Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0006195

Physical Location & Seq

Genomic Coordinates Forward (+)

7373183 .. 7383016

Gene Structure 9834 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1043400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2607 bp

ATGGCGACAACAGCCACCGTCCCGCGGCCACAATCGCCACAAGAAGCAAACATTCCCTTAGACTCCTTAACCCACATAGACATCAGCACACTCTCTCAATCGGAGCTCCAAGCGCTCTCCCTCTTCTCCTCTTCCTCCTCCTCGGCCTTAAACCTCTGCCGCACCCAAGACCTCATCGTCCCCAAAATTGACCGATCTGTCTTCAACGAGAGCGCTGGTTCCCGCCGCCAAACGTACTCTCGTCCCCGCCGTCAACAGTCTGATACCTCCACTGCCGCCGCCGCCACTGGCCACCGTCGTCGCGTTGCCGGCCTGCTTGCCACCCCTCCTAAGCTCACTCCAGTGCCACCGGATGACCCCGAACGCAACGAGAACCATGCGATCATCGCTCACCTCAAGAACCTCATTTCCCAGGACCCCAAATTCGGCCAAATCGACTTCGAGCCCGCCCAGACGGCGTTGTTTTCCAGGGTGCTCAGCCCTAATCCCAACATGGGGAGTGGAATCGTAGGTTTGGAGGGGAGAGGTGAAATGGGGGTGAAGAAAAGGAAGCGAGGGAGGAAGCCCAAAGTGAAAGTCTTGGGTTTGGAGAATGAGGGATATGCGGGTATGGGGATGGTGAATAAGGAGGGCGCCGCGGTGGACATTTCGGGTTTGGAGAATGCAGAAGAGCCTTTTGGGGAGGAATTGAGGCGGAGGACGGTGGGTTTGGAAACGGAGGAGCAGTTGTTGGGGTTTATGAGGGACTTGGGTGGGCAGTGGGGGAGTAGGAGGAAGAAGAGGAAGATTGTTGATGCCAGTGAGTTCGGGGATGCCTTGCCGGTCGGTTGGAAGCTCTTGCTGGGCCTTAAGAGGAAGGAAGGACGTGCTTGGATTTACTGCCGCCGATACATAAGCCCTACTGGAGAACAATTTCTGACCTGCAAGGAAGTTTCTTCATTTCTGCACTCCTTCTCTGATCACAATAATGCACGACAGCCAGATGGTGGTCATGGGCGTGAGAATGTTCTGGAAGGGTGCATAGTGGCTACTGAAAATCAGCATGCTGATAAGGATGGAGACCGTAGGCAAGACGTGAATTCCAGCGCTGCTCTAGTTGTGTCTTCTATATCTAATGGGCGTGAAAAGGAAGTTACCTTATTGGGAGTAGACAATCTTGCTGAGGTTCAGATACATGACCTTTTTGAATGTCACAAATGCAATATGACTTTTAATGAGAAGGATTCATATTTGCAGCATCTATTGTCTTTTCACCAGAGGACTACAAGGAGGTATAGACTTGGTTCTACTGTTGGTGATGGTGTGATAATTAAAGATGGGAAATATGAATGCCAGTTTTGCCATAAGGTATTTTTGGAAAGGCGTCGCTACAATGGTCATGTAGGGATTCATGTTCGAAATTATGTCAGGAGGGTGGAAGAATCGCCTGGTCCATCAACACTTCAAAAGAGAATAGAGTCTCCAAACAGCGAAGGTTTGCCATCAAGGATCTCAAAAATGGATGCTCTGATTGAAATTGCTCAAAACTCTATCATAGAAACCTCAACTGCTGAACCTAATGATCAATCCAAAGGTGATGCTGCACCTGATAAACCATACATGGGATTTAGTTCAGAAATTCCTGCTTCCGATTCTCATCAAGAAATGAACATAGATTCACCTCTTAGTGAACAGGACCTGGAGGGTCGCTTGTTTGACATAATTGATTCAGATCAACATGATAGTGAACATACAATAACTGATGGAAGTGTGGAAGGAACTGATGATCCTATGGAAGTTGTAGATATTAAGGACTCTTTTATGAAAACAGCTGAGTTATCAGCTACGGAGATGAACGGTAAACCATCTGAATGTCCTTGGAAAAAAGATGGCTTGGCATCCACCTCTGACGAATTAGAGAAGTCTGGTACTAATCAGGATGGAGCTACTCACTGCAAGATAGATGCTTCTTCGGATGACAAATATATTTGTGATGCAGTAGGGAATGCAATTTTGAATTGCACAAGTGCATCAGAGCAGCCCAATGCCATTGAACACAGCACTAACAATAGTGAACAAGCAATTTACTTTGGTAGCAGCATTGATCACGAACCATCTAAATCTAATGATACTTTGATAGAATCTGTATGCCAAGTTTATGAAGGAAATGAACTGCAAATCGGGATTTCTGACTCCTCAGTACCACTGGTGCAATCATTGGTCTGCTTTCCCAAATCTACTGCAATATTGGATAAGGGAGACGAGCATCTTAGTAGTGCTTCCCAGAGACATGATGAAACAGGGTTTGAGGAGCTGAGGTTGGAGGAAATAGAACCTCTGAAGTATGGATTTCCTAGTGGGCACGAATCTCTTACACTGCACGAGGTACCCATGGATTTGACAAACAACGCGGGGATGGAAAAGGCATTTGGTTCCGCTGTCCAGTTTGAATCAGAAGAAGCCATCTTAAGCATGGCTGGCAGACATCAGATAACAACAGCGTGTGTATGGTGCGGAGTAGAGTTCAACCATGAGGCTGTTGATTCCGAAATACAACCAGATTCCGTTGGTTTTATGTGTCCAACTTGCAAAACAAAAATCTCTGGGCAGCTCAATGTGGTTGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBD

Protein Analysis

869

Amino Acids

95.43

Weight (kDa)

5.2

Isoelectric Point (pI)

56.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006195)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22310 AT1G22310
fragaria_vesca	FvH4_2g11920 FvH4_2g11920
malus_domestica	MD05G1043400.v1.1 MD10G1050700.v1.1
prunus_persica	Prupe.8G062800_v2.0.a1 Prupe.8G062800_v2.0.a1
pyrus_communis	pycom05g03580 pycom05g03610 pycom10g03570
rosa_chinensis	RchiOBHm_Chr6g0271611 RchiOBHm_Chr6g0271621 RchiOBHm_Chr6g0271751 RchiOBHm_Chr6g0271781
rosa_laevigata	RLG00000013717 RLG00000013732
rosa_multiflora	Rmu_co8510743.1_g000001 Rmu_sc0002396.1_g000008
rosa_roxburghii	Rroxscaffold_173G00435060 Rroxscaffold_7G00196650
rosa_rugosa	Rorug06G0062300
rosa_samantha	Rh6AG181100 Rh6BG186200 Rh6CG180700 Rh6CG181600
rosa_wichuraiana	Rw6G015530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	176, 197
Acc36I	ACCTGC	1 cut(s)	929
Acc65I	GGTACC	1 cut(s)	2365
AccB1I	GGYRCC	2 cut(s)	632, 2365
AccB7I	CCANNNNNTGG	1 cut(s)	986
AccI	GTMKAC	1 cut(s)	1149
AccII	CGCG	4 cut(s)	25, 303, 638, 2390
AclWI	GGATC	2 cut(s)	1496, 1760
AcoI	YGGCCR	3 cut(s)	26, 289, 427
AcsI	RAATTY	3 cut(s)	422, 1078, 1617
AcuI	CTGAAG	1 cut(s)	2339
AcyI	GRCGYC	2 cut(s)	633, 1363
AfaI	GTAC	4 cut(s)	236, 1909, 2181, 2367
AfeI	AGCGCT	3 cut(s)	114, 214, 1087
AfiI	CCNNNNNNNGG	6 cut(s)	24, 425, 494, 495, 986, 1601
AflII	CTTAAG	2 cut(s)	848, 2446
AgsI	TTSAA	8 cut(s)	205, 1187, 1445, 1514, 1996, 2033, 2429, 2506
AjiI	CACGTC	2 cut(s)	866, 1075
AjnI	CCWGG	4 cut(s)	411, 467, 1426, 1677
AjuI	GAANNNNNNNTTGG	4 cut(s)	660, 692, 2391, 2423
AleI	CACNNNNGTG	1 cut(s)	341
AloI	GAACNNNNNNTCC	4 cut(s)	392, 424, 1750, 1782
AluBI	AGCT	8 cut(s)	106, 334, 835, 1811, 1823, 1925, 2293, 2590
AluI	AGCT	8 cut(s)	106, 334, 835, 1811, 1823, 1925, 2293, 2590
Alw21I	GWGCWC	2 cut(s)	108, 477
Alw26I	GTCTC	4 cut(s)	1053, 1464, 2232, 2260
AlwI	GGATC	2 cut(s)	1496, 1760
AlwNI	CAGNNNCTG	1 cut(s)	1678
Aor51HI	AGCGCT	3 cut(s)	114, 214, 1087
AoxI	GGCC	6 cut(s)	26, 144, 289, 310, 427, 844
ApeKI	GCWGC	6 cut(s)	1088, 1234, 1580, 2017, 2076, 2587
ApoI	RAATTY	3 cut(s)	422, 1078, 1617
ArsI	GACNNNNNNTTYG	6 cut(s)	407, 439, 561, 593, 691, 723
Asp700I	GAANNNNTTC	1 cut(s)	912
Asp718I	GGTACC	1 cut(s)	2365
AspLEI	GCGC	4 cut(s)	115, 215, 635, 1088
AspS9I	GGNCC	4 cut(s)	415, 844, 1430, 1675
AsuHPI	GGTGA	8 cut(s)	383, 539, 550, 631, 1244, 1307, 1586, 1650
AsuII	TTCGAA	1 cut(s)	1396
AvaII	GGWCC	3 cut(s)	415, 1430, 1675
BaeGI	GKGCMC	1 cut(s)	2343
BalI	TGGCCA	1 cut(s)	291
BanI	GGYRCC	2 cut(s)	632, 2365
BanII	GRGCYC	2 cut(s)	108, 447
BauI	CACGAG	1 cut(s)	2360
BbsI	GAAGAC	2 cut(s)	193, 1095
Bbv12I	GWGCWC	2 cut(s)	108, 477
BbvCI	CCTCAGC	2 cut(s)	1161, 2294
BbvI	GCAGC	6 cut(s)	1075, 1246, 1567, 2029, 2088, 2599
BceAI	ACGGC	2 cut(s)	234, 471
BcgI	CGANNNNNNTGC	2 cut(s)	359, 393
BciT130I	CCWGG	4 cut(s)	413, 469, 1428, 1679
BclI	TGATCA	3 cut(s)	958, 1561, 2083
BcoDI	GTCTC	4 cut(s)	1053, 1464, 2232, 2260
BfaI	CTAG	2 cut(s)	1094, 2334
BfoI	RGCGCY	4 cut(s)	116, 216, 636, 1089
BfrI	CTTAAG	2 cut(s)	848, 2446
BfuAI	ACCTGC	1 cut(s)	929
BglI	GCCNNNNNGGC	1 cut(s)	455
BlpI	GCTNAGC	1 cut(s)	476
Bme1390I	CCNGG	4 cut(s)	413, 469, 1428, 1679
Bme18I	GGWCC	3 cut(s)	415, 1430, 1675
BmgBI	CACGTC	2 cut(s)	866, 1075
BmgT120I	GGNCC	4 cut(s)	415, 844, 1430, 1675
BmiI	GGNNCC	5 cut(s)	220, 417, 634, 2367, 2413
BmrFI	CCNGG	4 cut(s)	413, 469, 1428, 1679
BpiI	GAAGAC	2 cut(s)	193, 1095
BpmI	CTGGAG	3 cut(s)	324, 924, 1700
Bpu10I	CCTNAGC	3 cut(s)	330, 1161, 2294
Bpu1102I	GCTNAGC	1 cut(s)	476
Bpu14I	TTCGAA	1 cut(s)	1396
BpuEI	CTTGAG	1 cut(s)	380
BsaBI	GATNNNNATC	2 cut(s)	1635, 1710
BsaHI	GRCGYC	2 cut(s)	633, 1363
BsaI	GGTCTC	1 cut(s)	1053
BsaJI	CCNNGG	7 cut(s)	23, 141, 411, 468, 636, 1856, 2370
BsaWI	WCCGGW	1 cut(s)	349
BsaXI	ACNNNNNCTCC	6 cut(s)	710, 713, 740, 743, 2282, 2312
Bsc4I	CCNNNNNNNGG	6 cut(s)	24, 425, 494, 495, 986, 1601
Bse118I	RCCGGY	2 cut(s)	308, 820
Bse1I	ACTGG	7 cut(s)	292, 341, 798, 907, 1333, 2190, 2422
Bse8I	GATNNNNATC	2 cut(s)	1635, 1710
BseBI	CCWGG	4 cut(s)	413, 469, 1428, 1679
BseDI	CCNNGG	7 cut(s)	23, 141, 411, 468, 636, 1856, 2370
BseGI	GGATG	9 cut(s)	358, 621, 817, 1060, 1507, 1877, 1924, 1960, 2400
BseJI	GATNNNNATC	2 cut(s)	1635, 1710
BseLI	CCNNNNNNNGG	6 cut(s)	24, 425, 494, 495, 986, 1601
BseMII	CTCAG	5 cut(s)	490, 1152, 1803, 2190, 2285
BseNI	ACTGG	7 cut(s)	292, 341, 798, 907, 1333, 2190, 2422
BseRI	GAGGAG	6 cut(s)	118, 127, 130, 734, 2164, 2303
BseSI	GKGCMC	1 cut(s)	2343
BseXI	GCAGC	6 cut(s)	1075, 1246, 1567, 2029, 2088, 2599
BseYI	CCCAGC	1 cut(s)	841
BsgI	GTGCAG	3 cut(s)	929, 1566, 2342
Bsh1236I	CGCG	4 cut(s)	25, 303, 638, 2390
Bsh1285I	CGRYCG	1 cut(s)	825
BshFI	GGCC	6 cut(s)	28, 146, 291, 312, 429, 846
BshNI	GGYRCC	2 cut(s)	632, 2365
BsiEI	CGRYCG	1 cut(s)	825
BsiHKAI	GWGCWC	2 cut(s)	108, 477
BsiSI	CCGG	3 cut(s)	309, 350, 821
BslFI	GGGAC	4 cut(s)	5, 164, 228, 758
BslI	CCNNNNNNNGG	6 cut(s)	24, 425, 494, 495, 986, 1601
BsmAI	GTCTC	4 cut(s)	1053, 1464, 2232, 2260
BsmBI	CGTCTC	1 cut(s)	2232
BsmFI	GGGAC	4 cut(s)	5, 164, 228, 758
BsmI	GAATGC	3 cut(s)	667, 1334, 1990
BsnI	GGCC	6 cut(s)	28, 146, 291, 312, 429, 846
Bso31I	GGTCTC	1 cut(s)	1053
Bsp119I	TTCGAA	1 cut(s)	1396
Bsp1286I	GDGCHC	4 cut(s)	108, 447, 477, 2343
Bsp143I	GATC	8 cut(s)	194, 381, 958, 1488, 1561, 1711, 1765, 2083
Bsp1720I	GCTNAGC	1 cut(s)	476
Bsp19I	CCATGG	1 cut(s)	2370
BspANI	GGCC	6 cut(s)	28, 146, 291, 312, 429, 846
BspCNI	CTCAG	5 cut(s)	489, 1153, 1804, 2189, 2286
BspFNI	CGCG	4 cut(s)	25, 303, 638, 2390
BspLI	GGNNCC	5 cut(s)	220, 417, 634, 2367, 2413
BspMI	ACCTGC	1 cut(s)	929
BspPI	GGATC	2 cut(s)	1496, 1760
BspQI	GCTCTTC	1 cut(s)	663
BspT104I	TTCGAA	1 cut(s)	1396
BspT107I	GGYRCC	2 cut(s)	632, 2365
BspTI	CTTAAG	2 cut(s)	848, 2446
BspTNI	GGTCTC	1 cut(s)	1053
BsrFI	RCCGGY	2 cut(s)	308, 820
BsrI	ACTGG	7 cut(s)	292, 341, 798, 907, 1333, 2190, 2422
BssAI	RCCGGY	2 cut(s)	308, 820
BssECI	CCNNGG	7 cut(s)	23, 141, 411, 468, 636, 1856, 2370
BssMI	GATC	8 cut(s)	194, 381, 958, 1488, 1561, 1711, 1765, 2083
BssNI	GRCGYC	2 cut(s)	633, 1363
BssSI	CACGAG	1 cut(s)	2360
BssT1I	CCWWGG	2 cut(s)	1856, 2370
Bst2BI	CACGAG	1 cut(s)	2360
Bst2UI	CCWGG	4 cut(s)	413, 469, 1428, 1679
Bst4CI	ACNGT	7 cut(s)	19, 258, 296, 703, 1064, 1291, 1838
Bst6I	CTCTTC	4 cut(s)	128, 136, 663, 773
BstACI	GRCGYC	2 cut(s)	633, 1363
BstAFI	CTTAAG	2 cut(s)	848, 2446
BstBI	TTCGAA	1 cut(s)	1396
BstC8I	GCNNGC	6 cut(s)	310, 314, 318, 447, 1044, 2458
BstDEI	CTNAG	9 cut(s)	58, 330, 476, 1161, 1664, 1812, 2176, 2249, 2294
BstDSI	CCRYGG	3 cut(s)	23, 636, 2370
BstF5I	GGATG	9 cut(s)	358, 621, 817, 1060, 1507, 1877, 1924, 1960, 2400
BstFNI	CGCG	4 cut(s)	25, 303, 638, 2390
BstH2I	RGCGCY	4 cut(s)	116, 216, 636, 1089
BstHHI	GCGC	4 cut(s)	115, 215, 635, 1088
BstKTI	GATC	8 cut(s)	197, 384, 961, 1491, 1564, 1714, 1768, 2086
BstMAI	GTCTC	4 cut(s)	1053, 1464, 2232, 2260
BstMBI	GATC	8 cut(s)	194, 381, 958, 1488, 1561, 1711, 1765, 2083
BstMCI	CGRYCG	1 cut(s)	825
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 34, 112, 281, 309, 386, 455, 1338, 2457
BstNI	CCWGG	4 cut(s)	413, 469, 1428, 1679
BstNSI	RCATGY	1 cut(s)	1046
BstSCI	CCNGG	4 cut(s)	411, 467, 1426, 1677
BstSLI	GKGCMC	1 cut(s)	2343
BstUI	CGCG	4 cut(s)	25, 303, 638, 2390
BstV1I	GCAGC	6 cut(s)	1075, 1246, 1567, 2029, 2088, 2599
BstV2I	GAAGAC	2 cut(s)	193, 1095
BstX2I	RGATCY	1 cut(s)	1488
BstYI	RGATCY	1 cut(s)	1488
BsuRI	GGCC	6 cut(s)	28, 146, 291, 312, 429, 846
BtgI	CCRYGG	3 cut(s)	23, 636, 2370
BtgZI	GCGATG	1 cut(s)	370
BtrI	CACGTC	2 cut(s)	866, 1075
BtsCI	GGATG	9 cut(s)	358, 621, 817, 1060, 1507, 1877, 1924, 1960, 2400
BtsI	GCAGTG	4 cut(s)	270, 764, 1930, 2354
BtsIMutI	CAGTG	8 cut(s)	270, 285, 348, 764, 805, 1930, 2183, 2354
BveI	ACCTGC	1 cut(s)	929
Cac8I	GCNNGC	6 cut(s)	310, 314, 318, 447, 1044, 2458
CaiI	CAGNNNCTG	1 cut(s)	1678
CfoI	GCGC	4 cut(s)	115, 215, 635, 1088
Cfr10I	RCCGGY	2 cut(s)	308, 820
Cfr13I	GGNCC	4 cut(s)	415, 844, 1430, 1675
Cfr42I	CCGCGG	2 cut(s)	26, 639
CseI	GACGC	1 cut(s)	1352
Csp6I	GTAC	4 cut(s)	235, 1908, 2180, 2366
CviQI	GTAC	4 cut(s)	235, 1908, 2180, 2366
DdeI	CTNAG	9 cut(s)	58, 330, 476, 1161, 1664, 1812, 2176, 2249, 2294
DinI	GGCGCC	1 cut(s)	634
DpnI	GATC	8 cut(s)	196, 383, 960, 1490, 1563, 1713, 1767, 2085
DpnII	GATC	8 cut(s)	194, 381, 958, 1488, 1561, 1711, 1765, 2083
DrdI	GACNNNNNNGTC	2 cut(s)	176, 197
DseDI	GACNNNNNNGTC	2 cut(s)	176, 197
EaeI	YGGCCR	3 cut(s)	26, 289, 427
Eam1104I	CTCTTC	4 cut(s)	128, 136, 663, 773
EarI	CTCTTC	4 cut(s)	128, 136, 663, 773
EciI	GGCGGA	1 cut(s)	709
Ecl136II	GAGCTC	1 cut(s)	106
Eco130I	CCWWGG	2 cut(s)	1856, 2370
Eco24I	GRGCYC	2 cut(s)	108, 447
Eco31I	GGTCTC	1 cut(s)	1053
Eco47I	GGWCC	3 cut(s)	415, 1430, 1675
Eco47III	AGCGCT	3 cut(s)	114, 214, 1087
Eco53kI	GAGCTC	1 cut(s)	106
Eco57I	CTGAAG	1 cut(s)	2339
EcoICRI	GAGCTC	1 cut(s)	106
EcoO109I	RGGNCCY	2 cut(s)	415, 1675
EcoRI	GAATTC	1 cut(s)	1078
EcoRII	CCWGG	4 cut(s)	411, 467, 1426, 1677
EcoT14I	CCWWGG	2 cut(s)	1856, 2370
EcoT38I	GRGCYC	2 cut(s)	108, 447
EgeI	GGCGCC	1 cut(s)	634
EheI	GGCGCC	1 cut(s)	634
ErhI	CCWWGG	2 cut(s)	1856, 2370
Esp3I	CGTCTC	1 cut(s)	2232
FaqI	GGGAC	4 cut(s)	5, 164, 228, 758
FauI	CCCGC	6 cut(s)	30, 230, 254, 454, 598, 2383
FbaI	TGATCA	3 cut(s)	958, 1561, 2083
FblI	GTMKAC	1 cut(s)	1149
FokI	GGATG	9 cut(s)	365, 628, 824, 1067, 1514, 1864, 1931, 1967, 2407
FriOI	GRGCYC	2 cut(s)	108, 447
FspBI	CTAG	2 cut(s)	1094, 2334
GlaI	GCGC	4 cut(s)	114, 214, 634, 1087
GsaI	CCCAGC	1 cut(s)	845
GsuI	CTGGAG	3 cut(s)	324, 924, 1700
HaeII	RGCGCY	4 cut(s)	116, 216, 636, 1089
HaeIII	GGCC	6 cut(s)	28, 146, 291, 312, 429, 846
HapII	CCGG	3 cut(s)	309, 350, 821
HgaI	GACGC	1 cut(s)	1352
HhaI	GCGC	4 cut(s)	115, 215, 635, 1088
Hin1I	GRCGYC	2 cut(s)	633, 1363
Hin6I	GCGC	4 cut(s)	113, 213, 633, 1086
HinP1I	GCGC	4 cut(s)	113, 213, 633, 1086
HincII	GTYRAC	1 cut(s)	254
HindII	GTYRAC	1 cut(s)	254
HpaII	CCGG	3 cut(s)	309, 350, 821
HphI	GGTGA	8 cut(s)	383, 539, 550, 631, 1244, 1307, 1586, 1650
Hpy166II	GTNNAC	7 cut(s)	254, 643, 1150, 1670, 1727, 1841, 2054
Hpy188III	TCNNGA	7 cut(s)	397, 1010, 1408, 1640, 1916, 2087, 2161
Hpy8I	GTNNAC	7 cut(s)	254, 643, 1150, 1670, 1727, 1841, 2054
Hpy99I	CGWCG	3 cut(s)	300, 303, 1368
HpyAV	CCTTC	8 cut(s)	850, 854, 961, 1007, 1213, 1466, 1748, 2135
HpyCH4III	ACNGT	7 cut(s)	19, 258, 296, 703, 1064, 1291, 1838
HpyCH4IV	ACGT	3 cut(s)	233, 865, 1074
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 34, 112, 281, 309, 386, 455, 1338, 2457
HpyF3I	CTNAG	9 cut(s)	58, 330, 476, 1161, 1664, 1812, 2176, 2249, 2294
HpySE526I	ACGT	3 cut(s)	233, 865, 1074
Hsp92I	GRCGYC	2 cut(s)	633, 1363
HspAI	GCGC	4 cut(s)	113, 213, 633, 1086
KasI	GGCGCC	1 cut(s)	632
KpnI	GGTACC	1 cut(s)	2369
KroI	GCCGGC	1 cut(s)	308
KroNI	GCCGGC	1 cut(s)	310
Ksp22I	TGATCA	3 cut(s)	958, 1561, 2083
KspI	CCGCGG	2 cut(s)	26, 639
Kzo9I	GATC	8 cut(s)	194, 381, 958, 1488, 1561, 1711, 1765, 2083
LguI	GCTCTTC	1 cut(s)	663
LmnI	GCTCC	5 cut(s)	103, 111, 721, 1922, 2290
Lsp1109I	GCAGC	6 cut(s)	1075, 1246, 1567, 2029, 2088, 2599
MaeI	CTAG	2 cut(s)	1094, 2334
MaeII	ACGT	3 cut(s)	233, 865, 1074
MaeIII	GTNAC	2 cut(s)	1132, 1190
MalI	GATC	8 cut(s)	196, 383, 960, 1490, 1563, 1713, 1767, 2085
MboI	GATC	8 cut(s)	194, 381, 958, 1488, 1561, 1711, 1765, 2083
MflI	RGATCY	1 cut(s)	1488
MhlI	GDGCHC	4 cut(s)	108, 447, 477, 2343
MlsI	TGGCCA	1 cut(s)	291
MluNI	TGGCCA	1 cut(s)	291
Mly113I	GGCGCC	1 cut(s)	633
MlyI	GAGTC	4 cut(s)	56, 1466, 1787, 2165
MmeI	TCCRAC	3 cut(s)	809, 2280, 2585
Mox20I	TGGCCA	1 cut(s)	291
MroNI	GCCGGC	1 cut(s)	308
MroXI	GAANNNNTTC	1 cut(s)	912
MscI	TGGCCA	1 cut(s)	291
MseI	TTAA	7 cut(s)	68, 149, 849, 1212, 1311, 1788, 2447
MslI	CAYNNNNRTG	5 cut(s)	341, 966, 996, 1722, 1849
Msp20I	TGGCCA	1 cut(s)	291
MspA1I	CMGCKG	4 cut(s)	25, 638, 1811, 2417
MspCI	CTTAAG	2 cut(s)	848, 2446
MspI	CCGG	3 cut(s)	309, 350, 821
MspR9I	CCNGG	4 cut(s)	413, 469, 1428, 1679
Mva1269I	GAATGC	3 cut(s)	667, 1334, 1990
MvaI	CCWGG	4 cut(s)	413, 469, 1428, 1679
MvnI	CGCG	4 cut(s)	25, 303, 638, 2390
MwoI	GCNNNNNNNGC	9 cut(s)	11, 34, 112, 281, 309, 386, 455, 1338, 2457
NaeI	GCCGGC	1 cut(s)	310
NarI	GGCGCC	1 cut(s)	633
NcoI	CCATGG	1 cut(s)	2370
NdeII	GATC	8 cut(s)	194, 381, 958, 1488, 1561, 1711, 1765, 2083
NgoMIV	GCCGGC	1 cut(s)	308
NlaIV	GGNNCC	5 cut(s)	220, 417, 634, 2367, 2413
NmeAIII	GCCGAG	1 cut(s)	122
NmuCI	GTSAC	1 cut(s)	1190
NspI	RCATGY	1 cut(s)	1046
NspV	TTCGAA	1 cut(s)	1396
OliI	CACNNNNGTG	1 cut(s)	341
PaeI	GCATGC	1 cut(s)	1046
PciSI	GCTCTTC	1 cut(s)	663
PcsI	WCGNNNNNNNCGW	2 cut(s)	247, 432
PctI	GAATGC	3 cut(s)	667, 1334, 1990
PdiI	GCCGGC	1 cut(s)	310
PdmI	GAANNNNTTC	1 cut(s)	912
PflMI	CCANNNNNTGG	1 cut(s)	986
PleI	GAGTC	4 cut(s)	56, 1465, 1787, 2165
PluTI	GGCGCC	1 cut(s)	636
PpsI	GAGTC	4 cut(s)	56, 1465, 1787, 2165
PpuMI	RGGWCCY	2 cut(s)	415, 1675
Psp124BI	GAGCTC	1 cut(s)	108
Psp5II	RGGWCCY	2 cut(s)	415, 1675
Psp6I	CCWGG	4 cut(s)	411, 467, 1426, 1677
PspFI	CCCAGC	1 cut(s)	841
PspGI	CCWGG	4 cut(s)	411, 467, 1426, 1677
PspN4I	GGNNCC	5 cut(s)	220, 417, 634, 2367, 2413
PspPI	GGNCC	4 cut(s)	415, 844, 1430, 1675
PspPPI	RGGWCCY	2 cut(s)	415, 1675
PstNI	CAGNNNCTG	1 cut(s)	1678
PsuI	RGATCY	1 cut(s)	1488
PvuII	CAGCTG	1 cut(s)	1811
RsaI	GTAC	4 cut(s)	236, 1909, 2181, 2367
RsaNI	GTAC	4 cut(s)	235, 1908, 2180, 2366
RseI	CAYNNNNRTG	5 cut(s)	341, 966, 996, 1722, 1849
SacI	GAGCTC	1 cut(s)	108
SacII	CCGCGG	2 cut(s)	26, 639
SapI	GCTCTTC	1 cut(s)	663
SaqAI	TTAA	7 cut(s)	68, 149, 849, 1212, 1311, 1788, 2447
Sau3AI	GATC	8 cut(s)	194, 381, 958, 1488, 1561, 1711, 1765, 2083
Sau96I	GGNCC	4 cut(s)	415, 844, 1430, 1675
SchI	GAGTC	4 cut(s)	56, 1466, 1787, 2165
ScrFI	CCNGG	4 cut(s)	413, 469, 1428, 1679
SduI	GDGCHC	4 cut(s)	108, 447, 477, 2343
SfoI	GGCGCC	1 cut(s)	634
Sfr303I	CCGCGG	2 cut(s)	26, 639
SfuI	TTCGAA	1 cut(s)	1396
SgrBI	CCGCGG	2 cut(s)	26, 639
SinI	GGWCC	3 cut(s)	415, 1430, 1675
SmiMI	CAYNNNNRTG	5 cut(s)	341, 966, 996, 1722, 1849
SmlI	CTYRAG	3 cut(s)	395, 848, 2446
SmoI	CTYRAG	3 cut(s)	395, 848, 2446
SphI	GCATGC	1 cut(s)	1046
SspDI	GGCGCC	1 cut(s)	632
SspI	AATATT	1 cut(s)	2226
SspMI	CTAG	2 cut(s)	1094, 2334
SstI	GAGCTC	1 cut(s)	108
StyD4I	CCNGG	4 cut(s)	411, 467, 1426, 1677
StyI	CCWWGG	2 cut(s)	1856, 2370
TaaI	ACNGT	7 cut(s)	19, 258, 296, 703, 1064, 1291, 1838
TaiI	ACGT	3 cut(s)	236, 868, 1077
TaqI	TCGA	3 cut(s)	435, 441, 1396
TaqII	GACCGA	1 cut(s)	207
TauI	GCSGC	8 cut(s)	28, 162, 228, 278, 281, 284, 638, 885
Tru1I	TTAA	7 cut(s)	68, 149, 849, 1212, 1311, 1788, 2447
Tru9I	TTAA	7 cut(s)	68, 149, 849, 1212, 1311, 1788, 2447
TscAI	CASTG	8 cut(s)	277, 292, 348, 764, 805, 1937, 2190, 2361
TseFI	GTSAC	1 cut(s)	1190
TseI	GCWGC	6 cut(s)	1088, 1234, 1580, 2017, 2076, 2587
Tsp45I	GTSAC	1 cut(s)	1190
TspGWI	ACGGA	3 cut(s)	731, 1841, 2533
TspRI	CASTG	8 cut(s)	277, 292, 348, 764, 805, 1937, 2190, 2361
Van91I	CCANNNNNTGG	1 cut(s)	986
Vha464I	CTTAAG	2 cut(s)	848, 2446
VpaK11BI	GGWCC	3 cut(s)	415, 1430, 1675
XapI	RAATTY	3 cut(s)	422, 1078, 1617
XceI	RCATGY	1 cut(s)	1046
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2449
XmiI	GTMKAC	1 cut(s)	1149
XmnI	GAANNNNTTC	1 cut(s)	912
XspI	CTAG	2 cut(s)	1094, 2334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.