Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0010903

Physical Location & Seq

Genomic Coordinates Forward (+)

14319920 .. 14325947

Gene Structure 6028 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG139200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGTCGTCGAGGATTTGCGTCAAGAATTTGCCGAAACACGTCGACGATAAGAAGCTCCGGGAGCTTTTCTCCGAGAAAGGAGAAGTCACGGACGCCAAGCTCATGCGAACCAAGGAAGGCAAGAGCCGCCAGTTCGCTTTCATAGGGTTCCGCTCTGAGCTTCAAGCTCAGGAGGCCATCAAATACTTCAATAAAACTTTTATTGATACTTACCGGATTAGTTGTGAGCTTGCTCGGAAAGTTGGGGATCCCGAGATTCCGAGGCCGTGGAGTCGACATACTAAGGAGAAAGAGAAGGAGAAGGAGAAGAGAGAGAGTGAAGGTGCTGCCGCGGCGGAGGCGAAAAGCCGGAGCGGAGTGGGAGGGAAGAGGAGTGAGGATGAGGATGAGATTGATGATCCTAAGCTGAAGGAGTTTTTGCAGGTGATGCAGCCTAGGGCTAAGTCGAAATTGTGGTCGAATGACACTGTGATTGCTAAAGTTGAGGGGAAAATTGGGAAAGGAGAGAAGAAGAGAGAGCAGAGGAAGAAGGGGAATGAAGAGAGTTTGGCGACGATGGATGTGGAGGTAGAGGAGGAAGTGGAGAAGGATGATTCGCACAATGTGGCCAAGGATAATGTGGTTTCGGATATGGATTACTTCAAGAGTAGAGTGAAGAAGGATTGGTCGGATTCCGAAAGTAGTGACAGTGATGATGAGGAAGAGGAGGAGGAGGAAGGTGAAGAATTAGATGCGAAGGAAGAAGCTGAGGTTAATGAAGAAGAGGCAGGAGAGGAACAAGTACTTGCACAGAGTAATCCTTCGTCCAGTTTGAAAGATGAGAAAGATGAAATGCTTGATACTAGTCGGCTTTTTGTTCGAAATTTGCCATTTACAGCAACAGAGGACGAGTTGGAAGAGCATTTTAGCAAATTCGGGGATGCACAAGTTCATCTTGTTATTGATAAAGAAATGAATCGGTCCAAGGGCATTGCTTATGTTCTTTACTCGCATCCAGAATCGGCACAAAGGGCATTAGAAGAATTAGACGGTTCAATTTTTCAAGGAAGATTGTTGCATGTTATGCCAGCAAAACAAAAAAACCCGTCTCCAGGGGCTGATGATTCAGCAAACCAAGCTTCAAAGTCTCTTAAGCAACAAAGGGAGGAGAAGAGGAAAGCATCCGAAGCTAGTGGAGATACACGAGCATGGAATAGTTTGTTTATACGCACTGAGACGGCTGTTGATCACTTAGCTCGGAAGTTTGGGGTGAGCAAGAGTGATTTTCTTGACCCGCAAGCTGATGATGTCGCTGTACGTGTTGCTCAAGCAGAGACACAAGTGATTGCACAGACAAAAAAGGCTCTTACAAATGCTGGTGTAAATGTAGAATCTTTAGAGAATTTTGCTGCTGGGAAAGGTGGTGATATGAAAAGAAGCAACCATGTTATACTTGTGAAAAACTTGCCATATGGTTCTTCTGATAGTGAACTAGGAAACATGTTTGGAAAATTTGGGAGTTTTGAAAAAATCATTATGCCTCCGACAAAGACATTGGCGTTGGTTGTTTTTTTTGAACCTTCTGGAGCTCGAGCAGCTTTTAAAGGTTTGGCGTACAAGAAATACAAGGATGTTCCTCTATATTTGGAATGGGCTCCTGGCAATGTTCTTAGTCCAATTTCAACAGCTGAGAGCAATGAAAAGAAGCATTCTGCTGTTGCTGAACATAATCCACTGGTGGAAGGAACTCCAGATGATCTTGATCTTGATCCTGATAGAGTTGAGTCACGAACTCTATATGTCAAGAATTTGAACTTCAAGACATCTGATGAGAGCTTGAAGAAGCATTTTGAACAAGTGAAGGAGGGAAGAATATTGAGCGCCAAGGTGAAGAAACACTTGAAAAAAGGGAAGAATCTTTCAATGGGATTTGGTTTTGTAGAATTTGACTCTGTGGAGACAGCCACAGAGGTTTGCAAGGGTTTACAGGTGAAGCCAAGAGTCCGGTCAAAATTATTTGCTTCTTATATGCAATTTTTGGAAATTAATTCCACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000028 GO:0000447 GO:0000460 GO:0000462 GO:0000466 GO:0000469 GO:0000472 GO:0000478 GO:0000479 GO:0000480 GO:0000966 GO:0000967 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0019843 GO:0022607 GO:0022613 GO:0022618 GO:0030490 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032991 GO:0034462 GO:0034470 GO:0034471 GO:0034622 GO:0034641 GO:0034660 GO:0042134 GO:0042254 GO:0042255 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0065003 GO:0070013 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1

Protein Analysis

678

Amino Acids

76.22

Weight (kDa)

5.54

Isoelectric Point (pI)

40.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	5 - 73	3.9e-15	RNA recognition motif
RRM_1	PF00076	284 - 352	5.4e-18	RNA recognition motif
RRM_1	PF00076	477 - 537	1.4e-07	RNA recognition motif
RRM_1	PF00076	592 - 656	2e-10	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010903)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19610 AT5G05720 AT5G08695
fragaria_vesca	FvH4_3g11840
malus_domestica	MD05G1258600.v1.1 MD10G1238300.v1.1
prunus_persica	Prupe.4G106000_v2.0.a1
pyrus_communis	pycom10g19930
rosa_chinensis	RchiOBHm_Chr5g0019271
rosa_laevigata	RLG00000032433
rosa_multiflora	Rmu_sc0004608.1_g000004
rosa_roxburghii	Rroxscaffold_1G00058730 Rroxscaffold_1G00074200
rosa_rugosa	Rorug05G0049100 Rorug05G0049200
rosa_samantha	Rh5AG140200 Rh5BG139200 Rh5CG150600 Rh5DG139800
rosa_wichuraiana	Rw5G012470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	412
Acc36I	ACCTGC	1 cut(s)	412
AccBSI	CCGCTC	2 cut(s)	153, 354
AccI	GTMKAC	2 cut(s)	42, 274
AccII	CGCG	1 cut(s)	332
AciI	CCGC	7 cut(s)	127, 151, 330, 332, 335, 354, 1274
AclWI	GGATC	4 cut(s)	242, 255, 392, 1742
AcoI	YGGCCR	1 cut(s)	606
AcsI	RAATTY	7 cut(s)	25, 862, 911, 1381, 1490, 1786, 1922
AcuI	CTGAAG	1 cut(s)	428
AcyI	GRCGYC	1 cut(s)	93
AdeI	CACNNNGTG	1 cut(s)	604
AfaI	GTAC	3 cut(s)	783, 1296, 1595
AfiI	CCNNNNNNNGG	1 cut(s)	1091
AflII	CTTAAG	1 cut(s)	1130
AflIII	ACRYGT	3 cut(s)	37, 1297, 1479
AhlI	ACTAGT	1 cut(s)	842
AjiI	CACGTC	1 cut(s)	40
AjnI	CCWGG	2 cut(s)	1090, 1636
Alw21I	GWGCWC	1 cut(s)	1570
Alw26I	GTCTC	5 cut(s)	1092, 1131, 1208, 1307, 1931
AlwI	GGATC	4 cut(s)	242, 255, 392, 1742
AlwNI	CAGNNNCTG	1 cut(s)	1097
Ama87I	CYCGRG	2 cut(s)	251, 1569
AoxI	GGCC	3 cut(s)	174, 263, 606
ApeKI	GCWGC	4 cut(s)	326, 430, 1388, 1574
ApoI	RAATTY	7 cut(s)	25, 862, 911, 1381, 1490, 1786, 1922
ArsI	GACNNNNNNTTYG	2 cut(s)	440, 472
AseI	ATTAAT	1 cut(s)	2025
AspA2I	CCTAGG	1 cut(s)	434
AspLEI	GCGC	1 cut(s)	1862
AspS9I	GGNCC	1 cut(s)	960
AsuC2I	CCSGG	1 cut(s)	59
AsuHPI	GGTGA	6 cut(s)	436, 731, 1261, 1415, 1879, 1981
AsuII	TTCGAA	1 cut(s)	859
AvaI	CYCGRG	2 cut(s)	251, 1569
AvaII	GGWCC	1 cut(s)	960
AvrII	CCTAGG	1 cut(s)	434
BalI	TGGCCA	1 cut(s)	608
BamHI	GGATCC	1 cut(s)	247
BanII	GRGCYC	2 cut(s)	1570, 1636
BauI	CACGAG	1 cut(s)	1182
Bbv12I	GWGCWC	1 cut(s)	1570
BbvCI	CCTCAGC	1 cut(s)	747
BbvI	GCAGC	4 cut(s)	313, 442, 1375, 1586
BccI	CCATC	2 cut(s)	185, 550
BceAI	ACGGC	2 cut(s)	250, 1233
BciT130I	CCWGG	2 cut(s)	1092, 1638
BclI	TGATCA	1 cut(s)	1225
BcnI	CCSGG	1 cut(s)	59
BcoDI	GTCTC	5 cut(s)	1092, 1131, 1208, 1307, 1931
BcuI	ACTAGT	1 cut(s)	842
BfaI	CTAG	4 cut(s)	435, 843, 1170, 1472
BfoI	RGCGCY	1 cut(s)	1863
BfrI	CTTAAG	1 cut(s)	1130
BfuAI	ACCTGC	1 cut(s)	412
BisI	GCNGC	7 cut(s)	127, 327, 330, 333, 431, 1389, 1575
BlnI	CCTAGG	1 cut(s)	434
BlsI	GCNGC	7 cut(s)	128, 328, 331, 334, 432, 1390, 1576
BmcAI	AGTACT	1 cut(s)	783
Bme1390I	CCNGG	3 cut(s)	59, 1092, 1638
Bme18I	GGWCC	1 cut(s)	960
BmeT110I	CYCGRG	2 cut(s)	251, 1569
BmgBI	CACGTC	1 cut(s)	40
BmgT120I	GGNCC	1 cut(s)	960
BmiI	GGNNCC	3 cut(s)	149, 249, 1635
BmrFI	CCNGG	3 cut(s)	59, 1092, 1638
BmsI	GCATC	5 cut(s)	417, 721, 910, 1000, 1169
BplI	GAGNNNNNCTC	2 cut(s)	53, 85
BpmI	CTGGAG	3 cut(s)	1074, 1584, 1713
Bpu10I	CCTNAGC	3 cut(s)	168, 402, 747
Bpu14I	TTCGAA	1 cut(s)	859
BpuEI	CTTGAG	1 cut(s)	1290
BpuMI	CCSGG	1 cut(s)	59
BsaAI	YACGTR	1 cut(s)	1298
BsaBI	GATNNNNATC	2 cut(s)	1740, 1746
BsaHI	GRCGYC	1 cut(s)	93
BsaJI	CCNNGG	9 cut(s)	111, 260, 266, 330, 434, 609, 963, 1091, 1863
BsaWI	WCCGGW	2 cut(s)	213, 1983
Bsc4I	CCNNNNNNNGG	1 cut(s)	1091
Bse1I	ACTGG	3 cut(s)	130, 807, 1719
Bse3DI	GCAATG	3 cut(s)	969, 1648, 1681
Bse8I	GATNNNNATC	2 cut(s)	1740, 1746
BseBI	CCWGG	2 cut(s)	1092, 1638
BseDI	CCNNGG	9 cut(s)	111, 260, 266, 330, 434, 609, 963, 1091, 1863
BseGI	GGATG	8 cut(s)	385, 391, 565, 595, 925, 991, 1160, 1615
BseJI	GATNNNNATC	2 cut(s)	1740, 1746
BseLI	CCNNNNNNNGG	1 cut(s)	1091
BseMI	GCAATG	3 cut(s)	969, 1648, 1681
BseMII	CTCAG	5 cut(s)	147, 182, 738, 1203, 1659
BseNI	ACTGG	3 cut(s)	130, 807, 1719
BseRI	GAGGAG	6 cut(s)	385, 587, 719, 722, 725, 1160
BseXI	GCAGC	4 cut(s)	313, 442, 1375, 1586
BseYI	CCCAGC	1 cut(s)	1391
Bsh1236I	CGCG	1 cut(s)	332
BshFI	GGCC	3 cut(s)	176, 265, 608
BsiHKAI	GWGCWC	1 cut(s)	1570
BsiHKCI	CYCGRG	2 cut(s)	251, 1569
BsiSI	CCGG	4 cut(s)	58, 214, 349, 1984
BslI	CCNNNNNNNGG	1 cut(s)	1091
BsmAI	GTCTC	5 cut(s)	1092, 1131, 1208, 1307, 1931
BsmBI	CGTCTC	2 cut(s)	1092, 1208
BsmI	GAATGC	1 cut(s)	1687
BsnI	GGCC	3 cut(s)	176, 265, 608
BsoBI	CYCGRG	2 cut(s)	251, 1569
Bsp119I	TTCGAA	1 cut(s)	859
Bsp1286I	GDGCHC	2 cut(s)	1570, 1636
Bsp143I	GATC	6 cut(s)	247, 397, 1225, 1735, 1741, 1747
BspACI	CCGC	7 cut(s)	127, 151, 330, 332, 335, 354, 1274
BspANI	GGCC	3 cut(s)	176, 265, 608
BspCNI	CTCAG	5 cut(s)	148, 181, 739, 1204, 1660
BspFNI	CGCG	1 cut(s)	332
BspLI	GGNNCC	3 cut(s)	149, 249, 1635
BspMI	ACCTGC	1 cut(s)	412
BspPI	GGATC	4 cut(s)	242, 255, 392, 1742
BspQI	GCTCTTC	1 cut(s)	891
BspT104I	TTCGAA	1 cut(s)	859
BspTI	CTTAAG	1 cut(s)	1130
BsrBI	CCGCTC	2 cut(s)	153, 354
BsrDI	GCAATG	3 cut(s)	969, 1648, 1681
BsrI	ACTGG	3 cut(s)	130, 807, 1719
BssECI	CCNNGG	9 cut(s)	111, 260, 266, 330, 434, 609, 963, 1091, 1863
BssMI	GATC	6 cut(s)	247, 397, 1225, 1735, 1741, 1747
BssNI	GRCGYC	1 cut(s)	93
BssSI	CACGAG	1 cut(s)	1182
BssT1I	CCWWGG	5 cut(s)	111, 434, 609, 963, 1863
Bst2BI	CACGAG	1 cut(s)	1182
Bst2UI	CCWGG	2 cut(s)	1092, 1638
Bst4CI	ACNGT	3 cut(s)	469, 689, 1031
Bst6I	CTCTTC	8 cut(s)	302, 362, 506, 534, 696, 756, 891, 1145
BstACI	GRCGYC	1 cut(s)	93
BstAFI	CTTAAG	1 cut(s)	1130
BstAPI	GCANNNNNTGC	2 cut(s)	427, 1063
BstBAI	YACGTR	1 cut(s)	1298
BstBI	TTCGAA	1 cut(s)	859
BstC8I	GCNNGC	3 cut(s)	231, 1068, 1278
BstDSI	CCRYGG	2 cut(s)	266, 330
BstF5I	GGATG	8 cut(s)	385, 391, 565, 595, 925, 991, 1160, 1615
BstFNI	CGCG	1 cut(s)	332
BstH2I	RGCGCY	1 cut(s)	1863
BstHHI	GCGC	1 cut(s)	1862
BstKTI	GATC	6 cut(s)	250, 400, 1228, 1738, 1744, 1750
BstMAI	GTCTC	5 cut(s)	1092, 1131, 1208, 1307, 1931
BstMBI	GATC	6 cut(s)	247, 397, 1225, 1735, 1741, 1747
BstNI	CCWGG	2 cut(s)	1092, 1638
BstNSI	RCATGY	2 cut(s)	1061, 1483
BstSCI	CCNGG	3 cut(s)	57, 1090, 1636
BstUI	CGCG	1 cut(s)	332
BstV1I	GCAGC	4 cut(s)	313, 442, 1375, 1586
BstX2I	RGATCY	1 cut(s)	247
BstYI	RGATCY	1 cut(s)	247
BsuRI	GGCC	3 cut(s)	176, 265, 608
BtgI	CCRYGG	2 cut(s)	266, 330
BtrI	CACGTC	1 cut(s)	40
BtsCI	GGATG	8 cut(s)	385, 391, 565, 595, 925, 991, 1160, 1615
BtsIMutI	CAGTG	4 cut(s)	465, 694, 1209, 1712
BveI	ACCTGC	1 cut(s)	412
Cac8I	GCNNGC	3 cut(s)	231, 1068, 1278
CaiI	CAGNNNCTG	1 cut(s)	1097
CfoI	GCGC	1 cut(s)	1862
Cfr13I	GGNCC	1 cut(s)	960
Cfr42I	CCGCGG	1 cut(s)	333
CseI	GACGC	2 cut(s)	7, 101
Csp6I	GTAC	3 cut(s)	782, 1295, 1594
CviAII	CATG	5 cut(s)	103, 1058, 1188, 1424, 1480
CviQI	GTAC	3 cut(s)	782, 1295, 1594
DpnI	GATC	6 cut(s)	249, 399, 1227, 1737, 1743, 1749
DpnII	GATC	6 cut(s)	247, 397, 1225, 1735, 1741, 1747
DraI	TTTAAA	1 cut(s)	1582
DraIII	CACNNNGTG	1 cut(s)	604
EaeI	YGGCCR	1 cut(s)	606
Eam1104I	CTCTTC	8 cut(s)	302, 362, 506, 534, 696, 756, 891, 1145
EarI	CTCTTC	8 cut(s)	302, 362, 506, 534, 696, 756, 891, 1145
EciI	GGCGGA	1 cut(s)	350
Ecl136II	GAGCTC	1 cut(s)	1568
Eco130I	CCWWGG	5 cut(s)	111, 434, 609, 963, 1863
Eco24I	GRGCYC	2 cut(s)	1570, 1636
Eco47I	GGWCC	1 cut(s)	960
Eco53kI	GAGCTC	1 cut(s)	1568
Eco57I	CTGAAG	1 cut(s)	428
Eco88I	CYCGRG	2 cut(s)	251, 1569
EcoICRI	GAGCTC	1 cut(s)	1568
EcoRII	CCWGG	2 cut(s)	1090, 1636
EcoT14I	CCWWGG	5 cut(s)	111, 434, 609, 963, 1863
EcoT38I	GRGCYC	2 cut(s)	1570, 1636
ErhI	CCWWGG	5 cut(s)	111, 434, 609, 963, 1863
Esp3I	CGTCTC	2 cut(s)	1092, 1208
FaeI	CATG	5 cut(s)	106, 1061, 1191, 1427, 1483
FalI	AAGNNNNNCTT	4 cut(s)	918, 950, 1862, 1894
FatI	CATG	5 cut(s)	102, 1057, 1187, 1423, 1479
FauI	CCCGC	1 cut(s)	1281
FauNDI	CATATG	1 cut(s)	1450
FbaI	TGATCA	1 cut(s)	1225
FblI	GTMKAC	2 cut(s)	42, 274
Fnu4HI	GCNGC	7 cut(s)	127, 327, 330, 333, 431, 1389, 1575
FokI	GGATG	8 cut(s)	392, 398, 572, 602, 932, 978, 1147, 1622
FriOI	GRGCYC	2 cut(s)	1570, 1636
Fsp4HI	GCNGC	7 cut(s)	127, 327, 330, 333, 431, 1389, 1575
FspBI	CTAG	4 cut(s)	435, 843, 1170, 1472
GlaI	GCGC	1 cut(s)	1861
GluI	GCNGC	7 cut(s)	127, 327, 330, 333, 431, 1389, 1575
GsaI	CCCAGC	1 cut(s)	1395
GsuI	CTGGAG	3 cut(s)	1074, 1584, 1713
HaeII	RGCGCY	1 cut(s)	1863
HaeIII	GGCC	3 cut(s)	176, 265, 608
HapII	CCGG	4 cut(s)	58, 214, 349, 1984
HgaI	GACGC	2 cut(s)	7, 101
HhaI	GCGC	1 cut(s)	1862
Hin1I	GRCGYC	1 cut(s)	93
Hin1II	CATG	5 cut(s)	106, 1061, 1191, 1427, 1483
Hin6I	GCGC	1 cut(s)	1860
HinP1I	GCGC	1 cut(s)	1860
HincII	GTYRAC	2 cut(s)	43, 275
HindII	GTYRAC	2 cut(s)	43, 275
HindIII	AAGCTT	1 cut(s)	1116
HpaII	CCGG	4 cut(s)	58, 214, 349, 1984
HphI	GGTGA	6 cut(s)	436, 731, 1261, 1415, 1879, 1981
Hpy166II	GTNNAC	4 cut(s)	43, 275, 1469, 1964
Hpy8I	GTNNAC	4 cut(s)	43, 275, 1469, 1964
Hpy99I	CGWCG	4 cut(s)	10, 44, 47, 556
HpyCH4III	ACNGT	3 cut(s)	469, 689, 1031
HpyCH4IV	ACGT	2 cut(s)	39, 1297
HpyCH4V	TGCA	8 cut(s)	421, 430, 788, 923, 1057, 1328, 1956, 2011
HpySE526I	ACGT	2 cut(s)	39, 1297
Hsp92I	GRCGYC	1 cut(s)	93
Hsp92II	CATG	5 cut(s)	106, 1061, 1191, 1427, 1483
HspAI	GCGC	1 cut(s)	1860
Ksp22I	TGATCA	1 cut(s)	1225
KspI	CCGCGG	1 cut(s)	333
Kzo9I	GATC	6 cut(s)	247, 397, 1225, 1735, 1741, 1747
LguI	GCTCTTC	1 cut(s)	891
LmnI	GCTCC	5 cut(s)	60, 61, 351, 1565, 1639
Lsp1109I	GCAGC	4 cut(s)	313, 442, 1375, 1586
LweI	GCATC	5 cut(s)	417, 721, 910, 1000, 1169
MaeI	CTAG	4 cut(s)	435, 843, 1170, 1472
MaeII	ACGT	2 cut(s)	39, 1297
MaeIII	GTNAC	3 cut(s)	85, 683, 1764
MalI	GATC	6 cut(s)	249, 399, 1227, 1737, 1743, 1749
MbiI	CCGCTC	2 cut(s)	153, 354
MboI	GATC	6 cut(s)	247, 397, 1225, 1735, 1741, 1747
MflI	RGATCY	1 cut(s)	247
MhlI	GDGCHC	2 cut(s)	1570, 1636
MlsI	TGGCCA	1 cut(s)	608
MluNI	TGGCCA	1 cut(s)	608
MlyI	GAGTC	4 cut(s)	280, 1772, 1922, 1989
MmeI	TCCRAC	3 cut(s)	648, 873, 1547
Mox20I	TGGCCA	1 cut(s)	608
MscI	TGGCCA	1 cut(s)	608
MseI	TTAA	4 cut(s)	753, 1131, 1581, 2025
MslI	CAYNNNNRTG	1 cut(s)	1186
Msp20I	TGGCCA	1 cut(s)	608
MspA1I	CMGCKG	2 cut(s)	332, 1667
MspCI	CTTAAG	1 cut(s)	1130
MspI	CCGG	4 cut(s)	58, 214, 349, 1984
MspR9I	CCNGG	3 cut(s)	59, 1092, 1638
Mva1269I	GAATGC	1 cut(s)	1687
MvaI	CCWGG	2 cut(s)	1092, 1638
MvnI	CGCG	1 cut(s)	332
NciI	CCSGG	1 cut(s)	59
NdeI	CATATG	1 cut(s)	1450
NdeII	GATC	6 cut(s)	247, 397, 1225, 1735, 1741, 1747
NlaIII	CATG	5 cut(s)	106, 1061, 1191, 1427, 1483
NlaIV	GGNNCC	3 cut(s)	149, 249, 1635
NmuCI	GTSAC	3 cut(s)	85, 683, 1764
NspI	RCATGY	2 cut(s)	1061, 1483
NspV	TTCGAA	1 cut(s)	859
PaeR7I	CTCGAG	1 cut(s)	1569
PaqCI	CACCTGC	1 cut(s)	412
PciI	ACATGT	1 cut(s)	1479
PciSI	GCTCTTC	1 cut(s)	891
PctI	GAATGC	1 cut(s)	1687
PfeI	GAWTC	8 cut(s)	256, 593, 671, 955, 998, 1103, 1370, 1894
PfoI	TCCNGGA	1 cut(s)	57
PkrI	GCNGC	7 cut(s)	128, 328, 331, 334, 432, 1390, 1576
PleI	GAGTC	4 cut(s)	279, 1771, 1922, 1988
PpsI	GAGTC	4 cut(s)	279, 1771, 1922, 1988
Ppu21I	YACGTR	1 cut(s)	1298
PscI	ACATGT	1 cut(s)	1479
PshBI	ATTAAT	1 cut(s)	2025
Psp124BI	GAGCTC	1 cut(s)	1570
Psp6I	CCWGG	2 cut(s)	1090, 1636
PspFI	CCCAGC	1 cut(s)	1391
PspGI	CCWGG	2 cut(s)	1090, 1636
PspN4I	GGNNCC	3 cut(s)	149, 249, 1635
PspPI	GGNCC	1 cut(s)	960
PspXI	VCTCGAGB	1 cut(s)	1569
PstNI	CAGNNNCTG	1 cut(s)	1097
PsuI	RGATCY	1 cut(s)	247
PvuII	CAGCTG	1 cut(s)	1667
RsaI	GTAC	3 cut(s)	783, 1296, 1595
RsaNI	GTAC	3 cut(s)	782, 1295, 1594
RseI	CAYNNNNRTG	1 cut(s)	1186
SacI	GAGCTC	1 cut(s)	1570
SacII	CCGCGG	1 cut(s)	333
SalI	GTCGAC	2 cut(s)	41, 273
SapI	GCTCTTC	1 cut(s)	891
SaqAI	TTAA	4 cut(s)	753, 1131, 1581, 2025
SatI	GCNGC	7 cut(s)	127, 327, 330, 333, 431, 1389, 1575
Sau3AI	GATC	6 cut(s)	247, 397, 1225, 1735, 1741, 1747
Sau96I	GGNCC	1 cut(s)	960
ScaI	AGTACT	1 cut(s)	783
SchI	GAGTC	4 cut(s)	280, 1772, 1922, 1989
ScrFI	CCNGG	3 cut(s)	59, 1092, 1638
SduI	GDGCHC	2 cut(s)	1570, 1636
SfaNI	GCATC	5 cut(s)	417, 721, 910, 1000, 1169
Sfr274I	CTCGAG	1 cut(s)	1569
Sfr303I	CCGCGG	1 cut(s)	333
SfuI	TTCGAA	1 cut(s)	859
SgrBI	CCGCGG	1 cut(s)	333
SgrDI	CGTCGACG	1 cut(s)	41
SinI	GGWCC	1 cut(s)	960
SlaI	CTCGAG	1 cut(s)	1569
SmiMI	CAYNNNNRTG	1 cut(s)	1186
SmlI	CTYRAG	3 cut(s)	1130, 1305, 1569
SmoI	CTYRAG	3 cut(s)	1130, 1305, 1569
SpeI	ACTAGT	1 cut(s)	842
SsiI	CCGC	7 cut(s)	127, 151, 330, 332, 335, 354, 1274
SspI	AATATT	1 cut(s)	1854
SspMI	CTAG	4 cut(s)	435, 843, 1170, 1472
SstI	GAGCTC	1 cut(s)	1570
StyD4I	CCNGG	3 cut(s)	57, 1090, 1636
StyI	CCWWGG	5 cut(s)	111, 434, 609, 963, 1863
TaaI	ACNGT	3 cut(s)	469, 689, 1031
TaiI	ACGT	2 cut(s)	42, 1300
TaqI	TCGA	7 cut(s)	8, 42, 274, 446, 458, 859, 1570
TaqII	GACCGA	1 cut(s)	948
TatI	WGTACW	1 cut(s)	781
TauI	GCSGC	3 cut(s)	129, 332, 335
TfiI	GAWTC	8 cut(s)	256, 593, 671, 955, 998, 1103, 1370, 1894
Tru1I	TTAA	4 cut(s)	753, 1131, 1581, 2025
Tru9I	TTAA	4 cut(s)	753, 1131, 1581, 2025
TscAI	CASTG	4 cut(s)	472, 694, 1216, 1719
TseFI	GTSAC	3 cut(s)	85, 683, 1764
TseI	GCWGC	4 cut(s)	326, 430, 1388, 1574
Tsp45I	GTSAC	3 cut(s)	85, 683, 1764
TspDTI	ATGAA	8 cut(s)	130, 552, 771, 843, 920, 968, 1424, 1692
TspGWI	ACGGA	1 cut(s)	104
TspRI	CASTG	4 cut(s)	472, 694, 1216, 1719
Vha464I	CTTAAG	1 cut(s)	1130
VpaK11BI	GGWCC	1 cut(s)	960
VspI	ATTAAT	1 cut(s)	2025
XapI	RAATTY	7 cut(s)	25, 862, 911, 1381, 1490, 1786, 1922
XceI	RCATGY	2 cut(s)	1061, 1483
XcmI	CCANNNNNNNNNTGG	1 cut(s)	616
XhoI	CTCGAG	1 cut(s)	1569
XmaJI	CCTAGG	1 cut(s)	434
XmiI	GTMKAC	2 cut(s)	42, 274
XspI	CTAG	4 cut(s)	435, 843, 1170, 1472
ZrmI	AGTACT	1 cut(s)	783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.