Rorug06G0293600

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
44571223 .. 44572890
1668 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0293600.1

Sequence Viewer

Length: 1206 bp
ATGATAGCGGAACGATCCCTAGCGGCGATGGAGAGTAAGTATCTCTACATATGTACCTGTGAAATGCACAAATCTCTTTTCGATCGGTGGGTTGTTCACCGAATCGAAATGAGCGATGTGTTATCTGCATCGGAAGACCATATTCGTTATCTGCCTTTCAAGCAAGTGGCTAATGAAATTGGCGGCCATGACCTTCCGTTGTTGGTGGGTTGTGGTGTCTTCAAATCCAAAATTCTCATCGGCGGCGGCGTGAAGAAAATTCCGGGGGCCCATCCGTCTCCAGCTTCGTCTGTGTTTTTTTTTGAGACAGACACAACCGATCGGAAACTCGATCAGAAACTCAAGTTGGGGAGCTTTCCCCCTTTCCTAGGAGGGAAAGCTCAACCCCTGCTAGTGGAGATGAAGGGGCAACTTTATGCTCTTGCCGGTGACGAGATGAAGTTGAGATACGATAGTCATTTTGAGAGATTTGACCCGTCCTGCGAAAAATGGTCACCCCTGCCCCGACCTCCTATTTGGGATCCTGACTCTCCATACTATAGGACTCCCGTCGGTTCAGGTTATGTAATCACAGACACCAGCATTCTTTTCTCACGTCAGGATACCCCTGTGTTCCGGTTTGACATCACGAAGCCGAATGCAGGATGGTCTGTACAGGAATCTTTGTGTTCTGGAAAATCTTTTCCCTTTCGAGGCACAACTCTAGTTCATGACTGTGTTTGTGGTGGTTTCATAATCTTTGCCATAGATATTGAGCCAGAAAATTCGAATTATGATGGGAAGTGGCCTCAAACTAGATTTCCAAGAATACTAGTCTACCACATGTCCAAAGATTATGGTTCTTGGACCGATGTTGCAACTGTGGAACTGCCATTTACAAATGAGTTGCCTCTCATATTTCAAGAACCAGTAAGCTATAACTTTGTTAGTCTAGGAGATCAAAGAGTATGCCTGGTTCTGGCTACATTTAGCAGCCCAATAAACAGTGGCCGTTGGGAAGAAAGTGAGATGATGCGTTTTCTTGTGACAACATTCAAGTACAAAACTGAAACTCCCATGAAAAGACCAAGGGAAGAATCACCCATTTCCTTTTCATTCAGCTGTCAATTCCTGAGTAATCCTGTCATCTTTGATTATAATATCCAGCAGCATACTCCATCTCCTGCAACCGAGCATGCCTTAACGCTGGGCGCGTTTTTGCTGTAA

Protein Analysis

401

Amino Acids

45.46

Weight (kDa)

5.96

Isoelectric Point (pI)

54.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 116 - 255 5.9e-06 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1137
AccI GTMKAC 1 cut(s) 816
AccII CGCG 1 cut(s) 1193
AciI CCGC 5 cut(s) 8, 23, 183, 243, 246
AclWI GGATC 3 cut(s) 9, 515, 528
AcoI YGGCCR 2 cut(s) 184, 988
AcsI RAATTY 3 cut(s) 231, 258, 763
AfaI GTAC 3 cut(s) 55, 654, 1040
AfiI CCNNNNNNNGG 5 cut(s) 368, 394, 641, 692, 958
AflIII ACRYGT 1 cut(s) 822
AgsI TTSAA 4 cut(s) 160, 223, 902, 1036
AhlI ACTAGT 1 cut(s) 811
AjiI CACGTC 1 cut(s) 596
AjnI CCWGG 1 cut(s) 951
AjuI GAANNNNNNNTTGG 2 cut(s) 329, 361
AluBI AGCT 5 cut(s) 284, 354, 380, 915, 1101
AluI AGCT 5 cut(s) 284, 354, 380, 915, 1101
Alw26I GTCTC 2 cut(s) 282, 299
AlwI GGATC 3 cut(s) 9, 515, 528
AoxI GGCC 4 cut(s) 184, 267, 785, 988
ApaI GGGCCC 1 cut(s) 271
ApeKI GCWGC 2 cut(s) 972, 1147
ApoI RAATTY 3 cut(s) 231, 258, 763
ArsI GACNNNNNNTTYG 2 cut(s) 498, 530
AspA2I CCTAGG 1 cut(s) 367
AspLEI GCGC 1 cut(s) 1193
AspS9I GGNCC 3 cut(s) 267, 268, 846
AsuC2I CCSGG 1 cut(s) 264
AsuHPI GGTGA 4 cut(s) 89, 440, 486, 1071
AsuII TTCGAA 1 cut(s) 767
AvaII GGWCC 1 cut(s) 846
AvrII CCTAGG 1 cut(s) 367
BaeGI GKGCMC 1 cut(s) 271
BaeI ACNNNNGTAYC 6 cut(s) 37, 70, 439, 472, 594, 627
BamHI GGATCC 1 cut(s) 520
BanII GRGCYC 1 cut(s) 271
BarI GAAGNNNNNNTAC 2 cut(s) 431, 463
BbsI GAAGAC 2 cut(s) 141, 211
BbvI GCAGC 2 cut(s) 984, 1159
BccI CCATC 5 cut(s) 22, 279, 639, 770, 1165
BceAI ACGGC 1 cut(s) 975
BciT130I CCWGG 1 cut(s) 953
BciVI GTATCC 1 cut(s) 595
BcnI CCSGG 1 cut(s) 264
BcoDI GTCTC 2 cut(s) 282, 299
BcuI ACTAGT 1 cut(s) 811
BfaI CTAG 7 cut(s) 20, 368, 392, 704, 795, 812, 932
BfmI CTRYAG 1 cut(s) 538
BfuI GTATCC 1 cut(s) 595
BisI GCNGC 6 cut(s) 24, 184, 244, 247, 973, 1148
BlnI CCTAGG 1 cut(s) 367
BlsI GCNGC 6 cut(s) 25, 185, 245, 248, 974, 1149
Bme1390I CCNGG 2 cut(s) 264, 953
Bme18I GGWCC 1 cut(s) 846
BmgBI CACGTC 1 cut(s) 596
BmgT120I GGNCC 3 cut(s) 267, 268, 846
BmiI GGNNCC 3 cut(s) 268, 269, 522
BmrFI CCNGG 2 cut(s) 264, 953
BmsI GCATC 2 cut(s) 137, 1002
BoxI GACNNNNGTC 1 cut(s) 548
BpiI GAAGAC 2 cut(s) 141, 211
BpmI CTGGAG 1 cut(s) 264
Bpu14I TTCGAA 1 cut(s) 767
BpuEI CTTGAG 1 cut(s) 326
BpuMI CCSGG 1 cut(s) 264
BsaJI CCNNGG 3 cut(s) 263, 367, 1067
BsaWI WCCGGW 1 cut(s) 615
BsaXI ACNNNNNCTCC 6 cut(s) 23, 53, 1036, 1066, 1144, 1174
Bsc4I CCNNNNNNNGG 5 cut(s) 368, 394, 641, 692, 958
Bse118I RCCGGY 1 cut(s) 425
Bse1I ACTGG 1 cut(s) 908
BseBI CCWGG 1 cut(s) 953
BseDI CCNNGG 3 cut(s) 263, 367, 1067
BseGI GGATG 2 cut(s) 271, 650
BseLI CCNNNNNNNGG 5 cut(s) 368, 394, 641, 692, 958
BseMII CTCAG 1 cut(s) 1103
BseNI ACTGG 1 cut(s) 908
BseSI GKGCMC 1 cut(s) 271
BseXI GCAGC 2 cut(s) 984, 1159
BseYI CCCAGC 1 cut(s) 1186
Bsh1236I CGCG 1 cut(s) 1193
Bsh1285I CGRYCG 2 cut(s) 85, 322
BshFI GGCC 4 cut(s) 186, 269, 787, 990
BsiEI CGRYCG 2 cut(s) 85, 322
BsiSI CCGG 3 cut(s) 263, 426, 616
BslI CCNNNNNNNGG 5 cut(s) 368, 394, 641, 692, 958
BsmAI GTCTC 2 cut(s) 282, 299
BsmBI CGTCTC 1 cut(s) 282
BsmI GAATGC 2 cut(s) 582, 643
BsnI GGCC 4 cut(s) 186, 269, 787, 990
Bsp119I TTCGAA 1 cut(s) 767
Bsp120I GGGCCC 1 cut(s) 267
Bsp1286I GDGCHC 1 cut(s) 271
Bsp1407I TGTACA 1 cut(s) 652
Bsp143I GATC 6 cut(s) 14, 82, 319, 331, 520, 937
BspACI CCGC 5 cut(s) 8, 23, 183, 243, 246
BspANI GGCC 4 cut(s) 186, 269, 787, 990
BspCNI CTCAG 1 cut(s) 1104
BspFNI CGCG 1 cut(s) 1193
BspHI TCATGA 1 cut(s) 709
BspLI GGNNCC 3 cut(s) 268, 269, 522
BspPI GGATC 3 cut(s) 9, 515, 528
BspT104I TTCGAA 1 cut(s) 767
BsrFI RCCGGY 1 cut(s) 425
BsrGI TGTACA 1 cut(s) 652
BsrI ACTGG 1 cut(s) 908
BssAI RCCGGY 1 cut(s) 425
BssECI CCNNGG 3 cut(s) 263, 367, 1067
BssMI GATC 6 cut(s) 14, 82, 319, 331, 520, 937
BssT1I CCWWGG 2 cut(s) 367, 1067
Bst2UI CCWGG 1 cut(s) 953
Bst4CI ACNGT 3 cut(s) 716, 862, 986
BstAUI TGTACA 1 cut(s) 652
BstBI TTCGAA 1 cut(s) 767
BstC8I GCNNGC 1 cut(s) 1176
BstDEI CTNAG 1 cut(s) 1112
BstEII GGTNACC 1 cut(s) 492
BstENI CCTNNNNNAGG 1 cut(s) 366
BstF5I GGATG 2 cut(s) 271, 650
BstFNI CGCG 1 cut(s) 1193
BstHHI GCGC 1 cut(s) 1193
BstKTI GATC 6 cut(s) 17, 85, 322, 334, 523, 940
BstMAI GTCTC 2 cut(s) 282, 299
BstMBI GATC 6 cut(s) 14, 82, 319, 331, 520, 937
BstMCI CGRYCG 2 cut(s) 85, 322
BstMWI GCNNNNNNNGC 1 cut(s) 160
BstNI CCWGG 1 cut(s) 953
BstNSI RCATGY 2 cut(s) 826, 1178
BstPAI GACNNNNGTC 1 cut(s) 548
BstPI GGTNACC 1 cut(s) 492
BstSCI CCNGG 2 cut(s) 262, 951
BstSFI CTRYAG 1 cut(s) 538
BstSLI GKGCMC 1 cut(s) 271
BstUI CGCG 1 cut(s) 1193
BstV1I GCAGC 2 cut(s) 984, 1159
BstV2I GAAGAC 2 cut(s) 141, 211
BstX2I RGATCY 1 cut(s) 520
BstYI RGATCY 1 cut(s) 520
BsuI GTATCC 1 cut(s) 595
BsuRI GGCC 4 cut(s) 186, 269, 787, 990
BtgZI GCGATG 2 cut(s) 41, 129
BtrI CACGTC 1 cut(s) 596
BtsCI GGATG 2 cut(s) 271, 650
BtsIMutI CAGTG 1 cut(s) 991
Cac8I GCNNGC 1 cut(s) 1176
CciI TCATGA 1 cut(s) 709
CfoI GCGC 1 cut(s) 1193
Cfr10I RCCGGY 1 cut(s) 425
Cfr13I GGNCC 3 cut(s) 267, 268, 846
Csp6I GTAC 3 cut(s) 54, 653, 1039
CviAII CATG 5 cut(s) 188, 710, 823, 1057, 1175
CviQI GTAC 3 cut(s) 54, 653, 1039
DdeI CTNAG 1 cut(s) 1112
DpnI GATC 6 cut(s) 16, 84, 321, 333, 522, 939
DpnII GATC 6 cut(s) 14, 82, 319, 331, 520, 937
EaeI YGGCCR 2 cut(s) 184, 988
Eco130I CCWWGG 2 cut(s) 367, 1067
Eco24I GRGCYC 1 cut(s) 271
Eco47I GGWCC 1 cut(s) 846
Eco91I GGTNACC 1 cut(s) 492
EcoNI CCTNNNNNAGG 1 cut(s) 366
EcoO109I RGGNCCY 1 cut(s) 267
EcoO65I GGTNACC 1 cut(s) 492
EcoRII CCWGG 1 cut(s) 951
EcoT14I CCWWGG 2 cut(s) 367, 1067
EcoT38I GRGCYC 1 cut(s) 271
ErhI CCWWGG 2 cut(s) 367, 1067
Esp3I CGTCTC 1 cut(s) 282
FaeI CATG 5 cut(s) 191, 713, 826, 1060, 1178
FatI CATG 5 cut(s) 187, 709, 822, 1056, 1174
FauNDI CATATG 1 cut(s) 50
FblI GTMKAC 1 cut(s) 816
Fnu4HI GCNGC 6 cut(s) 24, 184, 244, 247, 973, 1148
FokI GGATG 2 cut(s) 258, 657
FriOI GRGCYC 1 cut(s) 271
Fsp4HI GCNGC 6 cut(s) 24, 184, 244, 247, 973, 1148
FspBI CTAG 7 cut(s) 20, 368, 392, 704, 795, 812, 932
GlaI GCGC 1 cut(s) 1192
GluI GCNGC 6 cut(s) 24, 184, 244, 247, 973, 1148
GsaI CCCAGC 1 cut(s) 1190
GsuI CTGGAG 1 cut(s) 264
HaeIII GGCC 4 cut(s) 186, 269, 787, 990
HapII CCGG 3 cut(s) 263, 426, 616
HhaI GCGC 1 cut(s) 1193
Hin1II CATG 5 cut(s) 191, 713, 826, 1060, 1178
Hin6I GCGC 1 cut(s) 1191
HinP1I GCGC 1 cut(s) 1191
HinfI GANTC 5 cut(s) 102, 527, 544, 659, 1076
HpaII CCGG 3 cut(s) 263, 426, 616
HphI GGTGA 4 cut(s) 89, 440, 486, 1071
Hpy166II GTNNAC 2 cut(s) 97, 817
Hpy188I TCNGA 3 cut(s) 133, 324, 336
Hpy188III TCNNGA 7 cut(s) 524, 599, 628, 672, 710, 902, 1111
Hpy8I GTNNAC 2 cut(s) 97, 817
Hpy99I CGWCG 1 cut(s) 554
HpyAV CCTTC 2 cut(s) 203, 397
HpyCH4III ACNGT 3 cut(s) 716, 862, 986
HpyCH4IV ACGT 1 cut(s) 595
HpyCH4V TGCA 5 cut(s) 67, 128, 641, 857, 1166
HpyF10VI GCNNNNNNNGC 1 cut(s) 160
HpyF3I CTNAG 1 cut(s) 1112
HpySE526I ACGT 1 cut(s) 595
Hsp92II CATG 5 cut(s) 191, 713, 826, 1060, 1178
HspAI GCGC 1 cut(s) 1191
Kzo9I GATC 6 cut(s) 14, 82, 319, 331, 520, 937
LmnI GCTCC 1 cut(s) 351
Lsp1109I GCAGC 2 cut(s) 984, 1159
LweI GCATC 2 cut(s) 137, 1002
MaeI CTAG 7 cut(s) 20, 368, 392, 704, 795, 812, 932
MaeII ACGT 1 cut(s) 595
MaeIII GTNAC 3 cut(s) 428, 492, 1024
MalI GATC 6 cut(s) 16, 84, 321, 333, 522, 939
MboI GATC 6 cut(s) 14, 82, 319, 331, 520, 937
MboII GAAGA 5 cut(s) 146, 211, 265, 1010, 1085
MflI RGATCY 1 cut(s) 520
MhlI GDGCHC 1 cut(s) 271
MluCI AATT 6 cut(s) 177, 231, 258, 763, 769, 1106
MlyI GAGTC 2 cut(s) 521, 538
MnlI CCTC 5 cut(s) 365, 519, 686, 798, 900
MseI TTAA 1 cut(s) 1181
MslI CAYNNNNRTG 1 cut(s) 714
MspA1I CMGCKG 1 cut(s) 1101
MspI CCGG 3 cut(s) 263, 426, 616
MspR9I CCNGG 2 cut(s) 264, 953
Mva1269I GAATGC 2 cut(s) 582, 643
MvaI CCWGG 1 cut(s) 953
MvnI CGCG 1 cut(s) 1193
MwoI GCNNNNNNNGC 1 cut(s) 160
NciI CCSGG 1 cut(s) 264
NdeI CATATG 1 cut(s) 50
NdeII GATC 6 cut(s) 14, 82, 319, 331, 520, 937
NlaIII CATG 5 cut(s) 191, 713, 826, 1060, 1178
NlaIV GGNNCC 3 cut(s) 268, 269, 522
NmuCI GTSAC 3 cut(s) 428, 492, 1024
NspI RCATGY 2 cut(s) 826, 1178
NspV TTCGAA 1 cut(s) 767
PaeI GCATGC 1 cut(s) 1178
PagI TCATGA 1 cut(s) 709
PciI ACATGT 1 cut(s) 822
PcsI WCGNNNNNNNCGW 3 cut(s) 111, 246, 1190
PctI GAATGC 2 cut(s) 582, 643
PfeI GAWTC 3 cut(s) 102, 659, 1076
PkrI GCNGC 6 cut(s) 25, 185, 245, 248, 974, 1149
Ple19I CGATCG 2 cut(s) 85, 322
PleI GAGTC 2 cut(s) 521, 538
PpsI GAGTC 2 cut(s) 521, 538
PscI ACATGT 1 cut(s) 822
PshAI GACNNNNGTC 1 cut(s) 548
PsiI TTATAA 1 cut(s) 1137
Psp6I CCWGG 1 cut(s) 951
PspEI GGTNACC 1 cut(s) 492
PspFI CCCAGC 1 cut(s) 1186
PspGI CCWGG 1 cut(s) 951
PspN4I GGNNCC 3 cut(s) 268, 269, 522
PspOMI GGGCCC 1 cut(s) 267
PspPI GGNCC 3 cut(s) 267, 268, 846
PsrI GAACNNNNNNTAC 2 cut(s) 939, 971
PsuI RGATCY 1 cut(s) 520
PvuI CGATCG 2 cut(s) 85, 322
PvuII CAGCTG 1 cut(s) 1101
RsaI GTAC 3 cut(s) 55, 654, 1040
RsaNI GTAC 3 cut(s) 54, 653, 1039
RseI CAYNNNNRTG 1 cut(s) 714
SaqAI TTAA 1 cut(s) 1181
SatI GCNGC 6 cut(s) 24, 184, 244, 247, 973, 1148
Sau3AI GATC 6 cut(s) 14, 82, 319, 331, 520, 937
Sau96I GGNCC 3 cut(s) 267, 268, 846
SchI GAGTC 2 cut(s) 521, 538
ScrFI CCNGG 2 cut(s) 264, 953
SduI GDGCHC 1 cut(s) 271
SfaNI GCATC 2 cut(s) 137, 1002
SfcI CTRYAG 1 cut(s) 538
SfuI TTCGAA 1 cut(s) 767
SinI GGWCC 1 cut(s) 846
SmiMI CAYNNNNRTG 1 cut(s) 714
SmlI CTYRAG 1 cut(s) 341
SmoI CTYRAG 1 cut(s) 341
SpeI ACTAGT 1 cut(s) 811
SphI GCATGC 1 cut(s) 1178
Sse9I AATT 6 cut(s) 177, 231, 258, 763, 769, 1106
SsiI CCGC 5 cut(s) 8, 23, 183, 243, 246
SspMI CTAG 7 cut(s) 20, 368, 392, 704, 795, 812, 932
StyD4I CCNGG 2 cut(s) 262, 951
StyI CCWWGG 2 cut(s) 367, 1067
TaaI ACNGT 3 cut(s) 716, 862, 986
TaiI ACGT 1 cut(s) 598
TaqI TCGA 5 cut(s) 81, 105, 330, 691, 767
TaqII GACCGA 1 cut(s) 863
TasI AATT 6 cut(s) 177, 231, 258, 763, 769, 1106
TatI WGTACW 2 cut(s) 652, 1038
TauI GCSGC 4 cut(s) 26, 186, 246, 249
TfiI GAWTC 3 cut(s) 102, 659, 1076
Tru1I TTAA 1 cut(s) 1181
Tru9I TTAA 1 cut(s) 1181
TscAI CASTG 1 cut(s) 991
TseFI GTSAC 3 cut(s) 428, 492, 1024
TseI GCWGC 2 cut(s) 972, 1147
Tsp45I GTSAC 3 cut(s) 428, 492, 1024
TspDTI ATGAA 7 cut(s) 189, 416, 452, 698, 721, 1073, 1083
TspGWI ACGGA 2 cut(s) 186, 264
TspRI CASTG 1 cut(s) 991
VpaK11BI GGWCC 1 cut(s) 846
XagI CCTNNNNNAGG 1 cut(s) 366
XapI RAATTY 3 cut(s) 231, 258, 763
XceI RCATGY 2 cut(s) 826, 1178
XmaJI CCTAGG 1 cut(s) 367
XmiI GTMKAC 1 cut(s) 816
XspI CTAG 7 cut(s) 20, 368, 392, 704, 795, 812, 932
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.