Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0006195

Physical Location & Seq

Genomic Coordinates Reverse (-)

36498610 .. 36505671

Gene Structure 7062 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013717

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2499 bp

ATGGCCACCATGGCGCTACCTGAGGCGAGCACAAGGCTTCCCTTAGGCTCTTTAATTCATATAGACATAAGCACCCTCTCTCAGTCGGAGCTCCACGCCCTCTCTCTCTTGTCCTTGAACCGCTGCGGCACTGACGACCTGGTGGTCCCCAAAATCGACCGATCCCAATTCAATGAGAGCGCCGGGTCCCGCCGCCAGACCTACTCCCGCCTCCGGCGCCCCCAGTCGGATGCGTCGACGGGCCATCGGCGGCGCGTGGCGGGCCTCCTCTCTACTCCGAAAAACCATGCCATCATCGCCCACCTCAAGCATTTGATTTCCCAGGATCCCAAATTCGATCAAATCGACTTGGAGCCCGCCTCGACGACGACGACGATGGCGTCCTTGTTTTTGGACAAGAAGGTTGGAATTGCAGAATTAGGTGTGAGGAAGAGGAAACGAGGGAGGAAGCCCAAAGTGAAAGGGTCAGCAGGGTCCAGTGGCGAGGTACTGGGCATGCAGATTGTAAACAAGAACGGCGCTGCAGTTGACATCTGGGCTTTGCAGAATTCAGAAAACCCTTTTGGGGATGAGCTGAGGAGGAGGACGTTGGGTCTGGAGACTGAGGAGGAGTTGTTGGGTTTCATGAGGGAATTGGGTGGCCAGTGGGGGAGCAGGAGGAAGAAGAGGAAGATTGTCGAAGCCACTGAATTCGGGGATGCCTTGCCCGTCGGTTGGAAGCTCTTGCTCGGCCTCAAACGCAAGGAACGACGTGCTTGGATTGGATTTACTGCCGCCGATACATTAGGTACTTCCTATCTCACTTCTCACTTATCCAATTCAATCCCTACTGGACAACAATTTCTGTCCTGCAAGGAAGTTGCTTCTTTTTTGGAGTCCTTCTTTGGTCTTAATAATGCTGAAAGGCAAGATGGTGATGGTGGTGAGAACATTCAGGAGGACTGCGTAATGGCTACCGAAAATCATGCTGATAAAGATGGAGAAAGAAGGCAAGATGTGAGCTCCAGCTCTGCTATACTGTTGTCTTCTATATCTAATGAGCCTGAGAATAAAGTTAGCGTATCGGAAATGGAAAATCTTGCTGAAGTTCAGATACATGACCTTTTTGAATGTCACAAATGCAGTATGACTTTTGCCGAGAAGGATTCATATTTGCAGCATCTATTGTCCTTTCACCAGAGGACTACAAGGAGGTATAGACTTGGTTCGACAGTTGGGGACGGTGTGATAATTAAGGATGGGAAATATGAGTGCCAGTTCTGCCATAAGGTATTTCTGGAAAGGCGTCGCTATAATGGGCATGTAGGAATCCATGTTCGAAATTATGTGAGGAGGGTGGAAGAGTCGCCAGCTCCAACAACTCTTCAAAAGAAAATAGAGTCTCCAACAAGGGAAGGTTTGCCATCAAGGAACTCTAAAATGGATGCTTTGATTGAAATTGCTCAAAACTCTATCCTCGAAACCTCCACTGCTGGACCAAATGAGGAATTAAAAGGAGGTACTACACCAGATCCATACATCAATATTAGTTCAGAAACTCCCGCTTCCAATTCTCATCTAGAAATGAACATAGAATCTAAACTGACTGAACAGGACCTGGAAGATCTTATGATTGATGGAATTAATGAAGACGAGCAAGAGAGTGAGCATACAATAACTGATGGAAGTATGGAGGAAGCTGTTGATGCTATGGAAGTTGTAGATGATAAGGTGAATTCTTGTTTGGTTACCACTGCCTCATCTGCTGAAGAGAAAAATGGGAAGACATCTGAAAGGTCTGTGGAGATAAATGGTCTGGCACCCACCTCTGATGAATTGGAGATGTCTGGCACCAAGCAGGAGAATGCTTCTGAATGTCCCCATGTACATGCTTCTTCAAATAATCAATCTATTAGTGATGTTGCGGACAATGTAAAATGCGCGCCTGCATTAGAGCATCCCAGTCCCGTTGAAGTCGATAAACAAAAGCATACTGAACGAATTGGTAGCATCGATCAACCTCGACCAGCTAATGATAGTTCCTTGGAGTTCCATGCTTCTAACAAAAATGAACTCCAAAGTGGGGTTTGTGACACCTCAATGTCATTGGTGCGACCATTGCTCTGTCTTCCCACATCCAATGCAATTTTGCAGAAGGGAGACGAACATCTTATTGGTGTTGGCCAGAGCGGTGACCATGTAATGGATCTAGAGGATCTGCAACAACATGAAATAGAACATCTGAAGCATGGTTCTGCTTCTGGGCAAGAATCTTTTATACTAGAGGAGGGACCAATTGATATGACAAATAGTTCAGAGATGCAAAAACCAGTTGGTTCCTCTGTCCAGTTTGAACCAGAAGAAGTGATGCTAAACATGGCTGGCAGCAATCAGCTTACAACTGCTTGTATCTGGTGTGGAGTAGATTTCAAACACGAGGCTGTCGATTATGATGTACAACCCGATTCTGTTGGCTTTATGTGTCCAGTGTGCAAGGCAAAAATTTCTGAACGTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBD

Protein Analysis

833

Amino Acids

91.7

Weight (kDa)

5.24

Isoelectric Point (pI)

58.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006195)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22310 AT1G22310
fragaria_vesca	FvH4_2g11920 FvH4_2g11920
malus_domestica	MD05G1043400.v1.1 MD10G1050700.v1.1
prunus_persica	Prupe.8G062800_v2.0.a1 Prupe.8G062800_v2.0.a1
pyrus_communis	pycom05g03580 pycom05g03610 pycom10g03570
rosa_chinensis	RchiOBHm_Chr6g0271611 RchiOBHm_Chr6g0271621 RchiOBHm_Chr6g0271751 RchiOBHm_Chr6g0271781
rosa_laevigata	RLG00000013717 RLG00000013732
rosa_multiflora	Rmu_co8510743.1_g000001 Rmu_sc0002396.1_g000008
rosa_roxburghii	Rroxscaffold_173G00435060 Rroxscaffold_7G00196650
rosa_rugosa	Rorug06G0062300
rosa_samantha	Rh6AG181100 Rh6BG186200 Rh6CG180700 Rh6CG181600
rosa_wichuraiana	Rw6G015530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	143, 379
AccB1I	GGYRCC	3 cut(s)	216, 1798, 1829
AccB7I	CCANNNNNTGG	1 cut(s)	2182
AccBSI	CCGCTC	1 cut(s)	2169
AccI	GTMKAC	1 cut(s)	236
AccII	CGCG	2 cut(s)	255, 1922
AclWI	GGATC	6 cut(s)	156, 320, 333, 1505, 2193, 2202
AcoI	YGGCCR	3 cut(s)	3, 640, 2161
AcsI	RAATTY	5 cut(s)	332, 547, 689, 1714, 2481
AcuI	CTGAAG	3 cut(s)	1104, 1767, 2243
AcyI	GRCGYC	3 cut(s)	217, 380, 1285
AfaI	GTAC	5 cut(s)	489, 790, 1501, 1866, 2436
AfiI	CCNNNNNNNGG	6 cut(s)	213, 226, 565, 714, 2062, 2182
AhdI	GACNNNNNGTC	1 cut(s)	591
AjiI	CACGTC	1 cut(s)	752
AjnI	CCWGG	3 cut(s)	138, 321, 1596
AjuI	GAANNNNNNNTTGG	6 cut(s)	546, 578, 1706, 1738, 2136, 2168
AloI	GAACNNNNNNTCC	2 cut(s)	1299, 1331
AluBI	AGCT	9 cut(s)	91, 574, 721, 1002, 1008, 1352, 1679, 2009, 2374
AluI	AGCT	9 cut(s)	91, 574, 721, 1002, 1008, 1352, 1679, 2009, 2374
Alw21I	GWGCWC	3 cut(s)	32, 93, 1004
Alw26I	GTCTC	3 cut(s)	593, 1386, 2133
AlwI	GGATC	6 cut(s)	156, 320, 333, 1505, 2193, 2202
AlwNI	CAGNNNCTG	1 cut(s)	1597
AoxI	GGCC	6 cut(s)	3, 241, 262, 640, 730, 2161
ApeKI	GCWGC	4 cut(s)	123, 521, 1156, 2364
ApoI	RAATTY	5 cut(s)	332, 547, 689, 1714, 2481
AseI	ATTAAT	1 cut(s)	1623
AspLEI	GCGC	7 cut(s)	16, 182, 219, 255, 521, 1922, 1924
AspS9I	GGNCC	8 cut(s)	145, 186, 241, 262, 474, 1475, 1594, 2270
AsuC2I	CCSGG	1 cut(s)	184
AsuHPI	GGTGA	5 cut(s)	926, 935, 1166, 1723, 2183
AsuII	TTCGAA	1 cut(s)	1318
AvaII	GGWCC	6 cut(s)	145, 186, 474, 1475, 1594, 2270
AxyI	CCTNAGG	2 cut(s)	21, 43
BalI	TGGCCA	3 cut(s)	5, 642, 2163
BamHI	GGATCC	1 cut(s)	325
BanI	GGYRCC	3 cut(s)	216, 1798, 1829
BanII	GRGCYC	3 cut(s)	93, 357, 1004
BarI	GAAGNNNNNNTAC	2 cut(s)	1077, 1109
BauI	CACGAG	1 cut(s)	2414
BbsI	GAAGAC	4 cut(s)	1017, 1635, 1769, 2099
Bbv12I	GWGCWC	3 cut(s)	32, 93, 1004
BbvCI	CCTCAGC	1 cut(s)	575
BbvI	GCAGC	4 cut(s)	110, 508, 1168, 2376
BceAI	ACGGC	1 cut(s)	532
BcgI	CGANNNNNNTGC	2 cut(s)	947, 981
BciT130I	CCWGG	3 cut(s)	140, 323, 1598
BcnI	CCSGG	1 cut(s)	184
BcoDI	GTCTC	3 cut(s)	593, 1386, 2133
BfaI	CTAG	3 cut(s)	1559, 2189, 2261
BfmI	CTRYAG	1 cut(s)	522
BfoI	RGCGCY	4 cut(s)	17, 183, 220, 522
BglI	GCCNNNNNGGC	1 cut(s)	11
BglII	AGATCT	1 cut(s)	1603
BisI	GCNGC	8 cut(s)	124, 127, 193, 251, 522, 774, 1157, 2365
BlsI	GCNGC	8 cut(s)	125, 128, 194, 252, 523, 775, 1158, 2366
Bme1390I	CCNGG	4 cut(s)	140, 184, 323, 1598
Bme18I	GGWCC	6 cut(s)	145, 186, 474, 1475, 1594, 2270
BmeRI	GACNNNNNGTC	1 cut(s)	591
BmgBI	CACGTC	1 cut(s)	752
BmgT120I	GGNCC	8 cut(s)	145, 186, 241, 262, 474, 1475, 1594, 2270
BmrFI	CCNGG	4 cut(s)	140, 184, 323, 1598
BmrI	ACTGGG	3 cut(s)	217, 500, 1935
BmsI	GCATC	9 cut(s)	220, 688, 1168, 1414, 1675, 1945, 1998, 2289, 2337
BmuI	ACTGGG	3 cut(s)	217, 500, 1935
BpiI	GAAGAC	4 cut(s)	1017, 1635, 1769, 2099
BplI	GAGNNNNNCTC	2 cut(s)	344, 376
BpmI	CTGGAG	2 cut(s)	617, 988
Bpu10I	CCTNAGC	1 cut(s)	575
Bpu14I	TTCGAA	1 cut(s)	1318
BpuEI	CTTGAG	1 cut(s)	290
BpuMI	CCSGG	1 cut(s)	184
Bsa29I	ATCGAT	1 cut(s)	1992
BsaHI	GRCGYC	3 cut(s)	217, 380, 1285
BsaJI	CCNNGG	3 cut(s)	9, 321, 2022
BsaXI	ACNNNNNCTCC	2 cut(s)	599, 629
Bsc4I	CCNNNNNNNGG	6 cut(s)	213, 226, 565, 714, 2062, 2182
Bse21I	CCTNAGG	2 cut(s)	21, 43
Bse3DI	GCAATG	1 cut(s)	2096
BseBI	CCWGG	3 cut(s)	140, 323, 1598
BseCI	ATCGAT	1 cut(s)	1992
BseDI	CCNNGG	3 cut(s)	9, 321, 2022
BseGI	GGATG	7 cut(s)	235, 574, 703, 1243, 1429, 1936, 2114
BseLI	CCNNNNNNNGG	6 cut(s)	213, 226, 565, 714, 2062, 2182
BseMI	GCAATG	1 cut(s)	2096
BseMII	CTCAG	5 cut(s)	12, 95, 566, 594, 1035
BsePI	GCGCGC	1 cut(s)	1920
BseRI	GAGGAG	7 cut(s)	257, 592, 595, 620, 623, 1345, 2279
BseXI	GCAGC	4 cut(s)	110, 508, 1168, 2376
Bsh1236I	CGCG	2 cut(s)	255, 1922
Bsh1285I	CGRYCG	1 cut(s)	160
BshFI	GGCC	6 cut(s)	5, 243, 264, 642, 732, 2163
BshNI	GGYRCC	3 cut(s)	216, 1798, 1829
BshVI	ATCGAT	1 cut(s)	1992
BsiEI	CGRYCG	1 cut(s)	160
BsiHKAI	GWGCWC	3 cut(s)	32, 93, 1004
BsiSI	CCGG	2 cut(s)	183, 214
BslFI	GGGAC	6 cut(s)	131, 172, 1232, 1842, 1929, 2283
BslI	CCNNNNNNNGG	6 cut(s)	213, 226, 565, 714, 2062, 2182
BsmAI	GTCTC	3 cut(s)	593, 1386, 2133
BsmBI	CGTCTC	1 cut(s)	2133
BsmFI	GGGAC	6 cut(s)	131, 172, 1232, 1842, 1929, 2283
BsmI	GAATGC	1 cut(s)	1849
BsnI	GGCC	6 cut(s)	5, 243, 264, 642, 732, 2163
Bsp119I	TTCGAA	1 cut(s)	1318
Bsp1286I	GDGCHC	4 cut(s)	32, 93, 357, 1004
Bsp1407I	TGTACA	2 cut(s)	1864, 2434
Bsp143I	GATC	8 cut(s)	161, 325, 337, 1510, 1603, 1993, 2185, 2194
Bsp19I	CCATGG	1 cut(s)	9
BspANI	GGCC	6 cut(s)	5, 243, 264, 642, 732, 2163
BspCNI	CTCAG	5 cut(s)	13, 94, 567, 595, 1036
BspDI	ATCGAT	1 cut(s)	1992
BspFNI	CGCG	2 cut(s)	255, 1922
BspHI	TCATGA	1 cut(s)	624
BspMAI	CTGCAG	1 cut(s)	526
BspPI	GGATC	6 cut(s)	156, 320, 333, 1505, 2193, 2202
BspT104I	TTCGAA	1 cut(s)	1318
BspT107I	GGYRCC	3 cut(s)	216, 1798, 1829
BsrBI	CCGCTC	1 cut(s)	2169
BsrDI	GCAATG	1 cut(s)	2096
BsrGI	TGTACA	2 cut(s)	1864, 2434
BssECI	CCNNGG	3 cut(s)	9, 321, 2022
BssHII	GCGCGC	1 cut(s)	1920
BssMI	GATC	8 cut(s)	161, 325, 337, 1510, 1603, 1993, 2185, 2194
BssNI	GRCGYC	3 cut(s)	217, 380, 1285
BssSI	CACGAG	1 cut(s)	2414
BssT1I	CCWWGG	2 cut(s)	9, 2022
Bst2BI	CACGAG	1 cut(s)	2414
Bst2UI	CCWGG	3 cut(s)	140, 323, 1598
Bst4CI	ACNGT	3 cut(s)	1020, 1213, 1223
Bst6I	CTCTTC	5 cut(s)	425, 659, 1335, 1368, 1743
BstACI	GRCGYC	3 cut(s)	217, 380, 1285
BstAUI	TGTACA	2 cut(s)	1864, 2434
BstBI	TTCGAA	1 cut(s)	1318
BstC8I	GCNNGC	8 cut(s)	28, 262, 357, 497, 1350, 1922, 1926, 2362
BstDEI	CTNAG	6 cut(s)	21, 43, 81, 575, 603, 1044
BstDSI	CCRYGG	1 cut(s)	9
BstEII	GGTNACC	2 cut(s)	1726, 2171
BstF5I	GGATG	7 cut(s)	235, 574, 703, 1243, 1429, 1936, 2114
BstFNI	CGCG	2 cut(s)	255, 1922
BstH2I	RGCGCY	4 cut(s)	17, 183, 220, 522
BstHHI	GCGC	7 cut(s)	16, 182, 219, 255, 521, 1922, 1924
BstKTI	GATC	8 cut(s)	164, 328, 340, 1513, 1606, 1996, 2188, 2197
BstMAI	GTCTC	3 cut(s)	593, 1386, 2133
BstMBI	GATC	8 cut(s)	161, 325, 337, 1510, 1603, 1993, 2185, 2194
BstMCI	CGRYCG	1 cut(s)	160
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 216, 261, 296, 738, 1260, 1685, 1742, 2098
BstNI	CCWGG	3 cut(s)	140, 323, 1598
BstNSI	RCATGY	3 cut(s)	499, 1304, 1871
BstPI	GGTNACC	2 cut(s)	1726, 2171
BstSCI	CCNGG	4 cut(s)	138, 182, 321, 1596
BstSFI	CTRYAG	1 cut(s)	522
BstUI	CGCG	2 cut(s)	255, 1922
BstV1I	GCAGC	4 cut(s)	110, 508, 1168, 2376
BstV2I	GAAGAC	4 cut(s)	1017, 1635, 1769, 2099
BstX2I	RGATCY	5 cut(s)	325, 1510, 1603, 2185, 2194
BstYI	RGATCY	5 cut(s)	325, 1510, 1603, 2185, 2194
Bsu15I	ATCGAT	1 cut(s)	1992
Bsu36I	CCTNAGG	2 cut(s)	21, 43
BsuRI	GGCC	6 cut(s)	5, 243, 264, 642, 732, 2163
BsuTUI	ATCGAT	1 cut(s)	1992
BtgI	CCRYGG	1 cut(s)	9
BtgZI	GCGATG	1 cut(s)	280
BtrI	CACGTC	1 cut(s)	752
BtsCI	GGATG	7 cut(s)	235, 574, 703, 1243, 1429, 1936, 2114
BtsI	GCAGTG	2 cut(s)	1467, 1731
BtsIMutI	CAGTG	7 cut(s)	129, 484, 650, 684, 1467, 1731, 2472
BveI	ACCTGC	1 cut(s)	1691
Cac8I	GCNNGC	8 cut(s)	28, 262, 357, 497, 1350, 1922, 1926, 2362
CaiI	CAGNNNCTG	1 cut(s)	1597
CciI	TCATGA	1 cut(s)	624
CfoI	GCGC	7 cut(s)	16, 182, 219, 255, 521, 1922, 1924
Cfr13I	GGNCC	8 cut(s)	145, 186, 241, 262, 474, 1475, 1594, 2270
ClaI	ATCGAT	1 cut(s)	1992
CseI	GACGC	3 cut(s)	222, 369, 1274
CsiI	ACCWGGT	1 cut(s)	138
Csp6I	GTAC	5 cut(s)	488, 789, 1500, 1865, 2435
CviQI	GTAC	5 cut(s)	488, 789, 1500, 1865, 2435
DdeI	CTNAG	6 cut(s)	21, 43, 81, 575, 603, 1044
DinI	GGCGCC	1 cut(s)	218
DpnI	GATC	8 cut(s)	163, 327, 339, 1512, 1605, 1995, 2187, 2196
DpnII	GATC	8 cut(s)	161, 325, 337, 1510, 1603, 1993, 2185, 2194
DrdI	GACNNNNNNGTC	2 cut(s)	143, 379
DriI	GACNNNNNGTC	1 cut(s)	591
DseDI	GACNNNNNNGTC	2 cut(s)	143, 379
EaeI	YGGCCR	3 cut(s)	3, 640, 2161
Eam1104I	CTCTTC	5 cut(s)	425, 659, 1335, 1368, 1743
Eam1105I	GACNNNNNGTC	1 cut(s)	591
EarI	CTCTTC	5 cut(s)	425, 659, 1335, 1368, 1743
Ecl136II	GAGCTC	2 cut(s)	91, 1002
Eco130I	CCWWGG	2 cut(s)	9, 2022
Eco24I	GRGCYC	3 cut(s)	93, 357, 1004
Eco47I	GGWCC	6 cut(s)	145, 186, 474, 1475, 1594, 2270
Eco53kI	GAGCTC	2 cut(s)	91, 1002
Eco57I	CTGAAG	3 cut(s)	1104, 1767, 2243
Eco81I	CCTNAGG	2 cut(s)	21, 43
Eco91I	GGTNACC	2 cut(s)	1726, 2171
EcoICRI	GAGCTC	2 cut(s)	91, 1002
EcoO109I	RGGNCCY	2 cut(s)	186, 1594
EcoO65I	GGTNACC	2 cut(s)	1726, 2171
EcoRI	GAATTC	3 cut(s)	547, 689, 1714
EcoRII	CCWGG	3 cut(s)	138, 321, 1596
EcoT14I	CCWWGG	2 cut(s)	9, 2022
EcoT38I	GRGCYC	3 cut(s)	93, 357, 1004
EgeI	GGCGCC	1 cut(s)	218
EheI	GGCGCC	1 cut(s)	218
ErhI	CCWWGG	2 cut(s)	9, 2022
Esp3I	CGTCTC	1 cut(s)	2133
FaqI	GGGAC	6 cut(s)	131, 172, 1232, 1842, 1929, 2283
FauI	CCCGC	5 cut(s)	197, 215, 253, 364, 1549
FblI	GTMKAC	1 cut(s)	236
Fnu4HI	GCNGC	8 cut(s)	124, 127, 193, 251, 522, 774, 1157, 2365
FokI	GGATG	7 cut(s)	242, 581, 710, 1250, 1436, 1923, 2101
FriOI	GRGCYC	3 cut(s)	93, 357, 1004
Fsp4HI	GCNGC	8 cut(s)	124, 127, 193, 251, 522, 774, 1157, 2365
FspBI	CTAG	3 cut(s)	1559, 2189, 2261
GlaI	GCGC	7 cut(s)	15, 181, 218, 254, 520, 1921, 1923
GluI	GCNGC	8 cut(s)	124, 127, 193, 251, 522, 774, 1157, 2365
GsuI	CTGGAG	2 cut(s)	617, 988
HaeII	RGCGCY	4 cut(s)	17, 183, 220, 522
HaeIII	GGCC	6 cut(s)	5, 243, 264, 642, 732, 2163
HapII	CCGG	2 cut(s)	183, 214
HgaI	GACGC	3 cut(s)	222, 369, 1274
HhaI	GCGC	7 cut(s)	16, 182, 219, 255, 521, 1922, 1924
Hin1I	GRCGYC	3 cut(s)	217, 380, 1285
Hin6I	GCGC	7 cut(s)	14, 180, 217, 253, 519, 1920, 1922
HinP1I	GCGC	7 cut(s)	14, 180, 217, 253, 519, 1920, 1922
HincII	GTYRAC	2 cut(s)	237, 529
HindII	GTYRAC	2 cut(s)	237, 529
HinfI	GANTC	8 cut(s)	875, 1145, 1308, 1343, 1379, 1574, 2249, 2444
HpaII	CCGG	2 cut(s)	183, 214
HphI	GGTGA	5 cut(s)	926, 935, 1166, 1723, 2183
Hpy166II	GTNNAC	3 cut(s)	237, 508, 529
Hpy188III	TCNNGA	6 cut(s)	596, 625, 935, 1277, 1559, 2189
Hpy8I	GTNNAC	3 cut(s)	237, 508, 529
Hpy99I	CGWCG	9 cut(s)	238, 241, 367, 370, 373, 376, 713, 753, 1290
HpyAV	CCTTC	6 cut(s)	394, 889, 981, 1135, 1388, 2128
HpyCH4III	ACNGT	3 cut(s)	1020, 1213, 1223
HpyCH4IV	ACGT	3 cut(s)	587, 751, 2491
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 216, 261, 296, 738, 1260, 1685, 1742, 2098
HpyF3I	CTNAG	6 cut(s)	21, 43, 81, 575, 603, 1044
HpySE526I	ACGT	3 cut(s)	587, 751, 2491
Hsp92I	GRCGYC	3 cut(s)	217, 380, 1285
HspAI	GCGC	7 cut(s)	14, 180, 217, 253, 519, 1920, 1922
KasI	GGCGCC	1 cut(s)	216
KflI	GGGWCCC	1 cut(s)	186
Kzo9I	GATC	8 cut(s)	161, 325, 337, 1510, 1603, 1993, 2185, 2194
LmnI	GCTCC	6 cut(s)	88, 96, 352, 651, 1007, 1357
Lsp1109I	GCAGC	4 cut(s)	110, 508, 1168, 2376
LweI	GCATC	9 cut(s)	220, 688, 1168, 1414, 1675, 1945, 1998, 2289, 2337
MabI	ACCWGGT	1 cut(s)	138
MaeI	CTAG	3 cut(s)	1559, 2189, 2261
MaeII	ACGT	3 cut(s)	587, 751, 2491
MaeIII	GTNAC	4 cut(s)	1112, 1726, 2069, 2171
MalI	GATC	8 cut(s)	163, 327, 339, 1512, 1605, 1995, 2187, 2196
MbiI	CCGCTC	1 cut(s)	2169
MboI	GATC	8 cut(s)	161, 325, 337, 1510, 1603, 1993, 2185, 2194
MfeI	CAATTG	1 cut(s)	2274
MflI	RGATCY	5 cut(s)	325, 1510, 1603, 2185, 2194
MhlI	GDGCHC	4 cut(s)	32, 93, 357, 1004
MlsI	TGGCCA	3 cut(s)	5, 642, 2163
MluNI	TGGCCA	3 cut(s)	5, 642, 2163
Mly113I	GGCGCC	1 cut(s)	217
MlyI	GAGTC	3 cut(s)	884, 1352, 1388
MmeI	TCCRAC	6 cut(s)	66, 207, 385, 695, 1379, 1409
Mox20I	TGGCCA	3 cut(s)	5, 642, 2163
MscI	TGGCCA	3 cut(s)	5, 642, 2163
MseI	TTAA	5 cut(s)	53, 891, 1233, 1490, 1623
MslI	CAYNNNNRTG	2 cut(s)	1866, 2078
Msp20I	TGGCCA	3 cut(s)	5, 642, 2163
MspA1I	CMGCKG	1 cut(s)	123
MspI	CCGG	2 cut(s)	183, 214
MspR9I	CCNGG	4 cut(s)	140, 184, 323, 1598
MunI	CAATTG	1 cut(s)	2274
Mva1269I	GAATGC	1 cut(s)	1849
MvaI	CCWGG	3 cut(s)	140, 323, 1598
MvnI	CGCG	2 cut(s)	255, 1922
MwoI	GCNNNNNNNGC	9 cut(s)	11, 216, 261, 296, 738, 1260, 1685, 1742, 2098
NarI	GGCGCC	1 cut(s)	217
NciI	CCSGG	1 cut(s)	184
NcoI	CCATGG	1 cut(s)	9
NdeII	GATC	8 cut(s)	161, 325, 337, 1510, 1603, 1993, 2185, 2194
NmeAIII	GCCGAG	2 cut(s)	708, 1162
NmuCI	GTSAC	3 cut(s)	1112, 2069, 2171
NspI	RCATGY	3 cut(s)	499, 1304, 1871
NspV	TTCGAA	1 cut(s)	1318
PaeI	GCATGC	1 cut(s)	499
PagI	TCATGA	1 cut(s)	624
PauI	GCGCGC	1 cut(s)	1920
PcsI	WCGNNNNNNNCGW	7 cut(s)	233, 342, 368, 371, 377, 745, 2421
PctI	GAATGC	1 cut(s)	1849
PfeI	GAWTC	5 cut(s)	1145, 1308, 1574, 2249, 2444
PflMI	CCANNNNNTGG	1 cut(s)	2182
PkrI	GCNGC	8 cut(s)	125, 128, 194, 252, 523, 775, 1158, 2366
PleI	GAGTC	3 cut(s)	883, 1351, 1387
PluTI	GGCGCC	1 cut(s)	220
PpsI	GAGTC	3 cut(s)	883, 1351, 1387
PpuMI	RGGWCCY	2 cut(s)	186, 1594
PshBI	ATTAAT	1 cut(s)	1623
Psp124BI	GAGCTC	2 cut(s)	93, 1004
Psp5II	RGGWCCY	2 cut(s)	186, 1594
Psp6I	CCWGG	3 cut(s)	138, 321, 1596
PspEI	GGTNACC	2 cut(s)	1726, 2171
PspGI	CCWGG	3 cut(s)	138, 321, 1596
PspPI	GGNCC	8 cut(s)	145, 186, 241, 262, 474, 1475, 1594, 2270
PspPPI	RGGWCCY	2 cut(s)	186, 1594
PstI	CTGCAG	1 cut(s)	526
PstNI	CAGNNNCTG	1 cut(s)	1597
PsuI	RGATCY	5 cut(s)	325, 1510, 1603, 2185, 2194
PteI	GCGCGC	1 cut(s)	1920
RsaI	GTAC	5 cut(s)	489, 790, 1501, 1866, 2436
RsaNI	GTAC	5 cut(s)	488, 789, 1500, 1865, 2435
RseI	CAYNNNNRTG	2 cut(s)	1866, 2078
SacI	GAGCTC	2 cut(s)	93, 1004
SalI	GTCGAC	1 cut(s)	235
SaqAI	TTAA	5 cut(s)	53, 891, 1233, 1490, 1623
SatI	GCNGC	8 cut(s)	124, 127, 193, 251, 522, 774, 1157, 2365
Sau3AI	GATC	8 cut(s)	161, 325, 337, 1510, 1603, 1993, 2185, 2194
Sau96I	GGNCC	8 cut(s)	145, 186, 241, 262, 474, 1475, 1594, 2270
SchI	GAGTC	3 cut(s)	884, 1352, 1388
ScrFI	CCNGG	4 cut(s)	140, 184, 323, 1598
SduI	GDGCHC	4 cut(s)	32, 93, 357, 1004
SexAI	ACCWGGT	1 cut(s)	138
SfaNI	GCATC	9 cut(s)	220, 688, 1168, 1414, 1675, 1945, 1998, 2289, 2337
SfcI	CTRYAG	1 cut(s)	522
SfoI	GGCGCC	1 cut(s)	218
SfuI	TTCGAA	1 cut(s)	1318
SgrDI	CGTCGACG	1 cut(s)	235
SinI	GGWCC	6 cut(s)	145, 186, 474, 1475, 1594, 2270
SmiMI	CAYNNNNRTG	2 cut(s)	1866, 2078
SmlI	CTYRAG	1 cut(s)	305
SmoI	CTYRAG	1 cut(s)	305
SphI	GCATGC	1 cut(s)	499
SspDI	GGCGCC	1 cut(s)	216
SspI	AATATT	1 cut(s)	1525
SspMI	CTAG	3 cut(s)	1559, 2189, 2261
SstI	GAGCTC	2 cut(s)	93, 1004
StyD4I	CCNGG	4 cut(s)	138, 182, 321, 1596
StyI	CCWWGG	2 cut(s)	9, 2022
TaaI	ACNGT	3 cut(s)	1020, 1213, 1223
TaiI	ACGT	3 cut(s)	590, 754, 2494
TaqII	GACCGA	1 cut(s)	174
TatI	WGTACW	2 cut(s)	1864, 2434
TauI	GCSGC	4 cut(s)	129, 195, 253, 776
TfiI	GAWTC	5 cut(s)	1145, 1308, 1574, 2249, 2444
Tru1I	TTAA	5 cut(s)	53, 891, 1233, 1490, 1623
Tru9I	TTAA	5 cut(s)	53, 891, 1233, 1490, 1623
TscAI	CASTG	7 cut(s)	136, 484, 650, 691, 1474, 1738, 2472
TseFI	GTSAC	3 cut(s)	1112, 2069, 2171
TseI	GCWGC	4 cut(s)	123, 521, 1156, 2364
Tsp45I	GTSAC	3 cut(s)	1112, 2069, 2171
TspDTI	ATGAA	8 cut(s)	47, 613, 1137, 1580, 1641, 1827, 2064, 2223
TspRI	CASTG	7 cut(s)	136, 484, 650, 691, 1474, 1738, 2472
Van91I	CCANNNNNTGG	1 cut(s)	2182
VpaK11BI	GGWCC	6 cut(s)	145, 186, 474, 1475, 1594, 2270
VspI	ATTAAT	1 cut(s)	1623
XapI	RAATTY	5 cut(s)	332, 547, 689, 1714, 2481
XbaI	TCTAGA	2 cut(s)	1558, 2188
XceI	RCATGY	3 cut(s)	499, 1304, 1871
XmiI	GTMKAC	1 cut(s)	236
XspI	CTAG	3 cut(s)	1559, 2189, 2261

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.