MD16G1180100.v1.1

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Forward (+)
15489271 .. 15490323
1053 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1180100.v1.1.491

Sequence Viewer

Length: 1053 bp
ATGGCCTTGTTGAGTACTCCAACCTCTCTCCCAATACTCCTTGGCCTCCTGTCCATCCTCCTCTTCCACCCCATCACCACCACTTCCGGCATTCGCCTAGGCTTTGTTCCCCGTCCCTCCCCTGACCTTCCCGTCTTCCGTGAAGCGCCTGCCTTCCGAAATGGCGAGCAATGTGGCTCCGAAAATGCGGATGGCATCCATGTTGCCATGACCCTAGATGCCAATTACATTCGCGGCACAATGGCTGCCGTATTCTCTTTGTTGCAACACTCGGCATGCCCGGCAAATCTCTACTTTCACTTCCTCTCCGCGCATACGACGCCCAAGTTCTTTTCCAGCATAAAGTCTACGTTCCCTTACTTGAACTTCAAGACGTATGCCTTTGATTCGGACCGGGTTCGCGGGAAGATATCAAAATCTATAAGACAAGCATTGGATCGGCCTATGAATTATGCTAGAATCTATCTTGCTGACATCCTTCCGAATGAGATGAGACGTGTTATATACTTGGACTCGGACCTCGTTGTGGTGGATGACATTGCCAAGCTATGGAGTGTGGACATGGAAGATATGGTGGTGGCTGCACCGGAATATTGCCGGGCAAATTTCACAGAGTATTTCACTAACGCATTTTGGTGTGACCAGGATTTGTCGAAGACGTTCCAAGGAAGAAACCCGTGTTATTTCAACACAGGAGTGATGGTGGTGGATGTGGATAAATGGAGGAAAGGAGGGTATACACAGAAGGTTGAGGAGTGGATGGCGTTGCAAAAGCGAAAGAGGCTATACCATTTGGGGTCTCTGCCGCCCTTTTTGCTGCTTTTGGCCGGAAACATCAAGGCTGTGGATCACCGGTGGAACCAGCATGGCTTAGGAGGTGACAACTTTGAAGGAAGGTGTAGGAGCCTCCACCCTGGTCCCATTAGTCTTTTGCACTGGAGCGGGAAGGGTAAGCCATGGTTGAGGTTGGACTCCCGGAAGCCATGCACCGTCGATCATCTCTGGGCACCATACGATCTCTACCATTCGTCGAGACACTTTCTGGAAGAATAA

Protein Analysis

351

Amino Acids

39.92

Weight (kDa)

8.74

Isoelectric Point (pI)

38.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 67 - 322 6.8e-57 Glycosyl transferase family 8
Glyco_transf_24 PF18404 82 - 245 2.2e-10 Glucosyltransferase 24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 131
AccB1I GGYRCC 1 cut(s) 1006
AccB7I CCANNNNNTGG 1 cut(s) 549
AccBSI CCGCTC 1 cut(s) 942
AccI GTMKAC 2 cut(s) 347, 737
AccII CGCG 3 cut(s) 234, 311, 402
AciI CCGC 6 cut(s) 188, 234, 309, 402, 806, 942
AclWI GGATC 2 cut(s) 444, 855
AcoI YGGCCR 1 cut(s) 825
AcsI RAATTY 1 cut(s) 604
AcyI GRCGYC 1 cut(s) 320
AfaI GTAC 1 cut(s) 16
AfiI CCNNNNNNNGG 2 cut(s) 526, 549
AflIII ACRYGT 1 cut(s) 496
AgeI ACCGGT 1 cut(s) 852
AgsI TTSAA 4 cut(s) 364, 370, 688, 890
AjiI CACGTC 1 cut(s) 497
AjnI CCWGG 2 cut(s) 642, 913
AleI CACNNNNGTG 1 cut(s) 695
AluBI AGCT 1 cut(s) 547
AluI AGCT 1 cut(s) 547
Alw26I GTCTC 3 cut(s) 487, 804, 1027
AlwI GGATC 2 cut(s) 444, 855
AoxI GGCC 4 cut(s) 3, 43, 440, 825
ApeKI GCWGC 3 cut(s) 245, 581, 817
ApoI RAATTY 1 cut(s) 604
AsiGI ACCGGT 1 cut(s) 852
Asp700I GAANNNNTTC 1 cut(s) 659
AspA2I CCTAGG 1 cut(s) 97
AspLEI GCGC 2 cut(s) 148, 313
AspS9I GGNCC 3 cut(s) 391, 517, 917
AsuC2I CCSGG 4 cut(s) 281, 395, 599, 976
AsuHPI GGTGA 3 cut(s) 67, 842, 890
AvaII GGWCC 3 cut(s) 391, 517, 917
AvrII CCTAGG 1 cut(s) 97
BaeGI GKGCMC 1 cut(s) 1009
BanI GGYRCC 1 cut(s) 1006
BbsI GAAGAC 2 cut(s) 127, 662
BbvI GCAGC 3 cut(s) 232, 568, 804
BccI CCATC 5 cut(s) 62, 80, 185, 694, 754
BceAI ACGGC 1 cut(s) 233
BciT130I CCWGG 2 cut(s) 644, 915
BcnI CCSGG 4 cut(s) 281, 395, 599, 976
BcoDI GTCTC 3 cut(s) 487, 804, 1027
BfaI CTAG 3 cut(s) 98, 215, 456
BfoI RGCGCY 1 cut(s) 149
BisI GCNGC 5 cut(s) 235, 246, 582, 806, 818
BlnI CCTAGG 1 cut(s) 97
BlsI GCNGC 5 cut(s) 236, 247, 583, 807, 819
BmcAI AGTACT 1 cut(s) 16
Bme1390I CCNGG 6 cut(s) 281, 395, 599, 644, 915, 976
Bme18I GGWCC 3 cut(s) 391, 517, 917
BmgBI CACGTC 1 cut(s) 497
BmgT120I GGNCC 3 cut(s) 391, 517, 917
BmiI GGNNCC 5 cut(s) 178, 860, 905, 919, 1008
BmrFI CCNGG 6 cut(s) 281, 395, 599, 644, 915, 976
BmsI GCATC 2 cut(s) 204, 208
BpiI GAAGAC 2 cut(s) 127, 662
BpmI CTGGAG 1 cut(s) 958
Bpu10I CCTNAGC 1 cut(s) 871
BpuMI CCSGG 4 cut(s) 281, 395, 599, 976
BsaHI GRCGYC 1 cut(s) 320
BsaI GGTCTC 1 cut(s) 804
BsaJI CCNNGG 5 cut(s) 40, 97, 664, 913, 956
BsaWI WCCGGW 2 cut(s) 586, 852
BsaXI ACNNNNNCTCC 4 cut(s) 290, 320, 687, 717
Bsc4I CCNNNNNNNGG 2 cut(s) 526, 549
Bse118I RCCGGY 1 cut(s) 852
Bse1I ACTGG 1 cut(s) 941
Bse3DI GCAATG 2 cut(s) 176, 537
BseBI CCWGG 2 cut(s) 644, 915
BseDI CCNNGG 5 cut(s) 40, 97, 664, 913, 956
BseGI GGATG 7 cut(s) 54, 195, 196, 474, 538, 715, 765
BseLI CCNNNNNNNGG 2 cut(s) 526, 549
BseMI GCAATG 2 cut(s) 176, 537
BseNI ACTGG 1 cut(s) 941
BseRI GAGGAG 2 cut(s) 50, 767
BseSI GKGCMC 1 cut(s) 1009
BseXI GCAGC 3 cut(s) 232, 568, 804
BsgI GTGCAG 1 cut(s) 567
Bsh1236I CGCG 3 cut(s) 234, 311, 402
BshFI GGCC 4 cut(s) 5, 45, 442, 827
BshNI GGYRCC 1 cut(s) 1006
BshTI ACCGGT 1 cut(s) 852
BsiSI CCGG 8 cut(s) 87, 281, 394, 587, 598, 828, 853, 976
BslFI GGGAC 2 cut(s) 99, 903
BslI CCNNNNNNNGG 2 cut(s) 526, 549
BsmAI GTCTC 3 cut(s) 487, 804, 1027
BsmBI CGTCTC 1 cut(s) 487
BsmFI GGGAC 2 cut(s) 99, 903
BsmI GAATGC 1 cut(s) 90
BsnI GGCC 4 cut(s) 5, 45, 442, 827
Bso31I GGTCTC 1 cut(s) 804
Bsp1286I GDGCHC 1 cut(s) 1009
Bsp143I GATC 4 cut(s) 436, 847, 994, 1015
Bsp19I CCATGG 1 cut(s) 956
BspACI CCGC 6 cut(s) 188, 234, 309, 402, 806, 942
BspANI GGCC 4 cut(s) 5, 45, 442, 827
BspFNI CGCG 3 cut(s) 234, 311, 402
BspLI GGNNCC 5 cut(s) 178, 860, 905, 919, 1008
BspPI GGATC 2 cut(s) 444, 855
BspT107I GGYRCC 1 cut(s) 1006
BspTNI GGTCTC 1 cut(s) 804
BsrBI CCGCTC 1 cut(s) 942
BsrDI GCAATG 2 cut(s) 176, 537
BsrFI RCCGGY 1 cut(s) 852
BsrI ACTGG 1 cut(s) 941
BssAI RCCGGY 1 cut(s) 852
BssECI CCNNGG 5 cut(s) 40, 97, 664, 913, 956
BssMI GATC 4 cut(s) 436, 847, 994, 1015
BssNAI GTATAC 1 cut(s) 738
BssNI GRCGYC 1 cut(s) 320
BssT1I CCWWGG 4 cut(s) 40, 97, 664, 956
Bst1107I GTATAC 1 cut(s) 738
Bst2UI CCWGG 2 cut(s) 644, 915
Bst4CI ACNGT 1 cut(s) 991
Bst6I CTCTTC 1 cut(s) 68
BstACI GRCGYC 1 cut(s) 320
BstC8I GCNNGC 3 cut(s) 150, 167, 277
BstDEI CTNAG 1 cut(s) 871
BstDSI CCRYGG 1 cut(s) 956
BstF5I GGATG 7 cut(s) 54, 195, 196, 474, 538, 715, 765
BstFNI CGCG 3 cut(s) 234, 311, 402
BstH2I RGCGCY 1 cut(s) 149
BstHHI GCGC 2 cut(s) 148, 313
BstKTI GATC 4 cut(s) 439, 850, 997, 1018
BstMAI GTCTC 3 cut(s) 487, 804, 1027
BstMBI GATC 4 cut(s) 436, 847, 994, 1015
BstMWI GCNNNNNNNGC 4 cut(s) 281, 319, 781, 814
BstNI CCWGG 2 cut(s) 644, 915
BstNSI RCATGY 1 cut(s) 279
BstSCI CCNGG 6 cut(s) 279, 393, 597, 642, 913, 974
BstSLI GKGCMC 1 cut(s) 1009
BstUI CGCG 3 cut(s) 234, 311, 402
BstV1I GCAGC 3 cut(s) 232, 568, 804
BstV2I GAAGAC 2 cut(s) 127, 662
BstZ17I GTATAC 1 cut(s) 738
BsuRI GGCC 4 cut(s) 5, 45, 442, 827
BtgI CCRYGG 1 cut(s) 956
BtrI CACGTC 1 cut(s) 497
BtsCI GGATG 7 cut(s) 54, 195, 196, 474, 538, 715, 765
BtsIMutI CAGTG 1 cut(s) 934
Cac8I GCNNGC 3 cut(s) 150, 167, 277
CfoI GCGC 2 cut(s) 148, 313
Cfr10I RCCGGY 1 cut(s) 852
Cfr13I GGNCC 3 cut(s) 391, 517, 917
CpoI CGGWCCG 1 cut(s) 391
CseI GACGC 1 cut(s) 328
Csp6I GTAC 1 cut(s) 15
CspAI ACCGGT 1 cut(s) 852
CspI CGGWCCG 1 cut(s) 391
CviAII CATG 7 cut(s) 200, 208, 276, 562, 866, 957, 984
CviQI GTAC 1 cut(s) 15
DdeI CTNAG 1 cut(s) 871
DpnI GATC 4 cut(s) 438, 849, 996, 1017
DpnII GATC 4 cut(s) 436, 847, 994, 1015
DrdI GACNNNNNNGTC 1 cut(s) 131
DseDI GACNNNNNNGTC 1 cut(s) 131
EaeI YGGCCR 1 cut(s) 825
Eam1104I CTCTTC 1 cut(s) 68
EarI CTCTTC 1 cut(s) 68
Eco130I CCWWGG 4 cut(s) 40, 97, 664, 956
Eco31I GGTCTC 1 cut(s) 804
Eco32I GATATC 1 cut(s) 411
Eco47I GGWCC 3 cut(s) 391, 517, 917
EcoRII CCWGG 2 cut(s) 642, 913
EcoRV GATATC 1 cut(s) 411
EcoT14I CCWWGG 4 cut(s) 40, 97, 664, 956
ErhI CCWWGG 4 cut(s) 40, 97, 664, 956
Esp3I CGTCTC 1 cut(s) 487
FaeI CATG 7 cut(s) 203, 211, 279, 565, 869, 960, 987
FaqI GGGAC 2 cut(s) 99, 903
FatI CATG 7 cut(s) 199, 207, 275, 561, 865, 956, 983
FauI CCCGC 2 cut(s) 395, 935
FblI GTMKAC 2 cut(s) 347, 737
Fnu4HI GCNGC 5 cut(s) 235, 246, 582, 806, 818
FokI GGATG 7 cut(s) 41, 182, 203, 461, 545, 722, 772
Fsp4HI GCNGC 5 cut(s) 235, 246, 582, 806, 818
FspBI CTAG 3 cut(s) 98, 215, 456
GlaI GCGC 2 cut(s) 147, 312
GluI GCNGC 5 cut(s) 235, 246, 582, 806, 818
GsuI CTGGAG 1 cut(s) 958
HaeII RGCGCY 1 cut(s) 149
HaeIII GGCC 4 cut(s) 5, 45, 442, 827
HapII CCGG 8 cut(s) 87, 281, 394, 587, 598, 828, 853, 976
HgaI GACGC 1 cut(s) 328
HhaI GCGC 2 cut(s) 148, 313
Hin1I GRCGYC 1 cut(s) 320
Hin1II CATG 7 cut(s) 203, 211, 279, 565, 869, 960, 987
Hin6I GCGC 2 cut(s) 146, 311
HinP1I GCGC 2 cut(s) 146, 311
HinfI GANTC 4 cut(s) 386, 459, 512, 971
HpaII CCGG 8 cut(s) 87, 281, 394, 587, 598, 828, 853, 976
HphI GGTGA 3 cut(s) 67, 842, 890
Hpy166II GTNNAC 3 cut(s) 348, 559, 738
Hpy188I TCNGA 5 cut(s) 158, 181, 391, 483, 517
Hpy188III TCNNGA 3 cut(s) 370, 1032, 1043
Hpy8I GTNNAC 3 cut(s) 348, 559, 738
Hpy99I CGWCG 3 cut(s) 322, 995, 1033
HpyAV CCTTC 7 cut(s) 137, 163, 488, 739, 884, 888, 940
HpyCH4III ACNGT 1 cut(s) 991
HpyCH4IV ACGT 4 cut(s) 350, 374, 496, 659
HpyCH4V TGCA 5 cut(s) 265, 584, 769, 934, 987
HpyF10VI GCNNNNNNNGC 4 cut(s) 281, 319, 781, 814
HpyF3I CTNAG 1 cut(s) 871
HpySE526I ACGT 4 cut(s) 350, 374, 496, 659
Hsp92I GRCGYC 1 cut(s) 320
Hsp92II CATG 7 cut(s) 203, 211, 279, 565, 869, 960, 987
HspAI GCGC 2 cut(s) 146, 311
Kzo9I GATC 4 cut(s) 436, 847, 994, 1015
LmnI GCTCC 3 cut(s) 182, 903, 939
Lsp1109I GCAGC 3 cut(s) 232, 568, 804
LweI GCATC 2 cut(s) 204, 208
MaeI CTAG 3 cut(s) 98, 215, 456
MaeII ACGT 4 cut(s) 350, 374, 496, 659
MaeIII GTNAC 2 cut(s) 638, 878
MalI GATC 4 cut(s) 438, 849, 996, 1017
MbiI CCGCTC 1 cut(s) 942
MboI GATC 4 cut(s) 436, 847, 994, 1015
MboII GAAGA 6 cut(s) 55, 127, 418, 578, 667, 681
MhlI GDGCHC 1 cut(s) 1009
MluCI AATT 3 cut(s) 223, 448, 604
MlyI GAGTC 2 cut(s) 506, 965
MmeI TCCRAC 2 cut(s) 44, 948
MroXI GAANNNNTTC 1 cut(s) 659
MslI CAYNNNNRTG 2 cut(s) 634, 695
MspI CCGG 8 cut(s) 87, 281, 394, 587, 598, 828, 853, 976
MspR9I CCNGG 6 cut(s) 281, 395, 599, 644, 915, 976
Mva1269I GAATGC 1 cut(s) 90
MvaI CCWGG 2 cut(s) 644, 915
MvnI CGCG 3 cut(s) 234, 311, 402
MwoI GCNNNNNNNGC 4 cut(s) 281, 319, 781, 814
NciI CCSGG 4 cut(s) 281, 395, 599, 976
NcoI CCATGG 1 cut(s) 956
NdeII GATC 4 cut(s) 436, 847, 994, 1015
NlaIII CATG 7 cut(s) 203, 211, 279, 565, 869, 960, 987
NlaIV GGNNCC 5 cut(s) 178, 860, 905, 919, 1008
NmeAIII GCCGAG 1 cut(s) 251
NmuCI GTSAC 2 cut(s) 638, 878
NspI RCATGY 1 cut(s) 279
OliI CACNNNNGTG 1 cut(s) 695
PaeI GCATGC 1 cut(s) 279
PctI GAATGC 1 cut(s) 90
PdmI GAANNNNTTC 1 cut(s) 659
PfeI GAWTC 2 cut(s) 386, 459
PflMI CCANNNNNTGG 1 cut(s) 549
PfoI TCCNGGA 1 cut(s) 974
PinAI ACCGGT 1 cut(s) 852
PkrI GCNGC 5 cut(s) 236, 247, 583, 807, 819
PleI GAGTC 2 cut(s) 506, 965
PpsI GAGTC 2 cut(s) 506, 965
Psp6I CCWGG 2 cut(s) 642, 913
PspGI CCWGG 2 cut(s) 642, 913
PspN4I GGNNCC 5 cut(s) 178, 860, 905, 919, 1008
PspPI GGNCC 3 cut(s) 391, 517, 917
RsaI GTAC 1 cut(s) 16
RsaNI GTAC 1 cut(s) 15
RseI CAYNNNNRTG 2 cut(s) 634, 695
Rsr2I CGGWCCG 1 cut(s) 391
RsrII CGGWCCG 1 cut(s) 391
SatI GCNGC 5 cut(s) 235, 246, 582, 806, 818
Sau3AI GATC 4 cut(s) 436, 847, 994, 1015
Sau96I GGNCC 3 cut(s) 391, 517, 917
ScaI AGTACT 1 cut(s) 16
SchI GAGTC 2 cut(s) 506, 965
ScrFI CCNGG 6 cut(s) 281, 395, 599, 644, 915, 976
SduI GDGCHC 1 cut(s) 1009
SfaNI GCATC 2 cut(s) 204, 208
SgrAI CRCCGGYG 1 cut(s) 852
SinI GGWCC 3 cut(s) 391, 517, 917
SmiMI CAYNNNNRTG 2 cut(s) 634, 695
SphI GCATGC 1 cut(s) 279
Sse9I AATT 3 cut(s) 223, 448, 604
SsiI CCGC 6 cut(s) 188, 234, 309, 402, 806, 942
SspI AATATT 1 cut(s) 593
SspMI CTAG 3 cut(s) 98, 215, 456
StyD4I CCNGG 6 cut(s) 279, 393, 597, 642, 913, 974
StyI CCWWGG 4 cut(s) 40, 97, 664, 956
TaaI ACNGT 1 cut(s) 991
TaiI ACGT 4 cut(s) 353, 377, 499, 662
TaqI TCGA 3 cut(s) 653, 993, 1031
TasI AATT 3 cut(s) 223, 448, 604
TatI WGTACW 1 cut(s) 14
TauI GCSGC 2 cut(s) 237, 808
TfiI GAWTC 2 cut(s) 386, 459
TscAI CASTG 1 cut(s) 941
TseFI GTSAC 2 cut(s) 638, 878
TseI GCWGC 3 cut(s) 245, 581, 817
Tsp45I GTSAC 2 cut(s) 638, 878
TspDTI ATGAA 1 cut(s) 461
TspGWI ACGGA 1 cut(s) 128
TspRI CASTG 1 cut(s) 941
Van91I CCANNNNNTGG 1 cut(s) 549
VpaK11BI GGWCC 3 cut(s) 391, 517, 917
XapI RAATTY 1 cut(s) 604
XceI RCATGY 1 cut(s) 279
XmaJI CCTAGG 1 cut(s) 97
XmiI GTMKAC 2 cut(s) 347, 737
XmnI GAANNNNTTC 1 cut(s) 659
XspI CTAG 3 cut(s) 98, 215, 456
ZrmI AGTACT 1 cut(s) 16
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.