Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0010903

Physical Location & Seq

Genomic Coordinates Forward (+)

6995730 .. 7001166

Gene Structure 5437 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g11840.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

ATGTCGAGGATTTGCGTCAAGAATTTGCCGAAGCACGTCGACGACAAGAAGCTCCGGGAGCTTTTCTCGGAGAAAGGAGAAGTCACGGACGCCAAGCTCATGCGCACCAGAGAAGGCAAGAGCCGCCAGTTCGCTTTCATAGGGTTCCGCTCCGAGCTTCAAGCTCAGGAGGCCATCAAGTACTTCAACAGAACCTTCGTCGATACTTACCGGATTAGCTGCGAGCTTGCTCGGAAGGTCGGCGATCCCGAGATTCCGAGGCCGTGGAGTCGCCACACGAAGGAGAAGGAGAAGAAAGAGAGTGAGGCCAGGGAAGGCGGTAATGCCGCGGCGGCGAAAAGCCGAAAAGGGAGGAGGAGTGAGAAGGAGGAGGAGATTGATGATCCTAAGCTTAAGGAGTTTTTGCAGGTGATGCAGCCGAGGGCTAAGTCGAAGTTGTGGTCGAATGACACGTTTGTTGATGCGAAAATCGGGAGAGGAGAGAGGAAGATGGAGGAGAGGAGGAAGGGGGATGAGGAGAAATCGGCGGCGGAGATGGATGTTGATGTGGAGGAGGAGGAGGATGTGGAGAAGGGTGAGTCACACAATGTTGCGAAGGATAATGTGGTTTCGGATATGGATTACTTCAAGAGTAGAGTGAAGAAGGATTGGTCGGATTCCGAGAGTAGTGACAGTGATGATGAAGAGGAGGAGGAGGAGAAGGAGAAGGAAGAGGAAGAAGAAGATGAGGTTGATGAAGGAGAGGAAGGCGTTGAGGAAGTTTCGGATGGAACTGTACTTGCGCAGAGTGATCCTTGGTCTACTTTGACAGATGAGAAAGATGAAATGCTTGATACTAGTCGGCTTTTTGTTCGAAATTTGCCATTTACAGCAACAGAGGATGAGTTGGAAGAGCATTTTAGGAAATTCGGGGATGCGCAAGTTCATCTTGTTATTGATAAAGAGTTAAATCGGTCCAAGGGAATTGCTTATGTTCTTTACTCGCAACCGAAATCGGTTCAAAGGGCATTAGAAGAATTAGACGGTTCAATTTTCCAAGGAAGACTGCTGCATGTTATGCCAGCAAAACAAAAACACCCATCTCCAGGGGCTGAAGATTTAGCGAACCAAGCTTCAAAGTCTCTTAAGCAACAAAGGGAGGAGAAGAAGAAAGCATCTGAAGCTAGCGGAGATACAAGAGCATGGAATAGTTTGTTTATACGCACTGAGACAGCCGTTGATCACTTGGCTCGGAAGTTTGGGGTGAGCAAGAGTGATTTTCTTGACCCGCAAGCTGATGATGTCGCTGTACGTGTTGCTCAAGCAGAGACACAAGTGATTGCACAGACAAAAAAGGCTCTTACAAACGCTGGTGTAAATGTAGAATCTTTAGAGAATTTTGCTGCCAGGAAAGCTGGTGATATGAAAAGAAGCAACCATGTTTTACTAGTGAAGAACTTGCCATATGGTTCTTCTGATAGTGAACTAGGAAACATGTTTGGGAAATTTGGGAGTTTGGAGAAGATCATTATGCCTCCGACAAAGACATTGGCTTTGGTTGTTTTTTTTGAACCTTCTGGAGCTCGTGCAGCTTTTAAAGGTCTGGCATACAAGAAATACAAGGATGTTCCTCTATATTTGGAATGGGCTCCTGGTGACGTTCTTAATCCAAGTTCAACAGCTGAGAGCAATGGAAAGAAGAATCCTGCTGTTGCTGAACTTCAGCAACTGGTGGAAGTAACACCAGACGATCTTGATCTTGATCCTGATAGAGTTGAGTCACGAACTCTATATGTCAAGAATTTGAACTTCAAGACTACTGACGAGAGCTTGAAGAAGCATTTTGAACAAGTGAAGGAGGGAAAAATATTAAGCGCCAAGGTGAAGAAACACATGAAAAAAGGGAAGAATCTTTCAATGGGATTTGGTTTTGTAGAATTTGACTCTGTGGAGACAGCCACAGAGGTTTGCAAGGGTTTACAGGGAACAATTTTGGATGGCCACCAACTTATTTTGCAACATTGTCATGCCAAGCAAGACGATGTGCCGAAAAAAGTTGTGAAGGACAAAAGTTCAACAAAAATACTTGTAAAAAATGTAGCCTTTGAGGCTACAAAGAAAGAGCTTCGACAGTTGTTTAGTACATATGGCGAGATTAAAAGCTTACGGTTACCAAACAGATTGGGACAGCATAGAGGCTTTGCATTTGTGGAGTTTGCCACTAAGCAAGAGGCAGAAAATGCCATTCAAGCGCTTGCAAGCACACATCTGTACGGTCGCCATCTGGTTCTGGAGAGAGCAAAGGAAGGTGAGACCTTGGAAGATTTAAGAGCTAGAGTAGCTGCTCAGTTCACGGATGACCAAAATACTGTTTCCAGGAAAAGGAAGGCTGTCGCAACCTTGGATGAAGATAACATGAGATTTGATATGACGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000028 GO:0000447 GO:0000460 GO:0000462 GO:0000466 GO:0000469 GO:0000472 GO:0000478 GO:0000479 GO:0000480 GO:0000966 GO:0000967 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0019843 GO:0022607 GO:0022613 GO:0022618 GO:0030490 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032991 GO:0034462 GO:0034470 GO:0034471 GO:0034622 GO:0034641 GO:0034660 GO:0042134 GO:0042254 GO:0042255 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0065003 GO:0070013 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1

Protein Analysis

806

Amino Acids

91.1

Weight (kDa)

5.67

Isoelectric Point (pI)

39.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	4 - 72	9.5e-15	RNA recognition motif
RRM_1	PF00076	282 - 350	3.1e-16	RNA recognition motif
RRM_1	PF00076	475 - 535	3.5e-07	RNA recognition motif
RRM_1	PF00076	590 - 663	3.6e-14	RNA recognition motif
RRM_1	PF00076	688 - 755	1.4e-18	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010903)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19610 AT5G05720 AT5G08695
fragaria_vesca	FvH4_3g11840
malus_domestica	MD05G1258600.v1.1 MD10G1238300.v1.1
prunus_persica	Prupe.4G106000_v2.0.a1
pyrus_communis	pycom10g19930
rosa_chinensis	RchiOBHm_Chr5g0019271
rosa_laevigata	RLG00000032433
rosa_multiflora	Rmu_sc0004608.1_g000004
rosa_roxburghii	Rroxscaffold_1G00058730 Rroxscaffold_1G00074200
rosa_rugosa	Rorug05G0049100 Rorug05G0049200
rosa_samantha	Rh5AG140200 Rh5BG139200 Rh5CG150600 Rh5DG139800
rosa_wichuraiana	Rw5G012470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	397
Acc16I	TGCGCA	3 cut(s)	104, 783, 918
Acc36I	ACCTGC	1 cut(s)	397
AccBSI	CCGCTC	1 cut(s)	150
AccI	GTMKAC	2 cut(s)	39, 800
AccII	CGCG	1 cut(s)	329
AclWI	GGATC	4 cut(s)	239, 377, 785, 1736
AcoI	YGGCCR	1 cut(s)	1978
AcsI	RAATTY	7 cut(s)	22, 856, 905, 1375, 1484, 1780, 1916
AcuI	CTGAAG	3 cut(s)	1113, 1179, 1685
AcyI	GRCGYC	1 cut(s)	90
AfaI	GTAC	5 cut(s)	182, 777, 1290, 2122, 2252
AfeI	AGCGCT	1 cut(s)	2232
AfiI	CCNNNNNNNGG	3 cut(s)	280, 1085, 2361
AflII	CTTAAG	2 cut(s)	392, 1124
AflIII	ACRYGT	3 cut(s)	450, 1291, 1473
AhlI	ACTAGT	2 cut(s)	836, 1426
AjiI	CACGTC	1 cut(s)	37
AjnI	CCWGG	5 cut(s)	308, 1084, 1385, 1630, 2354
Alw21I	GWGCWC	1 cut(s)	1564
Alw26I	GTCTC	5 cut(s)	1125, 1202, 1301, 1925, 2285
AlwI	GGATC	4 cut(s)	239, 377, 785, 1736
AlwNI	CAGNNNCTG	2 cut(s)	1091, 1708
Ama87I	CYCGRG	1 cut(s)	248
Aor51HI	AGCGCT	1 cut(s)	2232
AoxI	GGCC	4 cut(s)	171, 260, 306, 1978
ApeKI	GCWGC	6 cut(s)	219, 415, 1048, 1382, 1568, 2321
ApoI	RAATTY	7 cut(s)	22, 856, 905, 1375, 1484, 1780, 1916
ArsI	GACNNNNNNTTYG	4 cut(s)	425, 457, 1516, 1548
AspLEI	GCGC	5 cut(s)	105, 784, 919, 1856, 2233
AspS9I	GGNCC	1 cut(s)	954
AsuC2I	CCSGG	1 cut(s)	56
AsuHPI	GGTGA	7 cut(s)	421, 587, 1255, 1409, 1646, 1873, 2300
AsuII	TTCGAA	1 cut(s)	853
AsuNHI	GCTAGC	1 cut(s)	1163
AvaI	CYCGRG	1 cut(s)	248
AvaII	GGWCC	1 cut(s)	954
BalI	TGGCCA	1 cut(s)	1980
BanII	GRGCYC	2 cut(s)	1564, 1630
BauI	CACGAG	1 cut(s)	1563
BbsI	GAAGAC	1 cut(s)	1048
Bbv12I	GWGCWC	1 cut(s)	1564
BbvI	GCAGC	6 cut(s)	206, 427, 1035, 1369, 1580, 2308
BccI	CCATC	7 cut(s)	182, 484, 529, 761, 1087, 1970, 2268
BceAI	ACGGC	2 cut(s)	247, 1199
BciT130I	CCWGG	5 cut(s)	310, 1086, 1387, 1632, 2356
BclI	TGATCA	1 cut(s)	1219
BcnI	CCSGG	1 cut(s)	56
BcoDI	GTCTC	5 cut(s)	1125, 1202, 1301, 1925, 2285
BcuI	ACTAGT	2 cut(s)	836, 1426
BfaI	CTAG	5 cut(s)	837, 1164, 1427, 1466, 2313
BfoI	RGCGCY	2 cut(s)	1857, 2234
BfrI	CTTAAG	2 cut(s)	392, 1124
BfuAI	ACCTGC	1 cut(s)	397
BglI	GCCNNNNNGGC	2 cut(s)	332, 2087
BmcAI	AGTACT	1 cut(s)	182
Bme1390I	CCNGG	6 cut(s)	56, 310, 1086, 1387, 1632, 2356
Bme18I	GGWCC	1 cut(s)	954
BmeT110I	CYCGRG	1 cut(s)	248
BmgBI	CACGTC	1 cut(s)	37
BmgT120I	GGNCC	1 cut(s)	954
BmiI	GGNNCC	2 cut(s)	146, 1629
BmrFI	CCNGG	6 cut(s)	56, 310, 1086, 1387, 1632, 2356
BmsI	GCATC	4 cut(s)	402, 451, 904, 1163
BmtI	GCTAGC	1 cut(s)	1167
BpiI	GAAGAC	1 cut(s)	1048
BplI	GAGNNNNNCTC	2 cut(s)	50, 82
BpmI	CTGGAG	3 cut(s)	1068, 1578, 2291
Bpu10I	CCTNAGC	2 cut(s)	165, 387
Bpu14I	TTCGAA	1 cut(s)	853
BpuEI	CTTGAG	1 cut(s)	1284
BpuMI	CCSGG	1 cut(s)	56
BsaAI	YACGTR	1 cut(s)	1292
BsaBI	GATNNNNATC	2 cut(s)	1734, 1740
BsaHI	GRCGYC	1 cut(s)	90
BsaI	GGTCTC	1 cut(s)	2285
BsaWI	WCCGGW	1 cut(s)	210
BsaXI	ACNNNNNCTCC	2 cut(s)	343, 373
Bsc4I	CCNNNNNNNGG	3 cut(s)	280, 1085, 2361
Bse1I	ACTGG	2 cut(s)	127, 1713
Bse3DI	GCAATG	1 cut(s)	1675
Bse8I	GATNNNNATC	2 cut(s)	1734, 1740
BseBI	CCWGG	5 cut(s)	310, 1086, 1387, 1632, 2356
BseJI	GATNNNNATC	2 cut(s)	1734, 1740
BseLI	CCNNNNNNNGG	3 cut(s)	280, 1085, 2361
BseMI	GCAATG	1 cut(s)	1675
BseMII	CTCAG	4 cut(s)	179, 1197, 1653, 2339
BseNI	ACTGG	2 cut(s)	127, 1713
BseXI	GCAGC	6 cut(s)	206, 427, 1035, 1369, 1580, 2308
BsgI	GTGCAG	1 cut(s)	1587
Bsh1236I	CGCG	1 cut(s)	329
Bsh1285I	CGRYCG	1 cut(s)	2257
BshFI	GGCC	4 cut(s)	173, 262, 308, 1980
BsiEI	CGRYCG	1 cut(s)	2257
BsiHKAI	GWGCWC	1 cut(s)	1564
BsiHKCI	CYCGRG	1 cut(s)	248
BsiSI	CCGG	2 cut(s)	55, 211
BslFI	GGGAC	1 cut(s)	2178
BslI	CCNNNNNNNGG	3 cut(s)	280, 1085, 2361
BsmAI	GTCTC	5 cut(s)	1125, 1202, 1301, 1925, 2285
BsmFI	GGGAC	1 cut(s)	2178
BsnI	GGCC	4 cut(s)	173, 262, 308, 1980
Bso31I	GGTCTC	1 cut(s)	2285
BsoBI	CYCGRG	1 cut(s)	248
Bsp119I	TTCGAA	1 cut(s)	853
Bsp1286I	GDGCHC	2 cut(s)	1564, 1630
Bsp143I	GATC	8 cut(s)	244, 382, 790, 1219, 1503, 1729, 1735, 1741
BspANI	GGCC	4 cut(s)	173, 262, 308, 1980
BspCNI	CTCAG	4 cut(s)	178, 1198, 1654, 2338
BspFNI	CGCG	1 cut(s)	329
BspLI	GGNNCC	2 cut(s)	146, 1629
BspMI	ACCTGC	1 cut(s)	397
BspOI	GCTAGC	1 cut(s)	1167
BspPI	GGATC	4 cut(s)	239, 377, 785, 1736
BspQI	GCTCTTC	1 cut(s)	885
BspT104I	TTCGAA	1 cut(s)	853
BspTI	CTTAAG	2 cut(s)	392, 1124
BspTNI	GGTCTC	1 cut(s)	2285
BsrBI	CCGCTC	1 cut(s)	150
BsrDI	GCAATG	1 cut(s)	1675
BsrI	ACTGG	2 cut(s)	127, 1713
BssMI	GATC	8 cut(s)	244, 382, 790, 1219, 1503, 1729, 1735, 1741
BssNI	GRCGYC	1 cut(s)	90
BssSI	CACGAG	1 cut(s)	1563
BssT1I	CCWWGG	6 cut(s)	794, 957, 1036, 1857, 2295, 2379
Bst2BI	CACGAG	1 cut(s)	1563
Bst2UI	CCWGG	5 cut(s)	310, 1086, 1387, 1632, 2356
Bst4CI	ACNGT	7 cut(s)	674, 775, 1025, 2112, 2148, 2255, 2350
Bst6I	CTCTTC	3 cut(s)	678, 705, 885
BstACI	GRCGYC	1 cut(s)	90
BstAFI	CTTAAG	2 cut(s)	392, 1124
BstAPI	GCANNNNNTGC	3 cut(s)	412, 1057, 2219
BstBAI	YACGTR	1 cut(s)	1292
BstBI	TTCGAA	1 cut(s)	853
BstC8I	GCNNGC	7 cut(s)	224, 228, 1062, 1165, 1272, 2235, 2239
BstDEI	CTNAG	7 cut(s)	165, 387, 426, 1206, 1662, 2202, 2325
BstDSI	CCRYGG	2 cut(s)	263, 327
BstEII	GGTNACC	1 cut(s)	2148
BstFNI	CGCG	1 cut(s)	329
BstH2I	RGCGCY	2 cut(s)	1857, 2234
BstHHI	GCGC	5 cut(s)	105, 784, 919, 1856, 2233
BstKTI	GATC	8 cut(s)	247, 385, 793, 1222, 1506, 1732, 1738, 1744
BstMAI	GTCTC	5 cut(s)	1125, 1202, 1301, 1925, 2285
BstMBI	GATC	8 cut(s)	244, 382, 790, 1219, 1503, 1729, 1735, 1741
BstMCI	CGRYCG	1 cut(s)	2257
BstNI	CCWGG	5 cut(s)	310, 1086, 1387, 1632, 2356
BstNSI	RCATGY	2 cut(s)	1055, 1477
BstPI	GGTNACC	1 cut(s)	2148
BstSCI	CCNGG	6 cut(s)	54, 308, 1084, 1385, 1630, 2354
BstUI	CGCG	1 cut(s)	329
BstV1I	GCAGC	6 cut(s)	206, 427, 1035, 1369, 1580, 2308
BstV2I	GAAGAC	1 cut(s)	1048
BsuRI	GGCC	4 cut(s)	173, 262, 308, 1980
BtgI	CCRYGG	2 cut(s)	263, 327
BtrI	CACGTC	1 cut(s)	37
BtsIMutI	CAGTG	2 cut(s)	679, 1203
BveI	ACCTGC	1 cut(s)	397
Cac8I	GCNNGC	7 cut(s)	224, 228, 1062, 1165, 1272, 2235, 2239
CaiI	CAGNNNCTG	2 cut(s)	1091, 1708
CfoI	GCGC	5 cut(s)	105, 784, 919, 1856, 2233
Cfr13I	GGNCC	1 cut(s)	954
Cfr42I	CCGCGG	1 cut(s)	330
CseI	GACGC	2 cut(s)	4, 98
Csp6I	GTAC	5 cut(s)	181, 776, 1289, 2121, 2251
CviAII	CATG	8 cut(s)	100, 1052, 1182, 1418, 1474, 1873, 2006, 2395
CviQI	GTAC	5 cut(s)	181, 776, 1289, 2121, 2251
DdeI	CTNAG	7 cut(s)	165, 387, 426, 1206, 1662, 2202, 2325
DpnI	GATC	8 cut(s)	246, 384, 792, 1221, 1505, 1731, 1737, 1743
DpnII	GATC	8 cut(s)	244, 382, 790, 1219, 1503, 1729, 1735, 1741
DraI	TTTAAA	1 cut(s)	1576
EaeI	YGGCCR	1 cut(s)	1978
Eam1104I	CTCTTC	3 cut(s)	678, 705, 885
EarI	CTCTTC	3 cut(s)	678, 705, 885
EciI	GGCGGA	1 cut(s)	545
Ecl136II	GAGCTC	1 cut(s)	1562
Eco130I	CCWWGG	6 cut(s)	794, 957, 1036, 1857, 2295, 2379
Eco24I	GRGCYC	2 cut(s)	1564, 1630
Eco31I	GGTCTC	1 cut(s)	2285
Eco47I	GGWCC	1 cut(s)	954
Eco47III	AGCGCT	1 cut(s)	2232
Eco53kI	GAGCTC	1 cut(s)	1562
Eco57I	CTGAAG	3 cut(s)	1113, 1179, 1685
Eco88I	CYCGRG	1 cut(s)	248
Eco91I	GGTNACC	1 cut(s)	2148
EcoICRI	GAGCTC	1 cut(s)	1562
EcoO65I	GGTNACC	1 cut(s)	2148
EcoRII	CCWGG	5 cut(s)	308, 1084, 1385, 1630, 2354
EcoT14I	CCWWGG	6 cut(s)	794, 957, 1036, 1857, 2295, 2379
EcoT38I	GRGCYC	2 cut(s)	1564, 1630
ErhI	CCWWGG	6 cut(s)	794, 957, 1036, 1857, 2295, 2379
FaeI	CATG	8 cut(s)	103, 1055, 1185, 1421, 1477, 1876, 2009, 2398
FalI	AAGNNNNNCTT	2 cut(s)	912, 944
FaqI	GGGAC	1 cut(s)	2178
FatI	CATG	8 cut(s)	99, 1051, 1181, 1417, 1473, 1872, 2005, 2394
FauI	CCCGC	1 cut(s)	1275
FauNDI	CATATG	2 cut(s)	1444, 2125
FbaI	TGATCA	1 cut(s)	1219
FblI	GTMKAC	2 cut(s)	39, 800
FriOI	GRGCYC	2 cut(s)	1564, 1630
FspAI	RTGCGCAY	1 cut(s)	104
FspBI	CTAG	5 cut(s)	837, 1164, 1427, 1466, 2313
FspI	TGCGCA	3 cut(s)	104, 783, 918
GlaI	GCGC	5 cut(s)	104, 783, 918, 1855, 2232
GsuI	CTGGAG	3 cut(s)	1068, 1578, 2291
HaeII	RGCGCY	2 cut(s)	1857, 2234
HaeIII	GGCC	4 cut(s)	173, 262, 308, 1980
HapII	CCGG	2 cut(s)	55, 211
HgaI	GACGC	2 cut(s)	4, 98
HhaI	GCGC	5 cut(s)	105, 784, 919, 1856, 2233
Hin1I	GRCGYC	1 cut(s)	90
Hin1II	CATG	8 cut(s)	103, 1055, 1185, 1421, 1477, 1876, 2009, 2398
Hin6I	GCGC	5 cut(s)	103, 782, 917, 1854, 2231
HinP1I	GCGC	5 cut(s)	103, 782, 917, 1854, 2231
HincII	GTYRAC	1 cut(s)	40
HindII	GTYRAC	1 cut(s)	40
HindIII	AAGCTT	3 cut(s)	389, 1110, 2140
HinfI	GANTC	9 cut(s)	253, 268, 578, 656, 1364, 1681, 1757, 1888, 1922
HpaII	CCGG	2 cut(s)	55, 211
HphI	GGTGA	7 cut(s)	421, 587, 1255, 1409, 1646, 1873, 2300
Hpy166II	GTNNAC	5 cut(s)	40, 801, 1463, 1958, 2331
Hpy8I	GTNNAC	5 cut(s)	40, 801, 1463, 1958, 2331
Hpy99I	CGWCG	3 cut(s)	41, 44, 203
HpyCH4III	ACNGT	7 cut(s)	674, 775, 1025, 2112, 2148, 2255, 2350
HpyCH4IV	ACGT	4 cut(s)	36, 452, 1291, 1638
HpyCH4V	TGCA	9 cut(s)	406, 415, 1051, 1322, 1568, 1950, 1996, 2183, 2237
HpyF3I	CTNAG	7 cut(s)	165, 387, 426, 1206, 1662, 2202, 2325
HpySE526I	ACGT	4 cut(s)	36, 452, 1291, 1638
Hsp92I	GRCGYC	1 cut(s)	90
Hsp92II	CATG	8 cut(s)	103, 1055, 1185, 1421, 1477, 1876, 2009, 2398
HspAI	GCGC	5 cut(s)	103, 782, 917, 1854, 2231
Ksp22I	TGATCA	1 cut(s)	1219
KspI	CCGCGG	1 cut(s)	330
Kzo9I	GATC	8 cut(s)	244, 382, 790, 1219, 1503, 1729, 1735, 1741
LguI	GCTCTTC	1 cut(s)	885
LmnI	GCTCC	5 cut(s)	57, 58, 155, 1559, 1633
Lsp1109I	GCAGC	6 cut(s)	206, 427, 1035, 1369, 1580, 2308
LweI	GCATC	4 cut(s)	402, 451, 904, 1163
MaeI	CTAG	5 cut(s)	837, 1164, 1427, 1466, 2313
MaeII	ACGT	4 cut(s)	36, 452, 1291, 1638
MaeIII	GTNAC	7 cut(s)	82, 579, 668, 1634, 1717, 1758, 2148
MalI	GATC	8 cut(s)	246, 384, 792, 1221, 1505, 1731, 1737, 1743
MbiI	CCGCTC	1 cut(s)	150
MboI	GATC	8 cut(s)	244, 382, 790, 1219, 1503, 1729, 1735, 1741
MhlI	GDGCHC	2 cut(s)	1564, 1630
MlsI	TGGCCA	1 cut(s)	1980
MluNI	TGGCCA	1 cut(s)	1980
MlyI	GAGTC	4 cut(s)	277, 587, 1766, 1916
MmeI	TCCRAC	3 cut(s)	633, 867, 1541
Mox20I	TGGCCA	1 cut(s)	1980
MscI	TGGCCA	1 cut(s)	1980
MseI	TTAA	8 cut(s)	393, 947, 1125, 1575, 1644, 1850, 2136, 2306
MslI	CAYNNNNRTG	1 cut(s)	2004
Msp20I	TGGCCA	1 cut(s)	1980
MspA1I	CMGCKG	2 cut(s)	329, 1661
MspCI	CTTAAG	2 cut(s)	392, 1124
MspI	CCGG	2 cut(s)	55, 211
MspR9I	CCNGG	6 cut(s)	56, 310, 1086, 1387, 1632, 2356
MvaI	CCWGG	5 cut(s)	310, 1086, 1387, 1632, 2356
MvnI	CGCG	1 cut(s)	329
NciI	CCSGG	1 cut(s)	56
NdeI	CATATG	2 cut(s)	1444, 2125
NdeII	GATC	8 cut(s)	244, 382, 790, 1219, 1503, 1729, 1735, 1741
NheI	GCTAGC	1 cut(s)	1163
NlaIII	CATG	8 cut(s)	103, 1055, 1185, 1421, 1477, 1876, 2009, 2398
NlaIV	GGNNCC	2 cut(s)	146, 1629
NmeAIII	GCCGAG	1 cut(s)	444
NmuCI	GTSAC	5 cut(s)	82, 579, 668, 1634, 1758
NsbI	TGCGCA	3 cut(s)	104, 783, 918
NspI	RCATGY	2 cut(s)	1055, 1477
NspV	TTCGAA	1 cut(s)	853
PaqCI	CACCTGC	1 cut(s)	397
PciI	ACATGT	1 cut(s)	1473
PciSI	GCTCTTC	1 cut(s)	885
PcsI	WCGNNNNNNNCGW	2 cut(s)	246, 449
PfeI	GAWTC	5 cut(s)	253, 656, 1364, 1681, 1888
PfoI	TCCNGGA	2 cut(s)	54, 2354
PleI	GAGTC	4 cut(s)	276, 586, 1765, 1916
PpsI	GAGTC	4 cut(s)	276, 586, 1765, 1916
Ppu21I	YACGTR	1 cut(s)	1292
PscI	ACATGT	1 cut(s)	1473
Psp124BI	GAGCTC	1 cut(s)	1564
Psp6I	CCWGG	5 cut(s)	308, 1084, 1385, 1630, 2354
PspEI	GGTNACC	1 cut(s)	2148
PspGI	CCWGG	5 cut(s)	308, 1084, 1385, 1630, 2354
PspN4I	GGNNCC	2 cut(s)	146, 1629
PspPI	GGNCC	1 cut(s)	954
PstNI	CAGNNNCTG	2 cut(s)	1091, 1708
PvuII	CAGCTG	1 cut(s)	1661
RsaI	GTAC	5 cut(s)	182, 777, 1290, 2122, 2252
RsaNI	GTAC	5 cut(s)	181, 776, 1289, 2121, 2251
RseI	CAYNNNNRTG	1 cut(s)	2004
SacI	GAGCTC	1 cut(s)	1564
SacII	CCGCGG	1 cut(s)	330
SalI	GTCGAC	1 cut(s)	38
SapI	GCTCTTC	1 cut(s)	885
SaqAI	TTAA	8 cut(s)	393, 947, 1125, 1575, 1644, 1850, 2136, 2306
Sau3AI	GATC	8 cut(s)	244, 382, 790, 1219, 1503, 1729, 1735, 1741
Sau96I	GGNCC	1 cut(s)	954
ScaI	AGTACT	1 cut(s)	182
SchI	GAGTC	4 cut(s)	277, 587, 1766, 1916
ScrFI	CCNGG	6 cut(s)	56, 310, 1086, 1387, 1632, 2356
SduI	GDGCHC	2 cut(s)	1564, 1630
SfaNI	GCATC	4 cut(s)	402, 451, 904, 1163
Sfr303I	CCGCGG	1 cut(s)	330
SfuI	TTCGAA	1 cut(s)	853
SgrBI	CCGCGG	1 cut(s)	330
SgrDI	CGTCGACG	1 cut(s)	38
SinI	GGWCC	1 cut(s)	954
SmiMI	CAYNNNNRTG	1 cut(s)	2004
SmlI	CTYRAG	3 cut(s)	392, 1124, 1299
SmoI	CTYRAG	3 cut(s)	392, 1124, 1299
SpeI	ACTAGT	2 cut(s)	836, 1426
SspI	AATATT	1 cut(s)	1848
SspMI	CTAG	5 cut(s)	837, 1164, 1427, 1466, 2313
SstI	GAGCTC	1 cut(s)	1564
StyD4I	CCNGG	6 cut(s)	54, 308, 1084, 1385, 1630, 2354
StyI	CCWWGG	6 cut(s)	794, 957, 1036, 1857, 2295, 2379
TaaI	ACNGT	7 cut(s)	674, 775, 1025, 2112, 2148, 2255, 2350
TaiI	ACGT	4 cut(s)	39, 455, 1294, 1641
TaqI	TCGA	7 cut(s)	5, 39, 201, 431, 443, 853, 2107
TaqII	GACCGA	1 cut(s)	942
TatI	WGTACW	3 cut(s)	180, 775, 2120
TauI	GCSGC	5 cut(s)	126, 329, 332, 335, 530
TfiI	GAWTC	5 cut(s)	253, 656, 1364, 1681, 1888
Tru1I	TTAA	8 cut(s)	393, 947, 1125, 1575, 1644, 1850, 2136, 2306
Tru9I	TTAA	8 cut(s)	393, 947, 1125, 1575, 1644, 1850, 2136, 2306
TscAI	CASTG	2 cut(s)	679, 1210
TseFI	GTSAC	5 cut(s)	82, 579, 668, 1634, 1758
TseI	GCWGC	6 cut(s)	219, 415, 1048, 1382, 1568, 2321
Tsp45I	GTSAC	5 cut(s)	82, 579, 668, 1634, 1758
TspDTI	ATGAA	8 cut(s)	127, 696, 750, 837, 914, 1418, 1889, 2400
TspGWI	ACGGA	2 cut(s)	101, 2348
TspRI	CASTG	2 cut(s)	679, 1210
Vha464I	CTTAAG	2 cut(s)	392, 1124
VpaK11BI	GGWCC	1 cut(s)	954
XapI	RAATTY	7 cut(s)	22, 856, 905, 1375, 1484, 1780, 1916
XceI	RCATGY	2 cut(s)	1055, 1477
XmiI	GTMKAC	2 cut(s)	39, 800
XspI	CTAG	5 cut(s)	837, 1164, 1427, 1466, 2313
ZrmI	AGTACT	1 cut(s)	182

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.