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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G28400 AT2G33850 |
| fragaria_vesca | FvH4_3g08671 FvH4_3g08671 FvH4_3g08671 |
| malus_domestica | MD05G1310400.v1.1 MD10G1289700.v1.1 |
| prunus_persica | Prupe.4G052000_v2.0.a1 Prupe.4G052200_v2.0.a1 Prupe.4G052200_v2.0.a1 |
| pyrus_communis | pycom05g28690 pycom10g24210 |
| rosa_laevigata | RLG00000031630 |
| rosa_multiflora | Rmu_sc0005923.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00067580 Rroxscaffold_4G00323090 |
| rosa_rugosa | Rorug04G0441200 |
| rosa_samantha | Rh5AG070600 Rh5BG067400 Rh5CG079300 Rh5DG067100 Rh6BG393700 Rh7AG154200 |
| rosa_wichuraiana | Rw5G006590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 246, 315, 318 |
| AcoI | YGGCCR | 1 cut(s) | 214 |
| AcuI | CTGAAG | 2 cut(s) | 70, 141 |
| AfaI | GTAC | 5 cut(s) | 431, 686, 731, 767, 854 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 136, 862 |
| AgsI | TTSAA | 2 cut(s) | 68, 756 |
| AjnI | CCWGG | 1 cut(s) | 741 |
| AleI | CACNNNNGTG | 1 cut(s) | 149 |
| AluBI | AGCT | 4 cut(s) | 71, 78, 127, 232 |
| AluI | AGCT | 4 cut(s) | 71, 78, 127, 232 |
| Alw21I | GWGCWC | 3 cut(s) | 129, 146, 750 |
| Alw26I | GTCTC | 3 cut(s) | 60, 212, 428 |
| AoxI | GGCC | 1 cut(s) | 214 |
| ApeKI | GCWGC | 3 cut(s) | 232, 472, 810 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 875 |
| AsuHPI | GGTGA | 1 cut(s) | 548 |
| BalI | TGGCCA | 1 cut(s) | 216 |
| BanII | GRGCYC | 1 cut(s) | 129 |
| BbsI | GAAGAC | 1 cut(s) | 888 |
| Bbv12I | GWGCWC | 3 cut(s) | 129, 146, 750 |
| BbvI | GCAGC | 3 cut(s) | 219, 484, 822 |
| BceAI | ACGGC | 2 cut(s) | 214, 254 |
| BciT130I | CCWGG | 1 cut(s) | 743 |
| BcoDI | GTCTC | 3 cut(s) | 60, 212, 428 |
| BfaI | CTAG | 1 cut(s) | 9 |
| BisI | GCNGC | 4 cut(s) | 233, 318, 473, 811 |
| BlsI | GCNGC | 4 cut(s) | 234, 319, 474, 812 |
| BmcAI | AGTACT | 1 cut(s) | 686 |
| Bme1390I | CCNGG | 1 cut(s) | 743 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmrFI | CCNGG | 1 cut(s) | 743 |
| BmsI | GCATC | 1 cut(s) | 256 |
| BpiI | GAAGAC | 1 cut(s) | 888 |
| BsaI | GGTCTC | 2 cut(s) | 212, 428 |
| BsaJI | CCNNGG | 1 cut(s) | 741 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 722, 752 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 136, 862 |
| Bse1I | ACTGG | 3 cut(s) | 727, 767, 889 |
| BseBI | CCWGG | 1 cut(s) | 743 |
| BseDI | CCNNGG | 1 cut(s) | 741 |
| BseGI | GGATG | 2 cut(s) | 180, 456 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 136, 862 |
| BseMII | CTCAG | 1 cut(s) | 630 |
| BseNI | ACTGG | 3 cut(s) | 727, 767, 889 |
| BseRI | GAGGAG | 2 cut(s) | 38, 878 |
| BseXI | GCAGC | 3 cut(s) | 219, 484, 822 |
| Bsh1285I | CGRYCG | 1 cut(s) | 264 |
| BshFI | GGCC | 1 cut(s) | 216 |
| BsiEI | CGRYCG | 1 cut(s) | 264 |
| BsiHKAI | GWGCWC | 3 cut(s) | 129, 146, 750 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 136, 862 |
| BsmAI | GTCTC | 3 cut(s) | 60, 212, 428 |
| BsnI | GGCC | 1 cut(s) | 216 |
| Bso31I | GGTCTC | 2 cut(s) | 212, 428 |
| Bsp1286I | GDGCHC | 3 cut(s) | 129, 146, 750 |
| BspACI | CCGC | 3 cut(s) | 246, 315, 318 |
| BspANI | GGCC | 1 cut(s) | 216 |
| BspCNI | CTCAG | 1 cut(s) | 631 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspQI | GCTCTTC | 1 cut(s) | 117 |
| BspTNI | GGTCTC | 2 cut(s) | 212, 428 |
| BsrI | ACTGG | 3 cut(s) | 727, 767, 889 |
| BssECI | CCNNGG | 1 cut(s) | 741 |
| Bst2UI | CCWGG | 1 cut(s) | 743 |
| Bst4CI | ACNGT | 2 cut(s) | 148, 536 |
| Bst6I | CTCTTC | 1 cut(s) | 117 |
| BstDEI | CTNAG | 1 cut(s) | 639 |
| BstF5I | GGATG | 2 cut(s) | 180, 456 |
| BstMAI | GTCTC | 3 cut(s) | 60, 212, 428 |
| BstMCI | CGRYCG | 1 cut(s) | 264 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 11, 472, 510 |
| BstNI | CCWGG | 1 cut(s) | 743 |
| BstSCI | CCNGG | 1 cut(s) | 741 |
| BstV1I | GCAGC | 3 cut(s) | 219, 484, 822 |
| BstV2I | GAAGAC | 1 cut(s) | 888 |
| BsuRI | GGCC | 1 cut(s) | 216 |
| BtsCI | GGATG | 2 cut(s) | 180, 456 |
| BtsIMutI | CAGTG | 3 cut(s) | 117, 144, 297 |
| Csp6I | GTAC | 5 cut(s) | 430, 685, 730, 766, 853 |
| CviAII | CATG | 3 cut(s) | 550, 652, 900 |
| CviQI | GTAC | 5 cut(s) | 430, 685, 730, 766, 853 |
| DdeI | CTNAG | 1 cut(s) | 639 |
| EaeI | YGGCCR | 1 cut(s) | 214 |
| Eam1104I | CTCTTC | 1 cut(s) | 117 |
| EarI | CTCTTC | 1 cut(s) | 117 |
| Ecl136II | GAGCTC | 1 cut(s) | 127 |
| Eco24I | GRGCYC | 1 cut(s) | 129 |
| Eco31I | GGTCTC | 2 cut(s) | 212, 428 |
| Eco53kI | GAGCTC | 1 cut(s) | 127 |
| Eco57I | CTGAAG | 2 cut(s) | 70, 141 |
| EcoICRI | GAGCTC | 1 cut(s) | 127 |
| EcoRII | CCWGG | 1 cut(s) | 741 |
| EcoT38I | GRGCYC | 1 cut(s) | 129 |
| FaeI | CATG | 3 cut(s) | 553, 655, 903 |
| FatI | CATG | 3 cut(s) | 549, 651, 899 |
| Fnu4HI | GCNGC | 4 cut(s) | 233, 318, 473, 811 |
| FokI | GGATG | 2 cut(s) | 167, 463 |
| FriOI | GRGCYC | 1 cut(s) | 129 |
| Fsp4HI | GCNGC | 4 cut(s) | 233, 318, 473, 811 |
| FspBI | CTAG | 1 cut(s) | 9 |
| GluI | GCNGC | 4 cut(s) | 233, 318, 473, 811 |
| HaeIII | GGCC | 1 cut(s) | 216 |
| Hin1II | CATG | 3 cut(s) | 553, 655, 903 |
| HindIII | AAGCTT | 1 cut(s) | 76 |
| HinfI | GANTC | 2 cut(s) | 221, 752 |
| HphI | GGTGA | 1 cut(s) | 548 |
| Hpy166II | GTNNAC | 3 cut(s) | 106, 567, 853 |
| Hpy188I | TCNGA | 1 cut(s) | 723 |
| Hpy188III | TCNNGA | 1 cut(s) | 756 |
| Hpy8I | GTNNAC | 3 cut(s) | 106, 567, 853 |
| HpyAV | CCTTC | 1 cut(s) | 187 |
| HpyCH4III | ACNGT | 2 cut(s) | 148, 536 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 11, 472, 510 |
| HpyF3I | CTNAG | 1 cut(s) | 639 |
| Hsp92II | CATG | 3 cut(s) | 553, 655, 903 |
| LguI | GCTCTTC | 1 cut(s) | 117 |
| LmnI | GCTCC | 2 cut(s) | 10, 132 |
| LpnPI | CCDG | 9 cut(s) | 47, 65, 718, 728, 740, 748, 755, 839, 869 |
| Lsp1109I | GCAGC | 3 cut(s) | 219, 484, 822 |
| LweI | GCATC | 1 cut(s) | 256 |
| MaeI | CTAG | 1 cut(s) | 9 |
| MaeIII | GTNAC | 6 cut(s) | 151, 455, 554, 581, 656, 800 |
| MboII | GAAGA | 7 cut(s) | 22, 25, 28, 73, 76, 134, 893 |
| MhlI | GDGCHC | 3 cut(s) | 129, 146, 750 |
| MlsI | TGGCCA | 1 cut(s) | 216 |
| MluNI | TGGCCA | 1 cut(s) | 216 |
| MlyI | GAGTC | 1 cut(s) | 215 |
| MmeI | TCCRAC | 1 cut(s) | 390 |
| Mox20I | TGGCCA | 1 cut(s) | 216 |
| MscI | TGGCCA | 1 cut(s) | 216 |
| MslI | CAYNNNNRTG | 1 cut(s) | 149 |
| Msp20I | TGGCCA | 1 cut(s) | 216 |
| MspR9I | CCNGG | 1 cut(s) | 743 |
| MvaI | CCWGG | 1 cut(s) | 743 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 11, 472, 510 |
| NlaIII | CATG | 3 cut(s) | 553, 655, 903 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NmuCI | GTSAC | 5 cut(s) | 151, 455, 554, 581, 656 |
| OliI | CACNNNNGTG | 1 cut(s) | 149 |
| PciSI | GCTCTTC | 1 cut(s) | 117 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 225, 891 |
| PfeI | GAWTC | 1 cut(s) | 752 |
| PkrI | GCNGC | 4 cut(s) | 234, 319, 474, 812 |
| PleI | GAGTC | 1 cut(s) | 215 |
| PpsI | GAGTC | 1 cut(s) | 215 |
| Psp124BI | GAGCTC | 1 cut(s) | 129 |
| Psp6I | CCWGG | 1 cut(s) | 741 |
| PspGI | CCWGG | 1 cut(s) | 741 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 398, 430 |
| RsaI | GTAC | 5 cut(s) | 431, 686, 731, 767, 854 |
| RsaNI | GTAC | 5 cut(s) | 430, 685, 730, 766, 853 |
| RseI | CAYNNNNRTG | 1 cut(s) | 149 |
| SacI | GAGCTC | 1 cut(s) | 129 |
| SapI | GCTCTTC | 1 cut(s) | 117 |
| SatI | GCNGC | 4 cut(s) | 233, 318, 473, 811 |
| ScaI | AGTACT | 1 cut(s) | 686 |
| SchI | GAGTC | 1 cut(s) | 215 |
| ScrFI | CCNGG | 1 cut(s) | 743 |
| SduI | GDGCHC | 3 cut(s) | 129, 146, 750 |
| SfaNI | GCATC | 1 cut(s) | 256 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 149 |
| SsiI | CCGC | 3 cut(s) | 246, 315, 318 |
| SspMI | CTAG | 1 cut(s) | 9 |
| SstI | GAGCTC | 1 cut(s) | 129 |
| StyD4I | CCNGG | 1 cut(s) | 741 |
| TaaI | ACNGT | 2 cut(s) | 148, 536 |
| TaqI | TCGA | 2 cut(s) | 73, 750 |
| TaqII | GACCGA | 1 cut(s) | 278 |
| TatI | WGTACW | 2 cut(s) | 684, 729 |
| TauI | GCSGC | 1 cut(s) | 320 |
| TfiI | GAWTC | 1 cut(s) | 752 |
| TscAI | CASTG | 3 cut(s) | 124, 151, 304 |
| TseFI | GTSAC | 5 cut(s) | 151, 455, 554, 581, 656 |
| TseI | GCWGC | 3 cut(s) | 232, 472, 810 |
| Tsp45I | GTSAC | 5 cut(s) | 151, 455, 554, 581, 656 |
| TspDTI | ATGAA | 2 cut(s) | 169, 351 |
| TspRI | CASTG | 3 cut(s) | 124, 151, 304 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 200 |
| XspI | CTAG | 1 cut(s) | 9 |
| ZrmI | AGTACT | 1 cut(s) | 686 |