FvH4_2g24130

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
19712966 .. 19714033
1068 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g24130.t1

Sequence Viewer

Length: 1068 bp
ATGGCCTCCTCCCCGACAACCCGCCACCGTCTGGCCGGCCTCCTGTCTTCCCCCTTCTTCCTCTTCTTCCTCCTCTTCCACTACCACATCGCTGCCGCGGAAAGCATCCGCTTGGCCGGCATCATCCGGAAGCCTACTCCGGATGTTGCCAACATCTTCCGAGAGGCCCCGGCTTTTCGGAACGGAGACTCCTGCAGCGACGAGGAGAGGATCCACATTGCCATGACATTGGACTCCAACTACTTAAGGGGCACAATGGCCGCCGTGCTTTCCATCCTCCAGCACTCCACGTGCCCGGAGATGGTCGAGTTCCACTTCCTCTCGGCCAGGTTCGAGCCCGACGTACTCTCCAACATCAAGGCCACCTTCCCCTATCTCAAATTCAACGTCTACCGATTCGATTCCAACAAGGTACGTGGTAAGATATCCAAGTCCATACGCCAAGCCCTAGACCAGCCATTGAACTACGCCAGAATATACCTAGCTGACATCATCCCATCGGACGTGAAGAGGGTTTTGTACCTAGATTCAGACCTCGTGGTGGTCGATGACGTGGCGAAGCTATGGAAGGTTGACTTGCAAGGCAAGGTATTGGCTGCACCGGAGTATTGTCACGCGAATTTCACACCCTACTTTACCAACGTGTTTTGGTCCGACCCGGAGCTTTCGAGAACTTTCCAGGGCCGAAAGCCGTGCTATTTCAACACAGGGGTGATGGTGGTGGATGTGGAGAGGTGGAGACAAGGTGGCTACACTAAGAAAATGGAGGAGTGGATGAAGGTGCAGAAGCATAAGAGGATTTACCACCTAGGGTCATTGCCGCCGTTTTTGTTGGTTTTGGCGGGAGATATTACGGCTGTGGATCACAGGTGGAACCAACACGGGCTCGGTGGCGACAATCTAGAAGGAAAGTGTAGGAGCTTGCATCCTGGTCCTATTAGCCTGCTTCATTGGAGTGGGAAAGGAAAACCCTGGTTGAGGTTAGATTCGAGAAAGCCTTGCACCGTTGATCATCTATGGGCACCTTATGATCTCTATCGTTCTTCTGCTCATTATTTCGAAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

356

Amino Acids

40.75

Weight (kDa)

8.98

Isoelectric Point (pI)

48.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 72 - 327 1.1e-57 Glycosyl transferase family 8
Glyco_transf_24 PF18404 83 - 252 2.6e-10 Glucosyltransferase 24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1021
AccB7I CCANNNNNTGG 1 cut(s) 31
AccI GTMKAC 1 cut(s) 390
AccII CGCG 2 cut(s) 98, 617
AccIII TCCGGA 2 cut(s) 126, 139
AciI CCGC 7 cut(s) 22, 96, 98, 109, 261, 821, 842
AclWI GGATC 3 cut(s) 205, 218, 870
AcoI YGGCCR 4 cut(s) 33, 114, 258, 324
AcsI RAATTY 2 cut(s) 380, 619
AcvI CACGTG 1 cut(s) 291
AfaI GTAC 3 cut(s) 345, 414, 521
AfiI CCNNNNNNNGG 4 cut(s) 31, 301, 541, 978
AflII CTTAAG 1 cut(s) 244
AflIII ACRYGT 1 cut(s) 642
AgsI TTSAA 3 cut(s) 385, 463, 703
AjiI CACGTC 2 cut(s) 505, 553
AjnI CCWGG 4 cut(s) 326, 678, 928, 971
AleI CACNNNNGTG 1 cut(s) 710
AloI GAACNNNNNNTCC 2 cut(s) 173, 205
AluBI AGCT 4 cut(s) 485, 562, 664, 921
AluI AGCT 4 cut(s) 485, 562, 664, 921
Alw26I GTCTC 2 cut(s) 180, 733
AlwI GGATC 3 cut(s) 205, 218, 870
Aor13HI TCCGGA 2 cut(s) 126, 139
AoxI GGCC 9 cut(s) 3, 33, 37, 114, 165, 258, 324, 360, 682
ApeKI GCWGC 3 cut(s) 92, 195, 596
ApoI RAATTY 2 cut(s) 380, 619
ArsI GACNNNNNNTTYG 2 cut(s) 372, 404
AspA2I CCTAGG 1 cut(s) 808
AspS9I GGNCC 4 cut(s) 166, 651, 682, 932
AsuC2I CCSGG 3 cut(s) 170, 296, 659
AsuHPI GGTGA 1 cut(s) 724
AsuII TTCGAA 1 cut(s) 1059
AvaII GGWCC 2 cut(s) 651, 932
AvrII CCTAGG 1 cut(s) 808
BaeGI GKGCMC 3 cut(s) 254, 296, 1024
BamHI GGATCC 1 cut(s) 210
BanI GGYRCC 1 cut(s) 1021
BanII GRGCYC 2 cut(s) 339, 888
BauI CACGAG 1 cut(s) 536
BbrPI CACGTG 1 cut(s) 291
BbsI GAAGAC 1 cut(s) 39
BbvI GCAGC 3 cut(s) 79, 207, 583
BccI CCATC 4 cut(s) 281, 295, 505, 709
BceAI ACGGC 4 cut(s) 248, 676, 808, 870
BcgI CGANNNNNNTGC 2 cut(s) 675, 709
BciT130I CCWGG 4 cut(s) 328, 680, 930, 973
BclI TGATCA 1 cut(s) 1009
BcnI CCSGG 3 cut(s) 170, 296, 659
BcoDI GTCTC 2 cut(s) 180, 733
BfaI CTAG 5 cut(s) 449, 482, 524, 809, 902
BfmI CTRYAG 1 cut(s) 193
BfrI CTTAAG 1 cut(s) 244
BisI GCNGC 6 cut(s) 93, 96, 196, 261, 597, 821
BlnI CCTAGG 1 cut(s) 808
BlsI GCNGC 6 cut(s) 94, 97, 197, 262, 598, 822
Bme1390I CCNGG 7 cut(s) 170, 296, 328, 659, 680, 930, 973
Bme18I GGWCC 2 cut(s) 651, 932
BmgBI CACGTC 2 cut(s) 505, 553
BmgT120I GGNCC 4 cut(s) 166, 651, 682, 932
BmiI GGNNCC 4 cut(s) 168, 212, 875, 1023
BmrFI CCNGG 7 cut(s) 170, 296, 328, 659, 680, 930, 973
BmsI GCATC 3 cut(s) 114, 129, 934
BpiI GAAGAC 1 cut(s) 39
BpmI CTGGAG 1 cut(s) 263
Bpu14I TTCGAA 1 cut(s) 1059
BpuMI CCSGG 3 cut(s) 170, 296, 659
BsaAI YACGTR 2 cut(s) 291, 416
BsaBI GATNNNNATC 1 cut(s) 1035
BsaJI CCNNGG 5 cut(s) 96, 168, 679, 808, 971
BsaWI WCCGGW 3 cut(s) 126, 139, 601
BsaXI ACNNNNNCTCC 6 cut(s) 173, 203, 332, 362, 730, 760
Bsc4I CCNNNNNNNGG 4 cut(s) 31, 301, 541, 978
Bse118I RCCGGY 2 cut(s) 35, 116
Bse3DI GCAATG 2 cut(s) 216, 815
Bse8I GATNNNNATC 1 cut(s) 1035
BseAI TCCGGA 2 cut(s) 126, 139
BseBI CCWGG 4 cut(s) 328, 680, 930, 973
BseDI CCNNGG 5 cut(s) 96, 168, 679, 808, 971
BseGI GGATG 8 cut(s) 105, 123, 148, 273, 492, 730, 780, 925
BseJI GATNNNNATC 1 cut(s) 1035
BseLI CCNNNNNNNGG 4 cut(s) 31, 301, 541, 978
BseMI GCAATG 2 cut(s) 216, 815
BseRI GAGGAG 3 cut(s) 62, 218, 782
BseSI GKGCMC 3 cut(s) 254, 296, 1024
BseXI GCAGC 3 cut(s) 79, 207, 583
BsgI GTGCAG 2 cut(s) 582, 803
Bsh1236I CGCG 2 cut(s) 98, 617
BshFI GGCC 9 cut(s) 5, 35, 39, 116, 167, 260, 326, 362, 684
BshNI GGYRCC 1 cut(s) 1021
BsiSI CCGG 8 cut(s) 36, 117, 127, 140, 170, 296, 602, 659
BslI CCNNNNNNNGG 4 cut(s) 31, 301, 541, 978
BsmAI GTCTC 2 cut(s) 180, 733
BsnI GGCC 9 cut(s) 5, 35, 39, 116, 167, 260, 326, 362, 684
Bsp119I TTCGAA 1 cut(s) 1059
Bsp1286I GDGCHC 5 cut(s) 254, 296, 339, 888, 1024
Bsp13I TCCGGA 2 cut(s) 126, 139
Bsp143I GATC 4 cut(s) 210, 862, 1009, 1030
BspACI CCGC 7 cut(s) 22, 96, 98, 109, 261, 821, 842
BspANI GGCC 9 cut(s) 5, 35, 39, 116, 167, 260, 326, 362, 684
BspEI TCCGGA 2 cut(s) 126, 139
BspFNI CGCG 2 cut(s) 98, 617
BspLI GGNNCC 4 cut(s) 168, 212, 875, 1023
BspMAI CTGCAG 1 cut(s) 197
BspPI GGATC 3 cut(s) 205, 218, 870
BspT104I TTCGAA 1 cut(s) 1059
BspT107I GGYRCC 1 cut(s) 1021
BspTI CTTAAG 1 cut(s) 244
BsrDI GCAATG 2 cut(s) 216, 815
BsrFI RCCGGY 2 cut(s) 35, 116
BssAI RCCGGY 2 cut(s) 35, 116
BssECI CCNNGG 5 cut(s) 96, 168, 679, 808, 971
BssMI GATC 4 cut(s) 210, 862, 1009, 1030
BssSI CACGAG 1 cut(s) 536
BssT1I CCWWGG 1 cut(s) 808
Bst2BI CACGAG 1 cut(s) 536
Bst2UI CCWGG 4 cut(s) 328, 680, 930, 973
Bst4CI ACNGT 2 cut(s) 29, 1006
Bst6I CTCTTC 3 cut(s) 68, 80, 503
BstAFI CTTAAG 1 cut(s) 244
BstBAI YACGTR 2 cut(s) 291, 416
BstBI TTCGAA 1 cut(s) 1059
BstC8I GCNNGC 4 cut(s) 37, 118, 923, 944
BstDEI CTNAG 1 cut(s) 756
BstDSI CCRYGG 1 cut(s) 96
BstENI CCTNNNNNAGG 1 cut(s) 976
BstF5I GGATG 8 cut(s) 105, 123, 148, 273, 492, 730, 780, 925
BstFNI CGCG 2 cut(s) 98, 617
BstKTI GATC 4 cut(s) 213, 865, 1012, 1033
BstMAI GTCTC 2 cut(s) 180, 733
BstMBI GATC 4 cut(s) 210, 862, 1009, 1030
BstMWI GCNNNNNNNGC 1 cut(s) 117
BstNI CCWGG 4 cut(s) 328, 680, 930, 973
BstSCI CCNGG 7 cut(s) 168, 294, 326, 657, 678, 928, 971
BstSFI CTRYAG 1 cut(s) 193
BstSLI GKGCMC 3 cut(s) 254, 296, 1024
BstUI CGCG 2 cut(s) 98, 617
BstV1I GCAGC 3 cut(s) 79, 207, 583
BstV2I GAAGAC 1 cut(s) 39
BstX2I RGATCY 1 cut(s) 210
BstXI CCANNNNNNTGG 1 cut(s) 229
BstYI RGATCY 1 cut(s) 210
BsuRI GGCC 9 cut(s) 5, 35, 39, 116, 167, 260, 326, 362, 684
BtgI CCRYGG 1 cut(s) 96
BtgZI GCGATG 1 cut(s) 73
BtrI CACGTC 2 cut(s) 505, 553
BtsCI GGATG 8 cut(s) 105, 123, 148, 273, 492, 730, 780, 925
Cac8I GCNNGC 4 cut(s) 37, 118, 923, 944
Cfr10I RCCGGY 2 cut(s) 35, 116
Cfr13I GGNCC 4 cut(s) 166, 651, 682, 932
Cfr42I CCGCGG 1 cut(s) 99
Csp6I GTAC 3 cut(s) 344, 413, 520
CspCI CAANNNNNGTGG 2 cut(s) 397, 432
CviAII CATG 1 cut(s) 223
CviQI GTAC 3 cut(s) 344, 413, 520
DdeI CTNAG 1 cut(s) 756
DpnI GATC 4 cut(s) 212, 864, 1011, 1032
DpnII GATC 4 cut(s) 210, 862, 1009, 1030
EaeI YGGCCR 4 cut(s) 33, 114, 258, 324
Eam1104I CTCTTC 3 cut(s) 68, 80, 503
EarI CTCTTC 3 cut(s) 68, 80, 503
Eco130I CCWWGG 1 cut(s) 808
Eco24I GRGCYC 2 cut(s) 339, 888
Eco32I GATATC 1 cut(s) 426
Eco47I GGWCC 2 cut(s) 651, 932
Eco72I CACGTG 1 cut(s) 291
EcoNI CCTNNNNNAGG 1 cut(s) 976
EcoO109I RGGNCCY 1 cut(s) 166
EcoRII CCWGG 4 cut(s) 326, 678, 928, 971
EcoRV GATATC 1 cut(s) 426
EcoT14I CCWWGG 1 cut(s) 808
EcoT38I GRGCYC 2 cut(s) 339, 888
ErhI CCWWGG 1 cut(s) 808
FaeI CATG 1 cut(s) 226
FaiI YATR 7 cut(s) 224, 437, 478, 565, 792, 1018, 1029
FalI AAGNNNNNCTT 4 cut(s) 350, 382, 560, 592
FatI CATG 1 cut(s) 222
FauI CCCGC 2 cut(s) 29, 835
FbaI TGATCA 1 cut(s) 1009
FblI GTMKAC 1 cut(s) 390
Fnu4HI GCNGC 6 cut(s) 93, 96, 196, 261, 597, 821
FokI GGATG 8 cut(s) 92, 110, 155, 260, 479, 737, 787, 912
FriOI GRGCYC 2 cut(s) 339, 888
FseI GGCCGGCC 1 cut(s) 39
Fsp4HI GCNGC 6 cut(s) 93, 96, 196, 261, 597, 821
FspBI CTAG 5 cut(s) 449, 482, 524, 809, 902
GluI GCNGC 6 cut(s) 93, 96, 196, 261, 597, 821
GsuI CTGGAG 1 cut(s) 263
HaeIII GGCC 9 cut(s) 5, 35, 39, 116, 167, 260, 326, 362, 684
HapII CCGG 8 cut(s) 36, 117, 127, 140, 170, 296, 602, 659
Hin1II CATG 1 cut(s) 226
HincII GTYRAC 1 cut(s) 574
HindII GTYRAC 1 cut(s) 574
HinfI GANTC 6 cut(s) 188, 233, 396, 401, 527, 986
HpaII CCGG 8 cut(s) 36, 117, 127, 140, 170, 296, 602, 659
HphI GGTGA 1 cut(s) 724
Hpy166II GTNNAC 2 cut(s) 391, 574
Hpy188I TCNGA 5 cut(s) 161, 180, 502, 532, 655
Hpy188III TCNNGA 5 cut(s) 127, 140, 669, 902, 990
Hpy8I GTNNAC 2 cut(s) 391, 574
Hpy99I CGWCG 2 cut(s) 203, 344
HpyAV CCTTC 5 cut(s) 64, 376, 562, 772, 899
HpyCH4III ACNGT 2 cut(s) 29, 1006
HpyCH4IV ACGT 7 cut(s) 290, 342, 387, 415, 504, 552, 642
HpyCH4V TGCA 6 cut(s) 195, 580, 599, 784, 925, 1002
HpyF10VI GCNNNNNNNGC 1 cut(s) 117
HpyF3I CTNAG 1 cut(s) 756
HpySE526I ACGT 7 cut(s) 290, 342, 387, 415, 504, 552, 642
Hsp92II CATG 1 cut(s) 226
Kpn2I TCCGGA 2 cut(s) 126, 139
KroI GCCGGC 2 cut(s) 35, 116
KroNI GCCGGC 2 cut(s) 37, 118
Ksp22I TGATCA 1 cut(s) 1009
KspI CCGCGG 1 cut(s) 99
Kzo9I GATC 4 cut(s) 210, 862, 1009, 1030
LmnI GCTCC 2 cut(s) 661, 918
Lsp1109I GCAGC 3 cut(s) 79, 207, 583
LweI GCATC 3 cut(s) 114, 129, 934
MaeI CTAG 5 cut(s) 449, 482, 524, 809, 902
MaeII ACGT 7 cut(s) 290, 342, 387, 415, 504, 552, 642
MaeIII GTNAC 1 cut(s) 611
MalI GATC 4 cut(s) 212, 864, 1011, 1032
MboI GATC 4 cut(s) 210, 862, 1009, 1030
MboII GAAGA 8 cut(s) 39, 49, 55, 58, 67, 148, 520, 1035
MflI RGATCY 1 cut(s) 210
MhlI GDGCHC 5 cut(s) 254, 296, 339, 888, 1024
MluCI AATT 2 cut(s) 380, 619
MlyI GAGTC 2 cut(s) 182, 227
MmeI TCCRAC 4 cut(s) 261, 375, 429, 678
MroI TCCGGA 2 cut(s) 126, 139
MroNI GCCGGC 2 cut(s) 35, 116
MseI TTAA 1 cut(s) 245
MslI CAYNNNNRTG 3 cut(s) 221, 710, 954
MspA1I CMGCKG 1 cut(s) 98
MspCI CTTAAG 1 cut(s) 244
MspI CCGG 8 cut(s) 36, 117, 127, 140, 170, 296, 602, 659
MspR9I CCNGG 7 cut(s) 170, 296, 328, 659, 680, 930, 973
MvaI CCWGG 4 cut(s) 328, 680, 930, 973
MvnI CGCG 2 cut(s) 98, 617
MwoI GCNNNNNNNGC 1 cut(s) 117
NaeI GCCGGC 2 cut(s) 37, 118
NciI CCSGG 3 cut(s) 170, 296, 659
NdeII GATC 4 cut(s) 210, 862, 1009, 1030
NgoMIV GCCGGC 2 cut(s) 35, 116
NlaIII CATG 1 cut(s) 226
NlaIV GGNNCC 4 cut(s) 168, 212, 875, 1023
NmeAIII GCCGAG 1 cut(s) 302
NmuCI GTSAC 1 cut(s) 611
NspV TTCGAA 1 cut(s) 1059
OliI CACNNNNGTG 1 cut(s) 710
PcsI WCGNNNNNNNCGW 2 cut(s) 339, 543
PdiI GCCGGC 2 cut(s) 37, 118
PfeI GAWTC 4 cut(s) 396, 401, 527, 986
PflMI CCANNNNNTGG 1 cut(s) 31
PkrI GCNGC 6 cut(s) 94, 97, 197, 262, 598, 822
PleI GAGTC 2 cut(s) 182, 227
PmaCI CACGTG 1 cut(s) 291
PmlI CACGTG 1 cut(s) 291
PpsI GAGTC 2 cut(s) 182, 227
Ppu21I YACGTR 2 cut(s) 291, 416
Psp6I CCWGG 4 cut(s) 326, 678, 928, 971
PspCI CACGTG 1 cut(s) 291
PspGI CCWGG 4 cut(s) 326, 678, 928, 971
PspN4I GGNNCC 4 cut(s) 168, 212, 875, 1023
PspPI GGNCC 4 cut(s) 166, 651, 682, 932
PstI CTGCAG 1 cut(s) 197
PsuI RGATCY 1 cut(s) 210
RigI GGCCGGCC 1 cut(s) 39
RsaI GTAC 3 cut(s) 345, 414, 521
RsaNI GTAC 3 cut(s) 344, 413, 520
RseI CAYNNNNRTG 3 cut(s) 221, 710, 954
SacII CCGCGG 1 cut(s) 99
SaqAI TTAA 1 cut(s) 245
SatI GCNGC 6 cut(s) 93, 96, 196, 261, 597, 821
Sau3AI GATC 4 cut(s) 210, 862, 1009, 1030
Sau96I GGNCC 4 cut(s) 166, 651, 682, 932
SchI GAGTC 2 cut(s) 182, 227
ScrFI CCNGG 7 cut(s) 170, 296, 328, 659, 680, 930, 973
SduI GDGCHC 5 cut(s) 254, 296, 339, 888, 1024
SfaNI GCATC 3 cut(s) 114, 129, 934
SfcI CTRYAG 1 cut(s) 193
Sfr303I CCGCGG 1 cut(s) 99
SfuI TTCGAA 1 cut(s) 1059
SgrBI CCGCGG 1 cut(s) 99
SinI GGWCC 2 cut(s) 651, 932
SmiMI CAYNNNNRTG 3 cut(s) 221, 710, 954
SmlI CTYRAG 1 cut(s) 244
SmoI CTYRAG 1 cut(s) 244
Sse9I AATT 2 cut(s) 380, 619
SsiI CCGC 7 cut(s) 22, 96, 98, 109, 261, 821, 842
SspMI CTAG 5 cut(s) 449, 482, 524, 809, 902
StyD4I CCNGG 7 cut(s) 168, 294, 326, 657, 678, 928, 971
StyI CCWWGG 1 cut(s) 808
TaaI ACNGT 2 cut(s) 29, 1006
TaiI ACGT 7 cut(s) 293, 345, 390, 418, 507, 555, 645
TaqI TCGA 7 cut(s) 306, 333, 399, 546, 668, 989, 1059
TasI AATT 2 cut(s) 380, 619
TauI GCSGC 3 cut(s) 98, 263, 823
TfiI GAWTC 4 cut(s) 396, 401, 527, 986
Tru1I TTAA 1 cut(s) 245
Tru9I TTAA 1 cut(s) 245
TseFI GTSAC 1 cut(s) 611
TseI GCWGC 3 cut(s) 92, 195, 596
Tsp45I GTSAC 1 cut(s) 611
TspDTI ATGAA 2 cut(s) 791, 938
TspGWI ACGGA 1 cut(s) 198
Van91I CCANNNNNTGG 1 cut(s) 31
Vha464I CTTAAG 1 cut(s) 244
VpaK11BI GGWCC 2 cut(s) 651, 932
XagI CCTNNNNNAGG 1 cut(s) 976
XapI RAATTY 2 cut(s) 380, 619
XbaI TCTAGA 1 cut(s) 901
XmaJI CCTAGG 1 cut(s) 808
XmiI GTMKAC 1 cut(s) 390
XspI CTAG 5 cut(s) 449, 482, 524, 809, 902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.