Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0008941

Physical Location & Seq

Genomic Coordinates Forward (+)

15892914 .. 15897585

Gene Structure 4672 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g12370.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3387 bp

ATGGCAGCGTCCCTGAATAGAGAGCCATCGAAAAAGGCGATAAAAAGCCCTGGAGGTTCTGGTAGCTCTCAAGGCAAAACTAATTCGAGTGGCCAAACTGTGAAGTTTGCGCGAAGAACTTCGAGTGGACGGTATGTGAGTCTGTCTAGAGAAGACCTTGATATGTCCGGAGAATTATCCGGGGACTATATGGACTACACAGTACAGATTCCTGCCACCCCAGATAACCAGCCCATGGACTCATCCGGGGCTGTGAAGGCGGAGGAGCAATATGTTTCTAACTCTTTATTTACCGGAGGGTTCAATAGTACGACGCGTGCACATCTCATGGATAAGGTGATTGATTCGGAGGTGACTCATCCTCAGATGGCTGGAGCCAAAGGCTCTGCATGTATGATACCTGCTTGTGATGGTAAGGTGATGAAGGATGAGAGAGGAGTTGATATAACCCCCTGTGATTGCAGGTTCAAAATCTGTAGAGATTGCTATTTGGATGCACAGAAGAACACTGGCCTTTGTCCGGGTTGCAAGGAGCAATACAGAGTAGGAGACGAATTTGGTGATCCATCGGGTTACAACAATGGAACGCTGCAATTGCCTGGTGCTGACGGAAAAAGGGATAACATGTCTGCGATGAAGAGGAACCAAACCGGAGAACTTGATCACAATAGGTGGTTGTTTGAGAACAAGGGGACTTATGGTGATGGCAATGCTTTCGATCCCCAAGATGACGGGTATGGTGATGGCGGTGGTGATGGCTTCGGAGGGGGCTTGCTGGATGCGGATGACAAGGCTTGGAAACCCCTCGGCAAGATATTGCCAATTGCTACTGCCATTATCACCCCCTACAGGATACTGATCTTCGTTCGGTTAATCGTGCTAAGTTTGTTCCTGCATTGGAGAGTAGTCAATCCAAACAATGATGCAAGATGGCTGTGGATCATGTCGATTATCTGCGAAATATGGTTCGCCTTCTCTTGGATTCAGATCGATCAGACTCCTAAATTTTTCCCCATTAATCGTCAGACCTATCTTGAAGTCCTCCACGACAAGTTTGACAGGCCATCACCATCCAATCCAACGGGCCGGTCTGACCTCCCTGGCACTGACTTCTTTGTATCTACTGCTCGACACACGATCGATCCTGACAAAGAGCCACCTCTCACCACTGCCAACACCATCCTTTCAATCCTAGCCATTGATTACCCGGTCGAAAAGCTAGCATGCTACGTCTCTGATGATGGAGGTGCCCTCCTCACCTTTGAGGCAATGGCGGAAGCTGCTAGTTTCGCAGACTTGTGGGTTCCCTTCTGCCGGAAACACAACATTGAGCCGAGGAACCCTGACAGTTACTTCGCGTTGAAAGTTGACCCGACAAAGAACAAGAGTAGGCTGGACTTTGTGAAGGATAGGAGGAAGATCAAGAGGGAGTATGATGAGTTCAAGGTGAGGATTAACGGTCTTCCAGTTTCGATCAGGAGGCGGTCTGATGCTTTCCATGCCAGGGAGGAAATGCAGCAGTTGAAACATATGAGGGAGAATGGAATTGACCCTTTGGAGCAAGTCAAAGTCCCCAAGGCTACCTGGATGGCTGATGGCACACATTGGCCTGGTGCTTGGTCTGTTCCTTCCAGTGACCATGCCAAAGGTGACCATTCAGGAATTCTTCAGGTGATGCTGAAGCCTCCTAGTCCTGACCCCCTAATGGGAAGTGCCGATGATGACAAGCTCATAGATTTCACAGATGTCGATATACGCCTCCCAATGTTTGTCTACATGTCGCGAGAAAAGCGGCCTGGCTATGATCACAACAAGAAAGCCGGCGCCATGAATGCGCTGGTGAGAGCATCCGCCATCTTGTCAAACGGCCCTTTCATTCTCAACCTTGACTGTGATCACTACATCTACAACTGCAAAGCTGTCCGTGAAGGCATGTGCTTCATGATGGACAAAGGCGGTGAAAACATCTGCTACATTCAGTTTCCTCAGAGATTCGAAGGCATTGATCCCTCGATCGATCGCTATGCCAATCACAACACCGTGTTTTTCGATGGCAATATGCGTGCACTTGATGGTTTGCAGGGTCCGATGTATGTGGGAACCGGGACCATGTTCCGGCGTTTTGCCTTGTACGGTTTTGATCCACCAAATCCTGATAAGTTGCCGGTGAAGAAGGATGATGAGGCACAAGGAGAGCCTTTGACACAGTCGAATACGCAACCTTTGACAGCCAGTGACTTCGACCCGGATCTTGACACCAATCTACTTCCCAAGCGTTTTGGAAATTCAACAATGCTGGCGGAATCCATACCCGTTGCTGAGTACCAAGGTCGCCCCGTAGCTGATCATCCTTCAGTGAAATTCGGACGGCCTCCTGGAGCTCTCAGAGTTCCTCGTGATCCGCTCAATGCCACTACTGTTGCTGAAGCTGTCTCTGCCATTTCTTGCTGGTACGAGGACAAGACCGAATGGGGAGACCGTGTGGGGTGGATTTACGGGTCAGTGACAGAAGATGTGGTGACTGGGTACAGAATGCACAATCGCGGATGGCGCTCGGTGTACTGCGTTACCAAGCGTGACGCATTTCGCGGTTCAGCTCCCATTAATCTTACTGATCGACTCCACCAAGTGCTCCGTTGGGCAACTGGCTCAGTCGAGATTTTTTTCTCCCGGAACAACGCCTTCCTTGCCTCAATGCGCCTCAAGTTACTACAACGTCTTGCCTACATCAATGTCGGCATCTACCCTTTCACCTCAATCTTTCTCATCGTGTACTGCTTCCTCCCTGCGCTTTCACTCTTCAGTGGACAGTTCATTGTGGCGAATCTCAACATCACATTTTTGGTCTACTTGCTAACCATCACTATATGCCTCATAGCTTTGGCTATCCTGGAGGTGAAATGGTCGGGGATCGCGTTGGAAGAGTGGTGGCGAAATGAGCAGTTTTGGCTGATTTCCGGAACCAGCGCTCACTTGGCTGCTGTGGTGCAAGGCCTTCTAAAAGTGATTGCAGGGATTGAAATTTCCTTTACCTTGACGGCCAAGTCAGCTGGAGAGGACAATGAAGATATATATGCTGACCTCTACCTCGTGAAGTGGACTTCCCTCATGATCCCACCAATTGTGATTGCAATGGTGAACATAATCGCAATCGCAGTCGCGTTTTCGAGGGAGGTTTATGCTCTGAATCCTCAGTGGGCGAGGTTTATTGGCGGTGCCTTCTTCAGCTTTTGGGTTTTGGCTCACTTGTATCCTTTTGCCAAGGGTTTGATGGGAAGAAGAAGGAAGACCCCTACCATTGTGTTTGTTTGGTCGGGTCTCATTGCAATTACACTTTCCTTGCTCTGGGTCGCCATTAACCCGCCCGCCGTTGTTGTCGTTGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000030 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0008150 GO:0008152 GO:0009846 GO:0009856 GO:0009987 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0019187 GO:0022414 GO:0032501 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0051704 GO:0051753 GO:0070085 GO:0071554 GO:0071669 GO:0097502

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-RING_4

Protein Analysis

1129

Amino Acids

125.87

Weight (kDa)

6.33

Isoelectric Point (pI)

38.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008941)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38190
fragaria_vesca	FvH4_2g17120
malus_domestica	MD05G1144100.v1.1 MD05G1144400.v1.1 MD10G1143700.v1.1
prunus_persica	Prupe.8G182500_v2.0.a1
pyrus_communis	pycom05g13840 pycom05g13860 pycom05g13910 pycom05g13940 pycom10g12370
rosa_chinensis	RchiOBHm_Chr6g0281541
rosa_laevigata	RLG00000012965
rosa_multiflora	Rmu_sc0012649.1_g000003
rosa_roxburghii	Rroxscaffold_7G00187020
rosa_rugosa	Rorug06G0141300 Rorug06G0141400
rosa_samantha	Rh6AG253900 Rh6BG256800 Rh6CG256000 Rh6DG248000
rosa_wichuraiana	Rw6G022040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	3043
Acc36I	ACCTGC	2 cut(s)	409, 453
AccB1I	GGYRCC	3 cut(s)	1247, 1823, 3215
AccB7I	CCANNNNNTGG	1 cut(s)	235
AccBSI	CCGCTC	1 cut(s)	2404
AccI	GTMKAC	2 cut(s)	1773, 2847
AccII	CGCG	8 cut(s)	112, 316, 1358, 1783, 2544, 2589, 2915, 3161
AccIII	TCCGGA	2 cut(s)	167, 2957
AcoI	YGGCCR	2 cut(s)	91, 3039
AcsI	RAATTY	6 cut(s)	554, 1004, 1662, 2284, 2360, 3021
AcuI	CTGAAG	6 cut(s)	1652, 1700, 2337, 2445, 2785, 3208
AcyI	GRCGYC	1 cut(s)	1824
AdeI	CACNNNGTG	1 cut(s)	2629
AfaI	GTAC	8 cut(s)	204, 310, 2132, 2324, 2453, 2528, 2561, 2774
AfeI	AGCGCT	1 cut(s)	2968
AflIII	ACRYGT	3 cut(s)	314, 624, 1776
AgsI	TTSAA	9 cut(s)	304, 469, 1037, 1188, 1363, 1444, 1525, 2289, 3020
AjnI	CCWGG	9 cut(s)	49, 598, 1099, 1502, 1583, 1609, 1795, 2374, 2889
Alw21I	GWGCWC	4 cut(s)	322, 2068, 2383, 2634
Alw26I	GTCTC	5 cut(s)	543, 1237, 2437, 2469, 3323
Alw44I	GTGCAC	2 cut(s)	318, 2064
Aor13HI	TCCGGA	2 cut(s)	167, 2957
Aor51HI	AGCGCT	1 cut(s)	2968
ApaLI	GTGCAC	2 cut(s)	318, 2064
ApeKI	GCWGC	5 cut(s)	5, 589, 1280, 1516, 2978
ApoI	RAATTY	6 cut(s)	554, 1004, 1662, 2284, 2360, 3021
ArsI	GACNNNNNNTTYG	2 cut(s)	1337, 1369
AseI	ATTAAT	2 cut(s)	1017, 2604
Asp700I	GAANNNNTTC	1 cut(s)	118
AspLEI	GCGC	7 cut(s)	112, 1826, 1837, 2553, 2700, 2791, 2969
AspS9I	GGNCC	4 cut(s)	1084, 1868, 2084, 2106
AsuC2I	CCSGG	7 cut(s)	181, 247, 522, 1208, 2104, 2246, 2671
AsuII	TTCGAA	1 cut(s)	1995
AsuNHI	GCTAGC	1 cut(s)	1219
AvaII	GGWCC	2 cut(s)	2084, 2106
BaeGI	GKGCMC	3 cut(s)	322, 1252, 2068
BalI	TGGCCA	1 cut(s)	93
BanI	GGYRCC	3 cut(s)	1247, 1823, 3215
BanII	GRGCYC	1 cut(s)	2383
BauI	CACGAG	2 cut(s)	2394, 3089
BbsI	GAAGAC	3 cut(s)	159, 1454, 3293
Bbv12I	GWGCWC	4 cut(s)	322, 2068, 2383, 2634
BbvI	GCAGC	5 cut(s)	17, 576, 1267, 1528, 2965
BceAI	ACGGC	4 cut(s)	1882, 2384, 3054, 3353
BcgI	CGANNNNNNTGC	4 cut(s)	697, 731, 2006, 2040
BciT130I	CCWGG	9 cut(s)	51, 600, 1101, 1504, 1585, 1611, 1797, 2376, 2891
BciVI	GTATCC	2 cut(s)	846, 3261
BclI	TGATCA	4 cut(s)	661, 1804, 1894, 2344
BcnI	CCSGG	7 cut(s)	181, 247, 522, 1208, 2104, 2246, 2671
BcoDI	GTCTC	5 cut(s)	543, 1237, 2437, 2469, 3323
BfaI	CTAG	5 cut(s)	147, 1193, 1220, 1284, 1689
BfmI	CTRYAG	2 cut(s)	475, 847
BfoI	RGCGCY	3 cut(s)	1827, 2554, 2970
BfuAI	ACCTGC	2 cut(s)	409, 453
BfuI	GTATCC	2 cut(s)	846, 3261
BisI	GCNGC	6 cut(s)	6, 590, 1281, 1517, 1793, 2979
BlsI	GCNGC	6 cut(s)	7, 591, 1282, 1518, 1794, 2980
Bme18I	GGWCC	2 cut(s)	2084, 2106
BmgT120I	GGNCC	4 cut(s)	1084, 1868, 2084, 2106
BmrI	ACTGGG	1 cut(s)	2532
BmsI	GCATC	7 cut(s)	484, 769, 913, 1480, 1665, 1856, 2748
BmtI	GCTAGC	1 cut(s)	1223
BmuI	ACTGGG	1 cut(s)	2532
BpiI	GAAGAC	3 cut(s)	159, 1454, 3293
BplI	GAGNNNNNCTC	2 cut(s)	1236, 1268
BpmI	CTGGAG	5 cut(s)	72, 393, 2397, 2912, 3072
Bpu14I	TTCGAA	1 cut(s)	1995
BpuEI	CTTGAG	2 cut(s)	54, 2687
BpuMI	CCSGG	7 cut(s)	181, 247, 522, 1208, 2104, 2246, 2671
Bsa29I	ATCGAT	3 cut(s)	990, 1140, 2016
BsaBI	GATNNNNATC	2 cut(s)	857, 986
BsaHI	GRCGYC	1 cut(s)	1824
BsaI	GGTCTC	2 cut(s)	2469, 3323
BsaWI	WCCGGW	4 cut(s)	167, 293, 650, 2957
BsaXI	ACNNNNNCTCC	2 cut(s)	2466, 2496
Bse118I	RCCGGY	3 cut(s)	1086, 1820, 2164
Bse1I	ACTGG	6 cut(s)	514, 1466, 1632, 2232, 2527, 2650
Bse3DI	GCAATG	4 cut(s)	715, 1275, 3138, 3321
Bse8I	GATNNNNATC	2 cut(s)	857, 986
BseAI	TCCGGA	2 cut(s)	167, 2957
BseBI	CCWGG	9 cut(s)	51, 600, 1101, 1504, 1585, 1611, 1797, 2376, 2891
BseCI	ATCGAT	3 cut(s)	990, 1140, 2016
BseJI	GATNNNNATC	2 cut(s)	857, 986
BseMI	GCAATG	4 cut(s)	715, 1275, 3138, 3321
BseMII	CTCAG	6 cut(s)	377, 2000, 2310, 2398, 2664, 3206
BseNI	ACTGG	6 cut(s)	514, 1466, 1632, 2232, 2527, 2650
BseRI	GAGGAG	3 cut(s)	278, 450, 1244
BseSI	GKGCMC	3 cut(s)	322, 1252, 2068
BseXI	GCAGC	5 cut(s)	17, 576, 1267, 1528, 2965
Bsh1236I	CGCG	8 cut(s)	112, 316, 1358, 1783, 2544, 2589, 2915, 3161
Bsh1285I	CGRYCG	4 cut(s)	1140, 1212, 2016, 2020
BshNI	GGYRCC	3 cut(s)	1247, 1823, 3215
BshVI	ATCGAT	3 cut(s)	990, 1140, 2016
BsiEI	CGRYCG	4 cut(s)	1140, 1212, 2016, 2020
BsiHKAI	GWGCWC	4 cut(s)	322, 2068, 2383, 2634
BslFI	GGGAC	4 cut(s)	197, 706, 1556, 2119
BsmAI	GTCTC	5 cut(s)	543, 1237, 2437, 2469, 3323
BsmBI	CGTCTC	2 cut(s)	543, 1237
BsmFI	GGGAC	4 cut(s)	197, 706, 1556, 2119
BsmI	GAATGC	2 cut(s)	1837, 2538
Bso31I	GGTCTC	2 cut(s)	2469, 3323
Bsp119I	TTCGAA	1 cut(s)	1995
Bsp1286I	GDGCHC	5 cut(s)	322, 1252, 2068, 2383, 2634
Bsp13I	TCCGGA	2 cut(s)	167, 2957
Bsp19I	CCATGG	1 cut(s)	234
Bsp68I	TCGCGA	1 cut(s)	1783
BspCNI	CTCAG	6 cut(s)	376, 1999, 2311, 2397, 2663, 3205
BspDI	ATCGAT	3 cut(s)	990, 1140, 2016
BspEI	TCCGGA	2 cut(s)	167, 2957
BspFNI	CGCG	8 cut(s)	112, 316, 1358, 1783, 2544, 2589, 2915, 3161
BspHI	TCATGA	2 cut(s)	1941, 3108
BspMI	ACCTGC	2 cut(s)	409, 453
BspOI	GCTAGC	1 cut(s)	1223
BspT104I	TTCGAA	1 cut(s)	1995
BspT107I	GGYRCC	3 cut(s)	1247, 1823, 3215
BspTNI	GGTCTC	2 cut(s)	2469, 3323
BsrBI	CCGCTC	1 cut(s)	2404
BsrDI	GCAATG	4 cut(s)	715, 1275, 3138, 3321
BsrFI	RCCGGY	3 cut(s)	1086, 1820, 2164
BsrI	ACTGG	6 cut(s)	514, 1466, 1632, 2232, 2527, 2650
BssAI	RCCGGY	3 cut(s)	1086, 1820, 2164
BssNI	GRCGYC	1 cut(s)	1824
BssSI	CACGAG	2 cut(s)	2394, 3089
BssT1I	CCWWGG	4 cut(s)	234, 1575, 2326, 3261
Bst2BI	CACGAG	2 cut(s)	2394, 3089
Bst2UI	CCWGG	9 cut(s)	51, 600, 1101, 1504, 1585, 1611, 1797, 2376, 2891
Bst6I	CTCTTC	3 cut(s)	632, 2804, 2916
BstACI	GRCGYC	1 cut(s)	1824
BstBI	TTCGAA	1 cut(s)	1995
BstC8I	GCNNGC	8 cut(s)	318, 773, 1221, 1225, 1822, 2064, 2298, 3366
BstDEI	CTNAG	7 cut(s)	363, 881, 1986, 2319, 2384, 2650, 3192
BstDSI	CCRYGG	1 cut(s)	234
BstEII	GGTNACC	1 cut(s)	1649
BstFNI	CGCG	8 cut(s)	112, 316, 1358, 1783, 2544, 2589, 2915, 3161
BstH2I	RGCGCY	3 cut(s)	1827, 2554, 2970
BstHHI	GCGC	7 cut(s)	112, 1826, 1837, 2553, 2700, 2791, 2969
BstMAI	GTCTC	5 cut(s)	543, 1237, 2437, 2469, 3323
BstMCI	CGRYCG	4 cut(s)	1140, 1212, 2016, 2020
BstNI	CCWGG	9 cut(s)	51, 600, 1101, 1504, 1585, 1611, 1797, 2376, 2891
BstNSI	RCATGY	5 cut(s)	393, 628, 1227, 1780, 1936
BstPI	GGTNACC	1 cut(s)	1649
BstSFI	CTRYAG	2 cut(s)	475, 847
BstSLI	GKGCMC	3 cut(s)	322, 1252, 2068
BstUI	CGCG	8 cut(s)	112, 316, 1358, 1783, 2544, 2589, 2915, 3161
BstV1I	GCAGC	5 cut(s)	17, 576, 1267, 1528, 2965
BstV2I	GAAGAC	3 cut(s)	159, 1454, 3293
BstX2I	RGATCY	1 cut(s)	2248
BstYI	RGATCY	1 cut(s)	2248
Bsu15I	ATCGAT	3 cut(s)	990, 1140, 2016
BsuI	GTATCC	2 cut(s)	846, 3261
BsuTUI	ATCGAT	3 cut(s)	990, 1140, 2016
BtgI	CCRYGG	1 cut(s)	234
BtgZI	GCGATG	1 cut(s)	647
BtsI	GCAGTG	1 cut(s)	1167
BtsIMutI	CAGTG	9 cut(s)	507, 1104, 1167, 1639, 2239, 2361, 2508, 2809, 3200
BtuMI	TCGCGA	1 cut(s)	1783
BveI	ACCTGC	2 cut(s)	409, 453
Cac8I	GCNNGC	8 cut(s)	318, 773, 1221, 1225, 1822, 2064, 2298, 3366
CciI	TCATGA	2 cut(s)	1941, 3108
CfoI	GCGC	7 cut(s)	112, 1826, 1837, 2553, 2700, 2791, 2969
Cfr10I	RCCGGY	3 cut(s)	1086, 1820, 2164
Cfr13I	GGNCC	4 cut(s)	1084, 1868, 2084, 2106
ClaI	ATCGAT	3 cut(s)	990, 1140, 2016
CseI	GACGC	2 cut(s)	322, 2588
Csp6I	GTAC	8 cut(s)	203, 309, 2131, 2323, 2452, 2527, 2560, 2773
CspCI	CAANNNNNGTGG	2 cut(s)	2401, 2436
CviQI	GTAC	8 cut(s)	203, 309, 2131, 2323, 2452, 2527, 2560, 2773
DdeI	CTNAG	7 cut(s)	363, 881, 1986, 2319, 2384, 2650, 3192
DinI	GGCGCC	1 cut(s)	1825
DraIII	CACNNNGTG	1 cut(s)	2629
DrdI	GACNNNNNNGTC	1 cut(s)	3043
DseDI	GACNNNNNNGTC	1 cut(s)	3043
EaeI	YGGCCR	2 cut(s)	91, 3039
Eam1104I	CTCTTC	3 cut(s)	632, 2804, 2916
EarI	CTCTTC	3 cut(s)	632, 2804, 2916
EciI	GGCGGA	4 cut(s)	275, 1289, 1840, 2315
Ecl136II	GAGCTC	1 cut(s)	2381
Eco130I	CCWWGG	4 cut(s)	234, 1575, 2326, 3261
Eco147I	AGGCCT	1 cut(s)	2994
Eco24I	GRGCYC	1 cut(s)	2383
Eco31I	GGTCTC	2 cut(s)	2469, 3323
Eco47I	GGWCC	2 cut(s)	2084, 2106
Eco47III	AGCGCT	1 cut(s)	2968
Eco53kI	GAGCTC	1 cut(s)	2381
Eco57I	CTGAAG	6 cut(s)	1652, 1700, 2337, 2445, 2785, 3208
Eco91I	GGTNACC	1 cut(s)	1649
EcoICRI	GAGCTC	1 cut(s)	2381
EcoO65I	GGTNACC	1 cut(s)	1649
EcoRI	GAATTC	1 cut(s)	1662
EcoRII	CCWGG	9 cut(s)	49, 598, 1099, 1502, 1583, 1609, 1795, 2374, 2889
EcoT14I	CCWWGG	4 cut(s)	234, 1575, 2326, 3261
EcoT38I	GRGCYC	1 cut(s)	2383
EgeI	GGCGCC	1 cut(s)	1825
EheI	GGCGCC	1 cut(s)	1825
ErhI	CCWWGG	4 cut(s)	234, 1575, 2326, 3261
Esp3I	CGTCTC	2 cut(s)	543, 1237
FaqI	GGGAC	4 cut(s)	197, 706, 1556, 2119
FauI	CCCGC	2 cut(s)	3369, 3373
FauNDI	CATATG	1 cut(s)	1530
FbaI	TGATCA	4 cut(s)	661, 1804, 1894, 2344
FblI	GTMKAC	2 cut(s)	1773, 2847
Fnu4HI	GCNGC	6 cut(s)	6, 590, 1281, 1517, 1793, 2979
FriOI	GRGCYC	1 cut(s)	2383
Fsp4HI	GCNGC	6 cut(s)	6, 590, 1281, 1517, 1793, 2979
FspBI	CTAG	5 cut(s)	147, 1193, 1220, 1284, 1689
GlaI	GCGC	7 cut(s)	111, 1825, 1836, 2552, 2699, 2790, 2968
GluI	GCNGC	6 cut(s)	6, 590, 1281, 1517, 1793, 2979
GsuI	CTGGAG	5 cut(s)	72, 393, 2397, 2912, 3072
HaeII	RGCGCY	3 cut(s)	1827, 2554, 2970
HgaI	GACGC	2 cut(s)	322, 2588
HhaI	GCGC	7 cut(s)	112, 1826, 1837, 2553, 2700, 2791, 2969
Hin1I	GRCGYC	1 cut(s)	1824
Hin6I	GCGC	7 cut(s)	110, 1824, 1835, 2551, 2698, 2789, 2967
HinP1I	GCGC	7 cut(s)	110, 1824, 1835, 2551, 2698, 2789, 2967
HincII	GTYRAC	1 cut(s)	1369
HindII	GTYRAC	1 cut(s)	1369
Hpy99I	CGWCG	1 cut(s)	316
HpyCH4IV	ACGT	2 cut(s)	1230, 2716
HpyF3I	CTNAG	7 cut(s)	363, 881, 1986, 2319, 2384, 2650, 3192
HpySE526I	ACGT	2 cut(s)	1230, 2716
Hsp92I	GRCGYC	1 cut(s)	1824
HspAI	GCGC	7 cut(s)	110, 1824, 1835, 2551, 2698, 2789, 2967
KasI	GGCGCC	1 cut(s)	1823
Kpn2I	TCCGGA	2 cut(s)	167, 2957
KroI	GCCGGC	1 cut(s)	1820
KroNI	GCCGGC	1 cut(s)	1822
Ksp22I	TGATCA	4 cut(s)	661, 1804, 1894, 2344
LmnI	GCTCC	7 cut(s)	265, 374, 532, 1558, 2378, 2602, 2637
Lsp1109I	GCAGC	5 cut(s)	17, 576, 1267, 1528, 2965
LweI	GCATC	7 cut(s)	484, 769, 913, 1480, 1665, 1856, 2748
MaeI	CTAG	5 cut(s)	147, 1193, 1220, 1284, 1689
MaeII	ACGT	2 cut(s)	1230, 2716
MbiI	CCGCTC	1 cut(s)	2404
MfeI	CAATTG	3 cut(s)	593, 822, 3120
MflI	RGATCY	1 cut(s)	2248
MhlI	GDGCHC	5 cut(s)	322, 1252, 2068, 2383, 2634
MlsI	TGGCCA	1 cut(s)	93
MluI	ACGCGT	1 cut(s)	314
MluNI	TGGCCA	1 cut(s)	93
Mly113I	GGCGCC	1 cut(s)	1824
MlyI	GAGTC	5 cut(s)	148, 233, 349, 991, 2613
MmeI	TCCRAC	2 cut(s)	1103, 2898
Mox20I	TGGCCA	1 cut(s)	93
MroI	TCCGGA	2 cut(s)	167, 2957
MroNI	GCCGGC	1 cut(s)	1820
MroXI	GAANNNNTTC	1 cut(s)	118
MscI	TGGCCA	1 cut(s)	93
MseI	TTAA	6 cut(s)	872, 1017, 1455, 2604, 3357, 3385
Msp20I	TGGCCA	1 cut(s)	93
MspA1I	CMGCKG	1 cut(s)	3050
MunI	CAATTG	3 cut(s)	593, 822, 3120
Mva1269I	GAATGC	2 cut(s)	1837, 2538
MvaI	CCWGG	9 cut(s)	51, 600, 1101, 1504, 1585, 1611, 1797, 2376, 2891
MvnI	CGCG	8 cut(s)	112, 316, 1358, 1783, 2544, 2589, 2915, 3161
NaeI	GCCGGC	1 cut(s)	1822
NarI	GGCGCC	1 cut(s)	1824
NciI	CCSGG	7 cut(s)	181, 247, 522, 1208, 2104, 2246, 2671
NcoI	CCATGG	1 cut(s)	234
NdeI	CATATG	1 cut(s)	1530
NgoMIV	GCCGGC	1 cut(s)	1820
NheI	GCTAGC	1 cut(s)	1219
NmeAIII	GCCGAG	2 cut(s)	786, 1359
NmuCI	GTSAC	7 cut(s)	352, 1634, 1649, 2234, 2503, 2518, 2576
NruI	TCGCGA	1 cut(s)	1783
NspI	RCATGY	5 cut(s)	393, 628, 1227, 1780, 1936
NspV	TTCGAA	1 cut(s)	1995
PaeI	GCATGC	1 cut(s)	1227
PagI	TCATGA	2 cut(s)	1941, 3108
PceI	AGGCCT	1 cut(s)	2994
PciI	ACATGT	2 cut(s)	624, 1776
PcsI	WCGNNNNNNNCGW	2 cut(s)	35, 2912
PctI	GAATGC	2 cut(s)	1837, 2538
PdiI	GCCGGC	1 cut(s)	1822
PdmI	GAANNNNTTC	1 cut(s)	118
PfeI	GAWTC	7 cut(s)	208, 344, 982, 1992, 2303, 2824, 3187
PflFI	GACNNNGTC	1 cut(s)	2206
PflMI	CCANNNNNTGG	1 cut(s)	235
PfoI	TCCNGGA	3 cut(s)	2374, 2669, 2889
PkrI	GCNGC	6 cut(s)	7, 591, 1282, 1518, 1794, 2980
Ple19I	CGATCG	3 cut(s)	1140, 2016, 2020
PleI	GAGTC	5 cut(s)	147, 233, 349, 991, 2613
PluTI	GGCGCC	1 cut(s)	1827
PpsI	GAGTC	5 cut(s)	147, 233, 349, 991, 2613
PscI	ACATGT	2 cut(s)	624, 1776
PshBI	ATTAAT	2 cut(s)	1017, 2604
Psp124BI	GAGCTC	1 cut(s)	2383
Psp6I	CCWGG	9 cut(s)	49, 598, 1099, 1502, 1583, 1609, 1795, 2374, 2889
PspEI	GGTNACC	1 cut(s)	1649
PspGI	CCWGG	9 cut(s)	49, 598, 1099, 1502, 1583, 1609, 1795, 2374, 2889
PspPI	GGNCC	4 cut(s)	1084, 1868, 2084, 2106
PsrI	GAACNNNNNNTAC	2 cut(s)	1424, 1456
PsuI	RGATCY	1 cut(s)	2248
PsyI	GACNNNGTC	1 cut(s)	2206
PvuI	CGATCG	3 cut(s)	1140, 2016, 2020
PvuII	CAGCTG	1 cut(s)	3050
RruI	TCGCGA	1 cut(s)	1783
RsaI	GTAC	8 cut(s)	204, 310, 2132, 2324, 2453, 2528, 2561, 2774
RsaNI	GTAC	8 cut(s)	203, 309, 2131, 2323, 2452, 2527, 2560, 2773
SacI	GAGCTC	1 cut(s)	2383
SaqAI	TTAA	6 cut(s)	872, 1017, 1455, 2604, 3357, 3385
SatI	GCNGC	6 cut(s)	6, 590, 1281, 1517, 1793, 2979
Sau96I	GGNCC	4 cut(s)	1084, 1868, 2084, 2106
SchI	GAGTC	5 cut(s)	148, 233, 349, 991, 2613
SduI	GDGCHC	5 cut(s)	322, 1252, 2068, 2383, 2634
SfaNI	GCATC	7 cut(s)	484, 769, 913, 1480, 1665, 1856, 2748
SfcI	CTRYAG	2 cut(s)	475, 847
SfoI	GGCGCC	1 cut(s)	1825
SfuI	TTCGAA	1 cut(s)	1995
SinI	GGWCC	2 cut(s)	2084, 2106
SmlI	CTYRAG	2 cut(s)	69, 2702
SmoI	CTYRAG	2 cut(s)	69, 2702
SphI	GCATGC	1 cut(s)	1227
SseBI	AGGCCT	1 cut(s)	2994
SspDI	GGCGCC	1 cut(s)	1823
SspMI	CTAG	5 cut(s)	147, 1193, 1220, 1284, 1689
SstI	GAGCTC	1 cut(s)	2383
StuI	AGGCCT	1 cut(s)	2994
StyI	CCWWGG	4 cut(s)	234, 1575, 2326, 3261
TaiI	ACGT	2 cut(s)	1233, 2719
TaqII	GACCGA	1 cut(s)	2480
TatI	WGTACW	3 cut(s)	202, 2559, 2772
TauI	GCSGC	1 cut(s)	1795
TfiI	GAWTC	7 cut(s)	208, 344, 982, 1992, 2303, 2824, 3187
Tru1I	TTAA	6 cut(s)	872, 1017, 1455, 2604, 3357, 3385
Tru9I	TTAA	6 cut(s)	872, 1017, 1455, 2604, 3357, 3385
TscAI	CASTG	9 cut(s)	514, 1111, 1174, 1639, 2239, 2361, 2508, 2809, 3200
TseFI	GTSAC	7 cut(s)	352, 1634, 1649, 2234, 2503, 2518, 2576
TseI	GCWGC	5 cut(s)	5, 589, 1280, 1516, 2978
Tsp45I	GTSAC	7 cut(s)	352, 1634, 1649, 2234, 2503, 2518, 2576
TspDTI	ATGAA	7 cut(s)	437, 650, 1844, 1864, 1930, 2803, 3078
TspGWI	ACGGA	3 cut(s)	624, 1913, 2624
TspRI	CASTG	9 cut(s)	514, 1111, 1174, 1639, 2239, 2361, 2508, 2809, 3200
Tth111I	GACNNNGTC	1 cut(s)	2206
Van91I	CCANNNNNTGG	1 cut(s)	235
VneI	GTGCAC	2 cut(s)	318, 2064
VpaK11BI	GGWCC	2 cut(s)	2084, 2106
VspI	ATTAAT	2 cut(s)	1017, 2604
XapI	RAATTY	6 cut(s)	554, 1004, 1662, 2284, 2360, 3021
XbaI	TCTAGA	1 cut(s)	146
XceI	RCATGY	5 cut(s)	393, 628, 1227, 1780, 1936
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1834, 2971, 3268
XmiI	GTMKAC	2 cut(s)	1773, 2847
XmnI	GAANNNNTTC	1 cut(s)	118
XspI	CTAG	5 cut(s)	147, 1193, 1220, 1284, 1689

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.