Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0008941

Physical Location & Seq

Genomic Coordinates Forward (+)

42765043 .. 42771518

Gene Structure 6476 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG256000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2484 bp

ATGGCGTCCTTGAACAACCAGCCATCCAAGAAGGCAATACGCACCCCCGGAGGTTCAGCTGGTAGCTCTCAGGGTAAGGCTAATTCAAGTGGCCAAACTGTGAAATTCGCTAGACGAACTTCGAGCGGAAGGTATGTCAGTCTCTCAAGAGAAGACCTTGACATGTCAGGGGAATTGTCAGGGGACTACATGAACTACACAGTTCATATTCCTCCCACCCCGGATAACCAACCCATGGACACTTCTGTGGCTGTCAAGGCGGAGGAGCAATATGTTTCTAACTCACTCTTCACCGGGGGATTCAACAGCGTGACACGTGCTCATTTGATGGACAAGGTAATTGATTCCGAGGTGACACATCCACAGATGGCCGGAGCCAAAGGTTCGGCGTGCATGATGCCTGCTTGTGACGGTAAGGTGATGAAGGACGAGAGGGGAGTCGATATAACTCCTTGTGATTGCAGGTTCAAAATATGTAGAGATTGCTATATGGATGCACAGAAGGATACAAATCTTTGTCCTGGTTGCAAGGAGCCATACCGAATGGGGGACTTAGATGATGATGGACCAGATTATGAGCGTGGAGGAGCATTGCAATTGCCTGGACCAGATGGAAATAGGGATAACATGTCAATGATGAAGAGGAACCAAACAGGTGAATTTGATCACAACAGGTGGTTGTTTGAGACAAGGGGTACCTATGGTGTTGGTAATGCATTTAATCCCCCAGAGGACGGTGGTTATGATGAAGGGTTCGGACCAGGATCAATGGATGCTACCGAAAAGGCTTTTAAGCCGCTAAGTAGGAAGATACCAATTGCAGCAGCTGTTATCAGCCCTTACAGGTTACTGATCTTTATTCGATTCATAGTGTTGTGTTTCTTCTTGCATTGGAGAGTAGTGCATCCAAACAATGACGCAAGATGGTTGTGGATGATGTCAATTGTTTGTGAGCTGTGGTTTGCCTTCTCCTGGATTTTGGATCAAACTCCAAAGTTCTTCCCTATTAATCGTGCTACAGACCTAGAAGTCCTATATGAAAAGTTTGATATGCCATCTCCTTCCAATCCCACTGGTCGCTCAGACCTCCCCGGCATTGACATGTTTGTCTCTACTGCTGATCCTGACAAGGAGCCACCTCTTACCACTGCTAACACCATTCTTTCAATCTTGGCTGTTGATTACCCGGTGGAGAAGATTGCATGCTACATCTCCGATGATGGAGGTGCTCTTCTTACTTTTGAGGCAATGGCAGAGGCTGCTAGTTTTGCAGATTTGTGGGTGCCATTCTGCAAGAAACACAATATTGAACCAAGAAATCCTGATAGTTACTTCGCCTTAAAAGTTGACCCTACCAAGAACAAGAGCAGGACTGACTTTGTGAAGGATAGAAGGAAGATCAAAAGGGAGTATGATGAGTTCAAGGTAAGGATTAACGGGCTTCCTGACTCTATTAGGAGAAGATCTGATGCCTTCCATGCCAGGGAGGAAATGAAAATGTTAAAGCACATGAGGGAGACCGGTGCTGACCCTTTGGAGCAAGTCAAGGTCCCAAAGGCCACGTGGATGGCTGATGGCACACATTGGCCGGGTACTTGGTCCGTCCCTTCAAGTGACCATGCGAAGGGTGACCATTCAGGAATTCTACAGGTGATGCTCAAGCCTCCTAGCCCTGATCCACTAATGGGAGGGGCAGATGACAAGCTCTTAGATTTCACAGATGTTGATATACGACTCCCAATGTTTGTGTACATGTCAAGAGAGAAGCGGCCAGGCTATGATCACAACAAGAAAGCCGGTGCCATGAATGCCTTGGTACGAACTTCAGCCATCTTGTCCAATGGGCCATTCATCCTCAACCTCGACTGTGACCACTACATCTACAACTGCAAGGCCATCCGAGAAGGAATGTGCTTCATGATGGACCGAGGAGGAGAAGGTATCTGCTACATTCAGTTCCCTCAGAGATTTGAAGGCATTGATCCCTCGGATCGTTATGCCAACCATAACACTGTGTTTTTCGATGGCAATATGCGTGCTCTTGATGGTCTTCAAGGTCCAATGTACGTGGGAACTGGGACAATGTTTAGGCGGTTTGCCCTTTATGGTTTTGACCCTCCAAATCCTGACAAGGTCGCAGCACAGAAGGCGGCAACAGCAGCTACTGGTGACTCAGAGACACAAAAAGAGCCCTTGACGGCACCTCCTGCACAGACCACACAGCCCTTGACAGCTAGTGAACTCGACCCTGATCTTGATACCAATCTGCTGCCTAAGCGTTTTGGAAATTCTACCATGTTAGCTGAATCCATACCTGTTGCTGAGTATCAAGGACGCCCCCTAGCTGATCATCCTGCAGTCAAATTCGGACGCCCTCCTGGTATTCTTAGGGTACCTCGTGATCCACTTGATGCTACAACTGTTGCTGAAGCTGTCTCCGCCATTTCTTGCTGGTCAATTAACAACCTATCTTATCGAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000030 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0008150 GO:0008152 GO:0009846 GO:0009856 GO:0009987 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0019187 GO:0022414 GO:0032501 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0051704 GO:0051753 GO:0070085 GO:0071554 GO:0071669 GO:0097502

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-RING_4

Protein Analysis

827

Amino Acids

92.0

Weight (kDa)

5.71

Isoelectric Point (pI)

41.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_4	PF14570	133 - 181	4.1e-15	RING/Ubox like zinc-binding domain
Cellulose_synt	PF03552	366 - 819	9.7e-182	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008941)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38190
fragaria_vesca	FvH4_2g17120
malus_domestica	MD05G1144100.v1.1 MD05G1144400.v1.1 MD10G1143700.v1.1
prunus_persica	Prupe.8G182500_v2.0.a1
pyrus_communis	pycom05g13840 pycom05g13860 pycom05g13910 pycom05g13940 pycom10g12370
rosa_chinensis	RchiOBHm_Chr6g0281541
rosa_laevigata	RLG00000012965
rosa_multiflora	Rmu_sc0012649.1_g000003
rosa_roxburghii	Rroxscaffold_7G00187020
rosa_rugosa	Rorug06G0141300 Rorug06G0141400
rosa_samantha	Rh6AG253900 Rh6BG256800 Rh6CG256000 Rh6DG248000
rosa_wichuraiana	Rw6G022040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1028, 1106
Acc36I	ACCTGC	1 cut(s)	453
Acc65I	GGTACC	2 cut(s)	695, 2392
AccB1I	GGYRCC	5 cut(s)	695, 1282, 1799, 2200, 2392
AccB7I	CCANNNNNTGG	1 cut(s)	235
AccBSI	CCGCTC	1 cut(s)	126
AciI	CCGC	7 cut(s)	126, 260, 797, 1768, 2092, 2150, 2439
AclWI	GGATC	7 cut(s)	772, 990, 1115, 1670, 1976, 1998, 2396
AcoI	YGGCCR	4 cut(s)	91, 369, 1586, 1769
AcsI	RAATTY	5 cut(s)	104, 659, 1641, 2287, 2363
AcuI	CTGAAG	2 cut(s)	1809, 2448
AcvI	CACGTG	2 cut(s)	317, 1563
AcyI	GRCGYC	3 cut(s)	5, 2335, 2371
AfaI	GTAC	6 cut(s)	697, 1594, 1751, 1818, 2066, 2394
AfiI	CCNNNNNNNGG	7 cut(s)	235, 547, 734, 972, 1483, 1624, 1685
AflIII	ACRYGT	5 cut(s)	162, 314, 627, 1101, 1752
AgeI	ACCGGT	1 cut(s)	1520
AjnI	CCWGG	7 cut(s)	520, 601, 760, 971, 1481, 1771, 2377
AjuI	GAANNNNNNNTTGG	2 cut(s)	1832, 1864
AleI	CACNNNNGTG	1 cut(s)	245
Alw21I	GWGCWC	3 cut(s)	322, 1231, 2041
Alw26I	GTCTC	6 cut(s)	146, 680, 1114, 1511, 2171, 2440
AlwI	GGATC	7 cut(s)	772, 990, 1115, 1670, 1976, 1998, 2396
AlwNI	CAGNNNCTG	3 cut(s)	827, 1259, 2165
AoxI	GGCC	7 cut(s)	91, 369, 1557, 1586, 1769, 1844, 1893
ApeKI	GCWGC	6 cut(s)	821, 824, 1259, 2138, 2159, 2269
ApoI	RAATTY	5 cut(s)	104, 659, 1641, 2287, 2363
AseI	ATTAAT	1 cut(s)	1008
AsiGI	ACCGGT	1 cut(s)	1520
Asp718I	GGTACC	2 cut(s)	695, 2392
AspS9I	GGNCC	8 cut(s)	566, 605, 758, 1549, 1599, 1844, 1924, 2057
AsuC2I	CCSGG	6 cut(s)	48, 221, 295, 1092, 1187, 1590
AsuHPI	GGTGA	7 cut(s)	283, 364, 430, 668, 1640, 1663, 2180
AvaII	GGWCC	7 cut(s)	566, 605, 758, 1549, 1599, 1924, 2057
BalI	TGGCCA	1 cut(s)	93
BanI	GGYRCC	5 cut(s)	695, 1282, 1799, 2200, 2392
BanII	GRGCYC	1 cut(s)	2193
BauI	CACGAG	1 cut(s)	2397
BbrPI	CACGTG	2 cut(s)	317, 1563
BbsI	GAAGAC	2 cut(s)	159, 2042
Bbv12I	GWGCWC	3 cut(s)	322, 1231, 2041
BbvI	GCAGC	6 cut(s)	833, 836, 1246, 2150, 2171, 2256
BceAI	ACGGC	1 cut(s)	2214
BciT130I	CCWGG	7 cut(s)	522, 603, 762, 973, 1483, 1773, 2379
BciVI	GTATCC	1 cut(s)	499
BclI	TGATCA	3 cut(s)	664, 1780, 2347
BcnI	CCSGG	6 cut(s)	48, 221, 295, 1092, 1187, 1590
BcoDI	GTCTC	6 cut(s)	146, 680, 1114, 1511, 2171, 2440
BfaI	CTAG	6 cut(s)	111, 1025, 1263, 1668, 2235, 2342
BfmI	CTRYAG	3 cut(s)	1017, 1646, 2355
BfuAI	ACCTGC	1 cut(s)	453
BfuI	GTATCC	1 cut(s)	499
BglII	AGATCT	1 cut(s)	1463
BisI	GCNGC	9 cut(s)	797, 822, 825, 1260, 1769, 2139, 2151, 2160, 2270
BlsI	GCNGC	9 cut(s)	798, 823, 826, 1261, 1770, 2140, 2152, 2161, 2271
Bme18I	GGWCC	7 cut(s)	566, 605, 758, 1549, 1599, 1924, 2057
BmgT120I	GGNCC	8 cut(s)	566, 605, 758, 1549, 1599, 1844, 1924, 2057
BmrI	ACTGGG	1 cut(s)	2085
BmsI	GCATC	7 cut(s)	387, 484, 763, 913, 1459, 1644, 2401
BmuI	ACTGGG	1 cut(s)	2085
BpiI	GAAGAC	2 cut(s)	159, 2042
Bpu10I	CCTNAGC	1 cut(s)	2274
BpuEI	CTTGAG	2 cut(s)	130, 1643
BpuMI	CCSGG	6 cut(s)	48, 221, 295, 1092, 1187, 1590
BsaAI	YACGTR	3 cut(s)	317, 1563, 2068
BsaBI	GATNNNNATC	2 cut(s)	510, 2262
BsaHI	GRCGYC	3 cut(s)	5, 2335, 2371
BsaI	GGTCTC	1 cut(s)	1511
BsaWI	WCCGGW	1 cut(s)	1520
BsaXI	ACNNNNNCTCC	2 cut(s)	2188, 2218
Bsc4I	CCNNNNNNNGG	7 cut(s)	235, 547, 734, 972, 1483, 1624, 1685
Bse118I	RCCGGY	2 cut(s)	1520, 1796
Bse1I	ACTGG	3 cut(s)	1078, 2080, 2170
Bse3DI	GCAATG	2 cut(s)	590, 1254
Bse8I	GATNNNNATC	2 cut(s)	510, 2262
BseBI	CCWGG	7 cut(s)	522, 603, 762, 973, 1483, 1773, 2379
BseJI	GATNNNNATC	2 cut(s)	510, 2262
BseLI	CCNNNNNNNGG	7 cut(s)	235, 547, 734, 972, 1483, 1624, 1685
BseMI	GCAATG	2 cut(s)	590, 1254
BseMII	CTCAG	5 cut(s)	83, 1095, 1976, 2187, 2313
BseNI	ACTGG	3 cut(s)	1078, 2080, 2170
BseRI	GAGGAG	4 cut(s)	278, 600, 1944, 1947
BseXI	GCAGC	6 cut(s)	833, 836, 1246, 2150, 2171, 2256
BsgI	GTGCAG	1 cut(s)	2193
BshFI	GGCC	7 cut(s)	93, 371, 1559, 1588, 1771, 1846, 1895
BshNI	GGYRCC	5 cut(s)	695, 1282, 1799, 2200, 2392
BshTI	ACCGGT	1 cut(s)	1520
BsiHKAI	GWGCWC	3 cut(s)	322, 1231, 2041
BsiSI	CCGG	9 cut(s)	48, 221, 294, 372, 1092, 1187, 1521, 1589, 1797
BslFI	GGGAC	5 cut(s)	197, 563, 1535, 1589, 2092
BslI	CCNNNNNNNGG	7 cut(s)	235, 547, 734, 972, 1483, 1624, 1685
BsmAI	GTCTC	6 cut(s)	146, 680, 1114, 1511, 2171, 2440
BsmFI	GGGAC	5 cut(s)	197, 563, 1535, 1589, 2092
BsmI	GAATGC	1 cut(s)	1813
BsnI	GGCC	7 cut(s)	93, 371, 1559, 1588, 1771, 1846, 1895
Bso31I	GGTCTC	1 cut(s)	1511
Bsp1286I	GDGCHC	4 cut(s)	322, 1231, 2041, 2193
Bsp1407I	TGTACA	1 cut(s)	1749
Bsp19I	CCATGG	1 cut(s)	234
BspACI	CCGC	7 cut(s)	126, 260, 797, 1768, 2092, 2150, 2439
BspANI	GGCC	7 cut(s)	93, 371, 1559, 1588, 1771, 1846, 1895
BspCNI	CTCAG	5 cut(s)	82, 1094, 1975, 2186, 2314
BspHI	TCATGA	1 cut(s)	1917
BspMAI	CTGCAG	1 cut(s)	2359
BspMI	ACCTGC	1 cut(s)	453
BspPI	GGATC	7 cut(s)	772, 990, 1115, 1670, 1976, 1998, 2396
BspQI	GCTCTTC	1 cut(s)	1236
BspT107I	GGYRCC	5 cut(s)	695, 1282, 1799, 2200, 2392
BspTNI	GGTCTC	1 cut(s)	1511
BsrBI	CCGCTC	1 cut(s)	126
BsrDI	GCAATG	2 cut(s)	590, 1254
BsrFI	RCCGGY	2 cut(s)	1520, 1796
BsrGI	TGTACA	1 cut(s)	1749
BsrI	ACTGG	3 cut(s)	1078, 2080, 2170
BssAI	RCCGGY	2 cut(s)	1520, 1796
BssNI	GRCGYC	3 cut(s)	5, 2335, 2371
BssSI	CACGAG	1 cut(s)	2397
BssT1I	CCWWGG	2 cut(s)	234, 1812
Bst2BI	CACGAG	1 cut(s)	2397
Bst2UI	CCWGG	7 cut(s)	522, 603, 762, 973, 1483, 1773, 2379
Bst4CI	ACNGT	7 cut(s)	100, 202, 413, 737, 1868, 2014, 2422
Bst6I	CTCTTC	3 cut(s)	293, 635, 1236
BstACI	GRCGYC	3 cut(s)	5, 2335, 2371
BstAPI	GCANNNNNTGC	2 cut(s)	1259, 2207
BstAUI	TGTACA	1 cut(s)	1749
BstBAI	YACGTR	3 cut(s)	317, 1563, 2068
BstC8I	GCNNGC	4 cut(s)	391, 402, 1204, 2037
BstDSI	CCRYGG	1 cut(s)	234
BstEII	GGTNACC	1 cut(s)	1628
BstMAI	GTCTC	6 cut(s)	146, 680, 1114, 1511, 2171, 2440
BstNI	CCWGG	7 cut(s)	522, 603, 762, 973, 1483, 1773, 2379
BstNSI	RCATGY	5 cut(s)	166, 631, 1105, 1206, 1756
BstPI	GGTNACC	1 cut(s)	1628
BstSFI	CTRYAG	3 cut(s)	1017, 1646, 2355
BstV1I	GCAGC	6 cut(s)	833, 836, 1246, 2150, 2171, 2256
BstV2I	GAAGAC	2 cut(s)	159, 2042
BstX2I	RGATCY	1 cut(s)	1463
BstXI	CCANNNNNNTGG	1 cut(s)	1567
BstYI	RGATCY	1 cut(s)	1463
BsuI	GTATCC	1 cut(s)	499
BsuRI	GGCC	7 cut(s)	93, 371, 1559, 1588, 1771, 1846, 1895
BtgI	CCRYGG	1 cut(s)	234
BtsI	GCAGTG	1 cut(s)	1146
BtsIMutI	CAGTG	3 cut(s)	1071, 1146, 2010
BveI	ACCTGC	1 cut(s)	453
Cac8I	GCNNGC	4 cut(s)	391, 402, 1204, 2037
CaiI	CAGNNNCTG	3 cut(s)	827, 1259, 2165
CciI	TCATGA	1 cut(s)	1917
Cfr10I	RCCGGY	2 cut(s)	1520, 1796
Cfr13I	GGNCC	8 cut(s)	566, 605, 758, 1549, 1599, 1844, 1924, 2057
CseI	GACGC	3 cut(s)	926, 2343, 2379
Csp6I	GTAC	6 cut(s)	696, 1593, 1750, 1817, 2065, 2393
CspAI	ACCGGT	1 cut(s)	1520
CspCI	CAANNNNNGTGG	2 cut(s)	2049, 2084
CviQI	GTAC	6 cut(s)	696, 1593, 1750, 1817, 2065, 2393
DrdI	GACNNNNNNGTC	2 cut(s)	1028, 1106
DseDI	GACNNNNNNGTC	2 cut(s)	1028, 1106
EaeI	YGGCCR	4 cut(s)	91, 369, 1586, 1769
Eam1104I	CTCTTC	3 cut(s)	293, 635, 1236
EarI	CTCTTC	3 cut(s)	293, 635, 1236
EciI	GGCGGA	2 cut(s)	275, 2428
Eco130I	CCWWGG	2 cut(s)	234, 1812
Eco24I	GRGCYC	1 cut(s)	2193
Eco31I	GGTCTC	1 cut(s)	1511
Eco47I	GGWCC	7 cut(s)	566, 605, 758, 1549, 1599, 1924, 2057
Eco57I	CTGAAG	2 cut(s)	1809, 2448
Eco72I	CACGTG	2 cut(s)	317, 1563
Eco91I	GGTNACC	1 cut(s)	1628
EcoO109I	RGGNCCY	1 cut(s)	1549
EcoO65I	GGTNACC	1 cut(s)	1628
EcoRI	GAATTC	1 cut(s)	1641
EcoRII	CCWGG	7 cut(s)	520, 601, 760, 971, 1481, 1771, 2377
EcoT14I	CCWWGG	2 cut(s)	234, 1812
EcoT22I	ATGCAT	1 cut(s)	718
EcoT38I	GRGCYC	1 cut(s)	2193
ErhI	CCWWGG	2 cut(s)	234, 1812
FaqI	GGGAC	5 cut(s)	197, 563, 1535, 1589, 2092
FbaI	TGATCA	3 cut(s)	664, 1780, 2347
Fnu4HI	GCNGC	9 cut(s)	797, 822, 825, 1260, 1769, 2139, 2151, 2160, 2270
FriOI	GRGCYC	1 cut(s)	2193
Fsp4HI	GCNGC	9 cut(s)	797, 822, 825, 1260, 1769, 2139, 2151, 2160, 2270
FspBI	CTAG	6 cut(s)	111, 1025, 1263, 1668, 2235, 2342
GluI	GCNGC	9 cut(s)	797, 822, 825, 1260, 1769, 2139, 2151, 2160, 2270
HaeIII	GGCC	7 cut(s)	93, 371, 1559, 1588, 1771, 1846, 1895
HapII	CCGG	9 cut(s)	48, 221, 294, 372, 1092, 1187, 1521, 1589, 1797
HgaI	GACGC	3 cut(s)	926, 2343, 2379
Hin1I	GRCGYC	3 cut(s)	5, 2335, 2371
HincII	GTYRAC	1 cut(s)	1348
HindII	GTYRAC	1 cut(s)	1348
HinfI	GANTC	8 cut(s)	300, 344, 438, 864, 1448, 1734, 2171, 2306
HpaII	CCGG	9 cut(s)	48, 221, 294, 372, 1092, 1187, 1521, 1589, 1797
HphI	GGTGA	7 cut(s)	283, 364, 430, 668, 1640, 1663, 2180
Hpy166II	GTNNAC	3 cut(s)	1348, 1750, 2240
Hpy8I	GTNNAC	3 cut(s)	1348, 1750, 2240
HpyCH4III	ACNGT	7 cut(s)	100, 202, 413, 737, 1868, 2014, 2422
HpyCH4IV	ACGT	3 cut(s)	316, 1562, 2067
HpySE526I	ACGT	3 cut(s)	316, 1562, 2067
Hsp92I	GRCGYC	3 cut(s)	5, 2335, 2371
KpnI	GGTACC	2 cut(s)	699, 2396
Ksp22I	TGATCA	3 cut(s)	664, 1780, 2347
LguI	GCTCTTC	1 cut(s)	1236
LmnI	GCTCC	6 cut(s)	265, 374, 532, 587, 1132, 1537
Lsp1109I	GCAGC	6 cut(s)	833, 836, 1246, 2150, 2171, 2256
LweI	GCATC	7 cut(s)	387, 484, 763, 913, 1459, 1644, 2401
MaeI	CTAG	6 cut(s)	111, 1025, 1263, 1668, 2235, 2342
MaeII	ACGT	3 cut(s)	316, 1562, 2067
MaeIII	GTNAC	9 cut(s)	310, 352, 407, 846, 1328, 1613, 1628, 1868, 2168
MbiI	CCGCTC	1 cut(s)	126
MfeI	CAATTG	3 cut(s)	596, 816, 942
MflI	RGATCY	1 cut(s)	1463
MhlI	GDGCHC	4 cut(s)	322, 1231, 2041, 2193
MlsI	TGGCCA	1 cut(s)	93
MluNI	TGGCCA	1 cut(s)	93
MlyI	GAGTC	4 cut(s)	447, 1442, 1728, 2165
Mox20I	TGGCCA	1 cut(s)	93
Mph1103I	ATGCAT	1 cut(s)	718
MscI	TGGCCA	1 cut(s)	93
MseI	TTAA	7 cut(s)	720, 792, 1008, 1340, 1434, 1502, 2460
MslI	CAYNNNNRTG	4 cut(s)	245, 632, 1100, 1565
Msp20I	TGGCCA	1 cut(s)	93
MspA1I	CMGCKG	2 cut(s)	59, 827
MspI	CCGG	9 cut(s)	48, 221, 294, 372, 1092, 1187, 1521, 1589, 1797
MunI	CAATTG	3 cut(s)	596, 816, 942
Mva1269I	GAATGC	1 cut(s)	1813
MvaI	CCWGG	7 cut(s)	522, 603, 762, 973, 1483, 1773, 2379
NciI	CCSGG	6 cut(s)	48, 221, 295, 1092, 1187, 1590
NcoI	CCATGG	1 cut(s)	234
NmuCI	GTSAC	7 cut(s)	310, 352, 407, 1613, 1628, 1868, 2168
NsiI	ATGCAT	1 cut(s)	718
NspI	RCATGY	5 cut(s)	166, 631, 1105, 1206, 1756
OliI	CACNNNNGTG	1 cut(s)	245
PaeI	GCATGC	1 cut(s)	1206
PagI	TCATGA	1 cut(s)	1917
PciI	ACATGT	4 cut(s)	162, 627, 1101, 1752
PciSI	GCTCTTC	1 cut(s)	1236
PctI	GAATGC	1 cut(s)	1813
PfeI	GAWTC	4 cut(s)	300, 344, 864, 2306
PflFI	GACNNNGTC	1 cut(s)	2132
PflMI	CCANNNNNTGG	1 cut(s)	235
PfoI	TCCNGGA	1 cut(s)	971
PinAI	ACCGGT	1 cut(s)	1520
PkrI	GCNGC	9 cut(s)	798, 823, 826, 1261, 1770, 2140, 2152, 2161, 2271
PleI	GAGTC	4 cut(s)	446, 1442, 1728, 2165
PmaCI	CACGTG	2 cut(s)	317, 1563
PmlI	CACGTG	2 cut(s)	317, 1563
PpsI	GAGTC	4 cut(s)	446, 1442, 1728, 2165
Ppu21I	YACGTR	3 cut(s)	317, 1563, 2068
PpuMI	RGGWCCY	1 cut(s)	1549
PscI	ACATGT	4 cut(s)	162, 627, 1101, 1752
PshBI	ATTAAT	1 cut(s)	1008
Psp5II	RGGWCCY	1 cut(s)	1549
Psp6I	CCWGG	7 cut(s)	520, 601, 760, 971, 1481, 1771, 2377
PspCI	CACGTG	2 cut(s)	317, 1563
PspEI	GGTNACC	1 cut(s)	1628
PspGI	CCWGG	7 cut(s)	520, 601, 760, 971, 1481, 1771, 2377
PspPI	GGNCC	8 cut(s)	566, 605, 758, 1549, 1599, 1844, 1924, 2057
PspPPI	RGGWCCY	1 cut(s)	1549
PsrI	GAACNNNNNNTAC	2 cut(s)	1403, 1435
PstI	CTGCAG	1 cut(s)	2359
PstNI	CAGNNNCTG	3 cut(s)	827, 1259, 2165
PsuI	RGATCY	1 cut(s)	1463
PsyI	GACNNNGTC	1 cut(s)	2132
PvuII	CAGCTG	2 cut(s)	59, 827
RsaI	GTAC	6 cut(s)	697, 1594, 1751, 1818, 2066, 2394
RsaNI	GTAC	6 cut(s)	696, 1593, 1750, 1817, 2065, 2393
RseI	CAYNNNNRTG	4 cut(s)	245, 632, 1100, 1565
SapI	GCTCTTC	1 cut(s)	1236
SaqAI	TTAA	7 cut(s)	720, 792, 1008, 1340, 1434, 1502, 2460
SatI	GCNGC	9 cut(s)	797, 822, 825, 1260, 1769, 2139, 2151, 2160, 2270
Sau96I	GGNCC	8 cut(s)	566, 605, 758, 1549, 1599, 1844, 1924, 2057
SchI	GAGTC	4 cut(s)	447, 1442, 1728, 2165
SduI	GDGCHC	4 cut(s)	322, 1231, 2041, 2193
SfaNI	GCATC	7 cut(s)	387, 484, 763, 913, 1459, 1644, 2401
SfcI	CTRYAG	3 cut(s)	1017, 1646, 2355
SinI	GGWCC	7 cut(s)	566, 605, 758, 1549, 1599, 1924, 2057
SmiMI	CAYNNNNRTG	4 cut(s)	245, 632, 1100, 1565
SmlI	CTYRAG	2 cut(s)	145, 1658
SmoI	CTYRAG	2 cut(s)	145, 1658
SphI	GCATGC	1 cut(s)	1206
SsiI	CCGC	7 cut(s)	126, 260, 797, 1768, 2092, 2150, 2439
SspI	AATATT	1 cut(s)	1306
SspMI	CTAG	6 cut(s)	111, 1025, 1263, 1668, 2235, 2342
StyI	CCWWGG	2 cut(s)	234, 1812
TaaI	ACNGT	7 cut(s)	100, 202, 413, 737, 1868, 2014, 2422
TaiI	ACGT	3 cut(s)	319, 1565, 2070
TaqI	TCGA	7 cut(s)	122, 441, 862, 1863, 2022, 2244, 2476
TaqII	GACCGA	1 cut(s)	1941
TatI	WGTACW	1 cut(s)	1749
TauI	GCSGC	3 cut(s)	799, 1771, 2153
TfiI	GAWTC	4 cut(s)	300, 344, 864, 2306
Tru1I	TTAA	7 cut(s)	720, 792, 1008, 1340, 1434, 1502, 2460
Tru9I	TTAA	7 cut(s)	720, 792, 1008, 1340, 1434, 1502, 2460
TscAI	CASTG	3 cut(s)	1078, 1153, 2017
TseFI	GTSAC	7 cut(s)	310, 352, 407, 1613, 1628, 1868, 2168
TseI	GCWGC	6 cut(s)	821, 824, 1259, 2138, 2159, 2269
Tsp45I	GTSAC	7 cut(s)	310, 352, 407, 1613, 1628, 1868, 2168
TspGWI	ACGGA	1 cut(s)	1591
TspRI	CASTG	3 cut(s)	1078, 1153, 2017
Tth111I	GACNNNGTC	1 cut(s)	2132
Van91I	CCANNNNNTGG	1 cut(s)	235
VpaK11BI	GGWCC	7 cut(s)	566, 605, 758, 1549, 1599, 1924, 2057
VspI	ATTAAT	1 cut(s)	1008
XapI	RAATTY	5 cut(s)	104, 659, 1641, 2287, 2363
XceI	RCATGY	5 cut(s)	166, 631, 1105, 1206, 1756
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1560, 1810
XspI	CTAG	6 cut(s)	111, 1025, 1263, 1668, 2235, 2342
Zsp2I	ATGCAT	1 cut(s)	718

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.