MD15G1034700.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
2450592 .. 2454348
3757 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1034700.v1.1.491

Sequence Viewer

Length: 1512 bp
ATGTCCTTTGCCACCATTGTTGTGGTGGGTACTTTTTCTTTACTCTTCTTCCAATATTTCATCAAAGGATTCATCTTTACAAACAAGAAGGGATCATATGCCAAACTCCCTCCAGTCCCAGTGGTACCTGGGTTGCCGGTGGTAGGGAATTTGTTGCAGATGAAGGAGAAGAAGCCCTACAAGACATTTACAAATTGGGCTGAAACATACGGACCAATCTATTCTATCAGGACTGGTGCTTCCACTGTGGTTGTCCTCAATACCGCAGATGTGGCTCTAGAGGCTATGGTGACTAGACATTCGTCTATTTCATCGAAAAAGCTAACGACGCCAATAAAGAGCCTTTCTTTCGATGACTCTGTGATTGCATCATCGAACTACAACGACTTCCACAAGATGGGAAGACGTCACATGGCCCAAAGTATTCTTGGACCCAATGCTCAGAAGCGGCACCAGAACCACAGATATACCTTGAGAGAAAATGTGTCAAGCCAATTGCATGCTCATGTAAAAAAGTCTCCTAATGAAGCTGTGAATTTCAAGAAAGTGTTCGAGCCCGAACTCTTCGGACTTTCGTTGAAGCAGGCCTTGGGAAAGAACGTAGAAGGATCAATTTATGTGGAGGAGCTTGGAACTACTTTGTCAAGAAATGAGATTTTTGAGATTCTTGTAGCTGATGTGCTCAAGGGTGCCACTGAAACTGATTGGAGAGACTTCTTTCCTTATCTGAGATGGATTCCCAACAAGAACTTGGAAATGAAAATCCAGAATATCTGTTTCCGCAGGAAGGCAGTAATGAGTGTCCTGATTGAGGAGCAAATGAAACGAATTGCTTCCGGACAGGAGGTAAATTGTTTTCTGGACTACTTGCTTTGTGAAGGAAAAACGCTTACAACGGAGCAAATAACTGTTTCTGTTTGGGAGTCGATTCTTGAGGCAGCGGATACTACAGTGGTAACAATGGAATGGGCTATGTATGAACTTGCTAAGCATCCAAAACGACAGGAACGTCTGCACGAAGAAATCCAAAATGCTTGTGGATGCGACAAGGTTAGTGAGGAACACTTGTCCCAGCTGCCATACCTGAATGCTGTTTTCCACGAAACTTTGAGGAAGCACAGTCCAGTTCCAGTAGCTCTTACAAAATATGTTGATGAAGATACCCAATTAGGAGGTTACTATATCCCTGCTGGAACACAGATTGCTGTAAACTTGTACGGGTGTAACATGGACAAAAACAAATGGGATATACCAGAAGAATGGAAGCCAGAGAGATTTCTGGAGAAGGAAAAATGGGATCCAATGGAATTGCAGAAGACAATGGCATTTGGAGGTGGAAAGAGGGCGTGTGCTGGTTCTCTTCAGGCAATGCTAATAGTATGCACAACTATCGGAAGGTTGGTGCAGGAGTTTGAGTGGAGACTAAGAGAAGGAGACGAAGAAGAAGATACCGCTATCTTCACCAATCACAAACTCCATGCCATGCATGCAGTCATCAAACCCAGAAATTAG

Protein Analysis

504

Amino Acids

57.33

Weight (kDa)

7.99

Isoelectric Point (pI)

45.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 42 - 485 5.9e-79 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1008
AatII GACGTC 1 cut(s) 409
Acc65I GGTACC 1 cut(s) 124
AccB1I GGYRCC 3 cut(s) 124, 450, 689
AccB7I CCANNNNNTGG 1 cut(s) 397
AccIII TCCGGA 1 cut(s) 836
AciI CCGC 5 cut(s) 264, 448, 781, 941, 1452
AclWI GGATC 4 cut(s) 100, 616, 1292, 1305
AcsI RAATTY 2 cut(s) 148, 535
AcuI CTGAAG 1 cut(s) 1346
AcyI GRCGYC 2 cut(s) 329, 406
AfaI GTAC 3 cut(s) 31, 126, 1217
AfiI CCNNNNNNNGG 4 cut(s) 143, 397, 787, 811
AgsI TTSAA 2 cut(s) 541, 580
AjnI CCWGG 1 cut(s) 127
AjuI GAANNNNNNNTTGG 2 cut(s) 572, 604
AluBI AGCT 6 cut(s) 322, 530, 628, 674, 1075, 1136
AluI AGCT 6 cut(s) 322, 530, 628, 674, 1075, 1136
Alw21I GWGCWC 1 cut(s) 684
Alw26I GTCTC 4 cut(s) 522, 705, 1414, 1428
AlwI GGATC 4 cut(s) 100, 616, 1292, 1305
Aor13HI TCCGGA 1 cut(s) 836
AoxI GGCC 2 cut(s) 414, 585
ApeKI GCWGC 2 cut(s) 938, 1075
ApoI RAATTY 2 cut(s) 148, 535
ArsI GACNNNNNNTTYG 2 cut(s) 283, 315
Asp700I GAANNNNTTC 2 cut(s) 548, 832
Asp718I GGTACC 1 cut(s) 124
AspS9I GGNCC 3 cut(s) 212, 415, 431
AsuHPI GGTGA 2 cut(s) 301, 1453
AvaII GGWCC 2 cut(s) 212, 431
BaeI ACNNNNGTAYC 4 cut(s) 116, 149, 936, 969
BamHI GGATCC 1 cut(s) 1297
BanI GGYRCC 3 cut(s) 124, 450, 689
BanII GRGCYC 1 cut(s) 558
BarI GAAGNNNNNNTAC 2 cut(s) 161, 193
BbsI GAAGAC 2 cut(s) 409, 1322
Bbv12I GWGCWC 1 cut(s) 684
BbvI GCAGC 2 cut(s) 950, 1062
BccI CCATC 2 cut(s) 391, 726
BcgI CGANNNNNNTGC 2 cut(s) 1372, 1406
BciT130I CCWGG 1 cut(s) 129
BciVI GTATCC 1 cut(s) 937
BcoDI GTCTC 4 cut(s) 522, 705, 1414, 1428
BfaI CTAG 2 cut(s) 278, 294
BfmI CTRYAG 1 cut(s) 948
BfuI GTATCC 1 cut(s) 937
BisI GCNGC 3 cut(s) 449, 939, 1076
BlpI GCTNAGC 1 cut(s) 987
BlsI GCNGC 3 cut(s) 450, 940, 1077
Bme1390I CCNGG 1 cut(s) 129
Bme18I GGWCC 2 cut(s) 212, 431
BmgT120I GGNCC 3 cut(s) 212, 415, 431
BmiI GGNNCC 5 cut(s) 126, 433, 452, 691, 1299
BmrFI CCNGG 1 cut(s) 129
BmrI ACTGGG 1 cut(s) 113
BmsI GCATC 3 cut(s) 377, 1000, 1031
BmuI ACTGGG 1 cut(s) 113
BoxI GACNNNNGTC 1 cut(s) 301
BpiI GAAGAC 2 cut(s) 409, 1322
BpmI CTGGAG 2 cut(s) 96, 1301
Bpu1102I GCTNAGC 1 cut(s) 987
BpuEI CTTGAG 3 cut(s) 493, 668, 953
BsaHI GRCGYC 2 cut(s) 329, 406
BsaJI CCNNGG 2 cut(s) 128, 588
BsaWI WCCGGW 1 cut(s) 836
BsaXI ACNNNNNCTCC 2 cut(s) 1400, 1430
Bsc4I CCNNNNNNNGG 4 cut(s) 143, 397, 787, 811
Bse118I RCCGGY 1 cut(s) 136
Bse1I ACTGG 5 cut(s) 113, 119, 238, 1124, 1130
Bse3DI GCAATG 1 cut(s) 1374
BseAI TCCGGA 1 cut(s) 836
BseBI CCWGG 1 cut(s) 129
BseDI CCNNGG 2 cut(s) 128, 588
BseGI GGATG 2 cut(s) 991, 1046
BseLI CCNNNNNNNGG 4 cut(s) 143, 397, 787, 811
BseMI GCAATG 1 cut(s) 1374
BseMII CTCAG 2 cut(s) 455, 719
BseNI ACTGG 5 cut(s) 113, 119, 238, 1124, 1130
BseRI GAGGAG 2 cut(s) 638, 827
BseXI GCAGC 2 cut(s) 950, 1062
BseYI CCCAGC 1 cut(s) 1071
BsgI GTGCAG 2 cut(s) 998, 1424
BshFI GGCC 2 cut(s) 416, 587
BshNI GGYRCC 3 cut(s) 124, 450, 689
BsiHKAI GWGCWC 1 cut(s) 684
BsiSI CCGG 2 cut(s) 137, 837
BslFI GGGAC 2 cut(s) 101, 1054
BslI CCNNNNNNNGG 4 cut(s) 143, 397, 787, 811
BsmAI GTCTC 4 cut(s) 522, 705, 1414, 1428
BsmBI CGTCTC 1 cut(s) 1428
BsmFI GGGAC 2 cut(s) 101, 1054
BsmI GAATGC 1 cut(s) 1093
BsnI GGCC 2 cut(s) 416, 587
Bsp1286I GDGCHC 2 cut(s) 558, 684
Bsp13I TCCGGA 1 cut(s) 836
Bsp143I GATC 3 cut(s) 92, 608, 1297
Bsp1720I GCTNAGC 1 cut(s) 987
BspACI CCGC 5 cut(s) 264, 448, 781, 941, 1452
BspANI GGCC 2 cut(s) 416, 587
BspCNI CTCAG 2 cut(s) 454, 720
BspEI TCCGGA 1 cut(s) 836
BspLI GGNNCC 5 cut(s) 126, 433, 452, 691, 1299
BspPI GGATC 4 cut(s) 100, 616, 1292, 1305
BspT107I GGYRCC 3 cut(s) 124, 450, 689
BsrDI GCAATG 1 cut(s) 1374
BsrFI RCCGGY 1 cut(s) 136
BsrI ACTGG 5 cut(s) 113, 119, 238, 1124, 1130
BssAI RCCGGY 1 cut(s) 136
BssECI CCNNGG 2 cut(s) 128, 588
BssMI GATC 3 cut(s) 92, 608, 1297
BssNI GRCGYC 2 cut(s) 329, 406
BssT1I CCWWGG 1 cut(s) 588
Bst2UI CCWGG 1 cut(s) 129
Bst4CI ACNGT 4 cut(s) 247, 910, 952, 1121
Bst6I CTCTTC 3 cut(s) 50, 569, 1365
BstACI GRCGYC 2 cut(s) 329, 406
BstC8I GCNNGC 3 cut(s) 501, 585, 1488
BstDEI CTNAG 4 cut(s) 441, 728, 987, 1424
BstENI CCTNNNNNAGG 1 cut(s) 809
BstF5I GGATG 2 cut(s) 991, 1046
BstKTI GATC 3 cut(s) 95, 611, 1300
BstMAI GTCTC 4 cut(s) 522, 705, 1414, 1428
BstMBI GATC 3 cut(s) 92, 608, 1297
BstMWI GCNNNNNNNGC 4 cut(s) 272, 281, 328, 1487
BstNI CCWGG 1 cut(s) 129
BstNSI RCATGY 2 cut(s) 503, 1490
BstPAI GACNNNNGTC 1 cut(s) 301
BstSCI CCNGG 1 cut(s) 127
BstSFI CTRYAG 1 cut(s) 948
BstV1I GCAGC 2 cut(s) 950, 1062
BstV2I GAAGAC 2 cut(s) 409, 1322
BstX2I RGATCY 1 cut(s) 1297
BstXI CCANNNNNNTGG 2 cut(s) 22, 1260
BstYI RGATCY 1 cut(s) 1297
BsuI GTATCC 1 cut(s) 937
BsuRI GGCC 2 cut(s) 416, 587
BtsCI GGATG 2 cut(s) 991, 1046
BtsIMutI CAGTG 4 cut(s) 126, 243, 693, 957
Cac8I GCNNGC 3 cut(s) 501, 585, 1488
Cfr10I RCCGGY 1 cut(s) 136
Cfr13I GGNCC 3 cut(s) 212, 415, 431
CseI GACGC 1 cut(s) 337
Csp6I GTAC 3 cut(s) 30, 125, 1216
CspCI CAANNNNNGTGG 5 cut(s) 36, 232, 267, 600, 635
CviAII CATG 7 cut(s) 412, 500, 506, 1228, 1478, 1483, 1487
CviQI GTAC 3 cut(s) 30, 125, 1216
DdeI CTNAG 4 cut(s) 441, 728, 987, 1424
DpnI GATC 3 cut(s) 94, 610, 1299
DpnII GATC 3 cut(s) 92, 608, 1297
DrdI GACNNNNNNGTC 1 cut(s) 1008
DseDI GACNNNNNNGTC 1 cut(s) 1008
Eam1104I CTCTTC 3 cut(s) 50, 569, 1365
EarI CTCTTC 3 cut(s) 50, 569, 1365
Eco130I CCWWGG 1 cut(s) 588
Eco147I AGGCCT 1 cut(s) 587
Eco24I GRGCYC 1 cut(s) 558
Eco47I GGWCC 2 cut(s) 212, 431
Eco57I CTGAAG 1 cut(s) 1346
EcoNI CCTNNNNNAGG 1 cut(s) 809
EcoRII CCWGG 1 cut(s) 127
EcoT14I CCWWGG 1 cut(s) 588
EcoT22I ATGCAT 1 cut(s) 1488
EcoT38I GRGCYC 1 cut(s) 558
ErhI CCWWGG 1 cut(s) 588
Esp3I CGTCTC 1 cut(s) 1428
FaeI CATG 7 cut(s) 415, 503, 509, 1231, 1481, 1486, 1490
FalI AAGNNNNNCTT 2 cut(s) 572, 604
FaqI GGGAC 2 cut(s) 101, 1054
FatI CATG 7 cut(s) 411, 499, 505, 1227, 1477, 1482, 1486
FauNDI CATATG 1 cut(s) 97
Fnu4HI GCNGC 3 cut(s) 449, 939, 1076
FokI GGATG 2 cut(s) 978, 1053
FriOI GRGCYC 1 cut(s) 558
Fsp4HI GCNGC 3 cut(s) 449, 939, 1076
FspBI CTAG 2 cut(s) 278, 294
GluI GCNGC 3 cut(s) 449, 939, 1076
GsaI CCCAGC 1 cut(s) 1075
GsuI CTGGAG 2 cut(s) 96, 1301
HaeIII GGCC 2 cut(s) 416, 587
HapII CCGG 2 cut(s) 137, 837
HgaI GACGC 1 cut(s) 337
Hin1I GRCGYC 2 cut(s) 329, 406
Hin1II CATG 7 cut(s) 415, 503, 509, 1231, 1481, 1486, 1490
HinfI GANTC 6 cut(s) 69, 356, 664, 736, 923, 928
HpaII CCGG 2 cut(s) 137, 837
HphI GGTGA 2 cut(s) 301, 1453
Hpy166II GTNNAC 1 cut(s) 1210
Hpy188I TCNGA 4 cut(s) 444, 569, 729, 1394
Hpy8I GTNNAC 1 cut(s) 1210
Hpy99I CGWCG 1 cut(s) 331
HpyAV CCTTC 8 cut(s) 82, 157, 599, 781, 872, 1279, 1389, 1424
HpyCH4III ACNGT 4 cut(s) 247, 910, 952, 1121
HpyCH4IV ACGT 3 cut(s) 406, 600, 1009
HpyCH4V TGCA 9 cut(s) 157, 368, 499, 1015, 1312, 1383, 1405, 1486, 1490
HpyF10VI GCNNNNNNNGC 4 cut(s) 272, 281, 328, 1487
HpyF3I CTNAG 4 cut(s) 441, 728, 987, 1424
HpySE526I ACGT 3 cut(s) 406, 600, 1009
Hsp92I GRCGYC 2 cut(s) 329, 406
Hsp92II CATG 7 cut(s) 415, 503, 509, 1231, 1481, 1486, 1490
Kpn2I TCCGGA 1 cut(s) 836
KpnI GGTACC 1 cut(s) 128
Kzo9I GATC 3 cut(s) 92, 608, 1297
LmnI GCTCC 3 cut(s) 625, 814, 898
Lsp1109I GCAGC 2 cut(s) 950, 1062
LweI GCATC 3 cut(s) 377, 1000, 1031
MaeI CTAG 2 cut(s) 278, 294
MaeII ACGT 3 cut(s) 406, 600, 1009
MaeIII GTNAC 5 cut(s) 289, 407, 955, 1175, 1223
MalI GATC 3 cut(s) 94, 610, 1299
MboI GATC 3 cut(s) 92, 608, 1297
MfeI CAATTG 1 cut(s) 494
MflI RGATCY 1 cut(s) 1297
MhlI GDGCHC 2 cut(s) 558, 684
MlyI GAGTC 2 cut(s) 350, 932
Mph1103I ATGCAT 1 cut(s) 1488
MroI TCCGGA 1 cut(s) 836
MroXI GAANNNNTTC 2 cut(s) 548, 832
MslI CAYNNNNRTG 2 cut(s) 20, 504
MspA1I CMGCKG 2 cut(s) 941, 1075
MspI CCGG 2 cut(s) 137, 837
MspR9I CCNGG 1 cut(s) 129
MunI CAATTG 1 cut(s) 494
Mva1269I GAATGC 1 cut(s) 1093
MvaI CCWGG 1 cut(s) 129
MwoI GCNNNNNNNGC 4 cut(s) 272, 281, 328, 1487
NdeI CATATG 1 cut(s) 97
NdeII GATC 3 cut(s) 92, 608, 1297
NlaIII CATG 7 cut(s) 415, 503, 509, 1231, 1481, 1486, 1490
NlaIV GGNNCC 5 cut(s) 126, 433, 452, 691, 1299
NmuCI GTSAC 2 cut(s) 289, 407
NsiI ATGCAT 1 cut(s) 1488
NspI RCATGY 2 cut(s) 503, 1490
PaeI GCATGC 2 cut(s) 503, 1490
PceI AGGCCT 1 cut(s) 587
PcsI WCGNNNNNNNCGW 1 cut(s) 1006
PctI GAATGC 1 cut(s) 1093
PdmI GAANNNNTTC 2 cut(s) 548, 832
PfeI GAWTC 4 cut(s) 69, 664, 736, 928
PflMI CCANNNNNTGG 1 cut(s) 397
PkrI GCNGC 3 cut(s) 450, 940, 1077
PleI GAGTC 2 cut(s) 350, 931
PpsI GAGTC 2 cut(s) 350, 931
PshAI GACNNNNGTC 1 cut(s) 301
Psp6I CCWGG 1 cut(s) 127
PspFI CCCAGC 1 cut(s) 1071
PspGI CCWGG 1 cut(s) 127
PspN4I GGNNCC 5 cut(s) 126, 433, 452, 691, 1299
PspPI GGNCC 3 cut(s) 212, 415, 431
PsuI RGATCY 1 cut(s) 1297
PvuII CAGCTG 1 cut(s) 1075
RsaI GTAC 3 cut(s) 31, 126, 1217
RsaNI GTAC 3 cut(s) 30, 125, 1216
RseI CAYNNNNRTG 2 cut(s) 20, 504
SatI GCNGC 3 cut(s) 449, 939, 1076
Sau3AI GATC 3 cut(s) 92, 608, 1297
Sau96I GGNCC 3 cut(s) 212, 415, 431
SchI GAGTC 2 cut(s) 350, 932
ScrFI CCNGG 1 cut(s) 129
SduI GDGCHC 2 cut(s) 558, 684
SfaNI GCATC 3 cut(s) 377, 1000, 1031
SfcI CTRYAG 1 cut(s) 948
SinI GGWCC 2 cut(s) 212, 431
SmiMI CAYNNNNRTG 2 cut(s) 20, 504
SmlI CTYRAG 3 cut(s) 472, 683, 932
SmoI CTYRAG 3 cut(s) 472, 683, 932
SphI GCATGC 2 cut(s) 503, 1490
SseBI AGGCCT 1 cut(s) 587
SsiI CCGC 5 cut(s) 264, 448, 781, 941, 1452
SspI AATATT 1 cut(s) 56
SspMI CTAG 2 cut(s) 278, 294
StuI AGGCCT 1 cut(s) 587
StyD4I CCNGG 1 cut(s) 127
StyI CCWWGG 1 cut(s) 588
TaaI ACNGT 4 cut(s) 247, 910, 952, 1121
TaiI ACGT 3 cut(s) 409, 603, 1012
TaqI TCGA 5 cut(s) 314, 351, 374, 552, 926
TauI GCSGC 1 cut(s) 451
TfiI GAWTC 4 cut(s) 69, 664, 736, 928
TscAI CASTG 4 cut(s) 126, 250, 700, 957
TseFI GTSAC 2 cut(s) 289, 407
TseI GCWGC 2 cut(s) 938, 1075
Tsp45I GTSAC 2 cut(s) 289, 407
TspDTI ATGAA 9 cut(s) 49, 61, 176, 300, 540, 773, 836, 993, 1170
TspGWI ACGGA 2 cut(s) 225, 911
TspRI CASTG 4 cut(s) 126, 250, 700, 957
Van91I CCANNNNNTGG 1 cut(s) 397
VpaK11BI GGWCC 2 cut(s) 212, 431
XagI CCTNNNNNAGG 1 cut(s) 809
XapI RAATTY 2 cut(s) 148, 535
XbaI TCTAGA 1 cut(s) 277
XceI RCATGY 2 cut(s) 503, 1490
XcmI CCANNNNNNNNNTGG 5 cut(s) 19, 22, 425, 748, 1034
XmnI GAANNNNTTC 2 cut(s) 548, 832
XspI CTAG 2 cut(s) 278, 294
ZraI GACGTC 1 cut(s) 407
Zsp2I ATGCAT 1 cut(s) 1488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.