Rmu_sc0010665.1_g000001

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010665.1
Physical Location & Seq
Reverse (-)
520 .. 3479
2960 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010665.1_g000001.1.cds

Sequence Viewer

Length: 1545 bp
atggccacactccagcaaatccttctgcaactccaagcaagtccccttaccatccctattgctcttgctgctctgtcttgtctcttcctgtattacatcagactttcgtgcttcactaaaatgagtgctattcccaagctccctcctgtgccagtggttcctgggctgccggtgattgggaatttgctgcaactcaaggagaagaaaccgtacaagactttcacaaggtgggctgaggagtatgggccaatctattcgatcaggactggtgcttccaccatggtcgttctcaatacctcccaagttgccaaagaggccatggtgaccagatattcatccatctcaaccagaaagctatcaaacgcactaaagattcttactgctgataaatgtatggttgcaataagtgactacaacgattttcacaagatgataaagcgatacatactctcaaatgttcttggagccaatgctcagaagaaacaccggagcaacagagataccttgagagcaaatgtctcaagccgattacattctcatgttaagaattctcctcaagaagctgtgaatttcagaagaatctttgagtcagaactctttggaattgcagtgaagcaggcctttggaaaggacatagaaaagcccatttatgtggaggaacttggtactacactttcaagagatgagatctttaaggttctagtgcttgacataatggagggtgcaattgaggttgattggagagatttcttcccttacctgagttggattcctaataagaccatggaaacaaaaattcagcaactatgttcccgcaggaaagcagtgatgactaccctgatcaatgagcagaagaagcgaattgcctcaggagaggaactcaattgttatatcgacttcttactttctgaagggaaaacactgacaatggaccaaatatccatgttactttgggagacagttattgaaacagcagatactacaatggtcacaacagaatgggctatgtatgaaatttctaaagatccaatgcgacaggatcggctctatcaggaaatccaaaaggtttgtggatcggagacggttacagaggaacacttgtcccaactgccgtacctgaatgcagttttccatgaaactctaaggaagcacagtccagttgcgttggttcctttaagatatgcacacgaagatacccaactaggaggttactacattccagctggaactgagattgctataaacatatatgggtgtcacatggacaagcatcaatgggaaagccccgaggaatggaagccagagaggtttttggacccgaaatatgatccgatggatttgtacaagaccatggcttttggggctggaaaaagggtatgtgctggttcccttcaggcaatgttaatagcgtgcccgtcgattggtaggctggtgcaggagtttgagtggaagctgagagctggagaagaagaaaatgtagctactgttgggctcaccactcacaaacgcaatccaatgcaggcagtcctgaagccaagaagttag

Protein Analysis

514

Amino Acids

58.59

Weight (kDa)

8.64

Isoelectric Point (pI)

50.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 814
AclWI GGATC 4 cut(s) 1019, 1047, 1081, 1322
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 5 cut(s) 181, 547, 568, 795, 1014
AcuI CTGAAG 2 cut(s) 930, 1376
AdeI CACNNNGTG 1 cut(s) 228
AfaI GTAC 4 cut(s) 212, 667, 1115, 1343
AfiI CCNNNNNNNGG 3 cut(s) 176, 1293, 1421
AgsI TTSAA 2 cut(s) 678, 968
AjnI CCWGG 1 cut(s) 160
AluBI AGCT 7 cut(s) 139, 355, 563, 1223, 1453, 1460, 1481
AluI AGCT 7 cut(s) 139, 355, 563, 1223, 1453, 1460, 1481
Alw26I GTCTC 4 cut(s) 86, 523, 950, 1073
AlwI GGATC 4 cut(s) 1019, 1047, 1081, 1322
Ama87I CYCGRG 1 cut(s) 1286
AoxI GGCC 4 cut(s) 3, 245, 315, 618
ApeKI GCWGC 3 cut(s) 68, 166, 187
ApoI RAATTY 5 cut(s) 181, 547, 568, 795, 1014
AspS9I GGNCC 3 cut(s) 245, 931, 1315
AsuHPI GGTGA 3 cut(s) 184, 334, 1486
AvaI CYCGRG 1 cut(s) 1286
AvaII GGWCC 2 cut(s) 931, 1315
AxyI CCTNAGG 1 cut(s) 868
BaeGI GKGCMC 1 cut(s) 1415
BaeI ACNNNNGTAYC 2 cut(s) 1097, 1130
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 1 cut(s) 1494
BarI GAAGNNNNNNTAC 2 cut(s) 194, 226
BbvCI CCTCAGC 1 cut(s) 234
BbvI GCAGC 3 cut(s) 55, 153, 174
BccI CCATC 3 cut(s) 59, 347, 1327
BceAI ACGGC 1 cut(s) 1096
BciT130I CCWGG 1 cut(s) 162
BclI TGATCA 1 cut(s) 840
BcoDI GTCTC 4 cut(s) 86, 523, 950, 1073
BfaI CTAG 2 cut(s) 701, 1202
BglI GCCNNNNNGGC 1 cut(s) 314
BglII AGATCT 1 cut(s) 687
BisI GCNGC 3 cut(s) 69, 167, 188
BlsI GCNGC 3 cut(s) 70, 168, 189
Bme1390I CCNGG 1 cut(s) 162
Bme18I GGWCC 2 cut(s) 931, 1315
BmeT110I CYCGRG 1 cut(s) 1286
BmgT120I GGNCC 3 cut(s) 245, 931, 1315
BmiI GGNNCC 5 cut(s) 159, 466, 1170, 1317, 1387
BmrFI CCNGG 1 cut(s) 162
BmsI GCATC 1 cut(s) 1279
BplI GAGNNNNNCTC 2 cut(s) 864, 896
BpmI CTGGAG 1 cut(s) 1482
Bpu10I CCTNAGC 1 cut(s) 234
BpuEI CTTGAG 4 cut(s) 179, 505, 526, 540
BsaBI GATNNNNATC 1 cut(s) 334
BsaJI CCNNGG 6 cut(s) 161, 279, 318, 783, 1287, 1350
BsaWI WCCGGW 1 cut(s) 486
BsaXI ACNNNNNCTCC 2 cut(s) 1430, 1460
Bsc4I CCNNNNNNNGG 3 cut(s) 176, 1293, 1421
Bse118I RCCGGY 1 cut(s) 169
Bse1I ACTGG 3 cut(s) 152, 271, 1157
Bse21I CCTNAGG 1 cut(s) 868
Bse3DI GCAATG 1 cut(s) 1404
Bse8I GATNNNNATC 1 cut(s) 334
BseBI CCWGG 1 cut(s) 162
BseDI CCNNGG 6 cut(s) 161, 279, 318, 783, 1287, 1350
BseGI GGATG 2 cut(s) 51, 335
BseJI GATNNNNATC 1 cut(s) 334
BseLI CCNNNNNNNGG 3 cut(s) 176, 1293, 1421
BseMI GCAATG 1 cut(s) 1404
BseMII CTCAG 6 cut(s) 225, 488, 752, 882, 1221, 1445
BseNI ACTGG 3 cut(s) 152, 271, 1157
BseRI GAGGAG 2 cut(s) 251, 543
BseSI GKGCMC 1 cut(s) 1415
BseXI GCAGC 3 cut(s) 55, 153, 174
BsgI GTGCAG 1 cut(s) 1454
BshFI GGCC 4 cut(s) 5, 247, 317, 620
BsiHKCI CYCGRG 1 cut(s) 1286
BsiSI CCGG 2 cut(s) 170, 487
BslFI GGGAC 2 cut(s) 27, 1087
BslI CCNNNNNNNGG 3 cut(s) 176, 1293, 1421
BsmAI GTCTC 4 cut(s) 86, 523, 950, 1073
BsmBI CGTCTC 1 cut(s) 1073
BsmFI GGGAC 2 cut(s) 27, 1087
BsmI GAATGC 1 cut(s) 1126
BsnI GGCC 4 cut(s) 5, 247, 317, 620
BsoBI CYCGRG 1 cut(s) 1286
Bsp1286I GDGCHC 2 cut(s) 1415, 1494
Bsp1407I TGTACA 1 cut(s) 1341
Bsp143I GATC 7 cut(s) 258, 687, 840, 1024, 1039, 1073, 1327
Bsp19I CCATGG 4 cut(s) 279, 318, 783, 1350
BspACI CCGC 1 cut(s) 814
BspANI GGCC 4 cut(s) 5, 247, 317, 620
BspCNI CTCAG 6 cut(s) 226, 487, 753, 881, 1222, 1446
BspLI GGNNCC 5 cut(s) 159, 466, 1170, 1317, 1387
BspPI GGATC 4 cut(s) 1019, 1047, 1081, 1322
BsrDI GCAATG 1 cut(s) 1404
BsrFI RCCGGY 1 cut(s) 169
BsrGI TGTACA 1 cut(s) 1341
BsrI ACTGG 3 cut(s) 152, 271, 1157
BssAI RCCGGY 1 cut(s) 169
BssECI CCNNGG 6 cut(s) 161, 279, 318, 783, 1287, 1350
BssMI GATC 7 cut(s) 258, 687, 840, 1024, 1039, 1073, 1327
BssT1I CCWWGG 4 cut(s) 279, 318, 783, 1350
Bst2UI CCWGG 1 cut(s) 162
Bst4CI ACNGT 5 cut(s) 210, 961, 1084, 1154, 1486
Bst6I CTCTTC 1 cut(s) 89
BstAUI TGTACA 1 cut(s) 1341
BstC8I GCNNGC 3 cut(s) 618, 1411, 1521
BstDEI CTNAG 7 cut(s) 234, 474, 761, 868, 1142, 1230, 1454
BstDSI CCRYGG 4 cut(s) 279, 318, 783, 1350
BstEII GGTNACC 1 cut(s) 322
BstF5I GGATG 2 cut(s) 51, 335
BstKTI GATC 7 cut(s) 261, 690, 843, 1027, 1042, 1076, 1330
BstMAI GTCTC 4 cut(s) 86, 523, 950, 1073
BstMBI GATC 7 cut(s) 258, 687, 840, 1024, 1039, 1073, 1327
BstMWI GCNNNNNNNGC 4 cut(s) 68, 314, 856, 1361
BstNI CCWGG 1 cut(s) 162
BstPI GGTNACC 1 cut(s) 322
BstSCI CCNGG 1 cut(s) 160
BstSLI GKGCMC 1 cut(s) 1415
BstV1I GCAGC 3 cut(s) 55, 153, 174
BstX2I RGATCY 2 cut(s) 687, 1024
BstXI CCANNNNNNTGG 1 cut(s) 652
BstYI RGATCY 2 cut(s) 687, 1024
Bsu36I CCTNAGG 1 cut(s) 868
BsuRI GGCC 4 cut(s) 5, 247, 317, 620
BtgI CCRYGG 4 cut(s) 279, 318, 783, 1350
BtsCI GGATG 2 cut(s) 51, 335
BtsI GCAGTG 2 cut(s) 615, 831
BtsIMutI CAGTG 4 cut(s) 159, 615, 831, 920
Cac8I GCNNGC 3 cut(s) 618, 1411, 1521
Cfr10I RCCGGY 1 cut(s) 169
Cfr13I GGNCC 3 cut(s) 245, 931, 1315
Csp6I GTAC 4 cut(s) 211, 666, 1114, 1342
CviAII CATG 8 cut(s) 280, 319, 539, 784, 943, 1133, 1261, 1351
CviQI GTAC 4 cut(s) 211, 666, 1114, 1342
DdeI CTNAG 7 cut(s) 234, 474, 761, 868, 1142, 1230, 1454
DpnI GATC 7 cut(s) 260, 689, 842, 1026, 1041, 1075, 1329
DpnII GATC 7 cut(s) 258, 687, 840, 1024, 1039, 1073, 1327
DraIII CACNNNGTG 1 cut(s) 228
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 89
EarI CTCTTC 1 cut(s) 89
Eco130I CCWWGG 4 cut(s) 279, 318, 783, 1350
Eco147I AGGCCT 1 cut(s) 620
Eco24I GRGCYC 1 cut(s) 1494
Eco47I GGWCC 2 cut(s) 931, 1315
Eco57I CTGAAG 2 cut(s) 930, 1376
Eco81I CCTNAGG 1 cut(s) 868
Eco88I CYCGRG 1 cut(s) 1286
Eco91I GGTNACC 1 cut(s) 322
EcoO65I GGTNACC 1 cut(s) 322
EcoRI GAATTC 1 cut(s) 547
EcoRII CCWGG 1 cut(s) 160
EcoT14I CCWWGG 4 cut(s) 279, 318, 783, 1350
EcoT38I GRGCYC 1 cut(s) 1494
ErhI CCWWGG 4 cut(s) 279, 318, 783, 1350
Esp3I CGTCTC 1 cut(s) 1073
FaeI CATG 8 cut(s) 283, 322, 542, 787, 946, 1136, 1264, 1354
FalI AAGNNNNNCTT 2 cut(s) 605, 637
FaqI GGGAC 2 cut(s) 27, 1087
FatI CATG 8 cut(s) 279, 318, 538, 783, 942, 1132, 1260, 1350
FauI CCCGC 1 cut(s) 821
FbaI TGATCA 1 cut(s) 840
Fnu4HI GCNGC 3 cut(s) 69, 167, 188
FokI GGATG 2 cut(s) 38, 322
FriOI GRGCYC 1 cut(s) 1494
Fsp4HI GCNGC 3 cut(s) 69, 167, 188
FspBI CTAG 2 cut(s) 701, 1202
GluI GCNGC 3 cut(s) 69, 167, 188
GsuI CTGGAG 1 cut(s) 1482
HaeIII GGCC 4 cut(s) 5, 247, 317, 620
HapII CCGG 2 cut(s) 170, 487
Hin1II CATG 8 cut(s) 283, 322, 542, 787, 946, 1136, 1264, 1354
HinfI GANTC 4 cut(s) 373, 579, 587, 769
HpaII CCGG 2 cut(s) 170, 487
HphI GGTGA 3 cut(s) 184, 334, 1486
Hpy188I TCNGA 7 cut(s) 101, 477, 575, 592, 910, 1078, 1332
Hpy188III TCNNGA 6 cut(s) 262, 557, 678, 870, 1052, 1528
Hpy99I CGWCG 1 cut(s) 1420
HpyAV CCTTC 3 cut(s) 32, 905, 1400
HpyCH4III ACNGT 5 cut(s) 210, 961, 1084, 1154, 1486
HpyCH4V TGCA 9 cut(s) 28, 190, 401, 608, 725, 1124, 1184, 1435, 1519
HpyF10VI GCNNNNNNNGC 4 cut(s) 68, 314, 856, 1361
HpyF3I CTNAG 7 cut(s) 234, 474, 761, 868, 1142, 1230, 1454
Hsp92II CATG 8 cut(s) 283, 322, 542, 787, 946, 1136, 1264, 1354
Ksp22I TGATCA 1 cut(s) 840
Kzo9I GATC 7 cut(s) 258, 687, 840, 1024, 1039, 1073, 1327
LmnI GCTCC 3 cut(s) 144, 464, 489
Lsp1109I GCAGC 3 cut(s) 55, 153, 174
LweI GCATC 1 cut(s) 1279
MaeI CTAG 2 cut(s) 701, 1202
MaeIII GTNAC 7 cut(s) 322, 407, 945, 988, 1084, 1208, 1256
MalI GATC 7 cut(s) 260, 689, 842, 1026, 1041, 1075, 1329
MboI GATC 7 cut(s) 258, 687, 840, 1024, 1039, 1073, 1327
MboII GAAGA 9 cut(s) 76, 214, 490, 588, 742, 865, 1202, 1478, 1481
MfeI CAATTG 2 cut(s) 726, 883
MflI RGATCY 2 cut(s) 687, 1024
MhlI GDGCHC 2 cut(s) 1415, 1494
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 9 cut(s) 181, 547, 568, 603, 726, 795, 861, 883, 1014
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 596
MmeI TCCRAC 1 cut(s) 746
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 543, 693, 1175, 1403
MslI CAYNNNNRTG 3 cut(s) 119, 537, 650
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 1223
MspI CCGG 2 cut(s) 170, 487
MspR9I CCNGG 1 cut(s) 162
MunI CAATTG 2 cut(s) 726, 883
Mva1269I GAATGC 1 cut(s) 1126
MvaI CCWGG 1 cut(s) 162
MwoI GCNNNNNNNGC 4 cut(s) 68, 314, 856, 1361
NcoI CCATGG 4 cut(s) 279, 318, 783, 1350
NdeII GATC 7 cut(s) 258, 687, 840, 1024, 1039, 1073, 1327
NlaIII CATG 8 cut(s) 283, 322, 542, 787, 946, 1136, 1264, 1354
NlaIV GGNNCC 5 cut(s) 159, 466, 1170, 1317, 1387
NmuCI GTSAC 4 cut(s) 322, 407, 988, 1256
PceI AGGCCT 1 cut(s) 620
PctI GAATGC 1 cut(s) 1126
PfeI GAWTC 3 cut(s) 373, 579, 769
PkrI GCNGC 3 cut(s) 70, 168, 189
PleI GAGTC 1 cut(s) 595
PpsI GAGTC 1 cut(s) 595
Psp6I CCWGG 1 cut(s) 160
PspEI GGTNACC 1 cut(s) 322
PspGI CCWGG 1 cut(s) 160
PspN4I GGNNCC 5 cut(s) 159, 466, 1170, 1317, 1387
PspPI GGNCC 3 cut(s) 245, 931, 1315
PsuI RGATCY 2 cut(s) 687, 1024
PvuII CAGCTG 1 cut(s) 1223
RsaI GTAC 4 cut(s) 212, 667, 1115, 1343
RsaNI GTAC 4 cut(s) 211, 666, 1114, 1342
RseI CAYNNNNRTG 3 cut(s) 119, 537, 650
SaqAI TTAA 4 cut(s) 543, 693, 1175, 1403
SatI GCNGC 3 cut(s) 69, 167, 188
Sau3AI GATC 7 cut(s) 258, 687, 840, 1024, 1039, 1073, 1327
Sau96I GGNCC 3 cut(s) 245, 931, 1315
SchI GAGTC 1 cut(s) 596
ScrFI CCNGG 1 cut(s) 162
SduI GDGCHC 2 cut(s) 1415, 1494
SfaNI GCATC 1 cut(s) 1279
SinI GGWCC 2 cut(s) 931, 1315
SmiMI CAYNNNNRTG 3 cut(s) 119, 537, 650
SmlI CTYRAG 4 cut(s) 194, 505, 520, 555
SmoI CTYRAG 4 cut(s) 194, 505, 520, 555
Sse9I AATT 9 cut(s) 181, 547, 568, 603, 726, 795, 861, 883, 1014
SseBI AGGCCT 1 cut(s) 620
SsiI CCGC 1 cut(s) 814
SspMI CTAG 2 cut(s) 701, 1202
StuI AGGCCT 1 cut(s) 620
StyD4I CCNGG 1 cut(s) 160
StyI CCWWGG 4 cut(s) 279, 318, 783, 1350
TaaI ACNGT 5 cut(s) 210, 961, 1084, 1154, 1486
TaqI TCGA 3 cut(s) 257, 894, 1418
TasI AATT 9 cut(s) 181, 547, 568, 603, 726, 795, 861, 883, 1014
TatI WGTACW 1 cut(s) 1341
TfiI GAWTC 3 cut(s) 373, 579, 769
Tru1I TTAA 4 cut(s) 543, 693, 1175, 1403
Tru9I TTAA 4 cut(s) 543, 693, 1175, 1403
TscAI CASTG 4 cut(s) 159, 615, 831, 927
TseFI GTSAC 4 cut(s) 322, 407, 988, 1256
TseI GCWGC 3 cut(s) 68, 166, 187
Tsp45I GTSAC 4 cut(s) 322, 407, 988, 1256
TspDTI ATGAA 3 cut(s) 324, 1026, 1149
TspRI CASTG 4 cut(s) 159, 615, 831, 927
VpaK11BI GGWCC 2 cut(s) 931, 1315
XapI RAATTY 5 cut(s) 181, 547, 568, 795, 1014
XcmI CCANNNNNNNNNTGG 2 cut(s) 316, 1067
XspI CTAG 2 cut(s) 701, 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.