MD08G1040000.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
2951355 .. 2954537
3183 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1040000.v1.1.491

Sequence Viewer

Length: 1545 bp
ATGGAACCCATGATCCAGATTCTCCAAGGTTTCCAAGCAATGCCCTTTGCAGTCCCTGCTGCCATTGCTGCTCCGTCTCTGCTCTTCCTGTTATCTGCCAAAGATTTGGTCCACACAAAAAAAAAAGATTTTCCCGAACTCCCTTCAGTTCCAGCTGTGCCGGGGCTGCCTGTTGTGGGGAACTTGCTGCAGCTGAAGGAGAAGAAGCCGTACAAGACATTTACTAAGTGGGCTGAGGAGTACGGACCAATCTATTCTATCAGGACTGGTGCTTCCACCATGGTTGTTCTCAATTCAACTGATATTGCCAAAGAGGCCATGGTGACCAGATATTCGTCCATGTCCACGAAAAAGCTATCAAAGGCACTAAAGCTTCTCACTTTTGATAAATGTATGGTTGCAATAAGTGACTACAACGATTTTCACAAGATGATAAAACGATACATACTCACAAATGTTCTTGGAGTGAATGCTCAGAAGCGACACGGAAGCCACAGAGATACCATGAGGGAAAATATTGCTAGCCGATTGCATGCTCATGTAAAGAACTCTCCTCAAGAAGCTATAAATTTCAGAAAGATATTTGAGTCGGAACTCTTTGGAATTTCTTTGAAGCAAGCTATAGGTAAGAACATAGAAGACTCCATTTATGTGGAAGAGCTTGGTACTACATTATCAAGAGATGAGATCTTTAAGGTTCTAGTGCTTGACATAATGGAGGGTGCAATCGATGTTGATTGGAGAGACTTCTTCCCGTACCTGAGTTGGGTTCCTAATAAGACCTTTGAAAATAAAATTCAGACACTCTGTTGCCGCAGGAAAGCAGTAATGAATGCCCTGATCGAGGAGCAAAGGAAGCGAATTGCTTCAGGAGAGGAATTGGATTGTTATATCGACTACTTGCTTTCTGAAGCAAAAACGCTTACACCTGAGCAAATATCCATGTTGATTTGGGAAACGATTATCGAGACAGCGGATACTACATTGGTAACAACGGAGTGGGCTATGTATGAACTTGCGAAGGATCAGAAGCGACAGGACCGTCTCTTTGAAGAAATTCAAAATGTTTGTGGAACCGACAAGATTACTGAGGAACATTTGTCCCTGATGCCGTACCTGGGTGCTGTCTTCCACGAAACTTTAAGGAAGCACAGTCCAGCTCCTATAGTTCCTCTAAGATATGTGCACGAAGATACCCAATTAGGCGGTTACTATGTTCCTGTGGGAACAGAGATTGCCATTAACATATACGGGTGCAACATGGACAAGAACCAATGGGAAAGCCCCGAAGAATGGAAGCCAGAGAGGTTTTTGGATCCAAAATACGATCCGATGGATTTGTACAAGACCATGGCATTTGGAACCGGAAAGAGGGTGTGTGCCGGTTCACTTCAGGCAATGCTGATAGCGTGCACCACCATCGGAAGGTTGGTGCAGGAGTTCGAGTGGAAGCTGAGAGATGGAGAGGAAGAAAATGTGGACACTGTTGGGCTCACCACTCACAAACTCCATCCAATGCATGCAATCCTCAAACCAAGAAATTAG

Protein Analysis

515

Amino Acids

58.71

Weight (kDa)

6.27

Isoelectric Point (pI)

47.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 52 - 495 4.1e-77 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1041
AciI CCGC 3 cut(s) 814, 974, 1206
AclWI GGATC 5 cut(s) 7, 1032, 1310, 1322, 1323
AcsI RAATTY 4 cut(s) 568, 603, 795, 1056
AcuI CTGAAG 5 cut(s) 129, 215, 852, 930, 1376
AfaI GTAC 6 cut(s) 212, 242, 667, 758, 1115, 1343
AfiI CCNNNNNNNGG 7 cut(s) 176, 766, 844, 1118, 1293, 1371, 1425
AgsI TTSAA 5 cut(s) 297, 613, 788, 1052, 1061
AjnI CCWGG 1 cut(s) 1116
AloI GAACNNNNNNTCC 1 cut(s) 29
AluBI AGCT 9 cut(s) 155, 193, 355, 373, 563, 620, 661, 1160, 1453
AluI AGCT 9 cut(s) 155, 193, 355, 373, 563, 620, 661, 1160, 1453
Alw21I GWGCWC 2 cut(s) 1188, 1415
Alw26I GTCTC 4 cut(s) 81, 738, 962, 1049
Alw44I GTGCAC 2 cut(s) 1184, 1411
AlwI GGATC 5 cut(s) 7, 1032, 1310, 1322, 1323
AlwNI CAGNNNCTG 1 cut(s) 56
AoxI GGCC 1 cut(s) 315
ApaLI GTGCAC 2 cut(s) 1184, 1411
ApeKI GCWGC 5 cut(s) 59, 68, 166, 187, 190
ApoI RAATTY 4 cut(s) 568, 603, 795, 1056
ArsI GACNNNNNNTTYG 6 cut(s) 93, 125, 316, 348, 1031, 1063
Asp700I GAANNNNTTC 2 cut(s) 865, 1056
AspS9I GGNCC 3 cut(s) 109, 245, 1039
AsuC2I CCSGG 1 cut(s) 162
AsuHPI GGTGA 2 cut(s) 334, 1486
AsuNHI GCTAGC 1 cut(s) 521
AvaII GGWCC 3 cut(s) 109, 245, 1039
BaeGI GKGCMC 2 cut(s) 1188, 1415
BamHI GGATCC 1 cut(s) 1315
BanII GRGCYC 1 cut(s) 1494
BarI GAAGNNNNNNTAC 2 cut(s) 194, 226
BbsI GAAGAC 2 cut(s) 645, 1120
Bbv12I GWGCWC 2 cut(s) 1188, 1415
BbvCI CCTCAGC 1 cut(s) 234
BbvI GCAGC 5 cut(s) 46, 55, 153, 174, 202
BccI CCATC 4 cut(s) 1327, 1427, 1454, 1518
BceAI ACGGC 2 cut(s) 193, 1096
BcgI CGANNNNNNTGC 2 cut(s) 1402, 1436
BciT130I CCWGG 1 cut(s) 1118
BciVI GTATCC 1 cut(s) 970
BcnI CCSGG 1 cut(s) 162
BcoDI GTCTC 4 cut(s) 81, 738, 962, 1049
BfaI CTAG 2 cut(s) 522, 701
BfmI CTRYAG 3 cut(s) 188, 621, 1164
BfuI GTATCC 1 cut(s) 970
BglI GCCNNNNNGGC 1 cut(s) 314
BglII AGATCT 1 cut(s) 687
BisI GCNGC 6 cut(s) 60, 69, 167, 188, 191, 814
BlsI GCNGC 6 cut(s) 61, 70, 168, 189, 192, 815
Bme1390I CCNGG 2 cut(s) 162, 1118
Bme18I GGWCC 3 cut(s) 109, 245, 1039
BmgT120I GGNCC 3 cut(s) 109, 245, 1039
BmiI GGNNCC 5 cut(s) 6, 771, 1075, 1317, 1363
BmrFI CCNGG 2 cut(s) 162, 1118
BmsI GCATC 1 cut(s) 1098
BmtI GCTAGC 1 cut(s) 525
BpiI GAAGAC 2 cut(s) 645, 1120
Bpu10I CCTNAGC 2 cut(s) 234, 930
BpuEI CTTGAG 1 cut(s) 540
BpuMI CCSGG 1 cut(s) 162
Bsa29I ATCGAT 1 cut(s) 729
BsaJI CCNNGG 6 cut(s) 25, 161, 279, 318, 1117, 1350
BsaWI WCCGGW 1 cut(s) 1364
BsaXI ACNNNNNCTCC 2 cut(s) 1430, 1460
Bsc4I CCNNNNNNNGG 7 cut(s) 176, 766, 844, 1118, 1293, 1371, 1425
Bse118I RCCGGY 1 cut(s) 1382
Bse1I ACTGG 1 cut(s) 271
Bse3DI GCAATG 3 cut(s) 45, 63, 1404
BseBI CCWGG 1 cut(s) 1118
BseCI ATCGAT 1 cut(s) 729
BseDI CCNNGG 6 cut(s) 25, 161, 279, 318, 1117, 1350
BseGI GGATG 1 cut(s) 1510
BseLI CCNNNNNNNGG 7 cut(s) 176, 766, 844, 1118, 1293, 1371, 1425
BseMI GCAATG 3 cut(s) 45, 63, 1404
BseMII CTCAG 6 cut(s) 225, 488, 752, 921, 1080, 1445
BseNI ACTGG 1 cut(s) 271
BseRI GAGGAG 3 cut(s) 251, 543, 860
BseSI GKGCMC 2 cut(s) 1188, 1415
BseXI GCAGC 5 cut(s) 46, 55, 153, 174, 202
BsgI GTGCAG 1 cut(s) 1454
BshFI GGCC 1 cut(s) 317
BshVI ATCGAT 1 cut(s) 729
BsiHKAI GWGCWC 2 cut(s) 1188, 1415
BsiSI CCGG 3 cut(s) 161, 1365, 1383
BslFI GGGAC 2 cut(s) 38, 1087
BslI CCNNNNNNNGG 7 cut(s) 176, 766, 844, 1118, 1293, 1371, 1425
BsmAI GTCTC 4 cut(s) 81, 738, 962, 1049
BsmBI CGTCTC 2 cut(s) 81, 1049
BsmFI GGGAC 2 cut(s) 38, 1087
BsmI GAATGC 2 cut(s) 475, 838
BsnI GGCC 1 cut(s) 317
Bsp1286I GDGCHC 3 cut(s) 1188, 1415, 1494
Bsp1407I TGTACA 1 cut(s) 1341
Bsp143I GATC 6 cut(s) 12, 687, 840, 1024, 1315, 1327
Bsp19I CCATGG 3 cut(s) 279, 318, 1350
BspACI CCGC 3 cut(s) 814, 974, 1206
BspANI GGCC 1 cut(s) 317
BspCNI CTCAG 6 cut(s) 226, 487, 753, 922, 1081, 1446
BspDI ATCGAT 1 cut(s) 729
BspLI GGNNCC 5 cut(s) 6, 771, 1075, 1317, 1363
BspMAI CTGCAG 1 cut(s) 192
BspOI GCTAGC 1 cut(s) 525
BspPI GGATC 5 cut(s) 7, 1032, 1310, 1322, 1323
BspQI GCTCTTC 2 cut(s) 89, 651
BsrDI GCAATG 3 cut(s) 45, 63, 1404
BsrFI RCCGGY 1 cut(s) 1382
BsrGI TGTACA 1 cut(s) 1341
BsrI ACTGG 1 cut(s) 271
BssAI RCCGGY 1 cut(s) 1382
BssECI CCNNGG 6 cut(s) 25, 161, 279, 318, 1117, 1350
BssMI GATC 6 cut(s) 12, 687, 840, 1024, 1315, 1327
BssT1I CCWWGG 4 cut(s) 25, 279, 318, 1350
Bst2UI CCWGG 1 cut(s) 1118
Bst4CI ACNGT 3 cut(s) 1043, 1154, 1486
Bst6I CTCTTC 2 cut(s) 89, 651
BstAPI GCANNNNNTGC 1 cut(s) 56
BstAUI TGTACA 1 cut(s) 1341
BstC8I GCNNGC 5 cut(s) 523, 534, 618, 1411, 1521
BstDEI CTNAG 8 cut(s) 225, 234, 474, 761, 930, 1089, 1175, 1454
BstDSI CCRYGG 3 cut(s) 279, 318, 1350
BstEII GGTNACC 1 cut(s) 322
BstENI CCTNNNNNAGG 1 cut(s) 842
BstF5I GGATG 1 cut(s) 1510
BstKTI GATC 6 cut(s) 15, 690, 843, 1027, 1318, 1330
BstMAI GTCTC 4 cut(s) 81, 738, 962, 1049
BstMBI GATC 6 cut(s) 12, 687, 840, 1024, 1315, 1327
BstMWI GCNNNNNNNGC 6 cut(s) 56, 65, 68, 166, 314, 856
BstNI CCWGG 1 cut(s) 1118
BstNSI RCATGY 2 cut(s) 536, 1523
BstPI GGTNACC 1 cut(s) 322
BstSCI CCNGG 2 cut(s) 160, 1116
BstSFI CTRYAG 3 cut(s) 188, 621, 1164
BstSLI GKGCMC 2 cut(s) 1188, 1415
BstV1I GCAGC 5 cut(s) 46, 55, 153, 174, 202
BstV2I GAAGAC 2 cut(s) 645, 1120
BstX2I RGATCY 2 cut(s) 687, 1315
BstXI CCANNNNNNTGG 2 cut(s) 106, 652
BstYI RGATCY 2 cut(s) 687, 1315
Bsu15I ATCGAT 1 cut(s) 729
BsuI GTATCC 1 cut(s) 970
BsuRI GGCC 1 cut(s) 317
BsuTUI ATCGAT 1 cut(s) 729
BtgI CCRYGG 3 cut(s) 279, 318, 1350
BtsCI GGATG 1 cut(s) 1510
BtsIMutI CAGTG 1 cut(s) 1482
Cac8I GCNNGC 5 cut(s) 523, 534, 618, 1411, 1521
CaiI CAGNNNCTG 1 cut(s) 56
Cfr10I RCCGGY 1 cut(s) 1382
Cfr13I GGNCC 3 cut(s) 109, 245, 1039
ClaI ATCGAT 1 cut(s) 729
Csp6I GTAC 6 cut(s) 211, 241, 666, 757, 1114, 1342
CspCI CAANNNNNGTGG 2 cut(s) 265, 300
CviQI GTAC 6 cut(s) 211, 241, 666, 757, 1114, 1342
DdeI CTNAG 8 cut(s) 225, 234, 474, 761, 930, 1089, 1175, 1454
DpnI GATC 6 cut(s) 14, 689, 842, 1026, 1317, 1329
DpnII GATC 6 cut(s) 12, 687, 840, 1024, 1315, 1327
DrdI GACNNNNNNGTC 1 cut(s) 1041
DseDI GACNNNNNNGTC 1 cut(s) 1041
Eam1104I CTCTTC 2 cut(s) 89, 651
EarI CTCTTC 2 cut(s) 89, 651
Eco130I CCWWGG 4 cut(s) 25, 279, 318, 1350
Eco24I GRGCYC 1 cut(s) 1494
Eco47I GGWCC 3 cut(s) 109, 245, 1039
Eco57I CTGAAG 5 cut(s) 129, 215, 852, 930, 1376
Eco91I GGTNACC 1 cut(s) 322
EcoNI CCTNNNNNAGG 1 cut(s) 842
EcoO65I GGTNACC 1 cut(s) 322
EcoRII CCWGG 1 cut(s) 1116
EcoT14I CCWWGG 4 cut(s) 25, 279, 318, 1350
EcoT22I ATGCAT 1 cut(s) 1521
EcoT38I GRGCYC 1 cut(s) 1494
ErhI CCWWGG 4 cut(s) 25, 279, 318, 1350
Esp3I CGTCTC 2 cut(s) 81, 1049
FaqI GGGAC 2 cut(s) 38, 1087
Fnu4HI GCNGC 6 cut(s) 60, 69, 167, 188, 191, 814
FokI GGATG 1 cut(s) 1497
FriOI GRGCYC 1 cut(s) 1494
Fsp4HI GCNGC 6 cut(s) 60, 69, 167, 188, 191, 814
FspBI CTAG 2 cut(s) 522, 701
GluI GCNGC 6 cut(s) 60, 69, 167, 188, 191, 814
HaeIII GGCC 1 cut(s) 317
HapII CCGG 3 cut(s) 161, 1365, 1383
HindIII AAGCTT 1 cut(s) 371
HinfI GANTC 3 cut(s) 19, 587, 641
HpaII CCGG 3 cut(s) 161, 1365, 1383
HphI GGTGA 2 cut(s) 334, 1486
Hpy166II GTNNAC 6 cut(s) 112, 345, 1186, 1388, 1413, 1480
Hpy188I TCNGA 8 cut(s) 477, 575, 592, 801, 910, 1029, 1332, 1424
Hpy188III TCNNGA 7 cut(s) 16, 134, 262, 557, 678, 870, 967
Hpy8I GTNNAC 6 cut(s) 112, 345, 1186, 1388, 1413, 1480
HpyAV CCTTC 4 cut(s) 153, 190, 1015, 1419
HpyCH4III ACNGT 3 cut(s) 1043, 1154, 1486
HpyF10VI GCNNNNNNNGC 6 cut(s) 56, 65, 68, 166, 314, 856
HpyF3I CTNAG 8 cut(s) 225, 234, 474, 761, 930, 1089, 1175, 1454
Kzo9I GATC 6 cut(s) 12, 687, 840, 1024, 1315, 1327
LguI GCTCTTC 2 cut(s) 89, 651
LmnI GCTCC 3 cut(s) 76, 847, 1165
Lsp1109I GCAGC 5 cut(s) 46, 55, 153, 174, 202
LweI GCATC 1 cut(s) 1098
MaeI CTAG 2 cut(s) 522, 701
MaeIII GTNAC 4 cut(s) 322, 407, 988, 1208
MalI GATC 6 cut(s) 14, 689, 842, 1026, 1317, 1329
MboI GATC 6 cut(s) 12, 687, 840, 1024, 1315, 1327
MflI RGATCY 2 cut(s) 687, 1315
MhlI GDGCHC 3 cut(s) 1188, 1415, 1494
MluCI AATT 9 cut(s) 292, 568, 603, 795, 861, 878, 1056, 1199, 1540
MlyI GAGTC 2 cut(s) 596, 635
MmeI TCCRAC 1 cut(s) 570
Mph1103I ATGCAT 1 cut(s) 1521
MroXI GAANNNNTTC 2 cut(s) 865, 1056
MseI TTAA 3 cut(s) 693, 1142, 1242
MslI CAYNNNNRTG 2 cut(s) 537, 650
MspA1I CMGCKG 3 cut(s) 155, 193, 974
MspI CCGG 3 cut(s) 161, 1365, 1383
MspR9I CCNGG 2 cut(s) 162, 1118
Mva1269I GAATGC 2 cut(s) 475, 838
MvaI CCWGG 1 cut(s) 1118
MwoI GCNNNNNNNGC 6 cut(s) 56, 65, 68, 166, 314, 856
NciI CCSGG 1 cut(s) 162
NcoI CCATGG 3 cut(s) 279, 318, 1350
NdeII GATC 6 cut(s) 12, 687, 840, 1024, 1315, 1327
NheI GCTAGC 1 cut(s) 521
NlaIV GGNNCC 5 cut(s) 6, 771, 1075, 1317, 1363
NmuCI GTSAC 2 cut(s) 322, 407
NsiI ATGCAT 1 cut(s) 1521
NspI RCATGY 2 cut(s) 536, 1523
PaeI GCATGC 2 cut(s) 536, 1523
PciSI GCTCTTC 2 cut(s) 89, 651
PctI GAATGC 2 cut(s) 475, 838
PdmI GAANNNNTTC 2 cut(s) 865, 1056
PfeI GAWTC 1 cut(s) 19
PkrI GCNGC 6 cut(s) 61, 70, 168, 189, 192, 815
PleI GAGTC 2 cut(s) 595, 635
PpsI GAGTC 2 cut(s) 595, 635
Psp6I CCWGG 1 cut(s) 1116
PspEI GGTNACC 1 cut(s) 322
PspGI CCWGG 1 cut(s) 1116
PspN4I GGNNCC 5 cut(s) 6, 771, 1075, 1317, 1363
PspPI GGNCC 3 cut(s) 109, 245, 1039
PstI CTGCAG 1 cut(s) 192
PstNI CAGNNNCTG 1 cut(s) 56
PsuI RGATCY 2 cut(s) 687, 1315
PvuII CAGCTG 2 cut(s) 155, 193
RsaI GTAC 6 cut(s) 212, 242, 667, 758, 1115, 1343
RsaNI GTAC 6 cut(s) 211, 241, 666, 757, 1114, 1342
RseI CAYNNNNRTG 2 cut(s) 537, 650
SapI GCTCTTC 2 cut(s) 89, 651
SaqAI TTAA 3 cut(s) 693, 1142, 1242
SatI GCNGC 6 cut(s) 60, 69, 167, 188, 191, 814
Sau3AI GATC 6 cut(s) 12, 687, 840, 1024, 1315, 1327
Sau96I GGNCC 3 cut(s) 109, 245, 1039
SchI GAGTC 2 cut(s) 596, 635
ScrFI CCNGG 2 cut(s) 162, 1118
SduI GDGCHC 3 cut(s) 1188, 1415, 1494
SfaNI GCATC 1 cut(s) 1098
SfcI CTRYAG 3 cut(s) 188, 621, 1164
SinI GGWCC 3 cut(s) 109, 245, 1039
SmiMI CAYNNNNRTG 2 cut(s) 537, 650
SmlI CTYRAG 1 cut(s) 555
SmoI CTYRAG 1 cut(s) 555
SphI GCATGC 2 cut(s) 536, 1523
Sse9I AATT 9 cut(s) 292, 568, 603, 795, 861, 878, 1056, 1199, 1540
SsiI CCGC 3 cut(s) 814, 974, 1206
SspI AATATT 1 cut(s) 517
SspMI CTAG 2 cut(s) 522, 701
StyD4I CCNGG 2 cut(s) 160, 1116
StyI CCWWGG 4 cut(s) 25, 279, 318, 1350
TaaI ACNGT 3 cut(s) 1043, 1154, 1486
TaqI TCGA 5 cut(s) 729, 843, 894, 966, 1443
TasI AATT 9 cut(s) 292, 568, 603, 795, 861, 878, 1056, 1199, 1540
TatI WGTACW 1 cut(s) 1341
TauI GCSGC 1 cut(s) 816
TfiI GAWTC 1 cut(s) 19
Tru1I TTAA 3 cut(s) 693, 1142, 1242
Tru9I TTAA 3 cut(s) 693, 1142, 1242
TscAI CASTG 1 cut(s) 1489
TseFI GTSAC 2 cut(s) 322, 407
TseI GCWGC 5 cut(s) 59, 68, 166, 187, 190
Tsp45I GTSAC 2 cut(s) 322, 407
TspDTI ATGAA 2 cut(s) 845, 1026
TspGWI ACGGA 4 cut(s) 63, 258, 501, 1010
TspRI CASTG 1 cut(s) 1489
VneI GTGCAC 2 cut(s) 1184, 1411
VpaK11BI GGWCC 3 cut(s) 109, 245, 1039
XagI CCTNNNNNAGG 1 cut(s) 842
XapI RAATTY 4 cut(s) 568, 603, 795, 1056
XceI RCATGY 2 cut(s) 536, 1523
XcmI CCANNNNNNNNNTGG 2 cut(s) 316, 1426
XmnI GAANNNNTTC 2 cut(s) 865, 1056
XspI CTAG 2 cut(s) 522, 701
Zsp2I ATGCAT 1 cut(s) 1521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.