FvH4_2g17120

Belongs to the glycosyltransferase 2 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
14843524 .. 14847909
4386 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g17120.t1

Sequence Viewer

Length: 3417 bp
ATGGCGTCCTTGAACAGCCAGCCATCTAAGAAGGCAATACGCAGTCCCGGCGGCTCAGCTGGAGGCTCTCAGGGTAAGGCTAATTCAAGTGGCCAAACTGTGAAATTTGCTAGACGAACTTCGAGTGGAAGGTATGTCAGTCTCTCAAGAGAAGACCTTGACATGTCAGGGGAATTGTCAGGGGACTACATGAACTATACGGTCCATATTCCTCCCACCCCGGATAACCAGCCCATGGACACTTCCGTGGCTGTCAAGGCGGAGGAGCAATATGTTTCTAACTCACTCTTCACCGGGGGATTCAACAGCGTTACGCGTGCTCATTTGATGGACAAGGTAATTGATTCGGAGGTGTCACATCCACAGATGGCCGGAGCCAAAGGTTCGGCGTGCATGATGCCTGCTTGTGATGGTAATGTGATGAAGGACGAGAGGGGAGTCGATATAACTCCTTGTGAATGCAGGTTCAAAATATGTAGAGATTGCTATATGGATGCACAGAAGGATACAAATCTTTGTCCTGGTTGCAAGGAGCCATACAGATCGGACGATTTTGATGATGATGGACCAGAATATGATCGTAGGGGAACACTGCAATTGCCTGGACCAGATGGGGGAAATAGGGATAACATGTCAGTGATGAAGAGGAACCAAACAGGTGAATTTGATCACAATAGGTGGTTGTTTGAGACCAAGGGTACCTATGGTGTTGGCAATGCGTTTAATCCCCCAGAGGACAGTGGTTATGATAATGAAGGGTTCGGACCAGGATCAATGGATGCTACCGAAAAGGCTTTCAAGCCGCTAAGTAGGAAGATACCAATTGCAGCAGCCATTATCAGCCCTTACAGGTTACTGATCTTTGTTCGATTGGTAATTCTGGGTTTCTTCTTGCATTGGAGAGTAGTGCATCCAAACAATGACGCAAGATGGTTGTGGATGATGTCAATTGTTTGTGAGCTGTGGTTTGCCTTTTCCTGGATTCTAGATCAAACTCCAAAGTTCTTCCCTATTAATCGTTCTACAGACCTAGAAGTGCTCTTTGAAAAGTTTGATATGCCATCTCCTTCTAATCCCACTGGTCGTTCTGACCTCCCTGGCATTGACATGTTTGTGTCTACTGCCGATCCTGACAAGGAGCCACCTCTCACCACTGCCAACACCATTCTTTCAATCTTGGCTGTTGATTACCCGGTGGAGAAGGTTGCATGCTACATCTCCGATGACGGAGGTGCTCTTCTTACTTTTGAGGCAATGGCAGAGGCTGCTAGTTTTGCAGATTTGTGGGTGCCATTCTGCAGGAAACACAATATTGAACCAAGAAATCCAGATAGTTATTTCGCCCTAAAAGTCGACCCTACGAAGAACAAGAGCAGGACAGACTTTGTGAAGGATAGGAGGAAGATCAAAAGGGAGTTTGATGAGTTCAAGGTAAGGATCAACGGGCTTCCTGACTCTATTAGGAGAAGATCTGATGCCTTCCATGCTAGGGAGGAGATGAAAATGTTAAAGCACATGAGGGAGACGGGTGCCGACCCTTTGGAGCAAGTCAAGGTCCCAAAGGCCACATGGATGGCTGATGGCACACATTGGCCGGGTACTTGGTCCGTCCCTTCTAATGACCATAAAAAAGGTGACCATTCAGGAATTCTACAGGTGATGCTCAAGCCTCCTAGCCCCGATCCGCTAATGGGAGGGCCAGATGACAAGCTTTTAGATTTCACTGATGTTGATATACGACTCCCTATGTTTGTATACATGTCAAGAGAGAAGCGGCAAGGCTACGATCACAACAAGAAAGCTGGTGCTATGAATGCTTTGGTTCGAACTTCAGCTATCTTGTCCAACGGGCCATTCATCCTTAACCTCGACTGTGACCACTACATCTACAACTGCAAAGCCATCCGAGAAGGAATGTGCTTTATGATGGATAGAGGTGGAGAAGACATCTGCTACATTCAGTTTCCTCAGAGATTCGAAGGCATTGATCCCTCGGATCGTTATGCTAACCATAACACTGTGTTTTTCGATGGAAATATGCGTGCTCTCGATGGTCTTCAAGGTCCAATGTACGTCGGAACTGGTACAATGTTTAGGCGGTTCGCCCTTTATGGTTTTGACCCTCCAAATCCAGACAAGGTTGCCGCACAGAAGGCGGCAGCTGCAACTACGGGTGACTCAGCAGAGGCACATGCACAACCCTTGACTCCGGGACAGACCCTACAGCCCATGACAGCTAGTGAGCTCGACCCTGAACTTGATACCAATCTTCTGCCTAAGCGTTTCGGAAATTCTACCATGCTAGCTGAATCCATACCTATTGCTGAGTTTCAAGGCCGCCCCCTAGCTGATCATCCTGCAGTCAAATATGGACGCCCTCCCGGCGTTCTTAGGGTGCCTCGTGATCCACTTGATGCTACAACTGTTGCAGAAGCTGTCTCCGCCATTTCTTGCTGGTACGAGGACAAGACTGAATGGGGAGACCGAGTGGGTTGGATTTATGGATCAGTCACAGAAGATGTTGTGACAGGATACCGTATGCACAACCGTGGATGGCATTCTGTCTATTGCATCACCAAGCGTGATGCATTCCGGGGTTCAGCTCCGATTAATCTTACTGATAGACTCCACCAAGTGCTTCGGTGGGCAACTGGCTCTGTCGAAATTTTCTTCTCCAGAAACAACGCCATACTCGGTTCCATGCGCCTGAAAGTACTGCAGCGTATGTCATACATTAATGTCGGCGTCTACCCTTTCACCTCCATCTTTCTCATTGTCTATTGCTTCCTCCCTGCACTCTCACTCTTCTCTGGACAGTTTATCGTGGCTAATCTTGACATCACCTTCTTAGCCTACTTGCTAACCATGACAATATGCCTCATTGGACTAGCCGTGCTAGAGGTCAAGTGGTCTGGCATAGGATTGGAAGAGTGGTGGAGAAATGAACAGTTCTGGCTCATATCCGGAACCAGCGCTCACTTGGCTGCTGTGGTGCAAGGGATTCTCAAAGTTATTGCAGGAATTGAAATCTCCTTCACACTCACTTCCAAGTCTGCAGCAGATGACAACGATGATATCTTTGCAGACTTGTACCTTGTTAAGTGGACTTCCTTGATGATTCCCCCGATTGTTATCGCACTCGTCAACATAATTGCCATTGCTGTTGCAGTTTCAAGAGAGCTTTATTCTGTAAATGCTCAGTGGGCTAAGCTTGTTGGTGGAGCTTTCTTCAGCTTCTGGGTGTTGGCTCATTTGTATCCTTTTGCGAAGGGTTTGATGGGAAGGAGAGGGAAGACGCCTACCATTGTGTTTGTCTGGGCAGGTCTCATTGCAATCACACTATCGTTGCTCTGGATTGCCATTGCGCCACCGGGTGGTGGTGGACAAGCGGCTGGACAAGGATTTCAATTCCCGTAA

Protein Analysis

1139

Amino Acids

126.52

Weight (kDa)

6.05

Isoelectric Point (pI)

40.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_4 PF14570 133 - 181 4e-15 RING/Ubox like zinc-binding domain
Cellulose_synt PF03552 368 - 1124 0.0 Cellulose synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 453, 3311
Acc65I GGTACC 1 cut(s) 698
AccB1I GGYRCC 4 cut(s) 698, 1288, 1529, 2395
AccB7I CCANNNNNTGG 2 cut(s) 235, 3374
AccI GTMKAC 4 cut(s) 1118, 1353, 1755, 2748
AccII CGCG 1 cut(s) 316
AccIII TCCGGA 1 cut(s) 2963
AclWI GGATC 8 cut(s) 778, 1121, 1445, 1676, 1982, 2004, 2399, 2512
AcoI YGGCCR 3 cut(s) 91, 369, 1592
AcsI RAATTY 5 cut(s) 104, 662, 1647, 2290, 2664
AcuI CTGAAG 2 cut(s) 1815, 3214
AcyI GRCGYC 4 cut(s) 5, 2374, 2745, 3296
AdeI CACNNNGTG 2 cut(s) 2635, 3374
AfaI GTAC 7 cut(s) 700, 1600, 2072, 2086, 2459, 2715, 3092
AfeI AGCGCT 1 cut(s) 2974
AfiI CCNNNNNNNGG 7 cut(s) 235, 614, 978, 1489, 1691, 3374, 3377
AflIII ACRYGT 5 cut(s) 162, 314, 630, 1107, 1758
AjnI CCWGG 5 cut(s) 520, 601, 766, 977, 1096
AjuI GAANNNNNNNTTGG 2 cut(s) 1838, 1870
AleI CACNNNNGTG 2 cut(s) 245, 2547
Alw21I GWGCWC 5 cut(s) 322, 1041, 1237, 2047, 2247
Alw26I GTCTC 6 cut(s) 146, 683, 1517, 2443, 2475, 3329
AlwI GGATC 8 cut(s) 778, 1121, 1445, 1676, 1982, 2004, 2399, 2512
AlwNI CAGNNNCTG 3 cut(s) 1265, 2435, 3237
Aor13HI TCCGGA 1 cut(s) 2963
Aor51HI AGCGCT 1 cut(s) 2974
AoxI GGCC 7 cut(s) 91, 369, 1563, 1592, 1697, 1850, 2335
ApeKI GCWGC 8 cut(s) 827, 830, 1265, 2159, 2162, 2719, 2984, 3056
ApoI RAATTY 5 cut(s) 104, 662, 1647, 2290, 2664
AseI ATTAAT 3 cut(s) 1014, 2610, 2736
Asp718I GGTACC 1 cut(s) 698
AspLEI GCGC 3 cut(s) 2706, 2975, 3367
AspS9I GGNCC 9 cut(s) 202, 566, 605, 764, 1555, 1605, 1697, 1850, 2063
AsuC2I CCSGG 9 cut(s) 48, 221, 295, 1193, 1596, 2211, 2382, 2594, 3372
AsuHPI GGTGA 9 cut(s) 283, 671, 1141, 1646, 1669, 2186, 2566, 2749, 2833
AsuII TTCGAA 2 cut(s) 1825, 1977
AsuNHI GCTAGC 1 cut(s) 2302
AvaII GGWCC 7 cut(s) 202, 566, 605, 764, 1555, 1605, 2063
BalI TGGCCA 1 cut(s) 93
BanI GGYRCC 4 cut(s) 698, 1288, 1529, 2395
BanII GRGCYC 1 cut(s) 2247
BauI CACGAG 1 cut(s) 2400
BbsI GAAGAC 4 cut(s) 159, 1950, 2048, 3299
Bbv12I GWGCWC 5 cut(s) 322, 1041, 1237, 2047, 2247
BbvI GCAGC 8 cut(s) 839, 842, 1252, 2149, 2171, 2731, 2971, 3068
BceAI ACGGC 1 cut(s) 2876
BciT130I CCWGG 5 cut(s) 522, 603, 768, 979, 1098
BciVI GTATCC 3 cut(s) 499, 2525, 3267
BclI TGATCA 2 cut(s) 667, 2350
BcnI CCSGG 9 cut(s) 48, 221, 295, 1193, 1596, 2211, 2382, 2594, 3372
BcoDI GTCTC 6 cut(s) 146, 683, 1517, 2443, 2475, 3329
BfmI CTRYAG 7 cut(s) 1023, 1297, 1652, 2222, 2358, 2717, 3054
BfoI RGCGCY 1 cut(s) 2976
BfuAI ACCTGC 2 cut(s) 453, 3311
BfuI GTATCC 3 cut(s) 499, 2525, 3267
BglI GCCNNNNNGGC 1 cut(s) 2382
BglII AGATCT 1 cut(s) 1469
BlpI GCTNAGC 2 cut(s) 55, 3207
BmcAI AGTACT 1 cut(s) 2715
Bme18I GGWCC 7 cut(s) 202, 566, 605, 764, 1555, 1605, 2063
BmgT120I GGNCC 9 cut(s) 202, 566, 605, 764, 1555, 1605, 1697, 1850, 2063
BmsI GCATC 9 cut(s) 387, 484, 769, 919, 1465, 1650, 2404, 2575, 2580
BmtI GCTAGC 1 cut(s) 2306
BpiI GAAGAC 4 cut(s) 159, 1950, 2048, 3299
BpmI CTGGAG 2 cut(s) 81, 2659
Bpu10I CCTNAGC 1 cut(s) 2277
Bpu1102I GCTNAGC 2 cut(s) 55, 3207
Bpu14I TTCGAA 2 cut(s) 1825, 1977
BpuEI CTTGAG 2 cut(s) 130, 1649
BpuMI CCSGG 9 cut(s) 48, 221, 295, 1193, 1596, 2211, 2382, 2594, 3372
BsaBI GATNNNNATC 3 cut(s) 510, 2265, 3131
BsaHI GRCGYC 4 cut(s) 5, 2374, 2745, 3296
BsaI GGTCTC 3 cut(s) 683, 2475, 3329
BsaJI CCNNGG 9 cut(s) 219, 234, 246, 294, 693, 1096, 1992, 2548, 2593
BsaWI WCCGGW 1 cut(s) 2963
BsaXI ACNNNNNCTCC 2 cut(s) 2472, 2502
Bsc4I CCNNNNNNNGG 7 cut(s) 235, 614, 978, 1489, 1691, 3374, 3377
Bse1I ACTGG 3 cut(s) 1084, 2086, 2656
Bse3DI GCAATG 5 cut(s) 721, 1260, 3156, 3327, 3360
Bse8I GATNNNNATC 3 cut(s) 510, 2265, 3131
BseAI TCCGGA 1 cut(s) 2963
BseBI CCWGG 5 cut(s) 522, 603, 768, 979, 1098
BseDI CCNNGG 9 cut(s) 219, 234, 246, 294, 693, 1096, 1992, 2548, 2593
BseJI GATNNNNATC 3 cut(s) 510, 2265, 3131
BseLI CCNNNNNNNGG 7 cut(s) 235, 614, 978, 1489, 1691, 3374, 3377
BseMI GCAATG 5 cut(s) 721, 1260, 3156, 3327, 3360
BseMII CTCAG 6 cut(s) 69, 83, 1982, 2193, 2316, 3212
BseNI ACTGG 3 cut(s) 1084, 2086, 2656
BseRI GAGGAG 2 cut(s) 278, 1508
BseXI GCAGC 8 cut(s) 839, 842, 1252, 2149, 2171, 2731, 2971, 3068
BsgI GTGCAG 1 cut(s) 2778
Bsh1236I CGCG 1 cut(s) 316
BshFI GGCC 7 cut(s) 93, 371, 1565, 1594, 1699, 1852, 2337
BshNI GGYRCC 4 cut(s) 698, 1288, 1529, 2395
BsiHKAI GWGCWC 5 cut(s) 322, 1041, 1237, 2047, 2247
BslFI GGGAC 5 cut(s) 30, 197, 1541, 1595, 2226
BslI CCNNNNNNNGG 7 cut(s) 235, 614, 978, 1489, 1691, 3374, 3377
BsmAI GTCTC 6 cut(s) 146, 683, 1517, 2443, 2475, 3329
BsmBI CGTCTC 1 cut(s) 1517
BsmFI GGGAC 5 cut(s) 30, 197, 1541, 1595, 2226
BsmI GAATGC 4 cut(s) 464, 1819, 2557, 2588
BsnI GGCC 7 cut(s) 93, 371, 1565, 1594, 1699, 1852, 2337
Bso31I GGTCTC 3 cut(s) 683, 2475, 3329
Bsp119I TTCGAA 2 cut(s) 1825, 1977
Bsp1286I GDGCHC 5 cut(s) 322, 1041, 1237, 2047, 2247
Bsp13I TCCGGA 1 cut(s) 2963
Bsp1720I GCTNAGC 2 cut(s) 55, 3207
Bsp19I CCATGG 1 cut(s) 234
BspANI GGCC 7 cut(s) 93, 371, 1565, 1594, 1699, 1852, 2337
BspCNI CTCAG 6 cut(s) 68, 82, 1981, 2192, 2317, 3211
BspEI TCCGGA 1 cut(s) 2963
BspFNI CGCG 1 cut(s) 316
BspMAI CTGCAG 4 cut(s) 1301, 2362, 2721, 3058
BspMI ACCTGC 2 cut(s) 453, 3311
BspOI GCTAGC 1 cut(s) 2306
BspPI GGATC 8 cut(s) 778, 1121, 1445, 1676, 1982, 2004, 2399, 2512
BspQI GCTCTTC 1 cut(s) 1242
BspT104I TTCGAA 2 cut(s) 1825, 1977
BspT107I GGYRCC 4 cut(s) 698, 1288, 1529, 2395
BspTNI GGTCTC 3 cut(s) 683, 2475, 3329
BsrDI GCAATG 5 cut(s) 721, 1260, 3156, 3327, 3360
BsrI ACTGG 3 cut(s) 1084, 2086, 2656
BssECI CCNNGG 9 cut(s) 219, 234, 246, 294, 693, 1096, 1992, 2548, 2593
BssNAI GTATAC 1 cut(s) 1756
BssNI GRCGYC 4 cut(s) 5, 2374, 2745, 3296
BssSI CACGAG 1 cut(s) 2400
BssT1I CCWWGG 2 cut(s) 234, 693
Bst1107I GTATAC 1 cut(s) 1756
Bst2BI CACGAG 1 cut(s) 2400
Bst2UI CCWGG 5 cut(s) 522, 603, 768, 979, 1098
Bst6I CTCTTC 5 cut(s) 293, 638, 1242, 2810, 2922
BstACI GRCGYC 4 cut(s) 5, 2374, 2745, 3296
BstAPI GCANNNNNTGC 1 cut(s) 1265
BstBI TTCGAA 2 cut(s) 1825, 1977
BstC8I GCNNGC 7 cut(s) 20, 318, 391, 402, 1210, 2043, 2304
BstDSI CCRYGG 3 cut(s) 234, 246, 2548
BstEII GGTNACC 1 cut(s) 1634
BstFNI CGCG 1 cut(s) 316
BstH2I RGCGCY 1 cut(s) 2976
BstHHI GCGC 3 cut(s) 2706, 2975, 3367
BstMAI GTCTC 6 cut(s) 146, 683, 1517, 2443, 2475, 3329
BstNI CCWGG 5 cut(s) 522, 603, 768, 979, 1098
BstNSI RCATGY 6 cut(s) 166, 634, 1111, 1212, 1762, 2195
BstPI GGTNACC 1 cut(s) 1634
BstSFI CTRYAG 7 cut(s) 1023, 1297, 1652, 2222, 2358, 2717, 3054
BstUI CGCG 1 cut(s) 316
BstV1I GCAGC 8 cut(s) 839, 842, 1252, 2149, 2171, 2731, 2971, 3068
BstV2I GAAGAC 4 cut(s) 159, 1950, 2048, 3299
BstX2I RGATCY 1 cut(s) 1469
BstXI CCANNNNNNTGG 1 cut(s) 1573
BstYI RGATCY 1 cut(s) 1469
BstZ17I GTATAC 1 cut(s) 1756
BsuI GTATCC 3 cut(s) 499, 2525, 3267
BsuRI GGCC 7 cut(s) 93, 371, 1565, 1594, 1699, 1852, 2337
BtgI CCRYGG 3 cut(s) 234, 246, 2548
BtsI GCAGTG 2 cut(s) 590, 1152
BtsIMutI CAGTG 8 cut(s) 590, 642, 745, 1077, 1152, 1722, 2016, 3206
BveI ACCTGC 2 cut(s) 453, 3311
Cac8I GCNNGC 7 cut(s) 20, 318, 391, 402, 1210, 2043, 2304
CaiI CAGNNNCTG 3 cut(s) 1265, 2435, 3237
CfoI GCGC 3 cut(s) 2706, 2975, 3367
Cfr13I GGNCC 9 cut(s) 202, 566, 605, 764, 1555, 1605, 1697, 1850, 2063
CseI GACGC 4 cut(s) 932, 2382, 2734, 3304
Csp6I GTAC 7 cut(s) 699, 1599, 2071, 2085, 2458, 2714, 3091
CviQI GTAC 7 cut(s) 699, 1599, 2071, 2085, 2458, 2714, 3091
DraIII CACNNNGTG 2 cut(s) 2635, 3374
EaeI YGGCCR 3 cut(s) 91, 369, 1592
Eam1104I CTCTTC 5 cut(s) 293, 638, 1242, 2810, 2922
EarI CTCTTC 5 cut(s) 293, 638, 1242, 2810, 2922
EciI GGCGGA 2 cut(s) 275, 2431
Ecl136II GAGCTC 1 cut(s) 2245
Eco130I CCWWGG 2 cut(s) 234, 693
Eco24I GRGCYC 1 cut(s) 2247
Eco31I GGTCTC 3 cut(s) 683, 2475, 3329
Eco32I GATATC 1 cut(s) 3076
Eco47I GGWCC 7 cut(s) 202, 566, 605, 764, 1555, 1605, 2063
Eco47III AGCGCT 1 cut(s) 2974
Eco53kI GAGCTC 1 cut(s) 2245
Eco57I CTGAAG 2 cut(s) 1815, 3214
Eco91I GGTNACC 1 cut(s) 1634
EcoICRI GAGCTC 1 cut(s) 2245
EcoO109I RGGNCCY 1 cut(s) 1555
EcoO65I GGTNACC 1 cut(s) 1634
EcoRI GAATTC 1 cut(s) 1647
EcoRII CCWGG 5 cut(s) 520, 601, 766, 977, 1096
EcoRV GATATC 1 cut(s) 3076
EcoT14I CCWWGG 2 cut(s) 234, 693
EcoT22I ATGCAT 1 cut(s) 2590
EcoT38I GRGCYC 1 cut(s) 2247
ErhI CCWWGG 2 cut(s) 234, 693
Esp3I CGTCTC 1 cut(s) 1517
FaqI GGGAC 5 cut(s) 30, 197, 1541, 1595, 2226
FbaI TGATCA 2 cut(s) 667, 2350
FblI GTMKAC 4 cut(s) 1118, 1353, 1755, 2748
FriOI GRGCYC 1 cut(s) 2247
GlaI GCGC 3 cut(s) 2705, 2974, 3366
GsuI CTGGAG 2 cut(s) 81, 2659
HaeII RGCGCY 1 cut(s) 2976
HaeIII GGCC 7 cut(s) 93, 371, 1565, 1594, 1699, 1852, 2337
HgaI GACGC 4 cut(s) 932, 2382, 2734, 3304
HhaI GCGC 3 cut(s) 2706, 2975, 3367
Hin1I GRCGYC 4 cut(s) 5, 2374, 2745, 3296
Hin6I GCGC 3 cut(s) 2704, 2973, 3365
HinP1I GCGC 3 cut(s) 2704, 2973, 3365
HincII GTYRAC 2 cut(s) 1354, 3145
HindII GTYRAC 2 cut(s) 1354, 3145
HindIII AAGCTT 2 cut(s) 1709, 3209
HphI GGTGA 9 cut(s) 283, 671, 1141, 1646, 1669, 2186, 2566, 2749, 2833
Hpy166II GTNNAC 7 cut(s) 1119, 1354, 1756, 2749, 3105, 3145, 3383
Hpy8I GTNNAC 7 cut(s) 1119, 1354, 1756, 2749, 3105, 3145, 3383
Hpy99I CGWCG 1 cut(s) 2078
HpyCH4IV ACGT 1 cut(s) 2073
HpySE526I ACGT 1 cut(s) 2073
Hsp92I GRCGYC 4 cut(s) 5, 2374, 2745, 3296
HspAI GCGC 3 cut(s) 2704, 2973, 3365
Kpn2I TCCGGA 1 cut(s) 2963
KpnI GGTACC 1 cut(s) 702
Ksp22I TGATCA 2 cut(s) 667, 2350
LguI GCTCTTC 1 cut(s) 1242
LmnI GCTCC 7 cut(s) 265, 374, 532, 1138, 1543, 2608, 3221
Lsp1109I GCAGC 8 cut(s) 839, 842, 1252, 2149, 2171, 2731, 2971, 3068
LweI GCATC 9 cut(s) 387, 484, 769, 919, 1465, 1650, 2404, 2575, 2580
MaeII ACGT 1 cut(s) 2073
MaeIII GTNAC 8 cut(s) 310, 354, 852, 1634, 1874, 2174, 2509, 2524
MfeI CAATTG 3 cut(s) 596, 822, 948
MflI RGATCY 1 cut(s) 1469
MhlI GDGCHC 5 cut(s) 322, 1041, 1237, 2047, 2247
MlsI TGGCCA 1 cut(s) 93
MluI ACGCGT 1 cut(s) 314
MluNI TGGCCA 1 cut(s) 93
MlyI GAGTC 6 cut(s) 447, 1448, 1734, 2171, 2200, 2619
MmeI TCCRAC 3 cut(s) 1869, 2056, 2474
Mox20I TGGCCA 1 cut(s) 93
Mph1103I ATGCAT 1 cut(s) 2590
MroI TCCGGA 1 cut(s) 2963
MscI TGGCCA 1 cut(s) 93
MseI TTAA 7 cut(s) 723, 1014, 1508, 1863, 2610, 2736, 3099
MslI CAYNNNNRTG 6 cut(s) 245, 635, 1106, 1112, 1571, 2547
Msp20I TGGCCA 1 cut(s) 93
MspA1I CMGCKG 2 cut(s) 59, 2162
MunI CAATTG 3 cut(s) 596, 822, 948
Mva1269I GAATGC 4 cut(s) 464, 1819, 2557, 2588
MvaI CCWGG 5 cut(s) 522, 603, 768, 979, 1098
MvnI CGCG 1 cut(s) 316
NciI CCSGG 9 cut(s) 48, 221, 295, 1193, 1596, 2211, 2382, 2594, 3372
NcoI CCATGG 1 cut(s) 234
NheI GCTAGC 1 cut(s) 2302
NmuCI GTSAC 6 cut(s) 354, 1634, 1874, 2174, 2509, 2524
NsiI ATGCAT 1 cut(s) 2590
NspI RCATGY 6 cut(s) 166, 634, 1111, 1212, 1762, 2195
NspV TTCGAA 2 cut(s) 1825, 1977
OliI CACNNNNGTG 2 cut(s) 245, 2547
PaeI GCATGC 1 cut(s) 1212
PciI ACATGT 4 cut(s) 162, 630, 1107, 1758
PciSI GCTCTTC 1 cut(s) 1242
PctI GAATGC 4 cut(s) 464, 1819, 2557, 2588
PfeI GAWTC 7 cut(s) 300, 344, 982, 1974, 2309, 3001, 3118
PflMI CCANNNNNTGG 2 cut(s) 235, 3374
PfoI TCCNGGA 2 cut(s) 977, 2209
PleI GAGTC 6 cut(s) 446, 1448, 1734, 2171, 2200, 2619
PpsI GAGTC 6 cut(s) 446, 1448, 1734, 2171, 2200, 2619
PpuMI RGGWCCY 1 cut(s) 1555
PscI ACATGT 4 cut(s) 162, 630, 1107, 1758
PshBI ATTAAT 3 cut(s) 1014, 2610, 2736
Psp124BI GAGCTC 1 cut(s) 2247
Psp5II RGGWCCY 1 cut(s) 1555
Psp6I CCWGG 5 cut(s) 520, 601, 766, 977, 1096
PspEI GGTNACC 1 cut(s) 1634
PspGI CCWGG 5 cut(s) 520, 601, 766, 977, 1096
PspPI GGNCC 9 cut(s) 202, 566, 605, 764, 1555, 1605, 1697, 1850, 2063
PspPPI RGGWCCY 1 cut(s) 1555
PstI CTGCAG 4 cut(s) 1301, 2362, 2721, 3058
PstNI CAGNNNCTG 3 cut(s) 1265, 2435, 3237
PsuI RGATCY 1 cut(s) 1469
PvuII CAGCTG 2 cut(s) 59, 2162
RsaI GTAC 7 cut(s) 700, 1600, 2072, 2086, 2459, 2715, 3092
RsaNI GTAC 7 cut(s) 699, 1599, 2071, 2085, 2458, 2714, 3091
RseI CAYNNNNRTG 6 cut(s) 245, 635, 1106, 1112, 1571, 2547
SacI GAGCTC 1 cut(s) 2247
SalI GTCGAC 1 cut(s) 1352
SapI GCTCTTC 1 cut(s) 1242
SaqAI TTAA 7 cut(s) 723, 1014, 1508, 1863, 2610, 2736, 3099
Sau96I GGNCC 9 cut(s) 202, 566, 605, 764, 1555, 1605, 1697, 1850, 2063
ScaI AGTACT 1 cut(s) 2715
SchI GAGTC 6 cut(s) 447, 1448, 1734, 2171, 2200, 2619
SduI GDGCHC 5 cut(s) 322, 1041, 1237, 2047, 2247
SfaNI GCATC 9 cut(s) 387, 484, 769, 919, 1465, 1650, 2404, 2575, 2580
SfcI CTRYAG 7 cut(s) 1023, 1297, 1652, 2222, 2358, 2717, 3054
SfuI TTCGAA 2 cut(s) 1825, 1977
SinI GGWCC 7 cut(s) 202, 566, 605, 764, 1555, 1605, 2063
SmiMI CAYNNNNRTG 6 cut(s) 245, 635, 1106, 1112, 1571, 2547
SmlI CTYRAG 2 cut(s) 145, 1664
SmoI CTYRAG 2 cut(s) 145, 1664
SphI GCATGC 1 cut(s) 1212
SspI AATATT 1 cut(s) 1312
SstI GAGCTC 1 cut(s) 2247
StyI CCWWGG 2 cut(s) 234, 693
TaiI ACGT 1 cut(s) 2076
TaqII GACCGA 1 cut(s) 2499
TatI WGTACW 1 cut(s) 2713
TauI GCSGC 7 cut(s) 54, 805, 1777, 2147, 2159, 2340, 3392
TfiI GAWTC 7 cut(s) 300, 344, 982, 1974, 2309, 3001, 3118
Tru1I TTAA 7 cut(s) 723, 1014, 1508, 1863, 2610, 2736, 3099
Tru9I TTAA 7 cut(s) 723, 1014, 1508, 1863, 2610, 2736, 3099
TscAI CASTG 8 cut(s) 597, 642, 745, 1084, 1159, 1729, 2023, 3206
TseFI GTSAC 6 cut(s) 354, 1634, 1874, 2174, 2509, 2524
TseI GCWGC 8 cut(s) 827, 830, 1265, 2159, 2162, 2719, 2984, 3056
Tsp45I GTSAC 6 cut(s) 354, 1634, 1874, 2174, 2509, 2524
TspDTI ATGAA 8 cut(s) 206, 437, 656, 768, 1514, 1826, 1846, 2958
TspGWI ACGGA 3 cut(s) 235, 1242, 1597
TspRI CASTG 8 cut(s) 597, 642, 745, 1084, 1159, 1729, 2023, 3206
Van91I CCANNNNNTGG 2 cut(s) 235, 3374
VpaK11BI GGWCC 7 cut(s) 202, 566, 605, 764, 1555, 1605, 2063
VspI ATTAAT 3 cut(s) 1014, 2610, 2736
XapI RAATTY 5 cut(s) 104, 662, 1647, 2290, 2664
XbaI TCTAGA 1 cut(s) 985
XceI RCATGY 6 cut(s) 166, 634, 1111, 1212, 1762, 2195
XcmI CCANNNNNNNNNTGG 2 cut(s) 1566, 2977
XmiI GTMKAC 4 cut(s) 1118, 1353, 1755, 2748
ZrmI AGTACT 1 cut(s) 2715
Zsp2I ATGCAT 1 cut(s) 2590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.