RchiOBHm_Chr6g0281541

Belongs to the glycosyltransferase 2 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
44851073 .. 44855111
4039 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ25250

Sequence Viewer

Length: 3411 bp
ATGGCGTCCTTGAACAACCAGCCATCCAAGAAGGCAATACGCACCCCCGGAGGTTCAGCTGGTAGCTCTCAGGGTAAGGCTAATTCAAGTGGCCAAACTGTGAAATTCGCTAGACGAACTTCGAGCGGAAGGTATGTCAGTCTCTCAAGAGAAGACCTTGACATGTCAGGGGAATTGTCAGGGGACTACATGAACTACACAGTTCATATTCCTCCCACCCCGGATAACCAACCCATGGACACTTCTGTGGCTGTCAAGGCGGAGGAGCAATATGTTTCTAACTCACTCTTCACCGGGGGATTCAACAGCGTGACACGTGCTCATTTGATGGACAAGGTAATTGATTCCGAGGTGACACATCCACAGATGGCCGGAGCCAAAGGTTCGGCGTGCATGATGCCTGCTTGTGACGGTAAGGTGATGAAGGACGAGAGGGGAGTCGATATAACTCCTTGTGATTGCAGGTTCAAAATATGTAGAGATTGCTATATGGATGCACAGAAGGATACGAATCTTTGTCCTGGTTGCAAGGAGCCATACCGAATGGGGGACTTAGATGATGATGGACCAGATTATGAGCGTGGAGGAGCATTGCAATTGCCTGGACCAGATGGAAATAGGGATAACATGTCAATGATGAAGAGGAACCAAACAGGTGAATTTGATCACAACAGGTGGTTGTTTGAGACAAGGGGTACCTATGGTGTTGGTAATGCATTTAATCCCCCAGAGGACGGTGGTTATGATGAAGGGTTCGGACCAGGATCAATGGATGCTACCGAAAAGGCTTTTAAGCCGCTAAGTAGGAAGATACCAATTGCAGCAGCTGTTATCAGCCCTTACAGGTTACTGATCTTTATTCGATTCATAGTGTTGTGTTTCTTCTTGCATTGGAGAGTAGTGCATCCGAACAATGACGCAAGATGGTTGTGGATGATGTCAATTGTTTGTGAGCTGTGGTTTGCCTTCTCCTGGATTTTGGATCAAACTCCAAAGTTCTTCCCTATTAATCGTGCTACAGACCTAGAAGTCCTATATGAAAAGTTTGATATGCCATCTCCTTCCAATCCCACTGGTCGCTCAGACCTCCCCGGCATTGACATGTTTGTCTCTACTGCTGATCCTGACAAGGAGCCACCTCTTACCACTGCTAACACCATTCTTTCAATCTTGGCTGTTGATTACCCGGTGGAGAAGATTGCATGCTACATCTCCGATGATGGAGGTGCTCTTCTTACTTTTGAGGCAATGGCAGAGGCTGCTAGTTTTGCAGATTTGTGGGTGCCATTCTGCAAGAAACACAATATTGAACCAAGAAATCCTGATAGTTACTTCGCCTTAAAAGTTGACCCTACCAAGAACAAGAGCAGGACTGACTTTGTGAAGGATAGAAGGAAGATCAAAAGGGAGTATGATGAGTTCAAGGTAAGGATTAACGGGCTTCCTGACTCTATTAGGAGAAGATCTGATGCCTTCCATGCCAGGGAGGAAATGAAAATGTTAAAGCACATGAGGGAGACCGGTGCTGACCCTTTGGAGCAAGTCAAGGTCCCAAAGGCCACGTGGATGGCTGATGGCACACATTGGCCGGGTACTTGGTCCGTCCCTTCAAGTGACCATGCGAAGGGTGACCATTCAGGAATTCTACAGGTGATGCTCAAGCCTCCTAGCCCTGATCCACTAATGGGAGGGGCAGATGACAAGCTCTTAGATTTCACAGATGTTGATATACGACTCCCAATGTTTGTGTACATGTCAAGAGAGAAGCGGCCAGGCTATGATCACAACAAGAAAGCCGGTGCCATGAATGCCTTGGTACGAACTTCAGCCATCTTGTCCAATGGGCCATTCATCCTCAACCTCGACTGTGACCACTACATCTACAACTGCAAGGCCATCCGAGAAGGAATGTGCTTCATGATGGACCGAGGAGGAGAAGGTGTCTGCTACATTCAGTTCCCTCAGAGATTTGAAGGCATTGATCCCTCGGATCGTTATGCCAACCATAACACTGTGTTTTTCGATAGCAATATGCGTGCTCTTGATGGTCTTCAAGGTCCAATGTACGTGGGAACTGGGACAATGTTTAGGCGGTTTGCCCTTTATGGTTTTGACCCTCCAAATCCTGACAAGGTCGCAGCACAGAAGGCGGCAACAGCAGCTACTGGTGACTCAGAGACACAAAAAGAGCCCTTGACGGCACCTCCTGCACAGACCACACAGCCCTTGACAGCTAGTGAACTCGACCCTGATCTTGATACCAATCTGCTGCCTAAGCGTTTTGGAAATTCTACCATGTTAGCTGAATCCATACCTGTTGCTGAGTATCAAGGACGCCCCCTAGCTGATCATCCTGCAGTCAAATTCGGACGCCCTCCTGGTATTCTTAGGGTACCTCGTGATCCACTTGATGCTACAACTGTTGCTGAAGCTGTCTCCGCCATTTCTTGCTGGTACGAGGACAAGACTGAATGGGGAGACCGAGTGGGTTGGATTTATGGATCAGTCACAGAAGATGTCGTGACAGGCTACCGTATGCACAACCGTGGATGGCATTCAGTTTATTGCATCACCAAGCGTGATGCATTCCGGGGTTCAGCTCCGATTAATCTTACTGATCGACTCCACCAAGTGCTTAGGTGGGCAACTGGCTCTGTCGAAATTTTCTTCTCCAGAAACAATGCCATAATTGGTTCCATGAAACTGAAATTACTGCAGCGTCTTGCTTACATTAACGTTGGCGTCTACCCTTTCACCTCTCTCTTTCTCATTTTGTACTGCTTCCTCCCTGCACTCTCACTCTACTCTGGGCAGTTTATCGTGGCTAATGTCAATGTCACCTTCTTAGCCTTTTTGCTAACCATTACATTATGCCTGATAGGGCTGGCCCTGCTAGAGGTGAAGTGGTCTGGCATAGGATTGGAAGAGTGGTGGAGGAATGAACAGTTCTGGCTCATTTCCGGAACCAGCGCTCACCTTGCTGCTGTGGTGCAAGGGATTCTCAAAGTTATTGCAGGAATTGAAATCTCTTTCACACTCACTTCTAAGTCTGCAGGAGATGAGAATGATGATGTCTTTGCAGAATTGCACCTTGTTAAGTGGACTTGGTTGATGATTCCCCCAATTGTTATCGCACTCGTCAACATAATTGCCATTTGCATTGCAGTTTCAAGAGAGCTTTATGCTACAAATGCTCAGTGGGCTAAGCTTGTTGGTGGAACTTTCTTCAGTTTCTGGGTGTTGGCTCATTTGTATCCTTTTGCAAAGGGTTTGATGGGAAGGAGAGGAAAGACGCCTACAATTGTGTTTGTTTGGGCAGGTCTCATTGCAATTACGCTATCCTTGCTCTGGGCTGCCGTTGCGCCACCACCAGGAGGCGGACAAGCGGCTGGACAATTCCAATTCCCGTAG

Protein Analysis

1136

Amino Acids

126.33

Weight (kDa)

6.17

Isoelectric Point (pI)

38.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_4 PF14570 133 - 181 6e-15 RING/Ubox like zinc-binding domain
Cellulose_synt PF03552 366 - 1122 0.0 Cellulose synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1028, 1106
Acc36I ACCTGC 2 cut(s) 453, 3308
Acc65I GGTACC 2 cut(s) 695, 2392
AccB1I GGYRCC 5 cut(s) 695, 1282, 1799, 2200, 2392
AccB7I CCANNNNNTGG 1 cut(s) 235
AccBSI CCGCTC 1 cut(s) 126
AccI GTMKAC 1 cut(s) 2745
AccIII TCCGGA 1 cut(s) 2960
AciI CCGC 9 cut(s) 126, 260, 797, 1768, 2092, 2150, 2439, 3378, 3386
AclI AACGTT 1 cut(s) 2736
AclWI GGATC 8 cut(s) 772, 990, 1115, 1670, 1976, 1998, 2396, 2509
AcoI YGGCCR 4 cut(s) 91, 369, 1586, 1769
AcsI RAATTY 6 cut(s) 104, 659, 1641, 2287, 2363, 2661
AcuI CTGAAG 3 cut(s) 1809, 2448, 3211
AcvI CACGTG 2 cut(s) 317, 1563
AcyI GRCGYC 5 cut(s) 5, 2335, 2371, 2742, 3293
AdeI CACNNNGTG 1 cut(s) 2632
AfaI GTAC 8 cut(s) 697, 1594, 1751, 1818, 2066, 2394, 2456, 2777
AfeI AGCGCT 1 cut(s) 2971
AflIII ACRYGT 5 cut(s) 162, 314, 627, 1101, 1752
AgeI ACCGGT 1 cut(s) 1520
AjnI CCWGG 8 cut(s) 520, 601, 760, 971, 1481, 1771, 2377, 3370
AjuI GAANNNNNNNTTGG 2 cut(s) 1832, 1864
AleI CACNNNNGTG 2 cut(s) 245, 2544
Alw21I GWGCWC 3 cut(s) 322, 1231, 2041
Alw26I GTCTC 8 cut(s) 146, 680, 1114, 1511, 2171, 2440, 2472, 3326
AlwI GGATC 8 cut(s) 772, 990, 1115, 1670, 1976, 1998, 2396, 2509
AlwNI CAGNNNCTG 4 cut(s) 827, 1259, 2165, 3234
Aor13HI TCCGGA 1 cut(s) 2960
Aor51HI AGCGCT 1 cut(s) 2971
AoxI GGCC 8 cut(s) 91, 369, 1557, 1586, 1769, 1844, 1893, 2886
ApeKI GCWGC 9 cut(s) 821, 824, 1259, 2138, 2159, 2269, 2716, 2981, 3353
ApoI RAATTY 6 cut(s) 104, 659, 1641, 2287, 2363, 2661
AseI ATTAAT 2 cut(s) 1008, 2607
AsiGI ACCGGT 1 cut(s) 1520
Asp718I GGTACC 2 cut(s) 695, 2392
AspLEI GCGC 2 cut(s) 2972, 3364
AspS9I GGNCC 9 cut(s) 566, 605, 758, 1549, 1599, 1844, 1924, 2057, 2887
AsuC2I CCSGG 7 cut(s) 48, 221, 295, 1092, 1187, 1590, 2591
AvaII GGWCC 7 cut(s) 566, 605, 758, 1549, 1599, 1924, 2057
BalI TGGCCA 1 cut(s) 93
BanI GGYRCC 5 cut(s) 695, 1282, 1799, 2200, 2392
BanII GRGCYC 1 cut(s) 2193
BauI CACGAG 1 cut(s) 2397
BbrPI CACGTG 2 cut(s) 317, 1563
BbsI GAAGAC 2 cut(s) 159, 2042
Bbv12I GWGCWC 3 cut(s) 322, 1231, 2041
BbvI GCAGC 9 cut(s) 833, 836, 1246, 2150, 2171, 2256, 2728, 2968, 3340
BceAI ACGGC 2 cut(s) 2214, 3341
BciT130I CCWGG 8 cut(s) 522, 603, 762, 973, 1483, 1773, 2379, 3372
BciVI GTATCC 2 cut(s) 499, 3264
BclI TGATCA 3 cut(s) 664, 1780, 2347
BcnI CCSGG 7 cut(s) 48, 221, 295, 1092, 1187, 1590, 2591
BcoDI GTCTC 8 cut(s) 146, 680, 1114, 1511, 2171, 2440, 2472, 3326
BfaI CTAG 7 cut(s) 111, 1025, 1263, 1668, 2235, 2342, 2894
BfmI CTRYAG 5 cut(s) 1017, 1646, 2355, 2714, 3051
BfoI RGCGCY 1 cut(s) 2973
BfuAI ACCTGC 2 cut(s) 453, 3308
BfuI GTATCC 2 cut(s) 499, 3264
BglII AGATCT 1 cut(s) 1463
BlpI GCTNAGC 1 cut(s) 3204
Bme18I GGWCC 7 cut(s) 566, 605, 758, 1549, 1599, 1924, 2057
BmgT120I GGNCC 9 cut(s) 566, 605, 758, 1549, 1599, 1844, 1924, 2057, 2887
BmrI ACTGGG 1 cut(s) 2085
BmsI GCATC 9 cut(s) 387, 484, 763, 913, 1459, 1644, 2401, 2572, 2577
BmuI ACTGGG 1 cut(s) 2085
BpiI GAAGAC 2 cut(s) 159, 2042
BpmI CTGGAG 1 cut(s) 2656
Bpu10I CCTNAGC 2 cut(s) 2274, 2636
Bpu1102I GCTNAGC 1 cut(s) 3204
BpuEI CTTGAG 2 cut(s) 130, 1643
BpuMI CCSGG 7 cut(s) 48, 221, 295, 1092, 1187, 1590, 2591
BsaAI YACGTR 3 cut(s) 317, 1563, 2068
BsaBI GATNNNNATC 2 cut(s) 510, 2262
BsaHI GRCGYC 5 cut(s) 5, 2335, 2371, 2742, 3293
BsaI GGTCTC 3 cut(s) 1511, 2472, 3326
BsaWI WCCGGW 2 cut(s) 1520, 2960
BsaXI ACNNNNNCTCC 6 cut(s) 1926, 1956, 2188, 2218, 2469, 2499
Bse118I RCCGGY 2 cut(s) 1520, 1796
Bse1I ACTGG 4 cut(s) 1078, 2080, 2170, 2653
Bse3DI GCAATG 4 cut(s) 590, 1254, 3159, 3324
Bse8I GATNNNNATC 2 cut(s) 510, 2262
BseAI TCCGGA 1 cut(s) 2960
BseBI CCWGG 8 cut(s) 522, 603, 762, 973, 1483, 1773, 2379, 3372
BseJI GATNNNNATC 2 cut(s) 510, 2262
BseMI GCAATG 4 cut(s) 590, 1254, 3159, 3324
BseMII CTCAG 6 cut(s) 83, 1095, 1976, 2187, 2313, 3209
BseNI ACTGG 4 cut(s) 1078, 2080, 2170, 2653
BseRI GAGGAG 4 cut(s) 278, 600, 1944, 1947
BseXI GCAGC 9 cut(s) 833, 836, 1246, 2150, 2171, 2256, 2728, 2968, 3340
BsgI GTGCAG 2 cut(s) 2193, 2775
BshFI GGCC 8 cut(s) 93, 371, 1559, 1588, 1771, 1846, 1895, 2888
BshNI GGYRCC 5 cut(s) 695, 1282, 1799, 2200, 2392
BshTI ACCGGT 1 cut(s) 1520
BsiHKAI GWGCWC 3 cut(s) 322, 1231, 2041
BslFI GGGAC 5 cut(s) 197, 563, 1535, 1589, 2092
BsmAI GTCTC 8 cut(s) 146, 680, 1114, 1511, 2171, 2440, 2472, 3326
BsmFI GGGAC 5 cut(s) 197, 563, 1535, 1589, 2092
BsmI GAATGC 3 cut(s) 1813, 2554, 2585
BsnI GGCC 8 cut(s) 93, 371, 1559, 1588, 1771, 1846, 1895, 2888
Bso31I GGTCTC 3 cut(s) 1511, 2472, 3326
Bsp1286I GDGCHC 4 cut(s) 322, 1231, 2041, 2193
Bsp13I TCCGGA 1 cut(s) 2960
Bsp1407I TGTACA 1 cut(s) 1749
Bsp1720I GCTNAGC 1 cut(s) 3204
Bsp19I CCATGG 1 cut(s) 234
BspACI CCGC 9 cut(s) 126, 260, 797, 1768, 2092, 2150, 2439, 3378, 3386
BspANI GGCC 8 cut(s) 93, 371, 1559, 1588, 1771, 1846, 1895, 2888
BspCNI CTCAG 6 cut(s) 82, 1094, 1975, 2186, 2314, 3208
BspEI TCCGGA 1 cut(s) 2960
BspHI TCATGA 1 cut(s) 1917
BspMAI CTGCAG 3 cut(s) 2359, 2718, 3055
BspMI ACCTGC 2 cut(s) 453, 3308
BspPI GGATC 8 cut(s) 772, 990, 1115, 1670, 1976, 1998, 2396, 2509
BspQI GCTCTTC 1 cut(s) 1236
BspT107I GGYRCC 5 cut(s) 695, 1282, 1799, 2200, 2392
BspTNI GGTCTC 3 cut(s) 1511, 2472, 3326
BsrBI CCGCTC 1 cut(s) 126
BsrDI GCAATG 4 cut(s) 590, 1254, 3159, 3324
BsrFI RCCGGY 2 cut(s) 1520, 1796
BsrGI TGTACA 1 cut(s) 1749
BsrI ACTGG 4 cut(s) 1078, 2080, 2170, 2653
BssAI RCCGGY 2 cut(s) 1520, 1796
BssNI GRCGYC 5 cut(s) 5, 2335, 2371, 2742, 3293
BssSI CACGAG 1 cut(s) 2397
BssT1I CCWWGG 2 cut(s) 234, 1812
Bst2BI CACGAG 1 cut(s) 2397
Bst2UI CCWGG 8 cut(s) 522, 603, 762, 973, 1483, 1773, 2379, 3372
Bst6I CTCTTC 4 cut(s) 293, 635, 1236, 2919
BstACI GRCGYC 5 cut(s) 5, 2335, 2371, 2742, 3293
BstAPI GCANNNNNTGC 2 cut(s) 1259, 2207
BstAUI TGTACA 1 cut(s) 1749
BstBAI YACGTR 3 cut(s) 317, 1563, 2068
BstC8I GCNNGC 5 cut(s) 391, 402, 1204, 2037, 2886
BstDSI CCRYGG 2 cut(s) 234, 2545
BstEII GGTNACC 1 cut(s) 1628
BstENI CCTNNNNNAGG 1 cut(s) 2894
BstH2I RGCGCY 1 cut(s) 2973
BstHHI GCGC 2 cut(s) 2972, 3364
BstMAI GTCTC 8 cut(s) 146, 680, 1114, 1511, 2171, 2440, 2472, 3326
BstNI CCWGG 8 cut(s) 522, 603, 762, 973, 1483, 1773, 2379, 3372
BstNSI RCATGY 5 cut(s) 166, 631, 1105, 1206, 1756
BstPI GGTNACC 1 cut(s) 1628
BstSFI CTRYAG 5 cut(s) 1017, 1646, 2355, 2714, 3051
BstV1I GCAGC 9 cut(s) 833, 836, 1246, 2150, 2171, 2256, 2728, 2968, 3340
BstV2I GAAGAC 2 cut(s) 159, 2042
BstX2I RGATCY 1 cut(s) 1463
BstXI CCANNNNNNTGG 1 cut(s) 1567
BstYI RGATCY 1 cut(s) 1463
BsuI GTATCC 2 cut(s) 499, 3264
BsuRI GGCC 8 cut(s) 93, 371, 1559, 1588, 1771, 1846, 1895, 2888
BtgI CCRYGG 2 cut(s) 234, 2545
BtsI GCAGTG 1 cut(s) 1146
BtsIMutI CAGTG 4 cut(s) 1071, 1146, 2010, 3203
BveI ACCTGC 2 cut(s) 453, 3308
Cac8I GCNNGC 5 cut(s) 391, 402, 1204, 2037, 2886
CaiI CAGNNNCTG 4 cut(s) 827, 1259, 2165, 3234
CciI TCATGA 1 cut(s) 1917
CfoI GCGC 2 cut(s) 2972, 3364
Cfr10I RCCGGY 2 cut(s) 1520, 1796
Cfr13I GGNCC 9 cut(s) 566, 605, 758, 1549, 1599, 1844, 1924, 2057, 2887
CseI GACGC 6 cut(s) 926, 2343, 2379, 2708, 2731, 3301
Csp6I GTAC 8 cut(s) 696, 1593, 1750, 1817, 2065, 2393, 2455, 2776
CspAI ACCGGT 1 cut(s) 1520
CspCI CAANNNNNGTGG 2 cut(s) 2049, 2084
CviQI GTAC 8 cut(s) 696, 1593, 1750, 1817, 2065, 2393, 2455, 2776
DraIII CACNNNGTG 1 cut(s) 2632
DrdI GACNNNNNNGTC 2 cut(s) 1028, 1106
DseDI GACNNNNNNGTC 2 cut(s) 1028, 1106
EaeI YGGCCR 4 cut(s) 91, 369, 1586, 1769
Eam1104I CTCTTC 4 cut(s) 293, 635, 1236, 2919
EarI CTCTTC 4 cut(s) 293, 635, 1236, 2919
EciI GGCGGA 3 cut(s) 275, 2428, 3393
Eco130I CCWWGG 2 cut(s) 234, 1812
Eco24I GRGCYC 1 cut(s) 2193
Eco31I GGTCTC 3 cut(s) 1511, 2472, 3326
Eco47I GGWCC 7 cut(s) 566, 605, 758, 1549, 1599, 1924, 2057
Eco47III AGCGCT 1 cut(s) 2971
Eco57I CTGAAG 3 cut(s) 1809, 2448, 3211
Eco72I CACGTG 2 cut(s) 317, 1563
Eco91I GGTNACC 1 cut(s) 1628
EcoNI CCTNNNNNAGG 1 cut(s) 2894
EcoO109I RGGNCCY 1 cut(s) 1549
EcoO65I GGTNACC 1 cut(s) 1628
EcoRI GAATTC 1 cut(s) 1641
EcoRII CCWGG 8 cut(s) 520, 601, 760, 971, 1481, 1771, 2377, 3370
EcoT14I CCWWGG 2 cut(s) 234, 1812
EcoT22I ATGCAT 2 cut(s) 718, 2587
EcoT38I GRGCYC 1 cut(s) 2193
ErhI CCWWGG 2 cut(s) 234, 1812
FaqI GGGAC 5 cut(s) 197, 563, 1535, 1589, 2092
FbaI TGATCA 3 cut(s) 664, 1780, 2347
FblI GTMKAC 1 cut(s) 2745
FriOI GRGCYC 1 cut(s) 2193
FspBI CTAG 7 cut(s) 111, 1025, 1263, 1668, 2235, 2342, 2894
GlaI GCGC 2 cut(s) 2971, 3363
GsuI CTGGAG 1 cut(s) 2656
HaeII RGCGCY 1 cut(s) 2973
HaeIII GGCC 8 cut(s) 93, 371, 1559, 1588, 1771, 1846, 1895, 2888
HgaI GACGC 6 cut(s) 926, 2343, 2379, 2708, 2731, 3301
HhaI GCGC 2 cut(s) 2972, 3364
Hin1I GRCGYC 5 cut(s) 5, 2335, 2371, 2742, 3293
Hin6I GCGC 2 cut(s) 2970, 3362
HinP1I GCGC 2 cut(s) 2970, 3362
HincII GTYRAC 2 cut(s) 1348, 3142
HindII GTYRAC 2 cut(s) 1348, 3142
HindIII AAGCTT 1 cut(s) 3206
Hpy166II GTNNAC 6 cut(s) 1348, 1750, 2240, 2746, 3102, 3142
Hpy8I GTNNAC 6 cut(s) 1348, 1750, 2240, 2746, 3102, 3142
HpyCH4IV ACGT 4 cut(s) 316, 1562, 2067, 2736
HpySE526I ACGT 4 cut(s) 316, 1562, 2067, 2736
Hsp92I GRCGYC 5 cut(s) 5, 2335, 2371, 2742, 3293
HspAI GCGC 2 cut(s) 2970, 3362
Kpn2I TCCGGA 1 cut(s) 2960
KpnI GGTACC 2 cut(s) 699, 2396
Ksp22I TGATCA 3 cut(s) 664, 1780, 2347
LguI GCTCTTC 1 cut(s) 1236
LmnI GCTCC 7 cut(s) 265, 374, 532, 587, 1132, 1537, 2605
Lsp1109I GCAGC 9 cut(s) 833, 836, 1246, 2150, 2171, 2256, 2728, 2968, 3340
LweI GCATC 9 cut(s) 387, 484, 763, 913, 1459, 1644, 2401, 2572, 2577
MaeI CTAG 7 cut(s) 111, 1025, 1263, 1668, 2235, 2342, 2894
MaeII ACGT 4 cut(s) 316, 1562, 2067, 2736
MbiI CCGCTC 1 cut(s) 126
MfeI CAATTG 5 cut(s) 596, 816, 942, 3123, 3300
MflI RGATCY 1 cut(s) 1463
MhlI GDGCHC 4 cut(s) 322, 1231, 2041, 2193
MlsI TGGCCA 1 cut(s) 93
MluNI TGGCCA 1 cut(s) 93
MlyI GAGTC 5 cut(s) 447, 1442, 1728, 2165, 2616
MmeI TCCRAC 1 cut(s) 2471
Mox20I TGGCCA 1 cut(s) 93
Mph1103I ATGCAT 2 cut(s) 718, 2587
MroI TCCGGA 1 cut(s) 2960
MscI TGGCCA 1 cut(s) 93
MseI TTAA 9 cut(s) 720, 792, 1008, 1340, 1434, 1502, 2607, 2733, 3096
MslI CAYNNNNRTG 5 cut(s) 245, 632, 1100, 1565, 2544
Msp20I TGGCCA 1 cut(s) 93
MspA1I CMGCKG 2 cut(s) 59, 827
MunI CAATTG 5 cut(s) 596, 816, 942, 3123, 3300
Mva1269I GAATGC 3 cut(s) 1813, 2554, 2585
MvaI CCWGG 8 cut(s) 522, 603, 762, 973, 1483, 1773, 2379, 3372
NciI CCSGG 7 cut(s) 48, 221, 295, 1092, 1187, 1590, 2591
NcoI CCATGG 1 cut(s) 234
NsiI ATGCAT 2 cut(s) 718, 2587
NspI RCATGY 5 cut(s) 166, 631, 1105, 1206, 1756
OliI CACNNNNGTG 2 cut(s) 245, 2544
PaeI GCATGC 1 cut(s) 1206
PagI TCATGA 1 cut(s) 1917
PciI ACATGT 4 cut(s) 162, 627, 1101, 1752
PciSI GCTCTTC 1 cut(s) 1236
PctI GAATGC 3 cut(s) 1813, 2554, 2585
PfeI GAWTC 7 cut(s) 300, 344, 511, 864, 2306, 2998, 3115
PflFI GACNNNGTC 1 cut(s) 2132
PflMI CCANNNNNTGG 1 cut(s) 235
PfoI TCCNGGA 1 cut(s) 971
PinAI ACCGGT 1 cut(s) 1520
PleI GAGTC 5 cut(s) 446, 1442, 1728, 2165, 2616
PmaCI CACGTG 2 cut(s) 317, 1563
PmlI CACGTG 2 cut(s) 317, 1563
PpsI GAGTC 5 cut(s) 446, 1442, 1728, 2165, 2616
Ppu21I YACGTR 3 cut(s) 317, 1563, 2068
PpuMI RGGWCCY 1 cut(s) 1549
PscI ACATGT 4 cut(s) 162, 627, 1101, 1752
PshBI ATTAAT 2 cut(s) 1008, 2607
Psp1406I AACGTT 1 cut(s) 2736
Psp5II RGGWCCY 1 cut(s) 1549
Psp6I CCWGG 8 cut(s) 520, 601, 760, 971, 1481, 1771, 2377, 3370
PspCI CACGTG 2 cut(s) 317, 1563
PspEI GGTNACC 1 cut(s) 1628
PspGI CCWGG 8 cut(s) 520, 601, 760, 971, 1481, 1771, 2377, 3370
PspPI GGNCC 9 cut(s) 566, 605, 758, 1549, 1599, 1844, 1924, 2057, 2887
PspPPI RGGWCCY 1 cut(s) 1549
PsrI GAACNNNNNNTAC 2 cut(s) 1403, 1435
PstI CTGCAG 3 cut(s) 2359, 2718, 3055
PstNI CAGNNNCTG 4 cut(s) 827, 1259, 2165, 3234
PsuI RGATCY 1 cut(s) 1463
PsyI GACNNNGTC 1 cut(s) 2132
PvuII CAGCTG 2 cut(s) 59, 827
RsaI GTAC 8 cut(s) 697, 1594, 1751, 1818, 2066, 2394, 2456, 2777
RsaNI GTAC 8 cut(s) 696, 1593, 1750, 1817, 2065, 2393, 2455, 2776
RseI CAYNNNNRTG 5 cut(s) 245, 632, 1100, 1565, 2544
SapI GCTCTTC 1 cut(s) 1236
SaqAI TTAA 9 cut(s) 720, 792, 1008, 1340, 1434, 1502, 2607, 2733, 3096
Sau96I GGNCC 9 cut(s) 566, 605, 758, 1549, 1599, 1844, 1924, 2057, 2887
SchI GAGTC 5 cut(s) 447, 1442, 1728, 2165, 2616
SduI GDGCHC 4 cut(s) 322, 1231, 2041, 2193
SfaNI GCATC 9 cut(s) 387, 484, 763, 913, 1459, 1644, 2401, 2572, 2577
SfcI CTRYAG 5 cut(s) 1017, 1646, 2355, 2714, 3051
SinI GGWCC 7 cut(s) 566, 605, 758, 1549, 1599, 1924, 2057
SmiMI CAYNNNNRTG 5 cut(s) 245, 632, 1100, 1565, 2544
SmlI CTYRAG 2 cut(s) 145, 1658
SmoI CTYRAG 2 cut(s) 145, 1658
SphI GCATGC 1 cut(s) 1206
SsiI CCGC 9 cut(s) 126, 260, 797, 1768, 2092, 2150, 2439, 3378, 3386
SspI AATATT 1 cut(s) 1306
SspMI CTAG 7 cut(s) 111, 1025, 1263, 1668, 2235, 2342, 2894
StyI CCWWGG 2 cut(s) 234, 1812
TaiI ACGT 4 cut(s) 319, 1565, 2070, 2739
TaqI TCGA 8 cut(s) 122, 441, 862, 1863, 2022, 2244, 2620, 2658
TaqII GACCGA 2 cut(s) 1941, 2496
TatI WGTACW 2 cut(s) 1749, 2775
TauI GCSGC 4 cut(s) 799, 1771, 2153, 3389
TfiI GAWTC 7 cut(s) 300, 344, 511, 864, 2306, 2998, 3115
Tru1I TTAA 9 cut(s) 720, 792, 1008, 1340, 1434, 1502, 2607, 2733, 3096
Tru9I TTAA 9 cut(s) 720, 792, 1008, 1340, 1434, 1502, 2607, 2733, 3096
TscAI CASTG 4 cut(s) 1078, 1153, 2017, 3203
TseI GCWGC 9 cut(s) 821, 824, 1259, 2138, 2159, 2269, 2716, 2981, 3353
TspGWI ACGGA 1 cut(s) 1591
TspRI CASTG 4 cut(s) 1078, 1153, 2017, 3203
Tth111I GACNNNGTC 1 cut(s) 2132
Van91I CCANNNNNTGG 1 cut(s) 235
VpaK11BI GGWCC 7 cut(s) 566, 605, 758, 1549, 1599, 1924, 2057
VspI ATTAAT 2 cut(s) 1008, 2607
XagI CCTNNNNNAGG 1 cut(s) 2894
XapI RAATTY 6 cut(s) 104, 659, 1641, 2287, 2363, 2661
XceI RCATGY 5 cut(s) 166, 631, 1105, 1206, 1756
XcmI CCANNNNNNNNNTGG 2 cut(s) 1560, 1810
XmiI GTMKAC 1 cut(s) 2745
XspI CTAG 7 cut(s) 111, 1025, 1263, 1668, 2235, 2342, 2894
Zsp2I ATGCAT 2 cut(s) 718, 2587
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.