Rorug06G0062300

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0006195
Physical Location & Seq
Forward (+)
8293862 .. 8303741
9880 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0062300.1

Sequence Viewer

Length: 2766 bp
ATGAGCACACAAATACCCTCTACATCTCTTATCCGTTCAACTCCACCATGGAAATATGATGTCTTTCTGAGTTTTAGAGGAGATGACACTCGGAAGGCTTTCACAGACCACTTATACGCTGCATTGGAACATCAAGGAATAATAACTTTCAGGGATGATCCTGAACTTCAAAAAGGGAAAGCTATATCTCCAGAACTTTCTGCGGCAATTGAAGAATCAAGATTTGCACTCATTGTCCTCTCACAAAATTATGCTTCATCGACGTGGTGCCTAGATGAACTTCTAAAAATTCTTGAATGCATGAAAGCAAGAGAAACAGTGCTGCCAATTTTCTATGATGTTCATCCCTCTGATGTAAGAAAGCAAACGGGGAGTTTCAGTGAAGCGTTCAGTAAACATGAAGAAAGGTTTATGGATGACAATGGGAAAGTGCGAAAGTGGAAATCTGCTTTAACTGAAGTGGCAAGTTTTTCTGGCTGGATTTTGAAGGAATGGTATGAAGCAAAGCTCATCAGAAATATTGTTGAAGTGATATGGACGAAATTGCGCCCTACATCATTTACCTTTGTGGAGAATCTAGTTGGAATAAATTCAAGATTGCAGCCAATAAATGTGCTTTTAGGTGCAGGGGTGGAGGACATTCGCTTTATTGGATTATGGGGGATGGGTGGAATTGGTAAGACAACAATTTCCAGAGTTGTTTATGAGAGAATCTCTTGTGAATTTGAATTTAGTTTCCTTCTCACCAATATTAGAAATGCCGCTGAGAAATATGGTATACTTCATCTACAAAAGCAACTTCTTTCTGGGATATGGATGAAAAAGGATGACATCTTAGACCTACATCAAGGAACCACCATAATAAAGAGATTGTTAGGTAACAGAAAGGTTCTTCTCATTCTTGATGACGTGAACCATTCAAGCCATTTACAATATTTGGCTGGAAACCGCAAGTGGTTTGGTTTAGGAAGTAGAGTTCTAATCACAACTAGAAATGAGCATTTGTTAATCGAACATGGAGTAAAGAGAAGATTAAAGGTTGAGGAATTAAATAATGAGGATTCTCTTCAACTTTTCTGCTGGAAAGCGTTTAAGAAACATAACCCTAAAAAAGATTTTCTTGGTGTGTCTGATTTTGTTGTGAATTATGCGAAGGGTCTCCCTTTAGCTCTTGAAGTCTTAGGTTCTTTTTTGCATGGAAGGGATCTAAGTGAATGGAACAGTGCACTGAGCAAACTAGGAAGAGTTTGTAATGTGGAAATTTTTGACATACTTAAAATAAGTTATGATGGTCTAGATGATGAGGAGAAGAAAATATTCCTAGACATTGCATGTTACTTTTGTGGAGAGGAGAAAGATCGAGTAACAAAAGTACTAACCAGTTTCGACGTTTCTGCAACCATTGGAATAACTGTCCTGGCAGAGAGATCTCTTCTGACTATTTCGTGTGGAAGATTATGGATGCATGATTTGCTCCAAGAAATGGGGCGGGAAATTGTCCGTCGGGAATCTTCTGATGAGCCAGGCAGGCGCAGTAGGTTGTGGCTTCTTGAAGACATCAAACATGTCTTAACCAAAAATACAGGAACAGAATCAATAGAAAGCATTGTTCTGGACTCAACTAAGCAAGGAGTAAACGTGGACGTGAATGCTAGATCCTTTTTAATGATGAACAAATTGAGATACCTCGTGATTAAGAATGTGAAGCTATCTAATGGCCTTGAATATCTTCCCGATAGTCTTCGGATTCTTGAATGGACCGGGTATCCGTCAAAATCTCTCCCATCGCATTTCAACCCTGAGAAGCTACTAGAACTTAATATGTGCCATAGTTGCATTAGAAATTTTCCCCTGGGAATAGAGCCTTTATACAATTTAAAAACCATTAAACTCAGTGGATCTCTGAATCTTGTCTGCACCCCAAACTTCAAAGCTATGCCATATCTTGAGCTTCTGTTTCTGGAAGGTTGTACACAACTGTATAGGGTTGACTCATCAATTGAAGTGCTTGAAAGACTTGCTCTGCTGAACTTGAAGGATTGCAAGAATCTTGTGCATTTTGCTAGTGTGCATGGCTTAAAATCTCTCAAAGTTTTCAATCTTTCTGGGTGCTCAAAACTTAACAAACTACCAAATAACATGGATCACTTAGAGAGTTTGGAGGAGCTTTATGTCAATGGCACTGGCATAAGAGAACTACCTTCCTCTATTGGAAAGATTGATAGACTTCAGCTGCTGAACTTGAAAGATTGCAGAGATCTCATGTTTCTTCCAAGCAGTGTGTGTGACTTAAAATCTCTCAAAGCTGTTAATTTTTCTGGTTGCTCAAAGCTTGAAAAATTGCCGGATGAGTTGGGTCATGTAGAATGTTTAGAGAAGCTTGATGTGAGTGGAACTGGCCTAAGAGAACTGCCCTCCTCAATTGCTCTTTTGAAAAATCTCAAAGAATTATCTCTTGCTGGATGTAAAGGACAATCATCTAAATCCTGGAATATCATCTTCCACCCTCTTCAGTTATTTCTAAGAAGTCACATTCCAGCAGGAATGTCGCTGCCTTGTTTATCTGGTTTGCATTCGTTAACCAAACTTAATCTAAGTGACTGCAATCTTTCTGAAGGAGAGATCCCCGGTGATCTTGGATGCTTGTCTTTATTAACGAAATTAAATCTCAGCAGAAATCAGTTCGTTAAACTACCCTTGAGCATCTGCCAACTCTCTAGACTTGAATATCTTAACTTGGAGTACTGCCAAAAACTTCAGACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MBD

Protein Analysis

921

Amino Acids

104.38

Weight (kDa)

8.25

Isoelectric Point (pI)

42.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 18 - 186 2.3e-53 TIR domain
TIR_2 PF13676 21 - 118 1.2e-15 TIR domain
NB-ARC PF00931 212 - 367 6e-20 NB-ARC domain
WHD_ROQ1 PF23282 434 - 504 9.9e-18 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 670 - 770 2e-11 Leucine-rich repeat region
LRR_13 PF23286 693 - 779 1.3e-10 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 761 - 820 8.5e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 267
AccB7I CCANNNNNTGG 1 cut(s) 1483
AccI GTMKAC 1 cut(s) 778
AciI CCGC 4 cut(s) 203, 762, 949, 1489
AclWI GGATC 6 cut(s) 152, 1212, 1650, 1906, 2151, 2617
AcsI RAATTY 6 cut(s) 288, 589, 722, 728, 1260, 1843
AcuI CTGAAG 5 cut(s) 477, 2213, 2495, 2634, 2741
AfaI GTAC 3 cut(s) 1374, 1972, 2744
AfiI CCNNNNNNNGG 1 cut(s) 1483
AflIII ACRYGT 1 cut(s) 1564
AjiI CACGTC 3 cut(s) 264, 910, 1645
AjnI CCWGG 4 cut(s) 1416, 1522, 1851, 2486
AloI GAACNNNNNNTCC 2 cut(s) 960, 992
Alw21I GWGCWC 3 cut(s) 8, 1228, 2114
Alw26I GTCTC 1 cut(s) 1163
Alw44I GTGCAC 1 cut(s) 1224
AlwI GGATC 6 cut(s) 152, 1212, 1650, 1906, 2151, 2617
AlwNI CAGNNNCTG 1 cut(s) 2236
AoxI GGCC 2 cut(s) 1717, 2398
ApaLI GTGCAC 1 cut(s) 1224
ApeKI GCWGC 5 cut(s) 119, 322, 601, 2233, 2551
ApoI RAATTY 6 cut(s) 288, 589, 722, 728, 1260, 1843
Asp700I GAANNNNTTC 4 cut(s) 98, 589, 1316, 1728
AspLEI GCGC 2 cut(s) 549, 1533
AspS9I GGNCC 1 cut(s) 1758
AsuC2I CCSGG 2 cut(s) 1762, 2628
AsuHPI GGTGA 2 cut(s) 736, 2642
AvaII GGWCC 1 cut(s) 1758
BaeGI GKGCMC 1 cut(s) 1228
BanI GGYRCC 1 cut(s) 267
BauI CACGAG 1 cut(s) 1688
BbsI GAAGAC 2 cut(s) 1560, 1733
Bbv12I GWGCWC 3 cut(s) 8, 1228, 2114
BbvI GCAGC 5 cut(s) 106, 309, 613, 2220, 2538
BccI CCATC 3 cut(s) 658, 1283, 1792
BcgI CGANNNNNNTGC 4 cut(s) 1376, 1410, 2529, 2563
BciT130I CCWGG 4 cut(s) 1418, 1524, 1853, 2488
BciVI GTATCC 1 cut(s) 1776
BcnI CCSGG 2 cut(s) 1762, 2628
BcoDI GTCTC 1 cut(s) 1163
BfuI GTATCC 1 cut(s) 1776
BglI GCCNNNNNGGC 1 cut(s) 1528
BglII AGATCT 2 cut(s) 1427, 2257
BisI GCNGC 7 cut(s) 120, 204, 323, 602, 762, 2234, 2552
BlsI GCNGC 7 cut(s) 121, 205, 324, 603, 763, 2235, 2553
BmcAI AGTACT 2 cut(s) 1374, 2744
Bme1390I CCNGG 6 cut(s) 1418, 1524, 1762, 1853, 2488, 2628
Bme18I GGWCC 1 cut(s) 1758
BmgBI CACGTC 3 cut(s) 264, 910, 1645
BmgT120I GGNCC 1 cut(s) 1758
BmiI GGNNCC 2 cut(s) 269, 853
BmrFI CCNGG 6 cut(s) 1418, 1524, 1762, 1853, 2488, 2628
BmsI GCATC 3 cut(s) 1452, 2630, 2712
BpiI GAAGAC 2 cut(s) 1560, 1733
BplI GAGNNNNNCTC 2 cut(s) 698, 730
BpmI CTGGAG 1 cut(s) 174
BpuEI CTTGAG 2 cut(s) 1967, 2719
BpuMI CCSGG 2 cut(s) 1762, 2628
BsaBI GATNNNNATC 1 cut(s) 342
BsaI GGTCTC 1 cut(s) 1163
BsaJI CCNNGG 4 cut(s) 47, 1851, 1852, 2626
BsaXI ACNNNNNCTCC 4 cut(s) 364, 394, 1623, 1653
Bsc4I CCNNNNNNNGG 1 cut(s) 1483
Bse1I ACTGG 3 cut(s) 1380, 2188, 2401
Bse3DI GCAATG 1 cut(s) 1326
Bse8I GATNNNNATC 1 cut(s) 342
BseBI CCWGG 4 cut(s) 1418, 1524, 1853, 2488
BseDI CCNNGG 4 cut(s) 47, 1851, 1852, 2626
BseJI GATNNNNATC 1 cut(s) 342
BseLI CCNNNNNNNGG 1 cut(s) 1483
BseMI GCAATG 1 cut(s) 1326
BseMII CTCAG 6 cut(s) 59, 756, 1220, 1791, 1906, 2683
BseNI ACTGG 3 cut(s) 1380, 2188, 2401
BseRI GAGGAG 5 cut(s) 93, 1319, 1364, 2177, 2407
BseSI GKGCMC 1 cut(s) 1228
BseXI GCAGC 5 cut(s) 106, 309, 613, 2220, 2538
BsgI GTGCAG 2 cut(s) 645, 1900
BshFI GGCC 2 cut(s) 1719, 2400
BshNI GGYRCC 1 cut(s) 267
BsiHKAI GWGCWC 3 cut(s) 8, 1228, 2114
BsiSI CCGG 3 cut(s) 1761, 2345, 2628
BslI CCNNNNNNNGG 1 cut(s) 1483
BsmAI GTCTC 1 cut(s) 1163
BsmI GAATGC 3 cut(s) 302, 1654, 2572
BsnI GGCC 2 cut(s) 1719, 2400
Bso31I GGTCTC 1 cut(s) 1163
Bsp1286I GDGCHC 3 cut(s) 8, 1228, 2114
Bsp1407I TGTACA 1 cut(s) 1970
Bsp19I CCATGG 1 cut(s) 47
BspACI CCGC 4 cut(s) 203, 762, 949, 1489
BspANI GGCC 2 cut(s) 1719, 2400
BspCNI CTCAG 6 cut(s) 60, 757, 1221, 1792, 1905, 2682
BspLI GGNNCC 2 cut(s) 269, 853
BspPI GGATC 6 cut(s) 152, 1212, 1650, 1906, 2151, 2617
BspT107I GGYRCC 1 cut(s) 267
BspTNI GGTCTC 1 cut(s) 1163
BsrDI GCAATG 1 cut(s) 1326
BsrGI TGTACA 1 cut(s) 1970
BsrI ACTGG 3 cut(s) 1380, 2188, 2401
BssECI CCNNGG 4 cut(s) 47, 1851, 1852, 2626
BssNAI GTATAC 1 cut(s) 779
BssSI CACGAG 1 cut(s) 1688
BssT1I CCWWGG 1 cut(s) 47
Bst1107I GTATAC 1 cut(s) 779
Bst2BI CACGAG 1 cut(s) 1688
Bst2UI CCWGG 4 cut(s) 1418, 1524, 1853, 2488
Bst4CI ACNGT 4 cut(s) 319, 1223, 1414, 1980
Bst6I CTCTTC 4 cut(s) 1071, 1237, 1437, 2514
BstAPI GCANNNNNTGC 1 cut(s) 1471
BstAUI TGTACA 1 cut(s) 1970
BstC8I GCNNGC 1 cut(s) 1529
BstDSI CCRYGG 1 cut(s) 47
BstHHI GCGC 2 cut(s) 549, 1533
BstMAI GTCTC 1 cut(s) 1163
BstMWI GCNNNNNNNGC 3 cut(s) 1471, 1528, 1833
BstNI CCWGG 4 cut(s) 1418, 1524, 1853, 2488
BstNSI RCATGY 2 cut(s) 1335, 1568
BstSCI CCNGG 6 cut(s) 1416, 1522, 1760, 1851, 2486, 2626
BstSLI GKGCMC 1 cut(s) 1228
BstV1I GCAGC 5 cut(s) 106, 309, 613, 2220, 2538
BstV2I GAAGAC 2 cut(s) 1560, 1733
BstX2I RGATCY 6 cut(s) 1204, 1427, 1655, 1898, 2257, 2622
BstYI RGATCY 6 cut(s) 1204, 1427, 1655, 1898, 2257, 2622
BstZ17I GTATAC 1 cut(s) 779
BsuI GTATCC 1 cut(s) 1776
BsuRI GGCC 2 cut(s) 1719, 2400
BtgI CCRYGG 1 cut(s) 47
BtgZI GCGATG 1 cut(s) 1770
BtrI CACGTC 3 cut(s) 264, 910, 1645
BtsI GCAGTG 1 cut(s) 2284
BtsIMutI CAGTG 7 cut(s) 324, 385, 1226, 1228, 1900, 2181, 2284
Cac8I GCNNGC 1 cut(s) 1529
CaiI CAGNNNCTG 1 cut(s) 2236
CfoI GCGC 2 cut(s) 549, 1533
Cfr13I GGNCC 1 cut(s) 1758
Csp6I GTAC 3 cut(s) 1373, 1971, 2743
CviQI GTAC 3 cut(s) 1373, 1971, 2743
DraI TTTAAA 1 cut(s) 1878
Eam1104I CTCTTC 4 cut(s) 1071, 1237, 1437, 2514
EarI CTCTTC 4 cut(s) 1071, 1237, 1437, 2514
Eco130I CCWWGG 1 cut(s) 47
Eco31I GGTCTC 1 cut(s) 1163
Eco47I GGWCC 1 cut(s) 1758
Eco57I CTGAAG 5 cut(s) 477, 2213, 2495, 2634, 2741
EcoRII CCWGG 4 cut(s) 1416, 1522, 1851, 2486
EcoT14I CCWWGG 1 cut(s) 47
EcoT22I ATGCAT 2 cut(s) 302, 1467
ErhI CCWWGG 1 cut(s) 47
FalI AAGNNNNNCTT 2 cut(s) 1104, 1136
FauI CCCGC 1 cut(s) 1482
FblI GTMKAC 1 cut(s) 778
Fnu4HI GCNGC 7 cut(s) 120, 204, 323, 602, 762, 2234, 2552
Fsp4HI GCNGC 7 cut(s) 120, 204, 323, 602, 762, 2234, 2552
GlaI GCGC 2 cut(s) 548, 1532
GluI GCNGC 7 cut(s) 120, 204, 323, 602, 762, 2234, 2552
GsuI CTGGAG 1 cut(s) 174
HaeIII GGCC 2 cut(s) 1719, 2400
HapII CCGG 3 cut(s) 1761, 2345, 2628
HhaI GCGC 2 cut(s) 549, 1533
Hin6I GCGC 2 cut(s) 547, 1531
HinP1I GCGC 2 cut(s) 547, 1531
HincII GTYRAC 2 cut(s) 1990, 2580
HindII GTYRAC 2 cut(s) 1990, 2580
HindIII AAGCTT 2 cut(s) 2330, 2378
HpaI GTTAAC 1 cut(s) 2580
HpaII CCGG 3 cut(s) 1761, 2345, 2628
HphI GGTGA 2 cut(s) 736, 2642
Hpy166II GTNNAC 9 cut(s) 395, 779, 913, 1226, 1636, 1642, 1973, 1990, 2580
Hpy8I GTNNAC 9 cut(s) 395, 779, 913, 1226, 1636, 1642, 1973, 1990, 2580
Hpy99I CGWCG 3 cut(s) 265, 1391, 1506
HpyAV CCTTC 9 cut(s) 88, 481, 749, 1147, 1194, 1958, 2029, 2211, 2609
HpyCH4III ACNGT 4 cut(s) 319, 1223, 1414, 1980
HpyCH4IV ACGT 5 cut(s) 263, 909, 1389, 1638, 1644
HpyF10VI GCNNNNNNNGC 3 cut(s) 1471, 1528, 1833
HpySE526I ACGT 5 cut(s) 263, 909, 1389, 1638, 1644
HspAI GCGC 2 cut(s) 547, 1531
KspAI GTTAAC 1 cut(s) 2580
LmnI GCTCC 2 cut(s) 1479, 2164
Lsp1109I GCAGC 5 cut(s) 106, 309, 613, 2220, 2538
LweI GCATC 3 cut(s) 1452, 2630, 2712
MaeII ACGT 5 cut(s) 263, 909, 1389, 1638, 1644
MaeIII GTNAC 6 cut(s) 878, 1334, 1363, 2285, 2528, 2597
MfeI CAATTG 3 cut(s) 207, 1998, 2421
MflI RGATCY 6 cut(s) 1204, 1427, 1655, 1898, 2257, 2622
MhlI GDGCHC 3 cut(s) 8, 1228, 2114
MlyI GAGTC 2 cut(s) 1610, 1985
MmeI TCCRAC 1 cut(s) 562
Mph1103I ATGCAT 2 cut(s) 302, 1467
MroXI GAANNNNTTC 4 cut(s) 98, 589, 1316, 1728
MslI CAYNNNNRTG 1 cut(s) 262
MspA1I CMGCKG 2 cut(s) 764, 2233
MspI CCGG 3 cut(s) 1761, 2345, 2628
MspR9I CCNGG 6 cut(s) 1418, 1524, 1762, 1853, 2488, 2628
MunI CAATTG 3 cut(s) 207, 1998, 2421
Mva1269I GAATGC 3 cut(s) 302, 1654, 2572
MvaI CCWGG 4 cut(s) 1418, 1524, 1853, 2488
MwoI GCNNNNNNNGC 3 cut(s) 1471, 1528, 1833
NciI CCSGG 2 cut(s) 1762, 2628
NcoI CCATGG 1 cut(s) 47
NlaIV GGNNCC 2 cut(s) 269, 853
NmuCI GTSAC 3 cut(s) 2285, 2528, 2597
NsiI ATGCAT 2 cut(s) 302, 1467
NspI RCATGY 2 cut(s) 1335, 1568
PasI CCCWGGG 1 cut(s) 1852
PciI ACATGT 1 cut(s) 1564
PctI GAATGC 3 cut(s) 302, 1654, 2572
PdmI GAANNNNTTC 4 cut(s) 98, 589, 1316, 1728
PfeI GAWTC 9 cut(s) 215, 574, 711, 1061, 1508, 1592, 1747, 1906, 2047
PflMI CCANNNNNTGG 1 cut(s) 1483
PfoI TCCNGGA 1 cut(s) 2486
PkrI GCNGC 7 cut(s) 121, 205, 324, 603, 763, 2235, 2553
PleI GAGTC 2 cut(s) 1610, 1985
PpsI GAGTC 2 cut(s) 1610, 1985
PscI ACATGT 1 cut(s) 1564
Psp6I CCWGG 4 cut(s) 1416, 1522, 1851, 2486
PspGI CCWGG 4 cut(s) 1416, 1522, 1851, 2486
PspN4I GGNNCC 2 cut(s) 269, 853
PspPI GGNCC 1 cut(s) 1758
PstNI CAGNNNCTG 1 cut(s) 2236
PsuI RGATCY 6 cut(s) 1204, 1427, 1655, 1898, 2257, 2622
PvuII CAGCTG 1 cut(s) 2233
RsaI GTAC 3 cut(s) 1374, 1972, 2744
RsaNI GTAC 3 cut(s) 1373, 1971, 2743
RseI CAYNNNNRTG 1 cut(s) 262
SatI GCNGC 7 cut(s) 120, 204, 323, 602, 762, 2234, 2552
Sau96I GGNCC 1 cut(s) 1758
ScaI AGTACT 2 cut(s) 1374, 2744
SchI GAGTC 2 cut(s) 1610, 1985
ScrFI CCNGG 6 cut(s) 1418, 1524, 1762, 1853, 2488, 2628
SduI GDGCHC 3 cut(s) 8, 1228, 2114
SfaNI GCATC 3 cut(s) 1452, 2630, 2712
SinI GGWCC 1 cut(s) 1758
SmiMI CAYNNNNRTG 1 cut(s) 262
SmlI CTYRAG 2 cut(s) 1946, 2698
SmoI CTYRAG 2 cut(s) 1946, 2698
SsiI CCGC 4 cut(s) 203, 762, 949, 1489
SspI AATATT 4 cut(s) 520, 751, 935, 1317
StyD4I CCNGG 6 cut(s) 1416, 1522, 1760, 1851, 2486, 2626
StyI CCWWGG 1 cut(s) 47
TaaI ACNGT 4 cut(s) 319, 1223, 1414, 1980
TaiI ACGT 5 cut(s) 266, 912, 1392, 1641, 1647
TaqI TCGA 4 cut(s) 260, 1011, 1360, 1386
TatI WGTACW 3 cut(s) 1372, 1970, 2742
TauI GCSGC 2 cut(s) 206, 764
TfiI GAWTC 9 cut(s) 215, 574, 711, 1061, 1508, 1592, 1747, 1906, 2047
TscAI CASTG 7 cut(s) 324, 385, 1228, 1233, 1900, 2188, 2284
TseFI GTSAC 3 cut(s) 2285, 2528, 2597
TseI GCWGC 5 cut(s) 119, 322, 601, 2233, 2551
Tsp45I GTSAC 3 cut(s) 2285, 2528, 2597
TspDTI ATGAA 9 cut(s) 246, 291, 317, 332, 414, 513, 773, 833, 1685
TspGWI ACGGA 3 cut(s) 23, 1490, 1758
TspRI CASTG 7 cut(s) 324, 385, 1228, 1233, 1900, 2188, 2284
Van91I CCANNNNNTGG 1 cut(s) 1483
VneI GTGCAC 1 cut(s) 1224
VpaK11BI GGWCC 1 cut(s) 1758
XapI RAATTY 6 cut(s) 288, 589, 722, 728, 1260, 1843
XbaI TCTAGA 2 cut(s) 1294, 2717
XceI RCATGY 2 cut(s) 1335, 1568
XmiI GTMKAC 1 cut(s) 778
XmnI GAANNNNTTC 4 cut(s) 98, 589, 1316, 1728
ZrmI AGTACT 2 cut(s) 1374, 2744
Zsp2I ATGCAT 2 cut(s) 302, 1467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.