zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G22310 AT1G22310 |
| fragaria_vesca | FvH4_2g11920 FvH4_2g11920 |
| malus_domestica | MD05G1043400.v1.1 MD10G1050700.v1.1 |
| prunus_persica | Prupe.8G062800_v2.0.a1 Prupe.8G062800_v2.0.a1 |
| pyrus_communis | pycom05g03580 pycom05g03610 pycom10g03570 |
| rosa_chinensis | RchiOBHm_Chr6g0271611 RchiOBHm_Chr6g0271621 RchiOBHm_Chr6g0271751 RchiOBHm_Chr6g0271781 |
| rosa_laevigata | RLG00000013717 RLG00000013732 |
| rosa_multiflora | Rmu_co8510743.1_g000001 Rmu_sc0002396.1_g000008 |
| rosa_roxburghii | Rroxscaffold_173G00435060 Rroxscaffold_7G00196650 |
| rosa_rugosa | Rorug06G0062300 |
| rosa_samantha | Rh6AG181100 Rh6BG186200 Rh6CG180700 Rh6CG181600 |
| rosa_wichuraiana | Rw6G015530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 88 |
| AccB1I | GGYRCC | 1 cut(s) | 88 |
| AclWI | GGATC | 2 cut(s) | 12, 21 |
| AcoI | YGGCCR | 1 cut(s) | 61 |
| AcsI | RAATTY | 1 cut(s) | 300 |
| AcuI | CTGAAG | 1 cut(s) | 62 |
| AfaI | GTAC | 2 cut(s) | 90, 255 |
| AgsI | TTSAA | 2 cut(s) | 152, 229 |
| AluBI | AGCT | 1 cut(s) | 193 |
| AluI | AGCT | 1 cut(s) | 193 |
| AlwI | GGATC | 2 cut(s) | 12, 21 |
| AoxI | GGCC | 1 cut(s) | 61 |
| ApeKI | GCWGC | 2 cut(s) | 56, 183 |
| ApoI | RAATTY | 1 cut(s) | 300 |
| Asp718I | GGTACC | 1 cut(s) | 88 |
| BalI | TGGCCA | 1 cut(s) | 63 |
| BanI | GGYRCC | 1 cut(s) | 88 |
| BauI | CACGAG | 1 cut(s) | 233 |
| BbvI | GCAGC | 2 cut(s) | 43, 195 |
| BfaI | CTAG | 2 cut(s) | 8, 80 |
| BisI | GCNGC | 2 cut(s) | 57, 184 |
| BlsI | GCNGC | 2 cut(s) | 58, 185 |
| BmiI | GGNNCC | 2 cut(s) | 90, 136 |
| BmsI | GCATC | 2 cut(s) | 108, 156 |
| Bse1I | ACTGG | 2 cut(s) | 145, 284 |
| BseNI | ACTGG | 2 cut(s) | 145, 284 |
| BseRI | GAGGAG | 1 cut(s) | 98 |
| BseXI | GCAGC | 2 cut(s) | 43, 195 |
| BshFI | GGCC | 1 cut(s) | 63 |
| BshNI | GGYRCC | 1 cut(s) | 88 |
| BsnI | GGCC | 1 cut(s) | 63 |
| Bsp1407I | TGTACA | 1 cut(s) | 253 |
| Bsp143I | GATC | 2 cut(s) | 4, 13 |
| BspANI | GGCC | 1 cut(s) | 63 |
| BspLI | GGNNCC | 2 cut(s) | 90, 136 |
| BspPI | GGATC | 2 cut(s) | 12, 21 |
| BspT107I | GGYRCC | 1 cut(s) | 88 |
| BsrGI | TGTACA | 1 cut(s) | 253 |
| BsrI | ACTGG | 2 cut(s) | 145, 284 |
| BssMI | GATC | 2 cut(s) | 4, 13 |
| BssSI | CACGAG | 1 cut(s) | 233 |
| Bst2BI | CACGAG | 1 cut(s) | 233 |
| BstAUI | TGTACA | 1 cut(s) | 253 |
| BstC8I | GCNNGC | 2 cut(s) | 61, 181 |
| BstKTI | GATC | 2 cut(s) | 7, 16 |
| BstMBI | GATC | 2 cut(s) | 4, 13 |
| BstV1I | GCAGC | 2 cut(s) | 43, 195 |
| BstX2I | RGATCY | 2 cut(s) | 4, 13 |
| BstYI | RGATCY | 2 cut(s) | 4, 13 |
| BsuRI | GGCC | 1 cut(s) | 63 |
| BtsIMutI | CAGTG | 1 cut(s) | 291 |
| Cac8I | GCNNGC | 2 cut(s) | 61, 181 |
| Csp6I | GTAC | 2 cut(s) | 89, 254 |
| CviAII | CATG | 3 cut(s) | 26, 47, 175 |
| CviJI | RGCY | 5 cut(s) | 63, 179, 193, 239, 273 |
| CviKI_1 | RGCY | 5 cut(s) | 63, 179, 193, 239, 273 |
| CviQI | GTAC | 2 cut(s) | 89, 254 |
| DpnI | GATC | 2 cut(s) | 6, 15 |
| DpnII | GATC | 2 cut(s) | 4, 13 |
| EaeI | YGGCCR | 1 cut(s) | 61 |
| Eco57I | CTGAAG | 1 cut(s) | 62 |
| FaeI | CATG | 3 cut(s) | 29, 50, 178 |
| FaiI | YATR | 7 cut(s) | 27, 48, 77, 101, 176, 249, 278 |
| FatI | CATG | 3 cut(s) | 25, 46, 174 |
| Fnu4HI | GCNGC | 2 cut(s) | 57, 184 |
| Fsp4HI | GCNGC | 2 cut(s) | 57, 184 |
| FspBI | CTAG | 2 cut(s) | 8, 80 |
| GluI | GCNGC | 2 cut(s) | 57, 184 |
| HaeIII | GGCC | 1 cut(s) | 63 |
| Hin1II | CATG | 3 cut(s) | 29, 50, 178 |
| HinfI | GANTC | 2 cut(s) | 68, 263 |
| Hpy188I | TCNGA | 3 cut(s) | 42, 115, 307 |
| Hpy188III | TCNNGA | 1 cut(s) | 8 |
| HpyCH4V | TGCA | 3 cut(s) | 19, 121, 291 |
| Hsp92II | CATG | 3 cut(s) | 29, 50, 178 |
| KpnI | GGTACC | 1 cut(s) | 92 |
| Kzo9I | GATC | 2 cut(s) | 4, 13 |
| LpnPI | CCDG | 6 cut(s) | 45, 158, 165, 168, 196, 297 |
| Lsp1109I | GCAGC | 2 cut(s) | 43, 195 |
| LweI | GCATC | 2 cut(s) | 108, 156 |
| MaeI | CTAG | 2 cut(s) | 8, 80 |
| MalI | GATC | 2 cut(s) | 6, 15 |
| MboI | GATC | 2 cut(s) | 4, 13 |
| MboII | GAAGA | 1 cut(s) | 170 |
| MflI | RGATCY | 2 cut(s) | 4, 13 |
| MlsI | TGGCCA | 1 cut(s) | 63 |
| MluCI | AATT | 1 cut(s) | 300 |
| MluNI | TGGCCA | 1 cut(s) | 63 |
| MnlI | CCTC | 5 cut(s) | 4, 76, 79, 148, 229 |
| Mox20I | TGGCCA | 1 cut(s) | 63 |
| MscI | TGGCCA | 1 cut(s) | 63 |
| Msp20I | TGGCCA | 1 cut(s) | 63 |
| NdeII | GATC | 2 cut(s) | 4, 13 |
| NlaIII | CATG | 3 cut(s) | 29, 50, 178 |
| NlaIV | GGNNCC | 2 cut(s) | 90, 136 |
| PfeI | GAWTC | 2 cut(s) | 68, 263 |
| PkrI | GCNGC | 2 cut(s) | 58, 185 |
| PspN4I | GGNNCC | 2 cut(s) | 90, 136 |
| PsuI | RGATCY | 2 cut(s) | 4, 13 |
| RsaI | GTAC | 2 cut(s) | 90, 255 |
| RsaNI | GTAC | 2 cut(s) | 89, 254 |
| SatI | GCNGC | 2 cut(s) | 57, 184 |
| Sau3AI | GATC | 2 cut(s) | 4, 13 |
| SetI | ASST | 2 cut(s) | 90, 195 |
| SfaNI | GCATC | 2 cut(s) | 108, 156 |
| Sse9I | AATT | 1 cut(s) | 300 |
| SspMI | CTAG | 2 cut(s) | 8, 80 |
| TasI | AATT | 1 cut(s) | 300 |
| TatI | WGTACW | 1 cut(s) | 253 |
| TfiI | GAWTC | 2 cut(s) | 68, 263 |
| TscAI | CASTG | 1 cut(s) | 291 |
| TseI | GCWGC | 2 cut(s) | 56, 183 |
| TspDTI | ATGAA | 1 cut(s) | 42 |
| TspRI | CASTG | 1 cut(s) | 291 |
| XapI | RAATTY | 1 cut(s) | 300 |
| XbaI | TCTAGA | 1 cut(s) | 7 |
| XspI | CTAG | 2 cut(s) | 8, 80 |