv12I	GWGCWC	4 cut(s)	32, 93, 1004, 1939
BbvCI	CCTCAGC	2 cut(s)	617, 1083
BbvI	GCAGC	5 cut(s)	110, 550, 1168, 2239, 2391
BccI	CCATC	8 cut(s)	252, 344, 412, 905, 911, 971, 1232, 1670
BceAI	ACGGC	1 cut(s)	574
BcgI	CGANNNNNNTGC	4 cut(s)	314, 348, 947, 981
BciT130I	CCWGG	3 cut(s)	140, 368, 1613
BcnI	CCSGG	3 cut(s)	184, 296, 314
BcoDI	GTCTC	3 cut(s)	635, 1386, 2148
BfaI	CTAG	3 cut(s)	1574, 2204, 2276
BfmI	CTRYAG	1 cut(s)	564
BfoI	RGCGCY	4 cut(s)	17, 183, 220, 564
BfuAI	ACCTGC	1 cut(s)	1948
BglI	GCCNNNNNGGC	1 cut(s)	11
BglII	AGATCT	1 cut(s)	1618
BisI	GCNGC	9 cut(s)	124, 127, 193, 251, 564, 811, 1157, 2253, 2380
BlsI	GCNGC	9 cut(s)	125, 128, 194, 252, 565, 812, 1158, 2254, 2381
Bme1390I	CCNGG	6 cut(s)	140, 184, 296, 314, 368, 1613
Bme18I	GGWCC	5 cut(s)	145, 186, 516, 1475, 1609
BmeRI	GACNNNNNGTC	1 cut(s)	633
BmgBI	CACGTC	1 cut(s)	794
BmgT120I	GGNCC	7 cut(s)	145, 186, 241, 298, 516, 1475, 1609
BmrFI	CCNGG	6 cut(s)	140, 184, 296, 314, 368, 1613
BmrI	ACTGGG	3 cut(s)	217, 542, 1950
BmuI	ACTGGG	3 cut(s)	217, 542, 1950
BpiI	GAAGAC	3 cut(s)	1017, 1784, 2114
BplI	GAGNNNNNCTC	2 cut(s)	389, 421
BpmI	CTGGAG	2 cut(s)	659, 988
Bpu10I	CCTNAGC	2 cut(s)	617, 1083
Bpu14I	TTCGAA	1 cut(s)	1318
BpuEI	CTTGAG	2 cut(s)	335, 761
BpuMI	CCSGG	3 cut(s)	184, 296, 314
Bsa29I	ATCGAT	1 cut(s)	2007
BsaHI	GRCGYC	4 cut(s)	217, 422, 723, 1285
BsaJI	CCNNGG	3 cut(s)	9, 294, 366
BsaXI	ACNNNNNCTCC	2 cut(s)	641, 671
Bsc4I	CCNNNNNNNGG	5 cut(s)	213, 226, 607, 2077, 2197
Bse21I	CCTNAGG	2 cut(s)	21, 43
Bse3DI	GCAATG	1 cut(s)	2111
BseBI	CCWGG	3 cut(s)	140, 368, 1613
BseCI	ATCGAT	1 cut(s)	2007
BseDI	CCNNGG	3 cut(s)	9, 294, 366
BseGI	GGATG	7 cut(s)	235, 616, 745, 1243, 1429, 1951, 2129
BseLI	CCNNNNNNNGG	5 cut(s)	213, 226, 607, 2077, 2197
BseMI	GCAATG	1 cut(s)	2111
BseMII	CTCAG	7 cut(s)	12, 95, 606, 608, 636, 1035, 1074
BseRI	GAGGAG	7 cut(s)	257, 634, 637, 662, 665, 1345, 2294
BseSI	GKGCMC	1 cut(s)	1939
BseXI	GCAGC	5 cut(s)	110, 550, 1168, 2239, 2391
BseYI	CCCAGC	1 cut(s)	2255
Bsh1236I	CGCG	1 cut(s)	255
Bsh1285I	CGRYCG	1 cut(s)	160
BshFI	GGCC	7 cut(s)	5, 243, 264, 299, 684, 774, 2178
BshNI	GGYRCC	4 cut(s)	216, 1813, 1844, 2284
BshVI	ATCGAT	1 cut(s)	2007
BsiEI	CGRYCG	1 cut(s)	160
BsiHKAI	GWGCWC	4 cut(s)	32, 93, 1004, 1939
BsiSI	CCGG	4 cut(s)	183, 214, 296, 314
BslFI	GGGAC	5 cut(s)	131, 172, 1232, 1857, 1944
BslI	CCNNNNNNNGG	5 cut(s)	213, 226, 607, 2077, 2197
BsmAI	GTCTC	3 cut(s)	635, 1386, 2148
BsmBI	CGTCTC	1 cut(s)	2148
BsmFI	GGGAC	5 cut(s)	131, 172, 1232, 1857, 1944
BsmI	GAATGC	1 cut(s)	1864
BsnI	GGCC	7 cut(s)	5, 243, 264, 299, 684, 774, 2178
Bsp119I	TTCGAA	1 cut(s)	1318
Bsp1286I	GDGCHC	5 cut(s)	32, 93, 402, 1004, 1939
Bsp1407I	TGTACA	2 cut(s)	1879, 2449
Bsp143I	GATC	8 cut(s)	161, 370, 382, 1510, 1618, 2008, 2200, 2209
Bsp19I	CCATGG	1 cut(s)	9
BspANI	GGCC	7 cut(s)	5, 243, 264, 299, 684, 774, 2178
BspCNI	CTCAG	7 cut(s)	13, 94, 605, 609, 637, 1036, 1075
BspDI	ATCGAT	1 cut(s)	2007
BspFNI	CGCG	1 cut(s)	255
BspHI	TCATGA	1 cut(s)	666
BspMAI	CTGCAG	1 cut(s)	568
BspMI	ACCTGC	1 cut(s)	1948
BspPI	GGATC	6 cut(s)	156, 365, 378, 1505, 2208, 2217
BspT104I	TTCGAA	1 cut(s)	1318
BspT107I	GGYRCC	4 cut(s)	216, 1813, 1844, 2284
BsrBI	CCGCTC	1 cut(s)	2184
BsrDI	GCAATG	1 cut(s)	2111
BsrGI	TGTACA	2 cut(s)	1879, 2449
BssECI	CCNNGG	3 cut(s)	9, 294, 366
BssMI	GATC	8 cut(s)	161, 370, 382, 1510, 1618, 2008, 2200, 2209
BssNI	GRCGYC	4 cut(s)	217, 422, 723, 1285
BssSI	CACGAG	1 cut(s)	2429
BssT1I	CCWWGG	1 cut(s)	9
Bst2BI	CACGAG	1 cut(s)	2429
Bst2UI	CCWGG	3 cut(s)	140, 368, 1613
Bst4CI	ACNGT	3 cut(s)	944, 1213, 1223
Bst6I	CTCTTC	5 cut(s)	467, 701, 1335, 1368, 1758
BstACI	GRCGYC	4 cut(s)	217, 422, 723, 1285
BstAUI	TGTACA	2 cut(s)	1879, 2449
BstBI	TTCGAA	1 cut(s)	1318
BstC8I	GCNNGC	5 cut(s)	28, 262, 539, 1350, 2377
BstDEI	CTNAG	9 cut(s)	21, 43, 81, 592, 617, 645, 1044, 1083, 2038
BstDSI	CCRYGG	1 cut(s)	9
BstEII	GGTNACC	2 cut(s)	1741, 2186
BstF5I	GGATG	7 cut(s)	235, 616, 745, 1243, 1429, 1951, 2129
BstFNI	CGCG	1 cut(s)	255
BstH2I	RGCGCY	4 cut(s)	17, 183, 220, 564
BstHHI	GCGC	6 cut(s)	16, 182, 219, 255, 563, 783
BstKTI	GATC	8 cut(s)	164, 373, 385, 1513, 1621, 2011, 2203, 2212
BstMAI	GTCTC	3 cut(s)	635, 1386, 2148
BstMBI	GATC	8 cut(s)	161, 370, 382, 1510, 1618, 2008, 2200, 2209
BstMCI	CGRYCG	1 cut(s)	160
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 216, 261, 341, 780, 1260, 1700, 1757, 2113
BstNI	CCWGG	3 cut(s)	140, 368, 1613
BstNSI	RCATGY	3 cut(s)	541, 1304, 1886
BstPI	GGTNACC	2 cut(s)	1741, 2186
BstSCI	CCNGG	6 cut(s)	138, 182, 294, 312, 366, 1611
BstSFI	CTRYAG	1 cut(s)	564
BstSLI	GKGCMC	1 cut(s)	1939
BstUI	CGCG	1 cut(s)	255
BstV1I	GCAGC	5 cut(s)	110, 550, 1168, 2239, 2391
BstV2I	GAAGAC	3 cut(s)	1017, 1784, 2114
BstX2I	RGATCY	5 cut(s)	370, 1510, 1618, 2200, 2209
BstYI	RGATCY	5 cut(s)	370, 1510, 1618, 2200, 2209
Bsu15I	ATCGAT	1 cut(s)	2007
Bsu36I	CCTNAGG	2 cut(s)	21, 43
BsuRI	GGCC	7 cut(s)	5, 243, 264, 299, 684, 774, 2178
BsuTUI	ATCGAT	1 cut(s)	2007
BtgI	CCRYGG	1 cut(s)	9
BtgZI	GCGATG	1 cut(s)	325
BtrI	CACGTC	1 cut(s)	794
BtsCI	GGATG	7 cut(s)	235, 616, 745, 1243, 1429, 1951, 2129
BtsI	GCAGTG	2 cut(s)	1467, 1746
BtsIMutI	CAGTG	7 cut(s)	129, 526, 692, 726, 1467, 1746, 2487
BveI	ACCTGC	1 cut(s)	1948
Cac8I	GCNNGC	5 cut(s)	28, 262, 539, 1350, 2377
CaiI	CAGNNNCTG	2 cut(s)	1612, 2255
CciI	TCATGA	1 cut(s)	666
CfoI	GCGC	6 cut(s)	16, 182, 219, 255, 563, 783
Cfr13I	GGNCC	7 cut(s)	145, 186, 241, 298, 516, 1475, 1609
ClaI	ATCGAT	1 cut(s)	2007
CseI	GACGC	4 cut(s)	222, 411, 731, 1274
CsiI	ACCWGGT	1 cut(s)	138
Csp6I	GTAC	5 cut(s)	530, 1500, 1880, 2285, 2450
CviQI	GTAC	5 cut(s)	530, 1500, 1880, 2285, 2450
DdeI	CTNAG	9 cut(s)	21, 43, 81, 592, 617, 645, 1044, 1083, 2038
DinI	GGCGCC	1 cut(s)	218
DpnI	GATC	8 cut(s)	163, 372, 384, 1512, 1620, 2010, 2202, 2211
DpnII	GATC	8 cut(s)	161, 370, 382, 1510, 1618, 2008, 2200, 2209
DrdI	GACNNNNNNGTC	2 cut(s)	143, 421
DriI	GACNNNNNGTC	1 cut(s)	633
DseDI	GACNNNNNNGTC	2 cut(s)	143, 421
EaeI	YGGCCR	3 cut(s)	3, 682, 2176
Eam1104I	CTCTTC	5 cut(s)	467, 701, 1335, 1368, 1758
Eam1105I	GACNNNNNGTC	1 cut(s)	633
EarI	CTCTTC	5 cut(s)	467, 701, 1335, 1368, 1758
Ecl136II	GAGCTC	2 cut(s)	91, 1002
Eco130I	CCWWGG	1 cut(s)	9
Eco147I	AGGCCT	1 cut(s)	264
Eco24I	GRGCYC	3 cut(s)	93, 402, 1004
Eco47I	GGWCC	5 cut(s)	145, 186, 516, 1475, 1609
Eco53kI	GAGCTC	2 cut(s)	91, 1002
Eco57I	CTGAAG	2 cut(s)	1782, 2258
Eco81I	CCTNAGG	2 cut(s)	21, 43
Eco91I	GGTNACC	2 cut(s)	1741, 2186
EcoICRI	GAGCTC	2 cut(s)	91, 1002
EcoO109I	RGGNCCY	2 cut(s)	186, 1609
EcoO65I	GGTNACC	2 cut(s)	1741, 2186
EcoRI	GAATTC	2 cut(s)	731, 1729
EcoRII	CCWGG	3 cut(s)	138, 366, 1611
EcoT14I	CCWWGG	1 cut(s)	9
EcoT38I	GRGCYC	3 cut(s)	93, 402, 1004
EgeI	GGCGCC	1 cut(s)	218
EheI	GGCGCC	1 cut(s)	218
ErhI	CCWWGG	1 cut(s)	9
Esp3I	CGTCTC	1 cut(s)	2148
FaqI	GGGAC	5 cut(s)	131, 172, 1232, 1857, 1944
FauI	CCCGC	3 cut(s)	197, 215, 1549
FblI	GTMKAC	2 cut(s)	236, 720
Fnu4HI	GCNGC	9 cut(s)	124, 127, 193, 251, 564, 811, 1157, 2253, 2380
FokI	GGATG	7 cut(s)	242, 623, 752, 1250, 1436, 1938, 2116
FriOI	GRGCYC	3 cut(s)	93, 402, 1004
Fsp4HI	GCNGC	9 cut(s)	124, 127, 193, 251, 564, 811, 1157, 2253, 2380
FspBI	CTAG	3 cut(s)	1574, 2204, 2276
GlaI	GCGC	6 cut(s)	15, 181, 218, 254, 562, 782
GluI	GCNGC	9 cut(s)	124, 127, 193, 251, 564, 811, 1157, 2253, 2380
GsaI	CCCAGC	1 cut(s)	2259
GsuI	CTGGAG	2 cut(s)	659, 988
HaeII	RGCGCY	4 cut(s)	17, 183, 220, 564
HaeIII	GGCC	7 cut(s)	5, 243, 264, 299, 684, 774, 2178
HapII	CCGG	4 cut(s)	183, 214, 296, 314
HgaI	GACGC	4 cut(s)	222, 411, 731, 1274
HhaI	GCGC	6 cut(s)	16, 182, 219, 255, 563, 783
Hin1I	GRCGYC	4 cut(s)	217, 422, 723, 1285
Hin6I	GCGC	6 cut(s)	14, 180, 217, 253, 561, 781
HinP1I	GCGC	6 cut(s)	14, 180, 217, 253, 561, 781
HincII	GTYRAC	3 cut(s)	237, 571, 721
HindII	GTYRAC	3 cut(s)	237, 571, 721
HinfI	GANTC	8 cut(s)	875, 1145, 1308, 1343, 1379, 1589, 2264, 2459
HpaII	CCGG	4 cut(s)	183, 214, 296, 314
HphI	GGTGA	6 cut(s)	279, 926, 935, 1166, 1738, 2198
Hpy166II	GTNNAC	5 cut(s)	237, 550, 571, 721, 1937
Hpy188III	TCNNGA	7 cut(s)	20, 638, 667, 935, 1277, 1574, 2204
Hpy8I	GTNNAC	5 cut(s)	237, 550, 571, 721, 1937
Hpy99I	CGWCG	8 cut(s)	238, 241, 412, 415, 418, 725, 795, 1290
HpyAV	CCTTC	7 cut(s)	436, 889, 981, 1135, 1388, 1569, 2143
HpyCH4III	ACNGT	3 cut(s)	944, 1213, 1223
HpyCH4IV	ACGT	3 cut(s)	629, 793, 2506
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 216, 261, 341, 780, 1260, 1700, 1757, 2113
HpyF3I	CTNAG	9 cut(s)	21, 43, 81, 592, 617, 645, 1044, 1083, 2038
HpySE526I	ACGT	3 cut(s)	629, 793, 2506
Hsp92I	GRCGYC	4 cut(s)	217, 422, 723, 1285
HspAI	GCGC	6 cut(s)	14, 180, 217, 253, 561, 781
KasI	GGCGCC	1 cut(s)	216
KflI	GGGWCCC	1 cut(s)	186
KpnI	GGTACC	1 cut(s)	2288
Kzo9I	GATC	8 cut(s)	161, 370, 382, 1510, 1618, 2008, 2200, 2209
LmnI	GCTCC	6 cut(s)	88, 96, 397, 693, 1007, 1357
Lsp1109I	GCAGC	5 cut(s)	110, 550, 1168, 2239, 2391
MabI	ACCWGGT	1 cut(s)	138
MaeI	CTAG	3 cut(s)	1574, 2204, 2276
MaeII	ACGT	3 cut(s)	629, 793, 2506
MaeIII	GTNAC	5 cut(s)	285, 1112, 1741, 2084, 2186
MalI	GATC	8 cut(s)	163, 372, 384, 1512, 1620, 2010, 2202, 2211
MbiI	CCGCTC	1 cut(s)	2184
MboI	GATC	8 cut(s)	161, 370, 382, 1510, 1618, 2008, 2200, 2209
MfeI	CAATTG	1 cut(s)	1995
MflI	RGATCY	5 cut(s)	370, 1510, 1618, 2200, 2209
MhlI	GDGCHC	5 cut(s)	32, 93, 402, 1004, 1939
MlsI	TGGCCA	3 cut(s)	5, 684, 2178
MluNI	TGGCCA	3 cut(s)	5, 684, 2178
Mly113I	GGCGCC	1 cut(s)	217
MlyI	GAGTC	3 cut(s)	884, 1352, 1388
MmeI	TCCRAC	6 cut(s)	66, 207, 427, 737, 1379, 1409
Mox20I	TGGCCA	3 cut(s)	5, 684, 2178
MscI	TGGCCA	3 cut(s)	5, 684, 2178
MseI	TTAA	5 cut(s)	53, 891, 1233, 1490, 1638
MslI	CAYNNNNRTG	2 cut(s)	1881, 2093
Msp20I	TGGCCA	3 cut(s)	5, 684, 2178
MspA1I	CMGCKG	2 cut(s)	123, 2252
MspI	CCGG	4 cut(s)	183, 214, 296, 314
MspR9I	CCNGG	6 cut(s)	140, 184, 296, 314, 368, 1613
MunI	CAATTG	1 cut(s)	1995
Mva1269I	GAATGC	1 cut(s)	1864
MvaI	CCWGG	3 cut(s)	140, 368, 1613
MvnI	CGCG	1 cut(s)	255
MwoI	GCNNNNNNNGC	9 cut(s)	11, 216, 261, 341, 780, 1260, 1700, 1757, 2113
NarI	GGCGCC	1 cut(s)	217
NciI	CCSGG	3 cut(s)	184, 296, 314
NcoI	CCATGG	1 cut(s)	9
NdeII	GATC	8 cut(s)	161, 370, 382, 1510, 1618, 2008, 2200, 2209
NmeAIII	GCCGAG	2 cut(s)	750, 1162
NmuCI	GTSAC	4 cut(s)	285, 1112, 2084, 2186
NspI	RCATGY	3 cut(s)	541, 1304, 1886
NspV	TTCGAA	1 cut(s)	1318
PaeI	GCATGC	1 cut(s)	541
PagI	TCATGA	1 cut(s)	666
PaqCI	CACCTGC	1 cut(s)	1948
PceI	AGGCCT	1 cut(s)	264
PcsI	WCGNNNNNNNCGW	4 cut(s)	233, 387, 413, 419
PctI	GAATGC	1 cut(s)	1864
PfeI	GAWTC	5 cut(s)	1145, 1308, 1589, 2264, 2459
PflMI	CCANNNNNTGG	1 cut(s)	2197
PkrI	GCNGC	9 cut(s)	125, 128, 194, 252, 565, 812, 1158, 2254, 2381
PleI	GAGTC	3 cut(s)	883, 1351, 1387
PluTI	GGCGCC	1 cut(s)	220
PpsI	GAGTC	3 cut(s)	883, 1351, 1387
PpuMI	RGGWCCY	2 cut(s)	186, 1609
PshBI	ATTAAT	1 cut(s)	1638
Psp124BI	GAGCTC	2 cut(s)	93, 1004
Psp5II	RGGWCCY	2 cut(s)	186, 1609
Psp6I	CCWGG	3 cut(s)	138, 366, 1611
PspEI	GGTNACC	2 cut(s)	1741, 2186
PspFI	CCCAGC	1 cut(s)	2255
PspGI	CCWGG	3 cut(s)	138, 366, 1611
PspPI	GGNCC	7 cut(s)	145, 186, 241, 298, 516, 1475, 1609
PspPPI	RGGWCCY	2 cut(s)	186, 1609
PstI	CTGCAG	1 cut(s)	568
PstNI	CAGNNNCTG	2 cut(s)	1612, 2255
PsuI	RGATCY	5 cut(s)	370, 1510, 1618, 2200, 2209
PvuII	CAGCTG	1 cut(s)	2252
RsaI	GTAC	5 cut(s)	531, 1501, 1881, 2286, 2451
RsaNI	GTAC	5 cut(s)	530, 1500, 1880, 2285, 2450
RseI	CAYNNNNRTG	2 cut(s)	1881, 2093
SacI	GAGCTC	2 cut(s)	93, 1004
SalI	GTCGAC	2 cut(s)	235, 719
SaqAI	TTAA	5 cut(s)	53, 891, 1233, 1490, 1638
SatI	GCNGC	9 cut(s)	124, 127, 193, 251, 564, 811, 1157, 2253, 2380
Sau3AI	GATC	8 cut(s)	161, 370, 382, 1510, 1618, 2008, 2200, 2209
Sau96I	GGNCC	7 cut(s)	145, 186, 241, 298, 516, 1475, 1609
SchI	GAGTC	3 cut(s)	884, 1352, 1388
ScrFI	CCNGG	6 cut(s)	140, 184, 296, 314, 368, 1613
SduI	GDGCHC	5 cut(s)	32, 93, 402, 1004, 1939
SexAI	ACCWGGT	1 cut(s)	138
SfcI	CTRYAG	1 cut(s)	564
SfoI	GGCGCC	1 cut(s)	218
SfuI	TTCGAA	1 cut(s)	1318
SgrDI	CGTCGACG	1 cut(s)	235
SinI	GGWCC	5 cut(s)	145, 186, 516, 1475, 1609
SmiMI	CAYNNNNRTG	2 cut(s)	1881, 2093
SmlI	CTYRAG	2 cut(s)	350, 776
SmoI	CTYRAG	2 cut(s)	350, 776
SphI	GCATGC	1 cut(s)	541
SseBI	AGGCCT	1 cut(s)	264
SspDI	GGCGCC	1 cut(s)	216
SspI	AATATT	1 cut(s)	1525
SspMI	CTAG	3 cut(s)	1574, 2204, 2276
SstI	GAGCTC	2 cut(s)	93, 1004
StuI	AGGCCT	1 cut(s)	264
StyD4I	CCNGG	6 cut(s)	138, 182, 294, 312, 366, 1611
StyI	CCWWGG	1 cut(s)	9
TaaI	ACNGT	3 cut(s)	944, 1213, 1223
TaiI	ACGT	3 cut(s)	632, 796, 2509
TaqII	GACCGA	1 cut(s)	174
TatI	WGTACW	2 cut(s)	1879, 2449
TauI	GCSGC	4 cut(s)	129, 195, 253, 813
TfiI	GAWTC	5 cut(s)	1145, 1308, 1589, 2264, 2459
Tru1I	TTAA	5 cut(s)	53, 891, 1233, 1490, 1638
Tru9I	TTAA	5 cut(s)	53, 891, 1233, 1490, 1638
TscAI	CASTG	7 cut(s)	136, 526, 692, 733, 1474, 1753, 2487
TseFI	GTSAC	4 cut(s)	285, 1112, 2084, 2186
TseI	GCWGC	5 cut(s)	123, 563, 1156, 2252, 2379
Tsp45I	GTSAC	4 cut(s)	285, 1112, 2084, 2186
TspDTI	ATGAA	7 cut(s)	655, 1137, 1595, 1656, 1842, 2079, 2238
TspRI	CASTG	7 cut(s)	136, 526, 692, 733, 1474, 1753, 2487
Van91I	CCANNNNNTGG	1 cut(s)	2197
VneI	GTGCAC	1 cut(s)	1935
VpaK11BI	GGWCC	5 cut(s)	145, 186, 516, 1475, 1609
VspI	ATTAAT	1 cut(s)	1638
XapI	RAATTY	4 cut(s)	377, 731, 1729, 2496
XbaI	TCTAGA	2 cut(s)	1573, 2203
XceI	RCATGY	3 cut(s)	541, 1304, 1886
XmiI	GTMKAC	2 cut(s)	236, 720
XspI	CTAG	3 cut(s)	1574, 2204, 2276

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.