Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010903

Physical Location & Seq

Genomic Coordinates Forward (+)

13684449 .. 13690565

Gene Structure 6117 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ29940

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

ATGCGAACCAAGGAAGGCAAGAGCCGCCAGTTCGCTTTCATAGGGTTCCGCTCCGAGCTTCAAGCTCAGGAGGCCATCAAATACTTCAATAAAACTTTTATTGATACTTACCGGATTAGTTGCGAGCTTGCTCGGAAAGTTGGGGATCCCGAGATTCCGAGGCCGTGGAGTCGACATACTAAGGAGAAAGAGAAGGAGAAGGAGAAGAGAGAGAGTGAAGGTGCTGCCGCGGCGGAGGCGAAAAGCCGGAGCGGAGTGGGAGGGAAGAGGAGTGAGGATGAGGATGAGATTGATGATCCTAAGCTTAAGGAGTTTTTGCAGGTGATGCAGCCTAGGGCTAAGTCGAAATTGTGGTCGAATGACACTGTGATTGCTAATGTTGAGGGGAAAATTGGGAAAGGAGAGAAGAAGAGAGAGCAGAGAAAGAAGGGGAATGAAGAGAGTTTGGCGACGATGGATGTGGAGGTAGAGGAGGAAGTGGAGAAGGATGATTCACACAATGTGGCCAAGGATAATGTGGTTTCGGATATGGATTACTTCAAGAGTAGAGTGAAGAAGGATTGGTCGGATTCTGAAAGTAGTGACAGTGATGATGAGGAAGAGGAGGAGGAGGAAGGTGAAGAATTAGATGCTAAGGAAGAAGCTGAGGTTAATGAAGAAGAGGCAGGAGAGGAACAAGTACTTGCACAGGGTAATCCTTCGTCCAGTTTGAAAGATGAGAAAGATGAAATGCTTGATACTAGTCGGCTTTTTGTTCGAAATTTGCCATTTACAGCAACAGAGGACGAGTTGGAAGAGCATTTTTGCAAATTCGGGGATGCACAAGTTCATCTTGTTATTGATAAAGAAATGAATCGGTCCAAGGGAATTGCTTATGTTCTTTACTCGCATCCAGAATCGGCACAAAGGGCATTAGAAGAATTAGACGGTTCAATTTTTCAAGGAAGATTGTTGCATGTTATGCCAGCAAAACAAAAAAACCCGTCTCCAGGGGCTGATGATTCGGCAAACCAAGCTTCAAAGTCTCTTAAGCAACAAAGGGAGGAGAAGAGGAAAGCATCCGAAGCTAGTGGAGATACACGAGCATGGAATAGTTTGTTTATACGCACTGAGACAGCTGTTGATCACTTAGCTCGGAAGTTTGGGGTGAGCAAGAGTGATTTTCTTGACCCGCAAGCTGATGATGTCGCTGTACGTGTTGCTCAAGCAGAGACACAAGTGATTGCGCAGACAAAAAAGGCTCTTACAAATGCTGGTGTAAATGTAGAATCTTTAGAGAATTTTGCTGCTGGGAAAGGTGGTGATATGAAAAGAAGCAACCATGTTATACTTGTGAAAAACTTGCCATATGGTTCTTCTGATAGTGAACTAGGAAACATGTTTGGAAAATTTGGGAGTTTTGAAAAAATCATTATGCCTCCGACAAAGACATTGGCGTTGGTTGTCTTTTTTGAACCTTCTGGAGCTCGAGCAGCTTTTAAAGGTTTGGCGTACAAGAAATACAAGGATGTTCCTCTATATTTGGAATGGGCTCCTGGCAATGTTCTTAGTCCAAGTTCAACAGCTGAGAGCAATGAAAAGAAGCATTCTGCTGTTGCTGAACATAAGCCACTGGTGGAAGGAACTCCAGATGATCTTGATCTTGATCCTGATAGAGTTGAGTCACGAACTCTATATGTCAAGAATTTGAACTTCAAGACATCTGACGAGAGCTTGAAGAAGCATTTTGAACAAGTGAAGGAGGGAAGAATATTGAGCGCCAAGGTGAAGAAACATTTGAAAAAAGGGAAGAATCTTTCAATGGGATTTGGTTTTGTAGAATTTGACTCTGTGGAGACAACCACAGAGGTTTGCAAGAGTTTACAGGGAACAATTTTGGATGGCCACCAACTTATTTTGCAACATTGTCATGCCAAGCAAGATGACGTGCCAAAAAAAGTTGTGAAGGACAAAAGTTCAACAAAAATACTTGTAAAAAATGTAGCCTTTGAGGCTACAAAGAAAGAGCTTCGACAGTTGTTTAGTACATATGGCGAGATTAAAAGCTTGCGGTTACCAAACAGATTGGGACAGCATAGAGGCTTTGCATTTGTGGAGTTTGCCACAAAGCAAGAGGCAGAAAATGCCATCCAAGCGCTTGCAAGCACACATCTGTACGGTCGCCATCTGGTTCTGGAGAGAGCAAAGGAAGGTGAGACCTTGGAAGATTTAAGAGCTCGAATAGCTGCTCAGTTCACAGATGACCAAAATACTATTTCCAGGAAAAGGAAGGCTGTCGCAACCTTGGATGAAGATAACATGAAATTTGATATGACTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000028 GO:0000447 GO:0000460 GO:0000462 GO:0000466 GO:0000469 GO:0000472 GO:0000478 GO:0000479 GO:0000480 GO:0000966 GO:0000967 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0019843 GO:0022607 GO:0022613 GO:0022618 GO:0030490 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032991 GO:0034462 GO:0034470 GO:0034471 GO:0034622 GO:0034641 GO:0034660 GO:0042134 GO:0042254 GO:0042255 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0065003 GO:0070013 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1

Protein Analysis

773

Amino Acids

86.89

Weight (kDa)

5.64

Isoelectric Point (pI)

40.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	250 - 318	1.3e-16	RNA recognition motif
RRM_1	PF00076	443 - 503	1.7e-07	RNA recognition motif
RRM_1	PF00076	558 - 631	7.4e-13	RNA recognition motif
RRM_1	PF00076	656 - 723	1.3e-18	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010903)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19610 AT5G05720 AT5G08695
fragaria_vesca	FvH4_3g11840
malus_domestica	MD05G1258600.v1.1 MD10G1238300.v1.1
prunus_persica	Prupe.4G106000_v2.0.a1
pyrus_communis	pycom10g19930
rosa_chinensis	RchiOBHm_Chr5g0019271
rosa_laevigata	RLG00000032433
rosa_multiflora	Rmu_sc0004608.1_g000004
rosa_roxburghii	Rroxscaffold_1G00058730 Rroxscaffold_1G00074200
rosa_rugosa	Rorug05G0049100 Rorug05G0049200
rosa_samantha	Rh5AG140200 Rh5BG139200 Rh5CG150600 Rh5DG139800
rosa_wichuraiana	Rw5G012470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	310
Acc16I	TGCGCA	1 cut(s)	1227
Acc36I	ACCTGC	1 cut(s)	310
AccBSI	CCGCTC	2 cut(s)	51, 252
AccI	GTMKAC	1 cut(s)	172
AccII	CGCG	1 cut(s)	230
AciI	CCGC	8 cut(s)	25, 49, 228, 230, 233, 252, 1172, 2050
AclWI	GGATC	4 cut(s)	140, 153, 290, 1640
AcoI	YGGCCR	2 cut(s)	504, 1882
AcsI	RAATTY	7 cut(s)	760, 809, 1279, 1388, 1684, 1820, 2303
AdeI	CACNNNGTG	1 cut(s)	502
AfaI	GTAC	5 cut(s)	681, 1194, 1493, 2026, 2156
AfeI	AGCGCT	1 cut(s)	2136
AfiI	CCNNNNNNNGG	2 cut(s)	989, 2265
AflII	CTTAAG	2 cut(s)	305, 1028
AflIII	ACRYGT	2 cut(s)	1195, 1377
AhlI	ACTAGT	1 cut(s)	740
AjiI	CACGTC	1 cut(s)	1927
AjnI	CCWGG	3 cut(s)	988, 1534, 2258
Alw21I	GWGCWC	2 cut(s)	1468, 2218
Alw26I	GTCTC	6 cut(s)	990, 1029, 1106, 1205, 1829, 2189
AlwI	GGATC	4 cut(s)	140, 153, 290, 1640
AlwNI	CAGNNNCTG	1 cut(s)	995
Ama87I	CYCGRG	2 cut(s)	149, 1467
Aor51HI	AGCGCT	1 cut(s)	2136
AoxI	GGCC	4 cut(s)	72, 161, 504, 1882
ApeKI	GCWGC	5 cut(s)	224, 328, 1286, 1472, 2225
ApoI	RAATTY	7 cut(s)	760, 809, 1279, 1388, 1684, 1820, 2303
ArsI	GACNNNNNNTTYG	2 cut(s)	338, 370
AspA2I	CCTAGG	1 cut(s)	332
AspLEI	GCGC	3 cut(s)	1228, 1760, 2137
AspS9I	GGNCC	1 cut(s)	858
AsuHPI	GGTGA	6 cut(s)	334, 629, 1159, 1313, 1777, 2204
AsuII	TTCGAA	1 cut(s)	757
AvaI	CYCGRG	2 cut(s)	149, 1467
AvaII	GGWCC	1 cut(s)	858
AvrII	CCTAGG	1 cut(s)	332
BalI	TGGCCA	2 cut(s)	506, 1884
BamHI	GGATCC	1 cut(s)	145
BanII	GRGCYC	3 cut(s)	1468, 1534, 2218
BauI	CACGAG	1 cut(s)	1080
Bbv12I	GWGCWC	2 cut(s)	1468, 2218
BbvCI	CCTCAGC	1 cut(s)	645
BbvI	GCAGC	5 cut(s)	211, 340, 1273, 1484, 2212
BccI	CCATC	5 cut(s)	83, 448, 1874, 2135, 2172
BceAI	ACGGC	1 cut(s)	148
BciT130I	CCWGG	3 cut(s)	990, 1536, 2260
BclI	TGATCA	1 cut(s)	1123
BcoDI	GTCTC	6 cut(s)	990, 1029, 1106, 1205, 1829, 2189
BcuI	ACTAGT	1 cut(s)	740
BfaI	CTAG	4 cut(s)	333, 741, 1068, 1370
BfoI	RGCGCY	2 cut(s)	1761, 2138
BfrI	CTTAAG	2 cut(s)	305, 1028
BfuAI	ACCTGC	1 cut(s)	310
BglI	GCCNNNNNGGC	1 cut(s)	1991
BisI	GCNGC	8 cut(s)	25, 225, 228, 231, 329, 1287, 1473, 2226
BlnI	CCTAGG	1 cut(s)	332
BlsI	GCNGC	8 cut(s)	26, 226, 229, 232, 330, 1288, 1474, 2227
BmcAI	AGTACT	1 cut(s)	681
Bme1390I	CCNGG	3 cut(s)	990, 1536, 2260
Bme18I	GGWCC	1 cut(s)	858
BmeT110I	CYCGRG	2 cut(s)	149, 1467
BmgBI	CACGTC	1 cut(s)	1927
BmgT120I	GGNCC	1 cut(s)	858
BmiI	GGNNCC	3 cut(s)	47, 147, 1533
BmrFI	CCNGG	3 cut(s)	990, 1536, 2260
BmsI	GCATC	5 cut(s)	315, 619, 808, 898, 1067
BpmI	CTGGAG	4 cut(s)	972, 1482, 1611, 2195
Bpu10I	CCTNAGC	4 cut(s)	66, 300, 633, 645
Bpu14I	TTCGAA	1 cut(s)	757
BpuEI	CTTGAG	1 cut(s)	1188
BsaAI	YACGTR	1 cut(s)	1196
BsaBI	GATNNNNATC	2 cut(s)	1638, 1644
BsaI	GGTCTC	1 cut(s)	2189
BsaWI	WCCGGW	1 cut(s)	111
Bsc4I	CCNNNNNNNGG	2 cut(s)	989, 2265
Bse1I	ACTGG	3 cut(s)	28, 705, 1617
Bse3DI	GCAATG	2 cut(s)	1546, 1579
Bse8I	GATNNNNATC	2 cut(s)	1638, 1644
BseBI	CCWGG	3 cut(s)	990, 1536, 2260
BseJI	GATNNNNATC	2 cut(s)	1638, 1644
BseLI	CCNNNNNNNGG	2 cut(s)	989, 2265
BseMI	GCAATG	2 cut(s)	1546, 1579
BseMII	CTCAG	5 cut(s)	80, 636, 1101, 1557, 2243
BseNI	ACTGG	3 cut(s)	28, 705, 1617
BseRI	GAGGAG	6 cut(s)	283, 485, 617, 620, 623, 1058
BseXI	GCAGC	5 cut(s)	211, 340, 1273, 1484, 2212
BseYI	CCCAGC	1 cut(s)	1289
Bsh1236I	CGCG	1 cut(s)	230
Bsh1285I	CGRYCG	1 cut(s)	2161
BshFI	GGCC	4 cut(s)	74, 163, 506, 1884
BsiEI	CGRYCG	1 cut(s)	2161
BsiHKAI	GWGCWC	2 cut(s)	1468, 2218
BsiHKCI	CYCGRG	2 cut(s)	149, 1467
BsiSI	CCGG	2 cut(s)	112, 247
BslFI	GGGAC	1 cut(s)	2082
BslI	CCNNNNNNNGG	2 cut(s)	989, 2265
BsmAI	GTCTC	6 cut(s)	990, 1029, 1106, 1205, 1829, 2189
BsmBI	CGTCTC	1 cut(s)	990
BsmFI	GGGAC	1 cut(s)	2082
BsmI	GAATGC	1 cut(s)	1585
BsnI	GGCC	4 cut(s)	74, 163, 506, 1884
Bso31I	GGTCTC	1 cut(s)	2189
BsoBI	CYCGRG	2 cut(s)	149, 1467
Bsp119I	TTCGAA	1 cut(s)	757
Bsp1286I	GDGCHC	3 cut(s)	1468, 1534, 2218
Bsp143I	GATC	6 cut(s)	145, 295, 1123, 1633, 1639, 1645
BspACI	CCGC	8 cut(s)	25, 49, 228, 230, 233, 252, 1172, 2050
BspANI	GGCC	4 cut(s)	74, 163, 506, 1884
BspCNI	CTCAG	5 cut(s)	79, 637, 1102, 1558, 2242
BspFNI	CGCG	1 cut(s)	230
BspLI	GGNNCC	3 cut(s)	47, 147, 1533
BspMI	ACCTGC	1 cut(s)	310
BspPI	GGATC	4 cut(s)	140, 153, 290, 1640
BspQI	GCTCTTC	1 cut(s)	789
BspT104I	TTCGAA	1 cut(s)	757
BspTI	CTTAAG	2 cut(s)	305, 1028
BspTNI	GGTCTC	1 cut(s)	2189
BsrBI	CCGCTC	2 cut(s)	51, 252
BsrDI	GCAATG	2 cut(s)	1546, 1579
BsrI	ACTGG	3 cut(s)	28, 705, 1617
BssMI	GATC	6 cut(s)	145, 295, 1123, 1633, 1639, 1645
BssSI	CACGAG	1 cut(s)	1080
BssT1I	CCWWGG	7 cut(s)	9, 332, 507, 861, 1761, 2199, 2283
Bst2BI	CACGAG	1 cut(s)	1080
Bst2UI	CCWGG	3 cut(s)	990, 1536, 2260
Bst4CI	ACNGT	5 cut(s)	367, 587, 929, 2016, 2159
Bst6I	CTCTTC	8 cut(s)	200, 260, 404, 432, 594, 654, 789, 1043
BstAFI	CTTAAG	2 cut(s)	305, 1028
BstAPI	GCANNNNNTGC	3 cut(s)	325, 961, 2123
BstBAI	YACGTR	1 cut(s)	1196
BstBI	TTCGAA	1 cut(s)	757
BstC8I	GCNNGC	7 cut(s)	125, 129, 966, 1176, 2048, 2139, 2143
BstDSI	CCRYGG	2 cut(s)	164, 228
BstEII	GGTNACC	1 cut(s)	2052
BstFNI	CGCG	1 cut(s)	230
BstH2I	RGCGCY	2 cut(s)	1761, 2138
BstHHI	GCGC	3 cut(s)	1228, 1760, 2137
BstKTI	GATC	6 cut(s)	148, 298, 1126, 1636, 1642, 1648
BstMAI	GTCTC	6 cut(s)	990, 1029, 1106, 1205, 1829, 2189
BstMBI	GATC	6 cut(s)	145, 295, 1123, 1633, 1639, 1645
BstMCI	CGRYCG	1 cut(s)	2161
BstNI	CCWGG	3 cut(s)	990, 1536, 2260
BstNSI	RCATGY	2 cut(s)	959, 1381
BstPI	GGTNACC	1 cut(s)	2052
BstSCI	CCNGG	3 cut(s)	988, 1534, 2258
BstUI	CGCG	1 cut(s)	230
BstV1I	GCAGC	5 cut(s)	211, 340, 1273, 1484, 2212
BstX2I	RGATCY	1 cut(s)	145
BstYI	RGATCY	1 cut(s)	145
BsuRI	GGCC	4 cut(s)	74, 163, 506, 1884
BtgI	CCRYGG	2 cut(s)	164, 228
BtrI	CACGTC	1 cut(s)	1927
BtsIMutI	CAGTG	4 cut(s)	363, 592, 1107, 1610
BveI	ACCTGC	1 cut(s)	310
Cac8I	GCNNGC	7 cut(s)	125, 129, 966, 1176, 2048, 2139, 2143
CaiI	CAGNNNCTG	1 cut(s)	995
CfoI	GCGC	3 cut(s)	1228, 1760, 2137
Cfr13I	GGNCC	1 cut(s)	858
Cfr42I	CCGCGG	1 cut(s)	231
Csp6I	GTAC	5 cut(s)	680, 1193, 1492, 2025, 2155
CviAII	CATG	6 cut(s)	956, 1086, 1322, 1378, 1910, 2299
CviQI	GTAC	5 cut(s)	680, 1193, 1492, 2025, 2155
DpnI	GATC	6 cut(s)	147, 297, 1125, 1635, 1641, 1647
DpnII	GATC	6 cut(s)	145, 295, 1123, 1633, 1639, 1645
DraI	TTTAAA	1 cut(s)	1480
DraIII	CACNNNGTG	1 cut(s)	502
EaeI	YGGCCR	2 cut(s)	504, 1882
Eam1104I	CTCTTC	8 cut(s)	200, 260, 404, 432, 594, 654, 789, 1043
EarI	CTCTTC	8 cut(s)	200, 260, 404, 432, 594, 654, 789, 1043
EciI	GGCGGA	1 cut(s)	248
Ecl136II	GAGCTC	2 cut(s)	1466, 2216
Eco130I	CCWWGG	7 cut(s)	9, 332, 507, 861, 1761, 2199, 2283
Eco24I	GRGCYC	3 cut(s)	1468, 1534, 2218
Eco31I	GGTCTC	1 cut(s)	2189
Eco47I	GGWCC	1 cut(s)	858
Eco47III	AGCGCT	1 cut(s)	2136
Eco53kI	GAGCTC	2 cut(s)	1466, 2216
Eco88I	CYCGRG	2 cut(s)	149, 1467
Eco91I	GGTNACC	1 cut(s)	2052
EcoICRI	GAGCTC	2 cut(s)	1466, 2216
EcoO65I	GGTNACC	1 cut(s)	2052
EcoRII	CCWGG	3 cut(s)	988, 1534, 2258
EcoT14I	CCWWGG	7 cut(s)	9, 332, 507, 861, 1761, 2199, 2283
EcoT38I	GRGCYC	3 cut(s)	1468, 1534, 2218
ErhI	CCWWGG	7 cut(s)	9, 332, 507, 861, 1761, 2199, 2283
Esp3I	CGTCTC	1 cut(s)	990
FaeI	CATG	6 cut(s)	959, 1089, 1325, 1381, 1913, 2302
FalI	AAGNNNNNCTT	2 cut(s)	816, 848
FaqI	GGGAC	1 cut(s)	2082
FatI	CATG	6 cut(s)	955, 1085, 1321, 1377, 1909, 2298
FauI	CCCGC	1 cut(s)	1179
FauNDI	CATATG	2 cut(s)	1348, 2029
FbaI	TGATCA	1 cut(s)	1123
FblI	GTMKAC	1 cut(s)	172
Fnu4HI	GCNGC	8 cut(s)	25, 225, 228, 231, 329, 1287, 1473, 2226
FriOI	GRGCYC	3 cut(s)	1468, 1534, 2218
Fsp4HI	GCNGC	8 cut(s)	25, 225, 228, 231, 329, 1287, 1473, 2226
FspBI	CTAG	4 cut(s)	333, 741, 1068, 1370
FspI	TGCGCA	1 cut(s)	1227
GlaI	GCGC	3 cut(s)	1227, 1759, 2136
GluI	GCNGC	8 cut(s)	25, 225, 228, 231, 329, 1287, 1473, 2226
GsaI	CCCAGC	1 cut(s)	1293
GsuI	CTGGAG	4 cut(s)	972, 1482, 1611, 2195
HaeII	RGCGCY	2 cut(s)	1761, 2138
HaeIII	GGCC	4 cut(s)	74, 163, 506, 1884
HapII	CCGG	2 cut(s)	112, 247
HhaI	GCGC	3 cut(s)	1228, 1760, 2137
Hin1II	CATG	6 cut(s)	959, 1089, 1325, 1381, 1913, 2302
Hin6I	GCGC	3 cut(s)	1226, 1758, 2135
HinP1I	GCGC	3 cut(s)	1226, 1758, 2135
HincII	GTYRAC	1 cut(s)	173
HindII	GTYRAC	1 cut(s)	173
HindIII	AAGCTT	3 cut(s)	302, 1014, 2044
HpaII	CCGG	2 cut(s)	112, 247
HphI	GGTGA	6 cut(s)	334, 629, 1159, 1313, 1777, 2204
Hpy166II	GTNNAC	4 cut(s)	173, 1367, 1862, 2235
Hpy8I	GTNNAC	4 cut(s)	173, 1367, 1862, 2235
Hpy99I	CGWCG	1 cut(s)	454
HpyCH4III	ACNGT	5 cut(s)	367, 587, 929, 2016, 2159
HpyCH4IV	ACGT	2 cut(s)	1195, 1926
HpySE526I	ACGT	2 cut(s)	1195, 1926
Hsp92II	CATG	6 cut(s)	959, 1089, 1325, 1381, 1913, 2302
HspAI	GCGC	3 cut(s)	1226, 1758, 2135
Ksp22I	TGATCA	1 cut(s)	1123
KspI	CCGCGG	1 cut(s)	231
Kzo9I	GATC	6 cut(s)	145, 295, 1123, 1633, 1639, 1645
LguI	GCTCTTC	1 cut(s)	789
LmnI	GCTCC	4 cut(s)	56, 249, 1463, 1537
Lsp1109I	GCAGC	5 cut(s)	211, 340, 1273, 1484, 2212
LweI	GCATC	5 cut(s)	315, 619, 808, 898, 1067
MaeI	CTAG	4 cut(s)	333, 741, 1068, 1370
MaeII	ACGT	2 cut(s)	1195, 1926
MaeIII	GTNAC	3 cut(s)	581, 1662, 2052
MalI	GATC	6 cut(s)	147, 297, 1125, 1635, 1641, 1647
MbiI	CCGCTC	2 cut(s)	51, 252
MboI	GATC	6 cut(s)	145, 295, 1123, 1633, 1639, 1645
MflI	RGATCY	1 cut(s)	145
MhlI	GDGCHC	3 cut(s)	1468, 1534, 2218
MlsI	TGGCCA	2 cut(s)	506, 1884
MluNI	TGGCCA	2 cut(s)	506, 1884
MlyI	GAGTC	3 cut(s)	178, 1670, 1820
MmeI	TCCRAC	3 cut(s)	546, 771, 1445
Mox20I	TGGCCA	2 cut(s)	506, 1884
MscI	TGGCCA	2 cut(s)	506, 1884
MseI	TTAA	6 cut(s)	306, 651, 1029, 1479, 2040, 2210
MslI	CAYNNNNRTG	2 cut(s)	1084, 1908
Msp20I	TGGCCA	2 cut(s)	506, 1884
MspA1I	CMGCKG	3 cut(s)	230, 1118, 1565
MspCI	CTTAAG	2 cut(s)	305, 1028
MspI	CCGG	2 cut(s)	112, 247
MspR9I	CCNGG	3 cut(s)	990, 1536, 2260
Mva1269I	GAATGC	1 cut(s)	1585
MvaI	CCWGG	3 cut(s)	990, 1536, 2260
MvnI	CGCG	1 cut(s)	230
NdeI	CATATG	2 cut(s)	1348, 2029
NdeII	GATC	6 cut(s)	145, 295, 1123, 1633, 1639, 1645
NlaIII	CATG	6 cut(s)	959, 1089, 1325, 1381, 1913, 2302
NlaIV	GGNNCC	3 cut(s)	47, 147, 1533
NmuCI	GTSAC	2 cut(s)	581, 1662
NsbI	TGCGCA	1 cut(s)	1227
NspI	RCATGY	2 cut(s)	959, 1381
NspV	TTCGAA	1 cut(s)	757
PaeR7I	CTCGAG	1 cut(s)	1467
PaqCI	CACCTGC	1 cut(s)	310
PciI	ACATGT	1 cut(s)	1377
PciSI	GCTCTTC	1 cut(s)	789
PctI	GAATGC	1 cut(s)	1585
PfeI	GAWTC	8 cut(s)	154, 491, 569, 853, 896, 1001, 1268, 1792
PfoI	TCCNGGA	1 cut(s)	2258
PkrI	GCNGC	8 cut(s)	26, 226, 229, 232, 330, 1288, 1474, 2227
PleI	GAGTC	3 cut(s)	177, 1669, 1820
PpsI	GAGTC	3 cut(s)	177, 1669, 1820
Ppu21I	YACGTR	1 cut(s)	1196
PscI	ACATGT	1 cut(s)	1377
Psp124BI	GAGCTC	2 cut(s)	1468, 2218
Psp6I	CCWGG	3 cut(s)	988, 1534, 2258
PspEI	GGTNACC	1 cut(s)	2052
PspFI	CCCAGC	1 cut(s)	1289
PspGI	CCWGG	3 cut(s)	988, 1534, 2258
PspN4I	GGNNCC	3 cut(s)	47, 147, 1533
PspPI	GGNCC	1 cut(s)	858
PspXI	VCTCGAGB	1 cut(s)	1467
PstNI	CAGNNNCTG	1 cut(s)	995
PsuI	RGATCY	1 cut(s)	145
PvuII	CAGCTG	2 cut(s)	1118, 1565
RsaI	GTAC	5 cut(s)	681, 1194, 1493, 2026, 2156
RsaNI	GTAC	5 cut(s)	680, 1193, 1492, 2025, 2155
RseI	CAYNNNNRTG	2 cut(s)	1084, 1908
SacI	GAGCTC	2 cut(s)	1468, 2218
SacII	CCGCGG	1 cut(s)	231
SalI	GTCGAC	1 cut(s)	171
SapI	GCTCTTC	1 cut(s)	789
SaqAI	TTAA	6 cut(s)	306, 651, 1029, 1479, 2040, 2210
SatI	GCNGC	8 cut(s)	25, 225, 228, 231, 329, 1287, 1473, 2226
Sau3AI	GATC	6 cut(s)	145, 295, 1123, 1633, 1639, 1645
Sau96I	GGNCC	1 cut(s)	858
ScaI	AGTACT	1 cut(s)	681
SchI	GAGTC	3 cut(s)	178, 1670, 1820
ScrFI	CCNGG	3 cut(s)	990, 1536, 2260
SduI	GDGCHC	3 cut(s)	1468, 1534, 2218
SfaNI	GCATC	5 cut(s)	315, 619, 808, 898, 1067
Sfr274I	CTCGAG	1 cut(s)	1467
Sfr303I	CCGCGG	1 cut(s)	231
SfuI	TTCGAA	1 cut(s)	757
SgrBI	CCGCGG	1 cut(s)	231
SinI	GGWCC	1 cut(s)	858
SlaI	CTCGAG	1 cut(s)	1467
SmiMI	CAYNNNNRTG	2 cut(s)	1084, 1908
SmlI	CTYRAG	4 cut(s)	305, 1028, 1203, 1467
SmoI	CTYRAG	4 cut(s)	305, 1028, 1203, 1467
SpeI	ACTAGT	1 cut(s)	740
SsiI	CCGC	8 cut(s)	25, 49, 228, 230, 233, 252, 1172, 2050
SspI	AATATT	1 cut(s)	1752
SspMI	CTAG	4 cut(s)	333, 741, 1068, 1370
SstI	GAGCTC	2 cut(s)	1468, 2218
StyD4I	CCNGG	3 cut(s)	988, 1534, 2258
StyI	CCWWGG	7 cut(s)	9, 332, 507, 861, 1761, 2199, 2283
TaaI	ACNGT	5 cut(s)	367, 587, 929, 2016, 2159
TaiI	ACGT	2 cut(s)	1198, 1929
TaqI	TCGA	7 cut(s)	172, 344, 356, 757, 1468, 2011, 2218
TaqII	GACCGA	1 cut(s)	846
TatI	WGTACW	2 cut(s)	679, 2024
TauI	GCSGC	3 cut(s)	27, 230, 233
TfiI	GAWTC	8 cut(s)	154, 491, 569, 853, 896, 1001, 1268, 1792
Tru1I	TTAA	6 cut(s)	306, 651, 1029, 1479, 2040, 2210
Tru9I	TTAA	6 cut(s)	306, 651, 1029, 1479, 2040, 2210
TscAI	CASTG	4 cut(s)	370, 592, 1114, 1617
TseFI	GTSAC	2 cut(s)	581, 1662
TseI	GCWGC	5 cut(s)	224, 328, 1286, 1472, 2225
Tsp45I	GTSAC	2 cut(s)	581, 1662
TspRI	CASTG	4 cut(s)	370, 592, 1114, 1617
Vha464I	CTTAAG	2 cut(s)	305, 1028
VpaK11BI	GGWCC	1 cut(s)	858
XapI	RAATTY	7 cut(s)	760, 809, 1279, 1388, 1684, 1820, 2303
XceI	RCATGY	2 cut(s)	959, 1381
XcmI	CCANNNNNNNNNTGG	1 cut(s)	514
XhoI	CTCGAG	1 cut(s)	1467
XmaJI	CCTAGG	1 cut(s)	332
XmiI	GTMKAC	1 cut(s)	172
XspI	CTAG	4 cut(s)	333, 741, 1068, 1370
ZrmI	AGTACT	1 cut(s)	681

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.