Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0010903

Physical Location & Seq

Genomic Coordinates Reverse (-)

33441673 .. 33448220

Gene Structure 6548 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1238300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

ATGCGGACGAAGGAGGGGAAGAGCCGGCAGTTCGCGTTCATTGGGTTCCGGACGGAGAGGGAAGCTCAGGAGGCCATGAAATACTACGACAGGTCGTTTTTAGATACTTGTAGGATTAGCTGTGAGATTGCGAGGAAGGTTGGGGATCCGGAGATTCCGCGGCCGTGGAGCCGGCATTCGAAGAAGAAGGATGGGGGAGGGGGTGGAGGCGAGGAGAAGAGCAAGAAGAAGGAGGAGCGCGGTGGTGGAGTGAAAAACCGGAGTCTTGAGGTGAAAGATGAGAGTGGTGATGTTAAGCTTCAGGAGTTTTTGGAGGTGATGCAGCCGAGGGCTAAGTCGAAATTGTGGGCGAACGATGCAGTGGCGGCTCCTGTAGCTGAGAAAATTGGGAAAAGCAAGAAGGAAAGCGTGGAGAAATCAGGAGCTGAGAACATTGGAAAAACCAAGAAGGATAGTGAGGAGAAATCAGTTCCGGCGGCTATGGAGGAGGTAGAGAAAGGTGTTAAGAAGAATGATAAACGCAATGTAGCAAAGGACGACGTTGTTTCGGATATGGATTACTTCAAAAGCAGAGTGAAGACTGAATGGTCAGATTCCGAAAGCAGTGGCTCAGAGGATAATGATGATGATGGTGATGAGGAGGAGGAGGAGGAGAAAGAGTCTCGAAAAGTCAATGCAAAGGAGCAAATTAGAGTTCACGAAGAAAAGGATGGAGAGAAGGGGCCTTCTGAGGATGCTAATGGCCAAGTAATTGACGAGAGCAATCTGTCATCCACTTCGAAAGATGAGAATGAAGAAGCTTTCGAAAGTGGTCGTCTTTTTGTTCGTAATCTGCCATTTACAGCAACCGAGGAGGAGCTGGAAGAGGCTTTTAGCAAATTTGGAGATGCACAGGTCCATCTTGTTATTGATAAAGAGACGAATCGTTCCAAGGGATTCGCATATGTTCTTTACAAGCTTCCAGAATGTGCAGAAAGGGCATTAGAAGCATTAGATGGTTCAATTTTCCAAGGAAGATTGTTGCATGTTATGCCAGCAAGGCAAAAGAATCCAACTGAGAAGCTAGGGGCTGATGATTCAGCAAGCCAAGCTTCAAAATCTCTTAAGAAACAAAGGGAGGATAAGAAGAAAGCATCTGAAGCTAGTGGCGATACAAGAGCATGGAACAGTTTGTTTATGCACCCTGATACGGTTGTTGAGAACATAGCTCGCAAGTATGGTGTAAGCAAGGGTGATTTGCTTGACCGAGAAGCTGATGATCTTGCTGTACGGATTGCTTTGGGAGAAACTCAAGTGATTGCAGAGACCAAAAAGTCTCTCACAAATGCTGGTATCAATGTGGAATCTTTAGAGAATTTTGCTTCTGGGAAAACAGATGGTGTTAAAAGAAGCAACCATGTTATACTGGTGAAGAACTTGCCATATGGTTCTACTGATGGTGAACTGGCGAAGATGTTTGGGAAATTTGGGAATTTGGAAAAAGTTGTTCTCCCGCAGACGAAGACATTGGCCTTGGTTGTTTTTCTTGAACCTGCTGATGCTCGAGCAGCTTTTAAGGGTTTAGCATACAAGCGCTACAAGGATGGTCCTTTATATTTGGAGTGGGCTCCTGGCAATGTTCTTAGTCCAAGTTCAACAACAGAGAGCATTGAAAAGAACAATGCTGTTGTTGGTGAGCATGATGTCAAAAGGGTTATGTTAGAGCAGTATGTGGGAGGAATAGCAGATGTGGATGCTGATCCAGATAGAGTTGAGTCACGATCTCTATATGTCAAGAATCTGAGCTTTAGGACATCAGACGAGAGTTTGAAAAAGCATTTTAGTGGACAAGTGAAGGAGGGAAAACTATTAAGTGTTAAGGTGAAGAAACACTTGAAGAATGGGAAGAATGTTTCAATGGGTTTTGGTTTTCTGGAGTTCGAATCTGTGGAGACAGCCACAAATGTTTGCCGGGATTTACAGGGAACTATTTTGGACGGGCATGCTCTTATTTTGCAACTTTGTCATGCCAAGAAAGATGAGGTGCCTAAAAAGGTTGACAAGGATAAAAGCTCGACAAAACTACTTGTGAAAAATGTAGCTTTTGAGGCCACAGAGAAAGAACTGAGACAGCTATTTAGTCCATTTGGCCAGATTAAAAGTTTACGGTTGCCAATGAAGTTTGGACAGCATAGAGGATTTGCATTTGTAGAGTTCATCACAAAGCAAGAGGCCGAAAATGCTCTTAAAGCGCTTTCGAGCACCCATTTGTACGGTCGCCATCTGGTTCTGGAGAGAGCAAAGGAAGGTGAGAGCTTGGAAGAACTACGAGCGCGAACAGCTGCTCAGTTTGCAGACGAGCAGAATGGGGTTTCCAGGAAGAGGAAGCAAGTGGCCACCTCGGACGAAGGCAAATTCAAATTTGAGAGAACTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000028 GO:0000447 GO:0000460 GO:0000462 GO:0000466 GO:0000469 GO:0000472 GO:0000478 GO:0000479 GO:0000480 GO:0000966 GO:0000967 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0019843 GO:0022607 GO:0022613 GO:0022618 GO:0030490 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032991 GO:0034462 GO:0034470 GO:0034471 GO:0034622 GO:0034641 GO:0034660 GO:0042134 GO:0042254 GO:0042255 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0065003 GO:0070013 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1

Protein Analysis

806

Amino Acids

89.76

Weight (kDa)

6.5

Isoelectric Point (pI)

38.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	273 - 341	6.8e-19	RNA recognition motif
RRM_1	PF00076	468 - 527	7.4e-08	RNA recognition motif
RRM_1	PF00076	589 - 663	4.8e-11	RNA recognition motif
RRM_1	PF00076	688 - 755	1.1e-18	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010903)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19610 AT5G05720 AT5G08695
fragaria_vesca	FvH4_3g11840
malus_domestica	MD05G1258600.v1.1 MD10G1238300.v1.1
prunus_persica	Prupe.4G106000_v2.0.a1
pyrus_communis	pycom10g19930
rosa_chinensis	RchiOBHm_Chr5g0019271
rosa_laevigata	RLG00000032433
rosa_multiflora	Rmu_sc0004608.1_g000004
rosa_roxburghii	Rroxscaffold_1G00058730 Rroxscaffold_1G00074200
rosa_rugosa	Rorug05G0049100 Rorug05G0049200
rosa_samantha	Rh5AG140200 Rh5BG139200 Rh5CG150600 Rh5DG139800
rosa_wichuraiana	Rw5G012470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	586, 1312
Acc36I	ACCTGC	1 cut(s)	1540
AccB1I	GGYRCC	1 cut(s)	2023
AccII	CGCG	4 cut(s)	35, 160, 240, 2314
AccIII	TCCGGA	2 cut(s)	48, 148
AciI	CCGC	7 cut(s)	4, 158, 160, 240, 365, 476, 1493
AclWI	GGATC	3 cut(s)	140, 153, 1733
AcoI	YGGCCR	4 cut(s)	161, 742, 2128, 2373
AcsI	RAATTY	6 cut(s)	878, 1354, 1463, 1471, 2393, 2399
AcuI	CTGAAG	2 cut(s)	284, 1158
AfaI	GTAC	2 cut(s)	1269, 2252
AfeI	AGCGCT	2 cut(s)	1574, 2232
AfiI	CCNNNNNNNGG	2 cut(s)	1189, 2361
AflII	CTTAAG	1 cut(s)	1103
AjnI	CCWGG	2 cut(s)	1609, 2354
Alw21I	GWGCWC	1 cut(s)	2243
Alw26I	GTCTC	6 cut(s)	666, 911, 1298, 1320, 1925, 2101
AlwI	GGATC	3 cut(s)	140, 153, 1733
AlwNI	CAGNNNCTG	1 cut(s)	425
Ama87I	CYCGRG	1 cut(s)	1542
Aor13HI	TCCGGA	2 cut(s)	48, 148
Aor51HI	AGCGCT	2 cut(s)	1574, 2232
AoxI	GGCC	9 cut(s)	72, 161, 722, 742, 1509, 2088, 2128, 2211, 2373
ApeKI	GCWGC	3 cut(s)	322, 1547, 2321
ApoI	RAATTY	6 cut(s)	878, 1354, 1463, 1471, 2393, 2399
AspLEI	GCGC	4 cut(s)	240, 1575, 2233, 2314
AspS9I	GGNCC	3 cut(s)	722, 895, 1586
AsuC2I	CCSGG	1 cut(s)	1952
AsuII	TTCGAA	4 cut(s)	179, 779, 804, 1920
AvaI	CYCGRG	1 cut(s)	1542
AvaII	GGWCC	2 cut(s)	895, 1586
BaeI	ACNNNNGTAYC	2 cut(s)	1179, 1212
BalI	TGGCCA	3 cut(s)	744, 2130, 2375
BamHI	GGATCC	1 cut(s)	145
BanI	GGYRCC	1 cut(s)	2023
BanII	GRGCYC	1 cut(s)	1609
BbsI	GAAGAC	2 cut(s)	584, 1508
Bbv12I	GWGCWC	1 cut(s)	2243
BbvI	GCAGC	3 cut(s)	334, 1559, 2308
BccI	CCATC	9 cut(s)	185, 623, 704, 906, 989, 1370, 1430, 1577, 2268
BceAI	ACGGC	1 cut(s)	148
BciT130I	CCWGG	2 cut(s)	1611, 2356
BcnI	CCSGG	1 cut(s)	1952
BcoDI	GTCTC	6 cut(s)	666, 911, 1298, 1320, 1925, 2101
BfaI	CTAG	2 cut(s)	1064, 1143
BfmI	CTRYAG	1 cut(s)	372
BfoI	RGCGCY	2 cut(s)	1576, 2234
BfrI	CTTAAG	1 cut(s)	1103
BfuAI	ACCTGC	1 cut(s)	1540
BglI	GCCNNNNNGGC	1 cut(s)	1039
BisI	GCNGC	6 cut(s)	161, 323, 366, 477, 1548, 2322
BlsI	GCNGC	6 cut(s)	162, 324, 367, 478, 1549, 2323
Bme1390I	CCNGG	3 cut(s)	1611, 1952, 2356
Bme18I	GGWCC	2 cut(s)	895, 1586
BmeT110I	CYCGRG	1 cut(s)	1542
BmgT120I	GGNCC	3 cut(s)	722, 895, 1586
BmiI	GGNNCC	7 cut(s)	47, 147, 170, 369, 723, 1608, 2025
BmrFI	CCNGG	3 cut(s)	1611, 1952, 2356
BmsI	GCATC	7 cut(s)	309, 346, 724, 877, 1142, 1528, 1723
BpiI	GAAGAC	2 cut(s)	584, 1508
BplI	GAGNNNNNCTC	2 cut(s)	49, 81
BpmI	CTGGAG	2 cut(s)	1934, 2291
Bpu10I	CCTNAGC	1 cut(s)	66
Bpu14I	TTCGAA	4 cut(s)	179, 779, 804, 1920
BpuEI	CTTGAG	2 cut(s)	287, 1275
BpuMI	CCSGG	1 cut(s)	1952
BsaBI	GATNNNNATC	1 cut(s)	1737
BsaI	GGTCTC	1 cut(s)	1298
BsaJI	CCNNGG	8 cut(s)	158, 164, 326, 849, 930, 1009, 1512, 2379
BsaWI	WCCGGW	3 cut(s)	48, 148, 258
BsaXI	ACNNNNNCTCC	2 cut(s)	644, 674
Bsc4I	CCNNNNNNNGG	2 cut(s)	1189, 2361
Bse118I	RCCGGY	2 cut(s)	24, 171
Bse1I	ACTGG	2 cut(s)	1410, 1449
Bse3DI	GCAATG	2 cut(s)	529, 1621
Bse8I	GATNNNNATC	1 cut(s)	1737
BseAI	TCCGGA	2 cut(s)	48, 148
BseBI	CCWGG	2 cut(s)	1611, 2356
BseDI	CCNNGG	8 cut(s)	158, 164, 326, 849, 930, 1009, 1512, 2379
BseGI	GGATG	6 cut(s)	196, 715, 739, 770, 1588, 1738
BseJI	GATNNNNATC	1 cut(s)	1737
BseLI	CCNNNNNNNGG	2 cut(s)	1189, 2361
BseMI	GCAATG	2 cut(s)	529, 1621
BseMII	CTCAG	9 cut(s)	80, 369, 417, 624, 720, 1047, 1772, 2096, 2339
BseNI	ACTGG	2 cut(s)	1410, 1449
BseX3I	CGGCCG	1 cut(s)	161
BseXI	GCAGC	3 cut(s)	334, 1559, 2308
BsgI	GTGCAG	1 cut(s)	990
Bsh1236I	CGCG	4 cut(s)	35, 160, 240, 2314
Bsh1285I	CGRYCG	2 cut(s)	164, 2257
BshFI	GGCC	9 cut(s)	74, 163, 724, 744, 1511, 2090, 2130, 2213, 2375
BshNI	GGYRCC	1 cut(s)	2023
BsiEI	CGRYCG	2 cut(s)	164, 2257
BsiHKAI	GWGCWC	1 cut(s)	2243
BsiHKCI	CYCGRG	1 cut(s)	1542
BsiSI	CCGG	7 cut(s)	25, 49, 149, 172, 259, 473, 1951
BslI	CCNNNNNNNGG	2 cut(s)	1189, 2361
BsmAI	GTCTC	6 cut(s)	666, 911, 1298, 1320, 1925, 2101
BsmBI	CGTCTC	1 cut(s)	911
BsmI	GAATGC	1 cut(s)	175
BsnI	GGCC	9 cut(s)	74, 163, 724, 744, 1511, 2090, 2130, 2213, 2375
Bso31I	GGTCTC	1 cut(s)	1298
BsoBI	CYCGRG	1 cut(s)	1542
Bsp119I	TTCGAA	4 cut(s)	179, 779, 804, 1920
Bsp1286I	GDGCHC	2 cut(s)	1609, 2243
Bsp13I	TCCGGA	2 cut(s)	48, 148
Bsp143I	GATC	4 cut(s)	145, 1258, 1738, 1760
BspACI	CCGC	7 cut(s)	4, 158, 160, 240, 365, 476, 1493
BspANI	GGCC	9 cut(s)	74, 163, 724, 744, 1511, 2090, 2130, 2213, 2375
BspCNI	CTCAG	9 cut(s)	79, 370, 418, 623, 721, 1048, 1773, 2097, 2338
BspEI	TCCGGA	2 cut(s)	48, 148
BspFNI	CGCG	4 cut(s)	35, 160, 240, 2314
BspLI	GGNNCC	7 cut(s)	47, 147, 170, 369, 723, 1608, 2025
BspMI	ACCTGC	1 cut(s)	1540
BspPI	GGATC	3 cut(s)	140, 153, 1733
BspQI	GCTCTTC	2 cut(s)	14, 212
BspT104I	TTCGAA	4 cut(s)	179, 779, 804, 1920
BspT107I	GGYRCC	1 cut(s)	2023
BspTI	CTTAAG	1 cut(s)	1103
BspTNI	GGTCTC	1 cut(s)	1298
BsrDI	GCAATG	2 cut(s)	529, 1621
BsrFI	RCCGGY	2 cut(s)	24, 171
BsrI	ACTGG	2 cut(s)	1410, 1449
BssAI	RCCGGY	2 cut(s)	24, 171
BssECI	CCNNGG	8 cut(s)	158, 164, 326, 849, 930, 1009, 1512, 2379
BssMI	GATC	4 cut(s)	145, 1258, 1738, 1760
BssT1I	CCWWGG	3 cut(s)	930, 1009, 1512
Bst2UI	CCWGG	2 cut(s)	1611, 2356
Bst4CI	ACNGT	4 cut(s)	1169, 1192, 2148, 2255
Bst6I	CTCTTC	4 cut(s)	14, 212, 858, 2354
BstAFI	CTTAAG	1 cut(s)	1103
BstAPI	GCANNNNNTGC	1 cut(s)	1030
BstBI	TTCGAA	4 cut(s)	179, 779, 804, 1920
BstC8I	GCNNGC	6 cut(s)	26, 173, 1035, 1084, 1210, 1983
BstDSI	CCRYGG	2 cut(s)	158, 164
BstF5I	GGATG	6 cut(s)	196, 715, 739, 770, 1588, 1738
BstFNI	CGCG	4 cut(s)	35, 160, 240, 2314
BstH2I	RGCGCY	2 cut(s)	1576, 2234
BstHHI	GCGC	4 cut(s)	240, 1575, 2233, 2314
BstKTI	GATC	4 cut(s)	148, 1261, 1741, 1763
BstMAI	GTCTC	6 cut(s)	666, 911, 1298, 1320, 1925, 2101
BstMBI	GATC	4 cut(s)	145, 1258, 1738, 1760
BstMCI	CGRYCG	2 cut(s)	164, 2257
BstNI	CCWGG	2 cut(s)	1611, 2356
BstNSI	RCATGY	2 cut(s)	1028, 1985
BstSCI	CCNGG	3 cut(s)	1609, 1950, 2354
BstSFI	CTRYAG	1 cut(s)	372
BstUI	CGCG	4 cut(s)	35, 160, 240, 2314
BstV1I	GCAGC	3 cut(s)	334, 1559, 2308
BstV2I	GAAGAC	2 cut(s)	584, 1508
BstX2I	RGATCY	1 cut(s)	145
BstYI	RGATCY	1 cut(s)	145
BstZI	CGGCCG	1 cut(s)	161
BsuRI	GGCC	9 cut(s)	74, 163, 724, 744, 1511, 2090, 2130, 2213, 2375
BtgI	CCRYGG	2 cut(s)	158, 164
BtsCI	GGATG	6 cut(s)	196, 715, 739, 770, 1588, 1738
BtsI	GCAGTG	2 cut(s)	366, 610
BtsIMutI	CAGTG	2 cut(s)	366, 610
BveI	ACCTGC	1 cut(s)	1540
Cac8I	GCNNGC	6 cut(s)	26, 173, 1035, 1084, 1210, 1983
CaiI	CAGNNNCTG	1 cut(s)	425
CfoI	GCGC	4 cut(s)	240, 1575, 2233, 2314
Cfr10I	RCCGGY	2 cut(s)	24, 171
Cfr13I	GGNCC	3 cut(s)	722, 895, 1586
Cfr42I	CCGCGG	1 cut(s)	161
Csp6I	GTAC	2 cut(s)	1268, 2251
CviAII	CATG	7 cut(s)	76, 1025, 1161, 1397, 1679, 1982, 2006
CviQI	GTAC	2 cut(s)	1268, 2251
DpnI	GATC	4 cut(s)	147, 1260, 1740, 1762
DpnII	GATC	4 cut(s)	145, 1258, 1738, 1760
DrdI	GACNNNNNNGTC	2 cut(s)	586, 1312
DseDI	GACNNNNNNGTC	2 cut(s)	586, 1312
EaeI	YGGCCR	4 cut(s)	161, 742, 2128, 2373
EagI	CGGCCG	1 cut(s)	161
Eam1104I	CTCTTC	4 cut(s)	14, 212, 858, 2354
EarI	CTCTTC	4 cut(s)	14, 212, 858, 2354
EclXI	CGGCCG	1 cut(s)	161
Eco130I	CCWWGG	3 cut(s)	930, 1009, 1512
Eco24I	GRGCYC	1 cut(s)	1609
Eco31I	GGTCTC	1 cut(s)	1298
Eco47I	GGWCC	2 cut(s)	895, 1586
Eco47III	AGCGCT	2 cut(s)	1574, 2232
Eco52I	CGGCCG	1 cut(s)	161
Eco57I	CTGAAG	2 cut(s)	284, 1158
Eco88I	CYCGRG	1 cut(s)	1542
EcoO109I	RGGNCCY	1 cut(s)	722
EcoRII	CCWGG	2 cut(s)	1609, 2354
EcoT14I	CCWWGG	3 cut(s)	930, 1009, 1512
EcoT38I	GRGCYC	1 cut(s)	1609
ErhI	CCWWGG	3 cut(s)	930, 1009, 1512
Esp3I	CGTCTC	1 cut(s)	911
FaeI	CATG	7 cut(s)	79, 1028, 1164, 1400, 1682, 1985, 2009
FalI	AAGNNNNNCTT	4 cut(s)	1075, 1107, 1856, 1888
FatI	CATG	7 cut(s)	75, 1024, 1160, 1396, 1678, 1981, 2005
FauI	CCCGC	1 cut(s)	1500
FauNDI	CATATG	2 cut(s)	943, 1423
Fnu4HI	GCNGC	6 cut(s)	161, 323, 366, 477, 1548, 2322
FokI	GGATG	6 cut(s)	203, 722, 746, 757, 1595, 1745
FriOI	GRGCYC	1 cut(s)	1609
Fsp4HI	GCNGC	6 cut(s)	161, 323, 366, 477, 1548, 2322
FspBI	CTAG	2 cut(s)	1064, 1143
GlaI	GCGC	4 cut(s)	239, 1574, 2232, 2313
GluI	GCNGC	6 cut(s)	161, 323, 366, 477, 1548, 2322
GsuI	CTGGAG	2 cut(s)	1934, 2291
HaeII	RGCGCY	2 cut(s)	1576, 2234
HaeIII	GGCC	9 cut(s)	74, 163, 724, 744, 1511, 2090, 2130, 2213, 2375
HapII	CCGG	7 cut(s)	25, 49, 149, 172, 259, 473, 1951
HhaI	GCGC	4 cut(s)	240, 1575, 2233, 2314
Hin1II	CATG	7 cut(s)	79, 1028, 1164, 1400, 1682, 1985, 2009
Hin6I	GCGC	4 cut(s)	238, 1573, 2231, 2312
HinP1I	GCGC	4 cut(s)	238, 1573, 2231, 2312
HincII	GTYRAC	1 cut(s)	2038
HindII	GTYRAC	1 cut(s)	2038
HindIII	AAGCTT	4 cut(s)	296, 798, 956, 1089
HpaII	CCGG	7 cut(s)	25, 49, 149, 172, 259, 473, 1951
Hpy166II	GTNNAC	5 cut(s)	697, 1442, 1826, 2038, 2144
Hpy188I	TCNGA	9 cut(s)	550, 592, 598, 613, 730, 1138, 1782, 1798, 2383
Hpy8I	GTNNAC	5 cut(s)	697, 1442, 1826, 2038, 2144
Hpy99I	CGWCG	1 cut(s)	542
HpyCH4III	ACNGT	4 cut(s)	1169, 1192, 2148, 2255
HpyCH4IV	ACGT	1 cut(s)	540
HpySE526I	ACGT	1 cut(s)	540
Hsp92II	CATG	7 cut(s)	79, 1028, 1164, 1400, 1682, 1985, 2009
HspAI	GCGC	4 cut(s)	238, 1573, 2231, 2312
Kpn2I	TCCGGA	2 cut(s)	48, 148
KroI	GCCGGC	2 cut(s)	24, 171
KroNI	GCCGGC	2 cut(s)	26, 173
KspI	CCGCGG	1 cut(s)	161
Kzo9I	GATC	4 cut(s)	145, 1258, 1738, 1760
LguI	GCTCTTC	2 cut(s)	14, 212
LmnI	GCTCC	7 cut(s)	168, 235, 373, 422, 682, 856, 1612
Lsp1109I	GCAGC	3 cut(s)	334, 1559, 2308
LweI	GCATC	7 cut(s)	309, 346, 724, 877, 1142, 1528, 1723
MaeI	CTAG	2 cut(s)	1064, 1143
MaeII	ACGT	1 cut(s)	540
MaeIII	GTNAC	1 cut(s)	1755
MalI	GATC	4 cut(s)	147, 1260, 1740, 1762
MboI	GATC	4 cut(s)	145, 1258, 1738, 1760
MflI	RGATCY	1 cut(s)	145
MhlI	GDGCHC	2 cut(s)	1609, 2243
MlsI	TGGCCA	3 cut(s)	744, 2130, 2375
MluNI	TGGCCA	3 cut(s)	744, 2130, 2375
MlyI	GAGTC	3 cut(s)	271, 668, 1763
MmeI	TCCRAC	1 cut(s)	1076
Mox20I	TGGCCA	3 cut(s)	744, 2130, 2375
MroI	TCCGGA	2 cut(s)	48, 148
MroNI	GCCGGC	2 cut(s)	24, 171
MscI	TGGCCA	3 cut(s)	744, 2130, 2375
MseI	TTAA	9 cut(s)	294, 504, 1104, 1383, 1554, 1850, 1857, 2136, 2226
MslI	CAYNNNNRTG	1 cut(s)	1821
Msp20I	TGGCCA	3 cut(s)	744, 2130, 2375
MspA1I	CMGCKG	2 cut(s)	160, 2321
MspCI	CTTAAG	1 cut(s)	1103
MspI	CCGG	7 cut(s)	25, 49, 149, 172, 259, 473, 1951
MspR9I	CCNGG	3 cut(s)	1611, 1952, 2356
Mva1269I	GAATGC	1 cut(s)	175
MvaI	CCWGG	2 cut(s)	1611, 2356
MvnI	CGCG	4 cut(s)	35, 160, 240, 2314
NaeI	GCCGGC	2 cut(s)	26, 173
NciI	CCSGG	1 cut(s)	1952
NdeI	CATATG	2 cut(s)	943, 1423
NdeII	GATC	4 cut(s)	145, 1258, 1738, 1760
NgoMIV	GCCGGC	2 cut(s)	24, 171
NlaIII	CATG	7 cut(s)	79, 1028, 1164, 1400, 1682, 1985, 2009
NlaIV	GGNNCC	7 cut(s)	47, 147, 170, 369, 723, 1608, 2025
NmeAIII	GCCGAG	1 cut(s)	351
NmuCI	GTSAC	1 cut(s)	1755
NspI	RCATGY	2 cut(s)	1028, 1985
NspV	TTCGAA	4 cut(s)	179, 779, 804, 1920
PaeI	GCATGC	1 cut(s)	1985
PaeR7I	CTCGAG	1 cut(s)	1542
PciSI	GCTCTTC	2 cut(s)	14, 212
PctI	GAATGC	1 cut(s)	175
PdiI	GCCGGC	2 cut(s)	26, 173
PfeI	GAWTC	9 cut(s)	154, 593, 922, 936, 1048, 1076, 1343, 1777, 1922
PfoI	TCCNGGA	1 cut(s)	2354
PkrI	GCNGC	6 cut(s)	162, 324, 367, 478, 1549, 2323
PleI	GAGTC	3 cut(s)	270, 667, 1762
PpsI	GAGTC	3 cut(s)	270, 667, 1762
Psp6I	CCWGG	2 cut(s)	1609, 2354
PspGI	CCWGG	2 cut(s)	1609, 2354
PspN4I	GGNNCC	7 cut(s)	47, 147, 170, 369, 723, 1608, 2025
PspPI	GGNCC	3 cut(s)	722, 895, 1586
PspXI	VCTCGAGB	1 cut(s)	1542
PstNI	CAGNNNCTG	1 cut(s)	425
PsuI	RGATCY	1 cut(s)	145
PvuII	CAGCTG	1 cut(s)	2321
RsaI	GTAC	2 cut(s)	1269, 2252
RsaNI	GTAC	2 cut(s)	1268, 2251
RseI	CAYNNNNRTG	1 cut(s)	1821
SacII	CCGCGG	1 cut(s)	161
SapI	GCTCTTC	2 cut(s)	14, 212
SaqAI	TTAA	9 cut(s)	294, 504, 1104, 1383, 1554, 1850, 1857, 2136, 2226
SatI	GCNGC	6 cut(s)	161, 323, 366, 477, 1548, 2322
Sau3AI	GATC	4 cut(s)	145, 1258, 1738, 1760
Sau96I	GGNCC	3 cut(s)	722, 895, 1586
SchI	GAGTC	3 cut(s)	271, 668, 1763
ScrFI	CCNGG	3 cut(s)	1611, 1952, 2356
SduI	GDGCHC	2 cut(s)	1609, 2243
SfaNI	GCATC	7 cut(s)	309, 346, 724, 877, 1142, 1528, 1723
SfcI	CTRYAG	1 cut(s)	372
Sfr274I	CTCGAG	1 cut(s)	1542
Sfr303I	CCGCGG	1 cut(s)	161
SfuI	TTCGAA	4 cut(s)	179, 779, 804, 1920
SgrBI	CCGCGG	1 cut(s)	161
SinI	GGWCC	2 cut(s)	895, 1586
SlaI	CTCGAG	1 cut(s)	1542
SmiMI	CAYNNNNRTG	1 cut(s)	1821
SmlI	CTYRAG	4 cut(s)	266, 1103, 1290, 1542
SmoI	CTYRAG	4 cut(s)	266, 1103, 1290, 1542
SphI	GCATGC	1 cut(s)	1985
SsiI	CCGC	7 cut(s)	4, 158, 160, 240, 365, 476, 1493
SspMI	CTAG	2 cut(s)	1064, 1143
StyD4I	CCNGG	3 cut(s)	1609, 1950, 2354
StyI	CCWWGG	3 cut(s)	930, 1009, 1512
TaaI	ACNGT	4 cut(s)	1169, 1192, 2148, 2255
TaiI	ACGT	1 cut(s)	543
TaqI	TCGA	9 cut(s)	179, 338, 664, 779, 804, 1543, 1920, 2054, 2237
TaqII	GACCGA	1 cut(s)	1260
TauI	GCSGC	3 cut(s)	163, 368, 479
TfiI	GAWTC	9 cut(s)	154, 593, 922, 936, 1048, 1076, 1343, 1777, 1922
Tru1I	TTAA	9 cut(s)	294, 504, 1104, 1383, 1554, 1850, 1857, 2136, 2226
Tru9I	TTAA	9 cut(s)	294, 504, 1104, 1383, 1554, 1850, 1857, 2136, 2226
TscAI	CASTG	2 cut(s)	366, 610
TseFI	GTSAC	1 cut(s)	1755
TseI	GCWGC	3 cut(s)	322, 1547, 2321
Tsp45I	GTSAC	1 cut(s)	1755
TspDTI	ATGAA	5 cut(s)	28, 92, 807, 2171, 2185
TspGWI	ACGGA	2 cut(s)	68, 1285
TspRI	CASTG	2 cut(s)	366, 610
Vha464I	CTTAAG	1 cut(s)	1103
VpaK11BI	GGWCC	2 cut(s)	895, 1586
XapI	RAATTY	6 cut(s)	878, 1354, 1463, 1471, 2393, 2399
XceI	RCATGY	2 cut(s)	1028, 1985
XhoI	CTCGAG	1 cut(s)	1542
XspI	CTAG	2 cut(s)	1064, 1143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.