Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006195

Physical Location & Seq

Genomic Coordinates Forward (+)

31670972 .. 31675854

Gene Structure 4883 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24375

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2523 bp

ATGGCCACCATGGCGCTACCTGAGGCGAGCACAAGGCTTCCCTTAGGCTCTTTAACCCATATAGACATAAGCACCCTCTCTCAGTCGGAGCTCCACGCCCTCTCTCTCTTGTCCTTGCACCGCTGCGGCACTGACGACCTGGTGGTCCCCAAAATCGACCGATCCCAATTCAATGAGAGCGCCGGGTCCCGCCGCCAGACCTACTCCCGCCTCCGGCGCCCCCAGTCGGATGCGTCGACGGGCCATCGGCGGCGCGTGGCAGGCCTCCTCTCTACTCCGAAAGTGTCACCACCCCCGGCCCAAGCTGACGACCCGGAACGCAACGAGAACCATGCCATCATCGCCCACCTCAAGCACTTGATTTCCCAGGATCCCAAATTCGATCAAATAGACTTGGAGCCCACCTCGACGACGACGACGATGGCGTCCTTGTTTTTGGACAAGAAGGTTGGAATTGCAGAATTAGGTGTGAGGAAGAGGAAACGAGGGAGGAAGCCCAAAGTGAAAGGGTCAGCAGGGTCCAGTGGCGAGGTACTGGGCATGCAGATTGTAAACAAGAACGGCGCTGCAGTTGACATCTGGGCTTTGCAGAACTCAGAAAACCCTTTTGGGGATGAGCTGAGGAGGAGGACGTTGGGTCTGGAGACTGAGGAGGAGTTGTTGGGTTTCATGAGGGAATTGGGTGGCCAGTGGGGGAGCAGGAGGAAGAAGAGGAAGATTGTCGACGCCACTGAATTCGGGGATGCCTTGCCTCTCGGTTGGAAGCTCTTGCTCGGCCTCAAGCGCAAGGAACGACGTGCTTGGATTTACTGCCGCCGATACATTAGCCCTACTGGACAACAATTTCTGTCCTGCAAGGAAGTTGCTTCTTTTTTGGAGTCCTTCTTTGGTCTTAATAATGCTGAAAGGCAAGATGGTGATGGTGATGGTGGTGAGAACATTCGGGAGGACTGTGTAATGGCTACCGAAAATCATGCTGATAAAGATGGAAAAAGAAGGCAAGATGTGAGCTCCAGCTCTGCTATACTGGTGTCTTCTATATCTAATGAGCCTGAGAATAAAGTTAGCGTATCAGAAATGGAAAATCTTGCTGAGGTTCAGATACATGACCTTTTTGAATGTCACAAATGCAGTATGACTTTTGCCGAGAAGGATTCATATTTGCAGCATCTATTGTCCTTTCACCAGAGGACTACAAGGAGGTATAGACTTGGTTCGACAGTTGGGGACGGTGTGATAATTAAGGATGGGAAATATGAGTGCCAGTTCTGCCATAAGGTATTTCTGGAAAGGCGTCGCTATAATGGGCATGTAGGAATCCATGTTCGAAATTATGTGAGGAGGGTGGAAGAGTCGCCAGCTCCAACAACTCTTCAAAAGAAAATAGAGTCTCCAACAAGGGAAGGTTTGCTATCAAGGAACTCTAAAATGGATGCTTTGATTGAAATTGCTCAAAACTCTATCCTCGAAACCTCCACTGCTGGACCAAATGAGGAATTAAAAGGTGGTACTACACCAGATCCATACATCAATATTAGTTCAGAAACTCCCGCTTCCAATAAACTCCCTTCCAATTCTCATCTAGAAATGAACATAGAATCTAAACTGACTGAACAGGACCTGGAAGATCTTATGATTGATGGAATTAATGAAGATGAGCAAGAGAGTGAGCATACAATAACTGATGGAAGTATGGAGGAAGTTGTTGATGCTATGGAAGTTGTAGATGATAAGGTGAATTCTTGTTTGGTTACCACTGCCTCATCTGCTGAAGAGAAAAATGGGAAGACATCTGAAAGGTCTGTGGAGATAAATGGTCTGGCACCCACCTCTGATGAATTGGAGATGTCTGGCACCAAGCAGGAGAATGCTTCTGAATGTCCCCATGTACATGCTTCTTCAAATAATAAATCTATTAGTGATGTTGCGGACAATGTAAAATGTGCACCTGCATTAGAGCATCCCAGTCCCGTTGAAGTCGATAAACAAAAGCATACTGAACCAATTGGTAGCATCGTTCAACCTCAACCAGCTAATGATAGTTCCTTAGAGTTCCATGCTTCTAACAGAAATGAACTCCAAAGTGGGGTTTGTGACACCTCAATGTCATTGGTGCGACCATTGCTCTGTCTTCCCACATCCAATGCAATTTTGCAGAAGGGAGATGAACATCTTATTGGTGTTGGCCAGAGCGGTGACCATGTAATGGATCTAGAGGATCTGCAACAACATGAAATAGAACATCTGAAGCATGGTTCTGCTGCTGGGCAAGAATCTTTTATACTAGAGGAGGTACCGATTGATATGACAAATAGTTCAGAGATGCAAAAACCAGTTGGTTCCTCTGTCCAGTTTGAACCAGAAGAAGTGATGCTAAACATGGCTGGCAGCAATCAGCTTACAACTGCTTGTATCTGGTGTGGAGTAGATTTCAAACACGAGGCTGTTGATTATGATGTACAACCCGATTCGGTTGGCTTTATGTGTCCAGTGTGCAAGGCAAAAATTTCTGAACGTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBD

Protein Analysis

840

Amino Acids

92.87

Weight (kDa)

5.32

Isoelectric Point (pI)

61.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006195)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22310 AT1G22310
fragaria_vesca	FvH4_2g11920 FvH4_2g11920
malus_domestica	MD05G1043400.v1.1 MD10G1050700.v1.1
prunus_persica	Prupe.8G062800_v2.0.a1 Prupe.8G062800_v2.0.a1
pyrus_communis	pycom05g03580 pycom05g03610 pycom10g03570
rosa_chinensis	RchiOBHm_Chr6g0271611 RchiOBHm_Chr6g0271621 RchiOBHm_Chr6g0271751 RchiOBHm_Chr6g0271781
rosa_laevigata	RLG00000013717 RLG00000013732
rosa_multiflora	Rmu_co8510743.1_g000001 Rmu_sc0002396.1_g000008
rosa_roxburghii	Rroxscaffold_173G00435060 Rroxscaffold_7G00196650
rosa_rugosa	Rorug06G0062300
rosa_samantha	Rh6AG181100 Rh6BG186200 Rh6CG180700 Rh6CG181600
rosa_wichuraiana	Rw6G015530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1957
AasI	GACNNNNNNGTC	2 cut(s)	143, 424
Acc36I	ACCTGC	1 cut(s)	1957
Acc65I	GGTACC	1 cut(s)	2293
AccB1I	GGYRCC	4 cut(s)	216, 1822, 1853, 2293
AccB7I	CCANNNNNTGG	1 cut(s)	2206
AccBSI	CCGCTC	1 cut(s)	2193
AccI	GTMKAC	2 cut(s)	236, 723
AccII	CGCG	1 cut(s)	255
AclWI	GGATC	6 cut(s)	156, 365, 378, 1514, 2217, 2226
AcoI	YGGCCR	3 cut(s)	3, 685, 2185
AcsI	RAATTY	4 cut(s)	377, 734, 1738, 2505
AcuI	CTGAAG	2 cut(s)	1791, 2267
AcyI	GRCGYC	4 cut(s)	217, 425, 726, 1294
AfaI	GTAC	5 cut(s)	534, 1510, 1890, 2295, 2460
AfiI	CCNNNNNNNGG	5 cut(s)	213, 226, 610, 2086, 2206
AgsI	TTSAA	9 cut(s)	172, 1118, 1376, 1445, 1902, 1976, 2021, 2357, 2434
AhdI	GACNNNNNGTC	1 cut(s)	636
AjiI	CACGTC	1 cut(s)	797
AjnI	CCWGG	3 cut(s)	138, 366, 1620
AjuI	GAANNNNNNNTTGG	6 cut(s)	591, 623, 1730, 1762, 2160, 2192
AloI	GAACNNNNNNTCC	2 cut(s)	1308, 1340
AluBI	AGCT	9 cut(s)	91, 305, 619, 766, 1011, 1017, 1361, 2033, 2398
AluI	AGCT	9 cut(s)	91, 305, 619, 766, 1011, 1017, 1361, 2033, 2398
Alw21I	GWGCWC	4 cut(s)	32, 93, 1013, 1948
Alw26I	GTCTC	2 cut(s)	638, 1395
Alw44I	GTGCAC	1 cut(s)	1944
AlwI	GGATC	6 cut(s)	156, 365, 378, 1514, 2217, 2226
AlwNI	CAGNNNCTG	1 cut(s)	1621
AoxI	GGCC	7 cut(s)	3, 241, 262, 297, 685, 775, 2185
ApaLI	GTGCAC	1 cut(s)	1944
ApeKI	GCWGC	5 cut(s)	123, 566, 1165, 2261, 2388
ApoI	RAATTY	4 cut(s)	377, 734, 1738, 2505
AseI	ATTAAT	1 cut(s)	1647
Asp718I	GGTACC	1 cut(s)	2293
AspLEI	GCGC	6 cut(s)	16, 182, 219, 255, 566, 786
AspS9I	GGNCC	7 cut(s)	145, 186, 241, 298, 519, 1484, 1618
AsuC2I	CCSGG	3 cut(s)	184, 296, 314
AsuHPI	GGTGA	7 cut(s)	279, 929, 935, 944, 1175, 1747, 2207
AsuII	TTCGAA	1 cut(s)	1327
AvaII	GGWCC	5 cut(s)	145, 186, 519, 1484, 1618
AxyI	CCTNAGG	2 cut(s)	21, 43
BaeGI	GKGCMC	1 cut(s)	1948
BalI	TGGCCA	3 cut(s)	5, 687, 2187
BamHI	GGATCC	1 cut(s)	370
BanI	GGYRCC	4 cut(s)	216, 1822, 1853, 2293
BanII	GRGCYC	3 cut(s)	93, 402, 1013
BauI	CACGAG	1 cut(s)	2438
BbsI	GAAGAC	3 cut(s)	1026, 1793, 2123
Bbv12I	GWGCWC	4 cut(s)	32, 93, 1013, 1948
BbvCI	CCTCAGC	2 cut(s)	620, 1092
BbvI	GCAGC	5 cut(s)	110, 553, 1177, 2248, 2400
BceAI	ACGGC	1 cut(s)	577
BcgI	CGANNNNNNTGC	4 cut(s)	314, 348, 956, 990
BciT130I	CCWGG	3 cut(s)	140, 368, 1622
BcnI	CCSGG	3 cut(s)	184, 296, 314
BcoDI	GTCTC	2 cut(s)	638, 1395
BfaI	CTAG	3 cut(s)	1583, 2213, 2285
BfmI	CTRYAG	1 cut(s)	567
BfoI	RGCGCY	4 cut(s)	17, 183, 220, 567
BfuAI	ACCTGC	1 cut(s)	1957
BglI	GCCNNNNNGGC	1 cut(s)	11
BglII	AGATCT	1 cut(s)	1627
BisI	GCNGC	9 cut(s)	124, 127, 193, 251, 567, 814, 1166, 2262, 2389
BlsI	GCNGC	9 cut(s)	125, 128, 194, 252, 568, 815, 1167, 2263, 2390
Bme1390I	CCNGG	6 cut(s)	140, 184, 296, 314, 368, 1622
Bme18I	GGWCC	5 cut(s)	145, 186, 519, 1484, 1618
BmeRI	GACNNNNNGTC	1 cut(s)	636
BmgBI	CACGTC	1 cut(s)	797
BmgT120I	GGNCC	7 cut(s)	145, 186, 241, 298, 519, 1484, 1618
BmrFI	CCNGG	6 cut(s)	140, 184, 296, 314, 368, 1622
BmrI	ACTGGG	3 cut(s)	217, 545, 1959
BmsI	GCATC	9 cut(s)	220, 733, 1177, 1423, 1699, 1969, 2022, 2313, 2361
BmuI	ACTGGG	3 cut(s)	217, 545, 1959
BpiI	GAAGAC	3 cut(s)	1026, 1793, 2123
BplI	GAGNNNNNCTC	2 cut(s)	389, 421
BpmI	CTGGAG	2 cut(s)	662, 997
Bpu10I	CCTNAGC	2 cut(s)	620, 1092
Bpu14I	TTCGAA	1 cut(s)	1327
BpuEI	CTTGAG	2 cut(s)	335, 764
BpuMI	CCSGG	3 cut(s)	184, 296, 314
BsaBI	GATNNNNATC	1 cut(s)	2169
BsaHI	GRCGYC	4 cut(s)	217, 425, 726, 1294
BsaJI	CCNNGG	3 cut(s)	9, 294, 366
BsaXI	ACNNNNNCTCC	2 cut(s)	644, 674
Bsc4I	CCNNNNNNNGG	5 cut(s)	213, 226, 610, 2086, 2206
Bse21I	CCTNAGG	2 cut(s)	21, 43
Bse3DI	GCAATG	1 cut(s)	2120
Bse8I	GATNNNNATC	1 cut(s)	2169
BseBI	CCWGG	3 cut(s)	140, 368, 1622
BseDI	CCNNGG	3 cut(s)	9, 294, 366
BseGI	GGATG	7 cut(s)	235, 619, 748, 1252, 1438, 1960, 2138
BseJI	GATNNNNATC	1 cut(s)	2169
BseLI	CCNNNNNNNGG	5 cut(s)	213, 226, 610, 2086, 2206
BseMI	GCAATG	1 cut(s)	2120
BseMII	CTCAG	7 cut(s)	12, 95, 609, 611, 639, 1044, 1083
BseRI	GAGGAG	7 cut(s)	257, 637, 640, 665, 668, 1354, 2303
BseSI	GKGCMC	1 cut(s)	1948
BseXI	GCAGC	5 cut(s)	110, 553, 1177, 2248, 2400
BseYI	CCCAGC	1 cut(s)	2264
Bsh1236I	CGCG	1 cut(s)	255
Bsh1285I	CGRYCG	1 cut(s)	160
BshFI	GGCC	7 cut(s)	5, 243, 264, 299, 687, 777, 2187
BshNI	GGYRCC	4 cut(s)	216, 1822, 1853, 2293
BsiEI	CGRYCG	1 cut(s)	160
BsiHKAI	GWGCWC	4 cut(s)	32, 93, 1013, 1948
BsiSI	CCGG	4 cut(s)	183, 214, 296, 314
BslFI	GGGAC	5 cut(s)	131, 172, 1241, 1866, 1953
BslI	CCNNNNNNNGG	5 cut(s)	213, 226, 610, 2086, 2206
BsmAI	GTCTC	2 cut(s)	638, 1395
BsmFI	GGGAC	5 cut(s)	131, 172, 1241, 1866, 1953
BsmI	GAATGC	1 cut(s)	1873
BsnI	GGCC	7 cut(s)	5, 243, 264, 299, 687, 777, 2187
Bsp119I	TTCGAA	1 cut(s)	1327
Bsp1286I	GDGCHC	5 cut(s)	32, 93, 402, 1013, 1948
Bsp1407I	TGTACA	2 cut(s)	1888, 2458
Bsp143I	GATC	7 cut(s)	161, 370, 382, 1519, 1627, 2209, 2218
Bsp19I	CCATGG	1 cut(s)	9
BspANI	GGCC	7 cut(s)	5, 243, 264, 299, 687, 777, 2187
BspCNI	CTCAG	7 cut(s)	13, 94, 608, 612, 640, 1045, 1084
BspFNI	CGCG	1 cut(s)	255
BspHI	TCATGA	1 cut(s)	669
BspMAI	CTGCAG	1 cut(s)	571
BspMI	ACCTGC	1 cut(s)	1957
BspPI	GGATC	6 cut(s)	156, 365, 378, 1514, 2217, 2226
BspT104I	TTCGAA	1 cut(s)	1327
BspT107I	GGYRCC	4 cut(s)	216, 1822, 1853, 2293
BsrBI	CCGCTC	1 cut(s)	2193
BsrDI	GCAATG	1 cut(s)	2120
BsrGI	TGTACA	2 cut(s)	1888, 2458
BssECI	CCNNGG	3 cut(s)	9, 294, 366
BssMI	GATC	7 cut(s)	161, 370, 382, 1519, 1627, 2209, 2218
BssNI	GRCGYC	4 cut(s)	217, 425, 726, 1294
BssSI	CACGAG	1 cut(s)	2438
BssT1I	CCWWGG	1 cut(s)	9
Bst2BI	CACGAG	1 cut(s)	2438
Bst2UI	CCWGG	3 cut(s)	140, 368, 1622
Bst4CI	ACNGT	3 cut(s)	953, 1222, 1232
Bst6I	CTCTTC	5 cut(s)	470, 704, 1344, 1377, 1767
BstACI	GRCGYC	4 cut(s)	217, 425, 726, 1294
BstAUI	TGTACA	2 cut(s)	1888, 2458
BstBI	TTCGAA	1 cut(s)	1327
BstC8I	GCNNGC	5 cut(s)	28, 262, 542, 1359, 2386
BstDEI	CTNAG	9 cut(s)	21, 43, 81, 595, 620, 648, 1053, 1092, 2047
BstDSI	CCRYGG	1 cut(s)	9
BstEII	GGTNACC	2 cut(s)	1750, 2195
BstF5I	GGATG	7 cut(s)	235, 619, 748, 1252, 1438, 1960, 2138
BstFNI	CGCG	1 cut(s)	255
BstH2I	RGCGCY	4 cut(s)	17, 183, 220, 567
BstHHI	GCGC	6 cut(s)	16, 182, 219, 255, 566, 786
BstKTI	GATC	7 cut(s)	164, 373, 385, 1522, 1630, 2212, 2221
BstMAI	GTCTC	2 cut(s)	638, 1395
BstMBI	GATC	7 cut(s)	161, 370, 382, 1519, 1627, 2209, 2218
BstMCI	CGRYCG	1 cut(s)	160
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 216, 261, 341, 783, 1269, 1766, 2122
BstNI	CCWGG	3 cut(s)	140, 368, 1622
BstNSI	RCATGY	3 cut(s)	544, 1313, 1895
BstPI	GGTNACC	2 cut(s)	1750, 2195
BstSCI	CCNGG	6 cut(s)	138, 182, 294, 312, 366, 1620
BstSFI	CTRYAG	1 cut(s)	567
BstSLI	GKGCMC	1 cut(s)	1948
BstUI	CGCG	1 cut(s)	255
BstV1I	GCAGC	5 cut(s)	110, 553, 1177, 2248, 2400
BstV2I	GAAGAC	3 cut(s)	1026, 1793, 2123
BstX2I	RGATCY	5 cut(s)	370, 1519, 1627, 2209, 2218
BstYI	RGATCY	5 cut(s)	370, 1519, 1627, 2209, 2218
Bsu36I	CCTNAGG	2 cut(s)	21, 43
BsuRI	GGCC	7 cut(s)	5, 243, 264, 299, 687, 777, 2187
BtgI	CCRYGG	1 cut(s)	9
BtgZI	GCGATG	1 cut(s)	325
BtrI	CACGTC	1 cut(s)	797
BtsCI	GGATG	7 cut(s)	235, 619, 748, 1252, 1438, 1960, 2138
BtsI	GCAGTG	2 cut(s)	1476, 1755
BtsIMutI	CAGTG	7 cut(s)	129, 529, 695, 729, 1476, 1755, 2496
BveI	ACCTGC	1 cut(s)	1957
Cac8I	GCNNGC	5 cut(s)	28, 262, 542, 1359, 2386
CaiI	CAGNNNCTG	1 cut(s)	1621
CciI	TCATGA	1 cut(s)	669
CfoI	GCGC	6 cut(s)	16, 182, 219, 255, 566, 786
Cfr13I	GGNCC	7 cut(s)	145, 186, 241, 298, 519, 1484, 1618
CseI	GACGC	4 cut(s)	222, 414, 734, 1283
CsiI	ACCWGGT	1 cut(s)	138
Csp6I	GTAC	5 cut(s)	533, 1509, 1889, 2294, 2459
CviQI	GTAC	5 cut(s)	533, 1509, 1889, 2294, 2459
DdeI	CTNAG	9 cut(s)	21, 43, 81, 595, 620, 648, 1053, 1092, 2047
DinI	GGCGCC	1 cut(s)	218
DpnI	GATC	7 cut(s)	163, 372, 384, 1521, 1629, 2211, 2220
DpnII	GATC	7 cut(s)	161, 370, 382, 1519, 1627, 2209, 2218
DrdI	GACNNNNNNGTC	2 cut(s)	143, 424
DriI	GACNNNNNGTC	1 cut(s)	636
DseDI	GACNNNNNNGTC	2 cut(s)	143, 424
EaeI	YGGCCR	3 cut(s)	3, 685, 2185
Eam1104I	CTCTTC	5 cut(s)	470, 704, 1344, 1377, 1767
Eam1105I	GACNNNNNGTC	1 cut(s)	636
EarI	CTCTTC	5 cut(s)	470, 704, 1344, 1377, 1767
Ecl136II	GAGCTC	2 cut(s)	91, 1011
Eco130I	CCWWGG	1 cut(s)	9
Eco147I	AGGCCT	1 cut(s)	264
Eco24I	GRGCYC	3 cut(s)	93, 402, 1013
Eco47I	GGWCC	5 cut(s)	145, 186, 519, 1484, 1618
Eco53kI	GAGCTC	2 cut(s)	91, 1011
Eco57I	CTGAAG	2 cut(s)	1791, 2267
Eco81I	CCTNAGG	2 cut(s)	21, 43
Eco91I	GGTNACC	2 cut(s)	1750, 2195
EcoICRI	GAGCTC	2 cut(s)	91, 1011
EcoO109I	RGGNCCY	2 cut(s)	186, 1618
EcoO65I	GGTNACC	2 cut(s)	1750, 2195
EcoRI	GAATTC	2 cut(s)	734, 1738
EcoRII	CCWGG	3 cut(s)	138, 366, 1620
EcoT14I	CCWWGG	1 cut(s)	9
EcoT38I	GRGCYC	3 cut(s)	93, 402, 1013
EgeI	GGCGCC	1 cut(s)	218
EheI	GGCGCC	1 cut(s)	218
ErhI	CCWWGG	1 cut(s)	9
FaqI	GGGAC	5 cut(s)	131, 172, 1241, 1866, 1953
FauI	CCCGC	3 cut(s)	197, 215, 1558
FblI	GTMKAC	2 cut(s)	236, 723
Fnu4HI	GCNGC	9 cut(s)	124, 127, 193, 251, 567, 814, 1166, 2262, 2389
FokI	GGATG	7 cut(s)	242, 626, 755, 1259, 1445, 1947, 2125
FriOI	GRGCYC	3 cut(s)	93, 402, 1013
Fsp4HI	GCNGC	9 cut(s)	124, 127, 193, 251, 567, 814, 1166, 2262, 2389
FspBI	CTAG	3 cut(s)	1583, 2213, 2285
GlaI	GCGC	6 cut(s)	15, 181, 218, 254, 565, 785
GluI	GCNGC	9 cut(s)	124, 127, 193, 251, 567, 814, 1166, 2262, 2389
GsaI	CCCAGC	1 cut(s)	2268
GsuI	CTGGAG	2 cut(s)	662, 997
HaeII	RGCGCY	4 cut(s)	17, 183, 220, 567
HaeIII	GGCC	7 cut(s)	5, 243, 264, 299, 687, 777, 2187
HapII	CCGG	4 cut(s)	183, 214, 296, 314
HgaI	GACGC	4 cut(s)	222, 414, 734, 1283
HhaI	GCGC	6 cut(s)	16, 182, 219, 255, 566, 786
Hin1I	GRCGYC	4 cut(s)	217, 425, 726, 1294
Hin6I	GCGC	6 cut(s)	14, 180, 217, 253, 564, 784
HinP1I	GCGC	6 cut(s)	14, 180, 217, 253, 564, 784
HincII	GTYRAC	3 cut(s)	237, 574, 724
HindII	GTYRAC	3 cut(s)	237, 574, 724
HinfI	GANTC	8 cut(s)	878, 1154, 1317, 1352, 1388, 1598, 2273, 2468
HpaII	CCGG	4 cut(s)	183, 214, 296, 314
HphI	GGTGA	7 cut(s)	279, 929, 935, 944, 1175, 1747, 2207
Hpy166II	GTNNAC	5 cut(s)	237, 553, 574, 724, 1946
Hpy188III	TCNNGA	6 cut(s)	641, 670, 944, 1286, 1583, 2213
Hpy8I	GTNNAC	5 cut(s)	237, 553, 574, 724, 1946
Hpy99I	CGWCG	9 cut(s)	238, 241, 412, 415, 418, 421, 728, 798, 1299
HpyAV	CCTTC	7 cut(s)	439, 892, 990, 1144, 1397, 1578, 2152
HpyCH4III	ACNGT	3 cut(s)	953, 1222, 1232
HpyCH4IV	ACGT	3 cut(s)	632, 796, 2515
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 216, 261, 341, 783, 1269, 1766, 2122
HpyF3I	CTNAG	9 cut(s)	21, 43, 81, 595, 620, 648, 1053, 1092, 2047
HpySE526I	ACGT	3 cut(s)	632, 796, 2515
Hsp92I	GRCGYC	4 cut(s)	217, 425, 726, 1294
HspAI	GCGC	6 cut(s)	14, 180, 217, 253, 564, 784
KasI	GGCGCC	1 cut(s)	216
KflI	GGGWCCC	1 cut(s)	186
KpnI	GGTACC	1 cut(s)	2297
Kzo9I	GATC	7 cut(s)	161, 370, 382, 1519, 1627, 2209, 2218
LmnI	GCTCC	6 cut(s)	88, 96, 397, 696, 1016, 1366
Lsp1109I	GCAGC	5 cut(s)	110, 553, 1177, 2248, 2400
LweI	GCATC	9 cut(s)	220, 733, 1177, 1423, 1699, 1969, 2022, 2313, 2361
MabI	ACCWGGT	1 cut(s)	138
MaeI	CTAG	3 cut(s)	1583, 2213, 2285
MaeII	ACGT	3 cut(s)	632, 796, 2515
MaeIII	GTNAC	5 cut(s)	285, 1121, 1750, 2093, 2195
MalI	GATC	7 cut(s)	163, 372, 384, 1521, 1629, 2211, 2220
MbiI	CCGCTC	1 cut(s)	2193
MboI	GATC	7 cut(s)	161, 370, 382, 1519, 1627, 2209, 2218
MfeI	CAATTG	1 cut(s)	2004
MflI	RGATCY	5 cut(s)	370, 1519, 1627, 2209, 2218
MhlI	GDGCHC	5 cut(s)	32, 93, 402, 1013, 1948
MlsI	TGGCCA	3 cut(s)	5, 687, 2187
MluNI	TGGCCA	3 cut(s)	5, 687, 2187
Mly113I	GGCGCC	1 cut(s)	217
MlyI	GAGTC	3 cut(s)	887, 1361, 1397
MmeI	TCCRAC	6 cut(s)	66, 207, 430, 740, 1388, 1418
Mox20I	TGGCCA	3 cut(s)	5, 687, 2187
MscI	TGGCCA	3 cut(s)	5, 687, 2187
MseI	TTAA	5 cut(s)	53, 894, 1242, 1499, 1647
MslI	CAYNNNNRTG	2 cut(s)	1890, 2102
Msp20I	TGGCCA	3 cut(s)	5, 687, 2187
MspA1I	CMGCKG	1 cut(s)	123
MspI	CCGG	4 cut(s)	183, 214, 296, 314
MspR9I	CCNGG	6 cut(s)	140, 184, 296, 314, 368, 1622
MunI	CAATTG	1 cut(s)	2004
Mva1269I	GAATGC	1 cut(s)	1873
MvaI	CCWGG	3 cut(s)	140, 368, 1622
MvnI	CGCG	1 cut(s)	255
MwoI	GCNNNNNNNGC	8 cut(s)	11, 216, 261, 341, 783, 1269, 1766, 2122
NarI	GGCGCC	1 cut(s)	217
NciI	CCSGG	3 cut(s)	184, 296, 314
NcoI	CCATGG	1 cut(s)	9
NdeII	GATC	7 cut(s)	161, 370, 382, 1519, 1627, 2209, 2218
NmeAIII	GCCGAG	2 cut(s)	753, 1171
NmuCI	GTSAC	4 cut(s)	285, 1121, 2093, 2195
NspI	RCATGY	3 cut(s)	544, 1313, 1895
NspV	TTCGAA	1 cut(s)	1327
PaeI	GCATGC	1 cut(s)	544
PagI	TCATGA	1 cut(s)	669
PaqCI	CACCTGC	1 cut(s)	1957
PceI	AGGCCT	1 cut(s)	264
PcsI	WCGNNNNNNNCGW	4 cut(s)	233, 413, 416, 422
PctI	GAATGC	1 cut(s)	1873
PfeI	GAWTC	5 cut(s)	1154, 1317, 1598, 2273, 2468
PflMI	CCANNNNNTGG	1 cut(s)	2206
PkrI	GCNGC	9 cut(s)	125, 128, 194, 252, 568, 815, 1167, 2263, 2390
PleI	GAGTC	3 cut(s)	886, 1360, 1396
PluTI	GGCGCC	1 cut(s)	220
PpsI	GAGTC	3 cut(s)	886, 1360, 1396
PpuMI	RGGWCCY	2 cut(s)	186, 1618
PshBI	ATTAAT	1 cut(s)	1647
Psp124BI	GAGCTC	2 cut(s)	93, 1013
Psp5II	RGGWCCY	2 cut(s)	186, 1618
Psp6I	CCWGG	3 cut(s)	138, 366, 1620
PspEI	GGTNACC	2 cut(s)	1750, 2195
PspFI	CCCAGC	1 cut(s)	2264
PspGI	CCWGG	3 cut(s)	138, 366, 1620
PspPI	GGNCC	7 cut(s)	145, 186, 241, 298, 519, 1484, 1618
PspPPI	RGGWCCY	2 cut(s)	186, 1618
PstI	CTGCAG	1 cut(s)	571
PstNI	CAGNNNCTG	1 cut(s)	1621
PsuI	RGATCY	5 cut(s)	370, 1519, 1627, 2209, 2218
RsaI	GTAC	5 cut(s)	534, 1510, 1890, 2295, 2460
RsaNI	GTAC	5 cut(s)	533, 1509, 1889, 2294, 2459
RseI	CAYNNNNRTG	2 cut(s)	1890, 2102
SacI	GAGCTC	2 cut(s)	93, 1013
SalI	GTCGAC	2 cut(s)	235, 722
SaqAI	TTAA	5 cut(s)	53, 894, 1242, 1499, 1647
SatI	GCNGC	9 cut(s)	124, 127, 193, 251, 567, 814, 1166, 2262, 2389
Sau3AI	GATC	7 cut(s)	161, 370, 382, 1519, 1627, 2209, 2218
Sau96I	GGNCC	7 cut(s)	145, 186, 241, 298, 519, 1484, 1618
SchI	GAGTC	3 cut(s)	887, 1361, 1397
ScrFI	CCNGG	6 cut(s)	140, 184, 296, 314, 368, 1622
SduI	GDGCHC	5 cut(s)	32, 93, 402, 1013, 1948
SexAI	ACCWGGT	1 cut(s)	138
SfaNI	GCATC	9 cut(s)	220, 733, 1177, 1423, 1699, 1969, 2022, 2313, 2361
SfcI	CTRYAG	1 cut(s)	567
SfoI	GGCGCC	1 cut(s)	218
SfuI	TTCGAA	1 cut(s)	1327
SgrDI	CGTCGACG	1 cut(s)	235
SinI	GGWCC	5 cut(s)	145, 186, 519, 1484, 1618
SmiMI	CAYNNNNRTG	2 cut(s)	1890, 2102
SmlI	CTYRAG	2 cut(s)	350, 779
SmoI	CTYRAG	2 cut(s)	350, 779
SphI	GCATGC	1 cut(s)	544
SseBI	AGGCCT	1 cut(s)	264
SspDI	GGCGCC	1 cut(s)	216
SspI	AATATT	1 cut(s)	1534
SspMI	CTAG	3 cut(s)	1583, 2213, 2285
SstI	GAGCTC	2 cut(s)	93, 1013
StuI	AGGCCT	1 cut(s)	264
StyD4I	CCNGG	6 cut(s)	138, 182, 294, 312, 366, 1620
StyI	CCWWGG	1 cut(s)	9
TaaI	ACNGT	3 cut(s)	953, 1222, 1232
TaiI	ACGT	3 cut(s)	635, 799, 2518
TaqI	TCGA	9 cut(s)	156, 236, 381, 407, 723, 1217, 1327, 1467, 1980
TaqII	GACCGA	1 cut(s)	174
TatI	WGTACW	2 cut(s)	1888, 2458
TauI	GCSGC	4 cut(s)	129, 195, 253, 816
TfiI	GAWTC	5 cut(s)	1154, 1317, 1598, 2273, 2468
Tru1I	TTAA	5 cut(s)	53, 894, 1242, 1499, 1647
Tru9I	TTAA	5 cut(s)	53, 894, 1242, 1499, 1647
TscAI	CASTG	7 cut(s)	136, 529, 695, 736, 1483, 1762, 2496
TseFI	GTSAC	4 cut(s)	285, 1121, 2093, 2195
TseI	GCWGC	5 cut(s)	123, 566, 1165, 2261, 2388
Tsp45I	GTSAC	4 cut(s)	285, 1121, 2093, 2195
TspDTI	ATGAA	8 cut(s)	658, 1146, 1604, 1665, 1851, 2088, 2181, 2247
TspRI	CASTG	7 cut(s)	136, 529, 695, 736, 1483, 1762, 2496
Van91I	CCANNNNNTGG	1 cut(s)	2206
VneI	GTGCAC	1 cut(s)	1944
VpaK11BI	GGWCC	5 cut(s)	145, 186, 519, 1484, 1618
VspI	ATTAAT	1 cut(s)	1647
XapI	RAATTY	4 cut(s)	377, 734, 1738, 2505
XbaI	TCTAGA	2 cut(s)	1582, 2212
XceI	RCATGY	3 cut(s)	544, 1313, 1895
XmiI	GTMKAC	2 cut(s)	236, 723
XspI	CTAG	3 cut(s)	1583, 2213, 2285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.