FvH4_2g40650

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
28932729 .. 28935959
3231 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g40650.t1

Sequence Viewer

Length: 1551 bp
ATGGCCACCCTCCACCAAATCCTCCCAGAACTCCAATCAACGCCCTTTGCCATCCCTATTGCTCTTGCCGCTCTGTCTTGGCTCTTCTTGTATTACATCAGAGTTTCATACTTTACCAACAACAACAAGAGTGTTCATGCCAAGCTGCCTCCCGTACCAGTGGTTCCTGGGCTGCCGGTGATCGGAAATCTGCTGCAACTCAAGGAGAAGAAACCATACAAGACTTTCACGAGGTGGGCTGAGCAGTATGGCCCCATCTATTCCATCAGGACCGGTGCTTCCACCATGGTCGTTCTTAATACCTCCGAAGTTGCCAAAGAGGCCATGGTGACCAGATATTCATCCATCTCAACCAGAAAGCTATCAAATGCACTGAAGATTCTTACTGCTGATAAATGTATGGTTGCAATAAGTGACTACAACGATTTTCACAAGATGATAAAGCGATACATACTTGCAAATGTTCTTGGACCCAGAGCTCAGAAGCGACACCGGAGCAACAGAGATACTTTGAGAGCAAATGTCTTGAGCAAGCTACATTCTCATGTAAAGAAGTCTCCTCAAGAAGCTGTGAATTTCAGAAAAGTTTTTGAGTCGGAACTCTTTGGAATTGCTGTGAAGCAGGCCTTTGGAAAGGACATAGAAAAACCCATTTATGTGGAGGAATTTGGCACAACACTTTCAAAGGATGAGATCTTCAAGATTCTAGTGCTTGATATAATGGAGGGTGCAATTGAGGTTGATTGGAGAGATTTTTTCCCTTACCTGAGATGGATTCCTAATAAGACCATGGAGACAAAAATTCAGCAACTGTATTCCCGCAGGAAAGCAGTGATGACTGCTCTGATCAACGAGCAGAAGAAGCGAATTGCTTCAGGAGAGGAAATCAATTGTTATATCGACTTCTTGCTTTCTGAAGGGAAAACACTGACAATGGACCAAATAACAATGTTGCTTTGGGAGACTATAATTGAAACAGCAGATACTACAATGGTTACAACAGAATGGGCTATGTATGAAATTGCTAAAAATCCTAAGCAACAGGATCGTCTCTATCAAGAGATGCAAAAGGTATGTGGATCGGAGATGGTGACAGAGGAACACTTGTCCAGACTGCCATACCTGAATGCAGTTTTCCATGAAACTCTAAGGAAGCACAGTCCAGCTGCATTAGTTCCTTTAAGATATGCACATGAAGACACCCAACTAGGAGGTTACTACCTTCCAGCTGGAACTGAGATTGCAATAAACATATACGGGTGTAACATGGACAAACATCAATGGGAAAGCCCCGAGGAATGGAAGCCAGAGAGATTTCTAGACCCGAAATATGATCCAATGGATTTGTACAAAACCATGTCTTTTGGGGCAGGAAAAAGGGCATGTGCCGGTTCCCTCCAGGCAATGTTAATAGCGTGCCCGACGATTGGTAGGCTGGTGCAGGAGTTTGAGTGGAAGCTTAGAGCTGGAGAAGAAGAAAATGTAGATACTGTCGGGCTCACCACTCACAAACGCGATCCAATGCACGCAATCCTGAAGCCGAGGAGTTAG

Protein Analysis

517

Amino Acids

59.23

Weight (kDa)

8.88

Isoelectric Point (pI)

49.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 55 - 497 4.7e-77 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 71
AccII CGCG 1 cut(s) 1515
AciI CCGC 2 cut(s) 69, 820
AclWI GGATC 4 cut(s) 1053, 1087, 1328, 1511
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 574, 665, 801
AcuI CTGAAG 3 cut(s) 395, 858, 936
AdeI CACNNNGTG 1 cut(s) 234
AfaI GTAC 2 cut(s) 156, 1349
AfiI CCNNNNNNNGG 3 cut(s) 182, 1299, 1427
AgeI ACCGGT 1 cut(s) 272
AgsI TTSAA 3 cut(s) 684, 700, 974
AjnI CCWGG 2 cut(s) 166, 1398
AluBI AGCT 9 cut(s) 145, 361, 479, 535, 569, 1166, 1229, 1459, 1466
AluI AGCT 9 cut(s) 145, 361, 479, 535, 569, 1166, 1229, 1459, 1466
Alw21I GWGCWC 1 cut(s) 481
Alw26I GTCTC 4 cut(s) 561, 788, 956, 1055
AlwI GGATC 4 cut(s) 1053, 1087, 1328, 1511
AlwNI CAGNNNCTG 1 cut(s) 811
Ama87I CYCGRG 1 cut(s) 1292
AoxI GGCC 4 cut(s) 3, 250, 321, 624
ApeKI GCWGC 4 cut(s) 145, 172, 193, 1166
ApoI RAATTY 3 cut(s) 574, 665, 801
AsiGI ACCGGT 1 cut(s) 272
Asp700I GAANNNNTTC 1 cut(s) 871
AspS9I GGNCC 4 cut(s) 251, 270, 470, 937
AsuHPI GGTGA 4 cut(s) 190, 340, 1102, 1492
AvaI CYCGRG 1 cut(s) 1292
AvaII GGWCC 3 cut(s) 270, 470, 937
BaeGI GKGCMC 1 cut(s) 1421
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 2 cut(s) 481, 1500
BarI GAAGNNNNNNTAC 2 cut(s) 200, 232
BauI CACGAG 1 cut(s) 229
BbsI GAAGAC 1 cut(s) 1203
Bbv12I GWGCWC 1 cut(s) 481
BbvI GCAGC 4 cut(s) 132, 159, 180, 1153
BccI CCATC 6 cut(s) 59, 263, 272, 353, 765, 1081
BcgI CGANNNNNNTGC 2 cut(s) 1028, 1062
BciT130I CCWGG 2 cut(s) 168, 1400
BclI TGATCA 1 cut(s) 846
BcoDI GTCTC 4 cut(s) 561, 788, 956, 1055
BfaI CTAG 3 cut(s) 707, 1208, 1319
BglI GCCNNNNNGGC 1 cut(s) 320
BglII AGATCT 1 cut(s) 693
BisI GCNGC 5 cut(s) 69, 146, 173, 194, 1167
BlpI GCTNAGC 1 cut(s) 240
BlsI GCNGC 5 cut(s) 70, 147, 174, 195, 1168
Bme1390I CCNGG 2 cut(s) 168, 1400
Bme18I GGWCC 3 cut(s) 270, 470, 937
BmeT110I CYCGRG 1 cut(s) 1292
BmgT120I GGNCC 4 cut(s) 251, 270, 470, 937
BmiI GGNNCC 4 cut(s) 165, 253, 472, 1393
BmrFI CCNGG 2 cut(s) 168, 1400
BmsI GCATC 1 cut(s) 1053
BpiI GAAGAC 1 cut(s) 1203
BpmI CTGGAG 2 cut(s) 1382, 1488
Bpu10I CCTNAGC 1 cut(s) 1035
Bpu1102I GCTNAGC 1 cut(s) 240
BpuEI CTTGAG 3 cut(s) 185, 546, 547
BsaBI GATNNNNATC 1 cut(s) 340
BsaJI CCNNGG 6 cut(s) 167, 285, 324, 789, 1293, 1541
BsaWI WCCGGW 2 cut(s) 272, 492
BsaXI ACNNNNNCTCC 2 cut(s) 1436, 1466
Bsc4I CCNNNNNNNGG 3 cut(s) 182, 1299, 1427
Bse118I RCCGGY 3 cut(s) 175, 272, 1388
Bse1I ACTGG 1 cut(s) 158
Bse3DI GCAATG 1 cut(s) 1410
Bse8I GATNNNNATC 1 cut(s) 340
BseBI CCWGG 2 cut(s) 168, 1400
BseDI CCNNGG 6 cut(s) 167, 285, 324, 789, 1293, 1541
BseGI GGATG 3 cut(s) 51, 341, 694
BseJI GATNNNNATC 1 cut(s) 340
BseLI CCNNNNNNNGG 3 cut(s) 182, 1299, 1427
BseMI GCAATG 1 cut(s) 1410
BseMII CTCAG 4 cut(s) 231, 494, 758, 1227
BseNI ACTGG 1 cut(s) 158
BseRI GAGGAG 1 cut(s) 549
BseSI GKGCMC 1 cut(s) 1421
BseXI GCAGC 4 cut(s) 132, 159, 180, 1153
BsgI GTGCAG 1 cut(s) 1460
Bsh1236I CGCG 1 cut(s) 1515
BshFI GGCC 4 cut(s) 5, 252, 323, 626
BshTI ACCGGT 1 cut(s) 272
BsiHKAI GWGCWC 1 cut(s) 481
BsiHKCI CYCGRG 1 cut(s) 1292
BsiSI CCGG 4 cut(s) 176, 273, 493, 1389
BslI CCNNNNNNNGG 3 cut(s) 182, 1299, 1427
BsmAI GTCTC 4 cut(s) 561, 788, 956, 1055
BsmBI CGTCTC 1 cut(s) 1055
BsmI GAATGC 1 cut(s) 1132
BsnI GGCC 4 cut(s) 5, 252, 323, 626
BsoBI CYCGRG 1 cut(s) 1292
Bsp1286I GDGCHC 3 cut(s) 481, 1421, 1500
Bsp1407I TGTACA 1 cut(s) 1347
Bsp143I GATC 7 cut(s) 180, 693, 846, 1045, 1079, 1333, 1516
Bsp1720I GCTNAGC 1 cut(s) 240
Bsp19I CCATGG 3 cut(s) 285, 324, 789
BspACI CCGC 2 cut(s) 69, 820
BspANI GGCC 4 cut(s) 5, 252, 323, 626
BspCNI CTCAG 4 cut(s) 232, 493, 759, 1228
BspFNI CGCG 1 cut(s) 1515
BspLI GGNNCC 4 cut(s) 165, 253, 472, 1393
BspPI GGATC 4 cut(s) 1053, 1087, 1328, 1511
BspQI GCTCTTC 1 cut(s) 89
BsrBI CCGCTC 1 cut(s) 71
BsrDI GCAATG 1 cut(s) 1410
BsrFI RCCGGY 3 cut(s) 175, 272, 1388
BsrGI TGTACA 1 cut(s) 1347
BsrI ACTGG 1 cut(s) 158
BssAI RCCGGY 3 cut(s) 175, 272, 1388
BssECI CCNNGG 6 cut(s) 167, 285, 324, 789, 1293, 1541
BssMI GATC 7 cut(s) 180, 693, 846, 1045, 1079, 1333, 1516
BssSI CACGAG 1 cut(s) 229
BssT1I CCWWGG 3 cut(s) 285, 324, 789
Bst2BI CACGAG 1 cut(s) 229
Bst2UI CCWGG 2 cut(s) 168, 1400
Bst4CI ACNGT 3 cut(s) 813, 1160, 1492
Bst6I CTCTTC 1 cut(s) 89
BstAUI TGTACA 1 cut(s) 1347
BstC8I GCNNGC 4 cut(s) 533, 624, 1417, 1527
BstDEI CTNAG 7 cut(s) 240, 480, 767, 1035, 1148, 1236, 1460
BstDSI CCRYGG 3 cut(s) 285, 324, 789
BstEII GGTNACC 1 cut(s) 328
BstF5I GGATG 3 cut(s) 51, 341, 694
BstFNI CGCG 1 cut(s) 1515
BstKTI GATC 7 cut(s) 183, 696, 849, 1048, 1082, 1336, 1519
BstMAI GTCTC 4 cut(s) 561, 788, 956, 1055
BstMBI GATC 7 cut(s) 180, 693, 846, 1045, 1079, 1333, 1516
BstMWI GCNNNNNNNGC 3 cut(s) 68, 320, 862
BstNI CCWGG 2 cut(s) 168, 1400
BstNSI RCATGY 1 cut(s) 1386
BstPI GGTNACC 1 cut(s) 328
BstSCI CCNGG 2 cut(s) 166, 1398
BstSLI GKGCMC 1 cut(s) 1421
BstUI CGCG 1 cut(s) 1515
BstV1I GCAGC 4 cut(s) 132, 159, 180, 1153
BstV2I GAAGAC 1 cut(s) 1203
BstX2I RGATCY 1 cut(s) 693
BstXI CCANNNNNNTGG 1 cut(s) 658
BstYI RGATCY 1 cut(s) 693
BsuRI GGCC 4 cut(s) 5, 252, 323, 626
BtgI CCRYGG 3 cut(s) 285, 324, 789
BtsCI GGATG 3 cut(s) 51, 341, 694
BtsI GCAGTG 1 cut(s) 837
BtsIMutI CAGTG 4 cut(s) 165, 371, 837, 926
Cac8I GCNNGC 4 cut(s) 533, 624, 1417, 1527
CaiI CAGNNNCTG 1 cut(s) 811
Cfr10I RCCGGY 3 cut(s) 175, 272, 1388
Cfr13I GGNCC 4 cut(s) 251, 270, 470, 937
Csp6I GTAC 2 cut(s) 155, 1348
CspAI ACCGGT 1 cut(s) 272
CviQI GTAC 2 cut(s) 155, 1348
DdeI CTNAG 7 cut(s) 240, 480, 767, 1035, 1148, 1236, 1460
DpnI GATC 7 cut(s) 182, 695, 848, 1047, 1081, 1335, 1518
DpnII GATC 7 cut(s) 180, 693, 846, 1045, 1079, 1333, 1516
DraIII CACNNNGTG 1 cut(s) 234
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 89
EarI CTCTTC 1 cut(s) 89
Ecl136II GAGCTC 1 cut(s) 479
Eco130I CCWWGG 3 cut(s) 285, 324, 789
Eco147I AGGCCT 1 cut(s) 626
Eco24I GRGCYC 2 cut(s) 481, 1500
Eco47I GGWCC 3 cut(s) 270, 470, 937
Eco53kI GAGCTC 1 cut(s) 479
Eco57I CTGAAG 3 cut(s) 395, 858, 936
Eco88I CYCGRG 1 cut(s) 1292
Eco91I GGTNACC 1 cut(s) 328
EcoICRI GAGCTC 1 cut(s) 479
EcoO65I GGTNACC 1 cut(s) 328
EcoRII CCWGG 2 cut(s) 166, 1398
EcoT14I CCWWGG 3 cut(s) 285, 324, 789
EcoT38I GRGCYC 2 cut(s) 481, 1500
ErhI CCWWGG 3 cut(s) 285, 324, 789
Esp3I CGTCTC 1 cut(s) 1055
FalI AAGNNNNNCTT 2 cut(s) 611, 643
FauI CCCGC 1 cut(s) 827
FbaI TGATCA 1 cut(s) 846
Fnu4HI GCNGC 5 cut(s) 69, 146, 173, 194, 1167
FokI GGATG 3 cut(s) 38, 328, 701
FriOI GRGCYC 2 cut(s) 481, 1500
Fsp4HI GCNGC 5 cut(s) 69, 146, 173, 194, 1167
FspBI CTAG 3 cut(s) 707, 1208, 1319
GluI GCNGC 5 cut(s) 69, 146, 173, 194, 1167
GsuI CTGGAG 2 cut(s) 1382, 1488
HaeIII GGCC 4 cut(s) 5, 252, 323, 626
HapII CCGG 4 cut(s) 176, 273, 493, 1389
HindIII AAGCTT 1 cut(s) 1457
HinfI GANTC 4 cut(s) 379, 593, 703, 775
HpaII CCGG 4 cut(s) 176, 273, 493, 1389
HphI GGTGA 4 cut(s) 190, 340, 1102, 1492
Hpy188I TCNGA 9 cut(s) 101, 185, 307, 483, 581, 598, 846, 916, 1084
Hpy99I CGWCG 1 cut(s) 1426
HpyAV CCTTC 2 cut(s) 911, 1232
HpyCH4III ACNGT 3 cut(s) 813, 1160, 1492
HpyF10VI GCNNNNNNNGC 3 cut(s) 68, 320, 862
HpyF3I CTNAG 7 cut(s) 240, 480, 767, 1035, 1148, 1236, 1460
Ksp22I TGATCA 1 cut(s) 846
Kzo9I GATC 7 cut(s) 180, 693, 846, 1045, 1079, 1333, 1516
LguI GCTCTTC 1 cut(s) 89
LmnI GCTCC 1 cut(s) 495
Lsp1109I GCAGC 4 cut(s) 132, 159, 180, 1153
LweI GCATC 1 cut(s) 1053
MaeI CTAG 3 cut(s) 707, 1208, 1319
MaeIII GTNAC 6 cut(s) 328, 413, 994, 1090, 1214, 1262
MalI GATC 7 cut(s) 182, 695, 848, 1047, 1081, 1335, 1518
MbiI CCGCTC 1 cut(s) 71
MboI GATC 7 cut(s) 180, 693, 846, 1045, 1079, 1333, 1516
MboII GAAGA 8 cut(s) 76, 220, 388, 688, 871, 1208, 1484, 1487
MfeI CAATTG 2 cut(s) 732, 889
MflI RGATCY 1 cut(s) 693
MhlI GDGCHC 3 cut(s) 481, 1421, 1500
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 9 cut(s) 574, 609, 665, 732, 801, 867, 889, 969, 1020
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 602
MmeI TCCRAC 1 cut(s) 576
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 1 cut(s) 871
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 297, 1181, 1409
MslI CAYNNNNRTG 2 cut(s) 543, 656
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 2 cut(s) 1166, 1229
MspI CCGG 4 cut(s) 176, 273, 493, 1389
MspR9I CCNGG 2 cut(s) 168, 1400
MunI CAATTG 2 cut(s) 732, 889
Mva1269I GAATGC 1 cut(s) 1132
MvaI CCWGG 2 cut(s) 168, 1400
MvnI CGCG 1 cut(s) 1515
MwoI GCNNNNNNNGC 3 cut(s) 68, 320, 862
NcoI CCATGG 3 cut(s) 285, 324, 789
NdeII GATC 7 cut(s) 180, 693, 846, 1045, 1079, 1333, 1516
NlaIV GGNNCC 4 cut(s) 165, 253, 472, 1393
NmuCI GTSAC 3 cut(s) 328, 413, 1090
NspI RCATGY 1 cut(s) 1386
PceI AGGCCT 1 cut(s) 626
PciSI GCTCTTC 1 cut(s) 89
PctI GAATGC 1 cut(s) 1132
PdmI GAANNNNTTC 1 cut(s) 871
PfeI GAWTC 3 cut(s) 379, 703, 775
PinAI ACCGGT 1 cut(s) 272
PkrI GCNGC 5 cut(s) 70, 147, 174, 195, 1168
PleI GAGTC 1 cut(s) 601
PpsI GAGTC 1 cut(s) 601
Psp124BI GAGCTC 1 cut(s) 481
Psp6I CCWGG 2 cut(s) 166, 1398
PspEI GGTNACC 1 cut(s) 328
PspGI CCWGG 2 cut(s) 166, 1398
PspN4I GGNNCC 4 cut(s) 165, 253, 472, 1393
PspPI GGNCC 4 cut(s) 251, 270, 470, 937
PsrI GAACNNNNNNTAC 2 cut(s) 147, 179
PstNI CAGNNNCTG 1 cut(s) 811
PsuI RGATCY 1 cut(s) 693
PvuII CAGCTG 2 cut(s) 1166, 1229
RsaI GTAC 2 cut(s) 156, 1349
RsaNI GTAC 2 cut(s) 155, 1348
RseI CAYNNNNRTG 2 cut(s) 543, 656
SacI GAGCTC 1 cut(s) 481
SapI GCTCTTC 1 cut(s) 89
SaqAI TTAA 3 cut(s) 297, 1181, 1409
SatI GCNGC 5 cut(s) 69, 146, 173, 194, 1167
Sau3AI GATC 7 cut(s) 180, 693, 846, 1045, 1079, 1333, 1516
Sau96I GGNCC 4 cut(s) 251, 270, 470, 937
SchI GAGTC 1 cut(s) 602
ScrFI CCNGG 2 cut(s) 168, 1400
SduI GDGCHC 3 cut(s) 481, 1421, 1500
SfaNI GCATC 1 cut(s) 1053
SinI GGWCC 3 cut(s) 270, 470, 937
SmiMI CAYNNNNRTG 2 cut(s) 543, 656
SmlI CTYRAG 3 cut(s) 200, 526, 561
SmoI CTYRAG 3 cut(s) 200, 526, 561
Sse9I AATT 9 cut(s) 574, 609, 665, 732, 801, 867, 889, 969, 1020
SseBI AGGCCT 1 cut(s) 626
SsiI CCGC 2 cut(s) 69, 820
SspMI CTAG 3 cut(s) 707, 1208, 1319
SstI GAGCTC 1 cut(s) 481
StuI AGGCCT 1 cut(s) 626
StyD4I CCNGG 2 cut(s) 166, 1398
StyI CCWWGG 3 cut(s) 285, 324, 789
TaaI ACNGT 3 cut(s) 813, 1160, 1492
TaqI TCGA 1 cut(s) 900
TasI AATT 9 cut(s) 574, 609, 665, 732, 801, 867, 889, 969, 1020
TatI WGTACW 1 cut(s) 1347
TauI GCSGC 1 cut(s) 71
TfiI GAWTC 3 cut(s) 379, 703, 775
Tru1I TTAA 3 cut(s) 297, 1181, 1409
Tru9I TTAA 3 cut(s) 297, 1181, 1409
TscAI CASTG 4 cut(s) 165, 378, 837, 933
TseFI GTSAC 3 cut(s) 328, 413, 1090
TseI GCWGC 4 cut(s) 145, 172, 193, 1166
Tsp45I GTSAC 3 cut(s) 328, 413, 1090
TspDTI ATGAA 6 cut(s) 96, 125, 330, 1032, 1155, 1209
TspRI CASTG 4 cut(s) 165, 378, 837, 933
VpaK11BI GGWCC 3 cut(s) 270, 470, 937
XapI RAATTY 3 cut(s) 574, 665, 801
XbaI TCTAGA 1 cut(s) 1318
XceI RCATGY 1 cut(s) 1386
XcmI CCANNNNNNNNNTGG 1 cut(s) 322
XmnI GAANNNNTTC 1 cut(s) 871
XspI CTAG 3 cut(s) 707, 1208, 1319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.