BEST Arabidopsis thaliana protein match is
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g02210 |
| malus_domestica | MD05G1345300.v1.1 |
| prunus_persica | Prupe.4G021500_v2.0.a1 |
| pyrus_communis | pycom05g31420 |
| rosa_chinensis | RchiOBHm_Chr5g0003281 |
| rosa_laevigata | RLG00000018061 RLG00000031103 RLG00000031104 RLG00000031121 |
| rosa_multiflora | Rmu_co8274905.1_g000001 Rmu_sc0002494.1_g000002 Rmu_sc0002494.1_g000004 Rmu_sc0010917.1_g000009 Rmu_sc0010917.1_g000010 |
| rosa_roxburghii | Rroxscaffold_1G00072680 |
| rosa_rugosa | Rorug04G0401900 Rorug04G0402400 |
| rosa_samantha | Rh5AG028400 Rh5AG028500 Rh5BG028600 Rh5CG030800 Rh5CG030900 Rh5DG027600 Rh5DG029000 Rh5DG029100 |
| rosa_wichuraiana | Rw5G002650 Rw5G002700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 47 |
| Acc36I | ACCTGC | 1 cut(s) | 1382 |
| AccB1I | GGYRCC | 3 cut(s) | 17, 54, 602 |
| AccII | CGCG | 2 cut(s) | 519, 1702 |
| AciI | CCGC | 7 cut(s) | 15, 31, 153, 172, 642, 719, 1700 |
| AclI | AACGTT | 1 cut(s) | 1368 |
| AclWI | GGATC | 2 cut(s) | 306, 979 |
| AcoI | YGGCCR | 2 cut(s) | 1697, 1708 |
| AcsI | RAATTY | 3 cut(s) | 183, 1028, 1621 |
| AcuI | CTGAAG | 3 cut(s) | 71, 160, 770 |
| AcyI | GRCGYC | 2 cut(s) | 44, 55 |
| AfaI | GTAC | 2 cut(s) | 1099, 1135 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 58, 141, 162, 272, 1094, 1335, 1502, 1617, 1706 |
| AflII | CTTAAG | 2 cut(s) | 472, 931 |
| AflIII | ACRYGT | 1 cut(s) | 260 |
| AjnI | CCWGG | 3 cut(s) | 57, 951, 1361 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 260, 292 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1623, 1655 |
| Alw21I | GWGCWC | 2 cut(s) | 204, 235 |
| Alw26I | GTCTC | 1 cut(s) | 1601 |
| AlwI | GGATC | 2 cut(s) | 306, 979 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1412 |
| Ama87I | CYCGRG | 1 cut(s) | 1022 |
| AoxI | GGCC | 3 cut(s) | 132, 1697, 1708 |
| ApeKI | GCWGC | 3 cut(s) | 166, 306, 1444 |
| ApoI | RAATTY | 3 cut(s) | 183, 1028, 1621 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1552, 1584 |
| AspLEI | GCGC | 2 cut(s) | 57, 1776 |
| AspS9I | GGNCC | 1 cut(s) | 1359 |
| AsuC2I | CCSGG | 3 cut(s) | 157, 1496, 1647 |
| AsuHPI | GGTGA | 5 cut(s) | 910, 1295, 1385, 1517, 1570 |
| AvaI | CYCGRG | 1 cut(s) | 1022 |
| AvaII | GGWCC | 1 cut(s) | 1359 |
| BalI | TGGCCA | 1 cut(s) | 1710 |
| BanI | GGYRCC | 3 cut(s) | 17, 54, 602 |
| BanII | GRGCYC | 2 cut(s) | 204, 235 |
| BauI | CACGAG | 1 cut(s) | 1671 |
| Bbv12I | GWGCWC | 2 cut(s) | 204, 235 |
| BbvCI | CCTCAGC | 1 cut(s) | 822 |
| BbvI | GCAGC | 3 cut(s) | 178, 293, 1456 |
| BccI | CCATC | 5 cut(s) | 521, 583, 811, 1139, 1308 |
| BceAI | ACGGC | 3 cut(s) | 18, 206, 1243 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 497, 531 |
| BciT130I | CCWGG | 3 cut(s) | 59, 953, 1363 |
| BclI | TGATCA | 2 cut(s) | 220, 612 |
| BcnI | CCSGG | 3 cut(s) | 157, 1496, 1647 |
| BcoDI | GTCTC | 1 cut(s) | 1601 |
| BfaI | CTAG | 5 cut(s) | 78, 408, 716, 1140, 1257 |
| BfmI | CTRYAG | 3 cut(s) | 989, 1231, 1389 |
| BfoI | RGCGCY | 1 cut(s) | 58 |
| BfrI | CTTAAG | 2 cut(s) | 472, 931 |
| BfuAI | ACCTGC | 1 cut(s) | 1382 |
| BglII | AGATCT | 2 cut(s) | 1018, 1763 |
| BisI | GCNGC | 6 cut(s) | 31, 153, 167, 307, 1445, 1700 |
| BlsI | GCNGC | 6 cut(s) | 32, 154, 168, 308, 1446, 1701 |
| BmcAI | AGTACT | 1 cut(s) | 1135 |
| Bme1390I | CCNGG | 6 cut(s) | 59, 157, 953, 1363, 1496, 1647 |
| Bme18I | GGWCC | 1 cut(s) | 1359 |
| BmeT110I | CYCGRG | 1 cut(s) | 1022 |
| BmgT120I | GGNCC | 1 cut(s) | 1359 |
| BmiI | GGNNCC | 7 cut(s) | 19, 56, 127, 214, 604, 1150, 1360 |
| BmrFI | CCNGG | 6 cut(s) | 59, 157, 953, 1363, 1496, 1647 |
| BmsI | GCATC | 2 cut(s) | 853, 1668 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1357 |
| BpmI | CTGGAG | 1 cut(s) | 1389 |
| Bpu10I | CCTNAGC | 1 cut(s) | 822 |
| BpuEI | CTTGAG | 3 cut(s) | 266, 988, 1330 |
| BpuMI | CCSGG | 3 cut(s) | 157, 1496, 1647 |
| BsaBI | GATNNNNATC | 1 cut(s) | 888 |
| BsaHI | GRCGYC | 2 cut(s) | 44, 55 |
| BsaI | GGTCTC | 1 cut(s) | 1601 |
| BsaJI | CCNNGG | 3 cut(s) | 129, 331, 951 |
| BsaWI | WCCGGW | 2 cut(s) | 119, 1617 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 565, 595, 1267, 1297, 1623, 1653 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 58, 141, 162, 272, 1094, 1335, 1502, 1617, 1706 |
| Bse1I | ACTGG | 2 cut(s) | 98, 1163 |
| Bse3DI | GCAATG | 2 cut(s) | 301, 1303 |
| Bse8I | GATNNNNATC | 1 cut(s) | 888 |
| BseBI | CCWGG | 3 cut(s) | 59, 953, 1363 |
| BseDI | CCNNGG | 3 cut(s) | 129, 331, 951 |
| BseGI | GGATG | 4 cut(s) | 327, 799, 1159, 1683 |
| BseJI | GATNNNNATC | 1 cut(s) | 888 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 58, 141, 162, 272, 1094, 1335, 1502, 1617, 1706 |
| BseMI | GCAATG | 2 cut(s) | 301, 1303 |
| BseMII | CTCAG | 3 cut(s) | 813, 969, 1446 |
| BseNI | ACTGG | 2 cut(s) | 98, 1163 |
| BseRI | GAGGAG | 2 cut(s) | 586, 1555 |
| BseXI | GCAGC | 3 cut(s) | 178, 293, 1456 |
| BsgI | GTGCAG | 2 cut(s) | 552, 866 |
| Bsh1236I | CGCG | 2 cut(s) | 519, 1702 |
| BshFI | GGCC | 3 cut(s) | 134, 1699, 1710 |
| BshNI | GGYRCC | 3 cut(s) | 17, 54, 602 |
| BsiHKAI | GWGCWC | 2 cut(s) | 204, 235 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1022 |
| BsiSI | CCGG | 6 cut(s) | 52, 120, 156, 1496, 1618, 1646 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 58, 141, 162, 272, 1094, 1335, 1502, 1617, 1706 |
| BsmAI | GTCTC | 1 cut(s) | 1601 |
| BsmI | GAATGC | 4 cut(s) | 417, 1079, 1352, 1689 |
| BsnI | GGCC | 3 cut(s) | 134, 1699, 1710 |
| Bso31I | GGTCTC | 1 cut(s) | 1601 |
| BsoBI | CYCGRG | 1 cut(s) | 1022 |
| Bsp1286I | GDGCHC | 2 cut(s) | 204, 235 |
| Bsp68I | TCGCGA | 1 cut(s) | 519 |
| BspACI | CCGC | 7 cut(s) | 15, 31, 153, 172, 642, 719, 1700 |
| BspANI | GGCC | 3 cut(s) | 134, 1699, 1710 |
| BspCNI | CTCAG | 3 cut(s) | 814, 970, 1445 |
| BspFNI | CGCG | 2 cut(s) | 519, 1702 |
| BspHI | TCATGA | 1 cut(s) | 654 |
| BspLI | GGNNCC | 7 cut(s) | 19, 56, 127, 214, 604, 1150, 1360 |
| BspMAI | CTGCAG | 1 cut(s) | 1393 |
| BspMI | ACCTGC | 1 cut(s) | 1382 |
| BspPI | GGATC | 2 cut(s) | 306, 979 |
| BspT107I | GGYRCC | 3 cut(s) | 17, 54, 602 |
| BspTI | CTTAAG | 2 cut(s) | 472, 931 |
| BspTNI | GGTCTC | 1 cut(s) | 1601 |
| BsrDI | GCAATG | 2 cut(s) | 301, 1303 |
| BsrI | ACTGG | 2 cut(s) | 98, 1163 |
| BssECI | CCNNGG | 3 cut(s) | 129, 331, 951 |
| BssNI | GRCGYC | 2 cut(s) | 44, 55 |
| BssSI | CACGAG | 1 cut(s) | 1671 |
| BssT1I | CCWWGG | 1 cut(s) | 129 |
| Bst2BI | CACGAG | 1 cut(s) | 1671 |
| Bst2UI | CCWGG | 3 cut(s) | 59, 953, 1363 |
| Bst4CI | ACNGT | 4 cut(s) | 367, 399, 1133, 1721 |
| Bst6I | CTCTTC | 3 cut(s) | 480, 666, 792 |
| BstACI | GRCGYC | 2 cut(s) | 44, 55 |
| BstAFI | CTTAAG | 2 cut(s) | 472, 931 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 872 |
| BstC8I | GCNNGC | 3 cut(s) | 150, 1704, 1708 |
| BstDEI | CTNAG | 4 cut(s) | 560, 822, 978, 1432 |
| BstDSI | CCRYGG | 1 cut(s) | 331 |
| BstF5I | GGATG | 4 cut(s) | 327, 799, 1159, 1683 |
| BstFNI | CGCG | 2 cut(s) | 519, 1702 |
| BstH2I | RGCGCY | 1 cut(s) | 58 |
| BstHHI | GCGC | 2 cut(s) | 57, 1776 |
| BstMAI | GTCTC | 1 cut(s) | 1601 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 97, 166, 199, 853, 872, 1453 |
| BstNI | CCWGG | 3 cut(s) | 59, 953, 1363 |
| BstNSI | RCATGY | 1 cut(s) | 264 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1357 |
| BstSCI | CCNGG | 6 cut(s) | 57, 155, 951, 1361, 1494, 1645 |
| BstSFI | CTRYAG | 3 cut(s) | 989, 1231, 1389 |
| BstUI | CGCG | 2 cut(s) | 519, 1702 |
| BstV1I | GCAGC | 3 cut(s) | 178, 293, 1456 |
| BstX2I | RGATCY | 2 cut(s) | 1018, 1763 |
| BstYI | RGATCY | 2 cut(s) | 1018, 1763 |
| BsuRI | GGCC | 3 cut(s) | 134, 1699, 1710 |
| BtgI | CCRYGG | 1 cut(s) | 331 |
| BtsCI | GGATG | 4 cut(s) | 327, 799, 1159, 1683 |
| BtsI | GCAGTG | 1 cut(s) | 135 |
| BtsIMutI | CAGTG | 3 cut(s) | 91, 135, 1170 |
| BtuMI | TCGCGA | 1 cut(s) | 519 |
| BveI | ACCTGC | 1 cut(s) | 1382 |
| Cac8I | GCNNGC | 3 cut(s) | 150, 1704, 1708 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1412 |
| CciI | TCATGA | 1 cut(s) | 654 |
| CfoI | GCGC | 2 cut(s) | 57, 1776 |
| Cfr13I | GGNCC | 1 cut(s) | 1359 |
| CseI | GACGC | 1 cut(s) | 1695 |
| Csp6I | GTAC | 2 cut(s) | 1098, 1134 |
| CviQI | GTAC | 2 cut(s) | 1098, 1134 |
| DdeI | CTNAG | 4 cut(s) | 560, 822, 978, 1432 |
| DinI | GGCGCC | 1 cut(s) | 56 |
| DraI | TTTAAA | 1 cut(s) | 1786 |
| EaeI | YGGCCR | 2 cut(s) | 1697, 1708 |
| Eam1104I | CTCTTC | 3 cut(s) | 480, 666, 792 |
| EarI | CTCTTC | 3 cut(s) | 480, 666, 792 |
| Ecl136II | GAGCTC | 2 cut(s) | 202, 233 |
| Eco130I | CCWWGG | 1 cut(s) | 129 |
| Eco24I | GRGCYC | 2 cut(s) | 204, 235 |
| Eco31I | GGTCTC | 1 cut(s) | 1601 |
| Eco47I | GGWCC | 1 cut(s) | 1359 |
| Eco53kI | GAGCTC | 2 cut(s) | 202, 233 |
| Eco57I | CTGAAG | 3 cut(s) | 71, 160, 770 |
| Eco88I | CYCGRG | 1 cut(s) | 1022 |
| EcoICRI | GAGCTC | 2 cut(s) | 202, 233 |
| EcoRI | GAATTC | 1 cut(s) | 1621 |
| EcoRII | CCWGG | 3 cut(s) | 57, 951, 1361 |
| EcoT14I | CCWWGG | 1 cut(s) | 129 |
| EcoT38I | GRGCYC | 2 cut(s) | 204, 235 |
| EgeI | GGCGCC | 1 cut(s) | 56 |
| EheI | GGCGCC | 1 cut(s) | 56 |
| ErhI | CCWWGG | 1 cut(s) | 129 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 484, 516 |
| FauNDI | CATATG | 1 cut(s) | 1090 |
| FbaI | TGATCA | 2 cut(s) | 220, 612 |
| Fnu4HI | GCNGC | 6 cut(s) | 31, 153, 167, 307, 1445, 1700 |
| FokI | GGATG | 4 cut(s) | 314, 806, 1146, 1690 |
| FriOI | GRGCYC | 2 cut(s) | 204, 235 |
| Fsp4HI | GCNGC | 6 cut(s) | 31, 153, 167, 307, 1445, 1700 |
| FspBI | CTAG | 5 cut(s) | 78, 408, 716, 1140, 1257 |
| GlaI | GCGC | 2 cut(s) | 56, 1775 |
| GluI | GCNGC | 6 cut(s) | 31, 153, 167, 307, 1445, 1700 |
| GsuI | CTGGAG | 1 cut(s) | 1389 |
| HaeII | RGCGCY | 1 cut(s) | 58 |
| HaeIII | GGCC | 3 cut(s) | 134, 1699, 1710 |
| HapII | CCGG | 6 cut(s) | 52, 120, 156, 1496, 1618, 1646 |
| HgaI | GACGC | 1 cut(s) | 1695 |
| HhaI | GCGC | 2 cut(s) | 57, 1776 |
| Hin1I | GRCGYC | 2 cut(s) | 44, 55 |
| Hin6I | GCGC | 2 cut(s) | 55, 1774 |
| HinP1I | GCGC | 2 cut(s) | 55, 1774 |
| HincII | GTYRAC | 1 cut(s) | 584 |
| HindII | GTYRAC | 1 cut(s) | 584 |
| HinfI | GANTC | 7 cut(s) | 23, 248, 317, 767, 1168, 1276, 1385 |
| HpaII | CCGG | 6 cut(s) | 52, 120, 156, 1496, 1618, 1646 |
| HphI | GGTGA | 5 cut(s) | 910, 1295, 1385, 1517, 1570 |
| Hpy166II | GTNNAC | 5 cut(s) | 83, 584, 901, 945, 1100 |
| Hpy188III | TCNNGA | 8 cut(s) | 422, 518, 655, 878, 1016, 1022, 1172, 1406 |
| Hpy8I | GTNNAC | 5 cut(s) | 83, 584, 901, 945, 1100 |
| Hpy99I | CGWCG | 3 cut(s) | 46, 49, 107 |
| HpyAV | CCTTC | 3 cut(s) | 745, 1088, 1476 |
| HpyCH4III | ACNGT | 4 cut(s) | 367, 399, 1133, 1721 |
| HpyCH4IV | ACGT | 3 cut(s) | 44, 237, 1368 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 97, 166, 199, 853, 872, 1453 |
| HpyF3I | CTNAG | 4 cut(s) | 560, 822, 978, 1432 |
| HpySE526I | ACGT | 3 cut(s) | 44, 237, 1368 |
| Hsp92I | GRCGYC | 2 cut(s) | 44, 55 |
| HspAI | GCGC | 2 cut(s) | 55, 1774 |
| KasI | GGCGCC | 1 cut(s) | 54 |
| Ksp22I | TGATCA | 2 cut(s) | 220, 612 |
| LmnI | GCTCC | 6 cut(s) | 131, 174, 218, 424, 1441, 1644 |
| Lsp1109I | GCAGC | 3 cut(s) | 178, 293, 1456 |
| LweI | GCATC | 2 cut(s) | 853, 1668 |
| MaeI | CTAG | 5 cut(s) | 78, 408, 716, 1140, 1257 |
| MaeII | ACGT | 3 cut(s) | 44, 237, 1368 |
| MaeIII | GTNAC | 3 cut(s) | 399, 1208, 1558 |
| MflI | RGATCY | 2 cut(s) | 1018, 1763 |
| MhlI | GDGCHC | 2 cut(s) | 204, 235 |
| MlsI | TGGCCA | 1 cut(s) | 1710 |
| MluCI | AATT | 8 cut(s) | 183, 205, 269, 788, 1028, 1154, 1321, 1621 |
| MluNI | TGGCCA | 1 cut(s) | 1710 |
| Mly113I | GGCGCC | 1 cut(s) | 55 |
| MlyI | GAGTC | 3 cut(s) | 257, 1177, 1285 |
| MmeI | TCCRAC | 1 cut(s) | 1108 |
| Mox20I | TGGCCA | 1 cut(s) | 1710 |
| MscI | TGGCCA | 1 cut(s) | 1710 |
| MseI | TTAA | 8 cut(s) | 435, 473, 540, 932, 999, 1007, 1515, 1785 |
| Msp20I | TGGCCA | 1 cut(s) | 1710 |
| MspCI | CTTAAG | 2 cut(s) | 472, 931 |
| MspI | CCGG | 6 cut(s) | 52, 120, 156, 1496, 1618, 1646 |
| MspR9I | CCNGG | 6 cut(s) | 59, 157, 953, 1363, 1496, 1647 |
| Mva1269I | GAATGC | 4 cut(s) | 417, 1079, 1352, 1689 |
| MvaI | CCWGG | 3 cut(s) | 59, 953, 1363 |
| MvnI | CGCG | 2 cut(s) | 519, 1702 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 97, 166, 199, 853, 872, 1453 |
| NarI | GGCGCC | 1 cut(s) | 55 |
| NciI | CCSGG | 3 cut(s) | 157, 1496, 1647 |
| NdeI | CATATG | 1 cut(s) | 1090 |
| NlaIV | GGNNCC | 7 cut(s) | 19, 56, 127, 214, 604, 1150, 1360 |
| NmeAIII | GCCGAG | 1 cut(s) | 579 |
| NmuCI | GTSAC | 1 cut(s) | 1558 |
| NruI | TCGCGA | 1 cut(s) | 519 |
| NspI | RCATGY | 1 cut(s) | 264 |
| PaeR7I | CTCGAG | 1 cut(s) | 1022 |
| PagI | TCATGA | 1 cut(s) | 654 |
| PciI | ACATGT | 1 cut(s) | 260 |
| PctI | GAATGC | 4 cut(s) | 417, 1079, 1352, 1689 |
| PfeI | GAWTC | 4 cut(s) | 23, 317, 767, 1385 |
| PfoI | TCCNGGA | 1 cut(s) | 1361 |
| PkrI | GCNGC | 6 cut(s) | 32, 154, 168, 308, 1446, 1701 |
| PleI | GAGTC | 3 cut(s) | 256, 1176, 1284 |
| PluTI | GGCGCC | 1 cut(s) | 58 |
| PpsI | GAGTC | 3 cut(s) | 256, 1176, 1284 |
| PscI | ACATGT | 1 cut(s) | 260 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1357 |
| Psp124BI | GAGCTC | 2 cut(s) | 204, 235 |
| Psp1406I | AACGTT | 1 cut(s) | 1368 |
| Psp6I | CCWGG | 3 cut(s) | 57, 951, 1361 |
| PspGI | CCWGG | 3 cut(s) | 57, 951, 1361 |
| PspN4I | GGNNCC | 7 cut(s) | 19, 56, 127, 214, 604, 1150, 1360 |
| PspPI | GGNCC | 1 cut(s) | 1359 |
| PstI | CTGCAG | 1 cut(s) | 1393 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1412 |
| PsuI | RGATCY | 2 cut(s) | 1018, 1763 |
| RruI | TCGCGA | 1 cut(s) | 519 |
| RsaI | GTAC | 2 cut(s) | 1099, 1135 |
| RsaNI | GTAC | 2 cut(s) | 1098, 1134 |
| SacI | GAGCTC | 2 cut(s) | 204, 235 |
| SaqAI | TTAA | 8 cut(s) | 435, 473, 540, 932, 999, 1007, 1515, 1785 |
| SatI | GCNGC | 6 cut(s) | 31, 153, 167, 307, 1445, 1700 |
| Sau96I | GGNCC | 1 cut(s) | 1359 |
| ScaI | AGTACT | 1 cut(s) | 1135 |
| SchI | GAGTC | 3 cut(s) | 257, 1177, 1285 |
| ScrFI | CCNGG | 6 cut(s) | 59, 157, 953, 1363, 1496, 1647 |
| SduI | GDGCHC | 2 cut(s) | 204, 235 |
| SfaNI | GCATC | 2 cut(s) | 853, 1668 |
| SfcI | CTRYAG | 3 cut(s) | 989, 1231, 1389 |
| SfoI | GGCGCC | 1 cut(s) | 56 |
| Sfr274I | CTCGAG | 1 cut(s) | 1022 |
| SinI | GGWCC | 1 cut(s) | 1359 |
| SlaI | CTCGAG | 1 cut(s) | 1022 |
| SmlI | CTYRAG | 7 cut(s) | 10, 245, 472, 931, 967, 1022, 1309 |
| SmoI | CTYRAG | 7 cut(s) | 10, 245, 472, 931, 967, 1022, 1309 |
| Sse9I | AATT | 8 cut(s) | 183, 205, 269, 788, 1028, 1154, 1321, 1621 |
| SsiI | CCGC | 7 cut(s) | 15, 31, 153, 172, 642, 719, 1700 |
| SspDI | GGCGCC | 1 cut(s) | 54 |
| SspI | AATATT | 1 cut(s) | 1012 |
| SspMI | CTAG | 5 cut(s) | 78, 408, 716, 1140, 1257 |
| SstI | GAGCTC | 2 cut(s) | 204, 235 |
| StyD4I | CCNGG | 6 cut(s) | 57, 155, 951, 1361, 1494, 1645 |
| StyI | CCWWGG | 1 cut(s) | 129 |
| TaaI | ACNGT | 4 cut(s) | 367, 399, 1133, 1721 |
| TaiI | ACGT | 3 cut(s) | 47, 240, 1371 |
| TaqI | TCGA | 5 cut(s) | 102, 229, 355, 783, 1023 |
| TasI | AATT | 8 cut(s) | 183, 205, 269, 788, 1028, 1154, 1321, 1621 |
| TatI | WGTACW | 1 cut(s) | 1133 |
| TauI | GCSGC | 3 cut(s) | 33, 155, 1702 |
| TfiI | GAWTC | 4 cut(s) | 23, 317, 767, 1385 |
| Tru1I | TTAA | 8 cut(s) | 435, 473, 540, 932, 999, 1007, 1515, 1785 |
| Tru9I | TTAA | 8 cut(s) | 435, 473, 540, 932, 999, 1007, 1515, 1785 |
| TscAI | CASTG | 3 cut(s) | 98, 142, 1170 |
| TseFI | GTSAC | 1 cut(s) | 1558 |
| TseI | GCWGC | 3 cut(s) | 166, 306, 1444 |
| Tsp45I | GTSAC | 1 cut(s) | 1558 |
| TspGWI | ACGGA | 3 cut(s) | 63, 320, 1117 |
| TspRI | CASTG | 3 cut(s) | 98, 142, 1170 |
| Vha464I | CTTAAG | 2 cut(s) | 472, 931 |
| VpaK11BI | GGWCC | 1 cut(s) | 1359 |
| XapI | RAATTY | 3 cut(s) | 183, 1028, 1621 |
| XceI | RCATGY | 1 cut(s) | 264 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 90 |
| XhoI | CTCGAG | 1 cut(s) | 1022 |
| XspI | CTAG | 5 cut(s) | 78, 408, 716, 1140, 1257 |
| ZraI | GACGTC | 1 cut(s) | 45 |
| ZrmI | AGTACT | 1 cut(s) | 1135 |