Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0010903

Physical Location & Seq

Genomic Coordinates Forward (+)

4311279 .. 4313720

Gene Structure 2442 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0049200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

ATGGATAATCTATTATTTTGGAATGCTAGAGGTGCTGGGGGTGATGACTTTCGTTCTGCTATTTCAGATTTGGTCAAAATGAATAATGTCGATTTTCTTATTATATGTGAGCCAAGAGTTCAGTTTATAAAAGCGAAGAAGCACCTTCTTGGATTGGGTTTCAATGAATTTGAGATCAAGGAGGCTAATGGTTTTTCTGGTGGGATTTGGATGGTCTGGAATAACTCCAAGTTCAAAGTTGAGGTTATTGATTCTAACTCTCAATCCATAACTGTTAAAATTTCTTGGTGTGGGTTGAGGAGTTGGATGTTAACTGGAATTTATGCTAGTCCCTGTATTACTACGAGACAAGGTCTATGGCATTATTTAGCTCATATTCATACTGCATATCAGTTACCTTGGGTTGTAGTTGGCGATTGCAATGAACTTTTATCCTTCTCTGACAAAAATGGTGGGTCTTATATTGGAAAGTTTGGAGGCATGAAGACTTGGGTTCAGCAGGATGGTATGATTGATTTAGGCTACCATGGGGCAGATTATACTTGGTCAGGTGGCACAGTTAAAGAGAGATTGGATAGGGGCTTTTGTAACAGTGATTGGAGATTATTATTCCCTGAAGCTAAAGTGCAACATCTTGCTAAAATGAAGTCTGACCACTGCCCATTACTATTGAGGCTTCAAAATCAGTTTAGAAGCTATAGAGTTGATCCTCCCTTTCGATTTTATGCTATGTGGATGCAACACAGTCATTATAGTGAGTTTATTGCTAATACTTGGAATGAGACCACAGGTGAGTTCATGAGTAAAATTAAACATTTAGCAATGAATTTGGGAAAGTGGAACAGAGAAGTGTTTGGCAATATTTTCCATCAGAAAAAAAGATTGTTGGCTAGAATTTGTGGTATTCAGAAGCAAAGATGTACTAATGATAATCCCTTCTTGATTGACCTGGAGAAAAAGCTTATTCTGGAATATGAAGATATCAGAGATCGTGAGGCTCTTTTATGGAGACAAAAATCTAGAGAGAAGTGGGTGCAAGGTGGGGATAGGAATACAAAAATTTTCCACATTACCACAATGGTTAGAAGAAGAAAAAATAGAATTGATGGCTTATATGATCAGAATGGTTCCTGGTGTGCGGATCATGCTGCAATGAAACTGATTGCACAAAATTTCTTTCAAAAGCTCTTCACTTACGAGGAGGGTCCTGATCTTAGATTTCATATTCCTAATCTGTTTCCTGGCATCCCTTCTACTCTCTTGCTTGATCTGGGAAGCCCTATTACACCTGCTGAGATTAAAAATGCTTTATTTGCCATTGGTAGTCTTAAGGCCCCTGGGTTTGATGGATTCCCTTCTCTATTTTACCAGAAGCATTGGCATTTGTGTGGTGAGGAGATTATTCAACTTATTTCAAGAGCTTTTGCTGAGGGACATGTACCTCAGGGACTTAATCATACTTTAATCACTTTGGTACCCAAAATTCAGGGTCCGAAATACATGCACCTCTTTAGACCTATCAGCCTCTGCAGCACAATTTATAAAATCATCACAAAAATTATTGTCTCTAGAATTCGACCTTTTTTGCGACAATGGATTAGTCCTTTTCAAGTTAGTTTTGTGCTTGGCAGGCATATCTCGGATAACATTCTTATAACTCAAGAAATTCTTCATAAGTGCAGGTCTACAAGTGGAAAGAAGGGCATTATGGTGTGGAAAATTGATCTCTCTAAAGCTTATGATAAGCTGAACTGGAACTTTATTCAGCAGGTTTTGTATGAGCTTCAACTTCCTGATTCTTTAATCAATTTAATTATGCATTGCATCACTTCTGCTACTTTTCAAGTAATTGTTAATGGTGATCTATCTGATAAATTTGGTGCTGGTAGAGGTGTGAGACAAGGGGATCCCCTATCGCCTTATATCTTTGTTCTTTACATGGAAAAATTGTCTCATTTAATTCAAGCTGCAATTGATGTTGGACAATGGAAACCAGTTAAGTCCTCAAAGTCTGGCCCTTGTGTTTCACACTTATTCTTTGCCGATGACATCATCCTATTTGCTGAAGCTTCTACATCTCAAGCTACTGTTCTTAAGAAGTGCATGGATATTTTTTGTGGTTTATCGGGTCAATCAGTAAATTTTAATAAATCCAAGCTATATGTGTCTCCAAATGTCAGCAGAAGAATTGCTACTTCCATCAGTAGTATATGTGGCTCTCCTCTTACAAGTGACTTGGGCAAGTACTTGGGTATGCCTTTACTGCATTCTAGAATAACTAAAAGCAGGGGTGGGCACCCAAAACCGAAATCCCGGTCCCGTCCCGAAACCGTCCCGAAATCCGCCGAAACGGGACGGGATCAAAATTTAAAATTTACTATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000028 GO:0000447 GO:0000460 GO:0000462 GO:0000466 GO:0000469 GO:0000472 GO:0000478 GO:0000479 GO:0000480 GO:0000966 GO:0000967 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0019843 GO:0022607 GO:0022613 GO:0022618 GO:0030490 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032991 GO:0034462 GO:0034470 GO:0034471 GO:0034622 GO:0034641 GO:0034660 GO:0042134 GO:0042254 GO:0042255 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0065003 GO:0070013 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1

Protein Analysis

794

Amino Acids

90.59

Weight (kDa)

9.46

Isoelectric Point (pI)

41.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos	PF03372	6 - 219	1.1e-06	Endonuclease/Exonuclease/phosphatase family
RVT_1	PF00078	502 - 753	6.3e-31	Reverse transcriptase (RNA-dependent DNA polymerase)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010903)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19610 AT5G05720 AT5G08695
fragaria_vesca	FvH4_3g11840
malus_domestica	MD05G1258600.v1.1 MD10G1238300.v1.1
prunus_persica	Prupe.4G106000_v2.0.a1
pyrus_communis	pycom10g19930
rosa_chinensis	RchiOBHm_Chr5g0019271
rosa_laevigata	RLG00000032433
rosa_multiflora	Rmu_sc0004608.1_g000004
rosa_roxburghii	Rroxscaffold_1G00058730 Rroxscaffold_1G00074200
rosa_rugosa	Rorug05G0049100 Rorug05G0049200
rosa_samantha	Rh5AG140200 Rh5BG139200 Rh5CG150600 Rh5DG139800
rosa_wichuraiana	Rw5G012470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	128, 1542, 1655
AarI	CACCTGC	1 cut(s)	1297
Acc36I	ACCTGC	3 cut(s)	1297, 1671, 1759
Acc65I	GGTACC	1 cut(s)	1474
AccB1I	GGYRCC	2 cut(s)	1474, 2295
AccI	GTMKAC	1 cut(s)	1685
AciI	CCGC	2 cut(s)	1139, 2343
AclWI	GGATC	5 cut(s)	701, 1149, 1901, 1914, 2367
AcuI	CTGAAG	2 cut(s)	636, 2085
AfaI	GTAC	4 cut(s)	922, 1440, 1476, 2246
AflII	CTTAAG	2 cut(s)	1328, 2093
AflIII	ACRYGT	1 cut(s)	1435
AjnI	CCWGG	4 cut(s)	948, 1130, 1240, 1336
Alw26I	GTCTC	7 cut(s)	340, 776, 1003, 1570, 1891, 1956, 2172
AlwI	GGATC	5 cut(s)	701, 1149, 1901, 1914, 2367
AlwNI	CAGNNNCTG	1 cut(s)	1527
AoxI	GGCC	2 cut(s)	1332, 2014
ApeKI	GCWGC	3 cut(s)	1148, 1530, 1967
ArsI	GACNNNNNNTTYG	2 cut(s)	2300, 2332
Asp700I	GAANNNNTTC	1 cut(s)	1668
Asp718I	GGTACC	1 cut(s)	1474
AspS9I	GGNCC	5 cut(s)	1205, 1333, 1490, 2015, 2316
AsuC2I	CCSGG	1 cut(s)	2314
AsuHPI	GGTGA	4 cut(s)	53, 803, 1403, 1871
AvaII	GGWCC	3 cut(s)	1205, 1490, 2316
AxyI	CCTNAGG	1 cut(s)	1443
BaeGI	GKGCMC	1 cut(s)	2298
BaeI	ACNNNNGTAYC	2 cut(s)	1458, 1491
BamHI	GGATCC	1 cut(s)	1906
BanI	GGYRCC	2 cut(s)	1474, 2295
BarI	GAAGNNNNNNTAC	4 cut(s)	1267, 1299, 2176, 2208
BbsI	GAAGAC	1 cut(s)	491
BbvCI	CCTCAGC	1 cut(s)	1428
BbvI	GCAGC	3 cut(s)	1135, 1542, 1954
BccI	CCATC	6 cut(s)	205, 497, 876, 1100, 1340, 2207
BcgI	CGANNNNNNTGC	2 cut(s)	1483, 1517
BciT130I	CCWGG	4 cut(s)	950, 1132, 1242, 1338
BclI	TGATCA	1 cut(s)	1117
BcnI	CCSGG	1 cut(s)	2314
BcoDI	GTCTC	7 cut(s)	340, 776, 1003, 1570, 1891, 1956, 2172
BfaI	CTAG	6 cut(s)	27, 327, 891, 1020, 1569, 2271
BfmI	CTRYAG	2 cut(s)	697, 1528
BfrI	CTTAAG	2 cut(s)	1328, 2093
BfuAI	ACCTGC	3 cut(s)	1297, 1671, 1759
BisI	GCNGC	3 cut(s)	1149, 1531, 1968
BlsI	GCNGC	3 cut(s)	1150, 1532, 1969
BmcAI	AGTACT	1 cut(s)	2246
Bme1390I	CCNGG	5 cut(s)	950, 1132, 1242, 1338, 2314
Bme18I	GGWCC	3 cut(s)	1205, 1490, 2316
BmgT120I	GGNCC	5 cut(s)	1205, 1333, 1490, 2015, 2316
BmiI	GGNNCC	8 cut(s)	1129, 1206, 1335, 1476, 1491, 1908, 2297, 2318
BmrFI	CCNGG	5 cut(s)	950, 1132, 1242, 1338, 2314
BmsI	GCATC	3 cut(s)	726, 1254, 1833
BpiI	GAAGAC	1 cut(s)	491
BpmI	CTGGAG	1 cut(s)	971
Bpu10I	CCTNAGC	1 cut(s)	1428
BpuEI	CTTGAG	2 cut(s)	1644, 2064
BpuMI	CCSGG	1 cut(s)	2314
BsaI	GGTCTC	1 cut(s)	776
BsaJI	CCNNGG	4 cut(s)	398, 526, 1336, 1337
Bse1I	ACTGG	3 cut(s)	319, 1757, 1994
Bse21I	CCTNAGG	1 cut(s)	1443
Bse3DI	GCAATG	4 cut(s)	427, 828, 1158, 1819
BseBI	CCWGG	4 cut(s)	950, 1132, 1242, 1338
BseDI	CCNNGG	4 cut(s)	398, 526, 1336, 1337
BseGI	GGATG	6 cut(s)	216, 312, 508, 741, 1245, 2052
BseMI	GCAATG	4 cut(s)	427, 828, 1158, 1819
BseMII	CTCAG	3 cut(s)	1284, 1419, 1457
BseNI	ACTGG	3 cut(s)	319, 1757, 1994
BseRI	GAGGAG	4 cut(s)	313, 1214, 1409, 2211
BseSI	GKGCMC	1 cut(s)	2298
BseXI	GCAGC	3 cut(s)	1135, 1542, 1954
BseYI	CCCAGC	1 cut(s)	35
BsgI	GTGCAG	1 cut(s)	1699
BshFI	GGCC	2 cut(s)	1334, 2016
BshNI	GGYRCC	2 cut(s)	1474, 2295
BsiSI	CCGG	1 cut(s)	2314
BslFI	GGGAC	7 cut(s)	315, 1446, 1461, 2302, 2307, 2318, 2367
BsmAI	GTCTC	7 cut(s)	340, 776, 1003, 1570, 1891, 1956, 2172
BsmFI	GGGAC	7 cut(s)	315, 1446, 1461, 2302, 2307, 2318, 2367
BsmI	GAATGC	2 cut(s)	28, 2266
BsnI	GGCC	2 cut(s)	1334, 2016
Bso31I	GGTCTC	1 cut(s)	776
Bsp1286I	GDGCHC	1 cut(s)	2298
Bsp19I	CCATGG	1 cut(s)	526
BspACI	CCGC	2 cut(s)	1139, 2343
BspANI	GGCC	2 cut(s)	1334, 2016
BspCNI	CTCAG	3 cut(s)	1285, 1420, 1456
BspHI	TCATGA	1 cut(s)	798
BspLI	GGNNCC	8 cut(s)	1129, 1206, 1335, 1476, 1491, 1908, 2297, 2318
BspMAI	CTGCAG	1 cut(s)	1532
BspMI	ACCTGC	3 cut(s)	1297, 1671, 1759
BspPI	GGATC	5 cut(s)	701, 1149, 1901, 1914, 2367
BspQI	GCTCTTC	1 cut(s)	1193
BspT107I	GGYRCC	2 cut(s)	1474, 2295
BspTI	CTTAAG	2 cut(s)	1328, 2093
BspTNI	GGTCTC	1 cut(s)	776
BsrDI	GCAATG	4 cut(s)	427, 828, 1158, 1819
BsrI	ACTGG	3 cut(s)	319, 1757, 1994
BssECI	CCNNGG	4 cut(s)	398, 526, 1336, 1337
BssT1I	CCWWGG	2 cut(s)	398, 526
Bst2UI	CCWGG	4 cut(s)	950, 1132, 1242, 1338
Bst4CI	ACNGT	6 cut(s)	274, 559, 593, 746, 2089, 2332
Bst6I	CTCTTC	1 cut(s)	1193
BstAFI	CTTAAG	2 cut(s)	1328, 2093
BstC8I	GCNNGC	1 cut(s)	1631
BstDEI	CTNAG	4 cut(s)	1214, 1293, 1428, 1443
BstDSI	CCRYGG	1 cut(s)	526
BstF5I	GGATG	6 cut(s)	216, 312, 508, 741, 1245, 2052
BstMAI	GTCTC	7 cut(s)	340, 776, 1003, 1570, 1891, 1956, 2172
BstMWI	GCNNNNNNNGC	6 cut(s)	32, 1145, 1313, 1530, 1630, 2263
BstNI	CCWGG	4 cut(s)	950, 1132, 1242, 1338
BstNSI	RCATGY	2 cut(s)	1439, 1504
BstSCI	CCNGG	5 cut(s)	948, 1130, 1240, 1336, 2312
BstSFI	CTRYAG	2 cut(s)	697, 1528
BstSLI	GKGCMC	1 cut(s)	2298
BstV1I	GCAGC	3 cut(s)	1135, 1542, 1954
BstV2I	GAAGAC	1 cut(s)	491
BstX2I	RGATCY	1 cut(s)	1906
BstYI	RGATCY	1 cut(s)	1906
Bsu36I	CCTNAGG	1 cut(s)	1443
BsuRI	GGCC	2 cut(s)	1334, 2016
BtgI	CCRYGG	1 cut(s)	526
BtsCI	GGATG	6 cut(s)	216, 312, 508, 741, 1245, 2052
BtsI	GCAGTG	1 cut(s)	655
BtsIMutI	CAGTG	2 cut(s)	598, 655
BveI	ACCTGC	3 cut(s)	1297, 1671, 1759
Cac8I	GCNNGC	1 cut(s)	1631
CaiI	CAGNNNCTG	1 cut(s)	1527
CciI	TCATGA	1 cut(s)	798
Cfr13I	GGNCC	5 cut(s)	1205, 1333, 1490, 2015, 2316
Csp6I	GTAC	4 cut(s)	921, 1439, 1475, 2245
CspCI	CAANNNNNGTGG	2 cut(s)	433, 468
CviAII	CATG	8 cut(s)	481, 527, 799, 1145, 1436, 1501, 1939, 2104
CviQI	GTAC	4 cut(s)	921, 1439, 1475, 2245
DdeI	CTNAG	4 cut(s)	1214, 1293, 1428, 1443
DraI	TTTAAA	1 cut(s)	2370
Eam1104I	CTCTTC	1 cut(s)	1193
EarI	CTCTTC	1 cut(s)	1193
EciI	GGCGGA	1 cut(s)	2332
Eco130I	CCWWGG	2 cut(s)	398, 526
Eco31I	GGTCTC	1 cut(s)	776
Eco32I	GATATC	1 cut(s)	982
Eco47I	GGWCC	3 cut(s)	1205, 1490, 2316
Eco57I	CTGAAG	2 cut(s)	636, 2085
Eco81I	CCTNAGG	1 cut(s)	1443
EcoO109I	RGGNCCY	2 cut(s)	1205, 1333
EcoRI	GAATTC	1 cut(s)	1572
EcoRII	CCWGG	4 cut(s)	948, 1130, 1240, 1336
EcoRV	GATATC	1 cut(s)	982
EcoT14I	CCWWGG	2 cut(s)	398, 526
EcoT22I	ATGCAT	1 cut(s)	1821
ErhI	CCWWGG	2 cut(s)	398, 526
FaeI	CATG	8 cut(s)	484, 530, 802, 1148, 1439, 1504, 1942, 2107
FalI	AAGNNNNNCTT	2 cut(s)	1653, 1685
FaqI	GGGAC	7 cut(s)	315, 1446, 1461, 2302, 2307, 2318, 2367
FatI	CATG	8 cut(s)	480, 526, 798, 1144, 1435, 1500, 1938, 2103
FbaI	TGATCA	1 cut(s)	1117
FblI	GTMKAC	1 cut(s)	1685
Fnu4HI	GCNGC	3 cut(s)	1149, 1531, 1968
FokI	GGATG	6 cut(s)	223, 319, 515, 748, 1232, 2039
Fsp4HI	GCNGC	3 cut(s)	1149, 1531, 1968
FspBI	CTAG	6 cut(s)	27, 327, 891, 1020, 1569, 2271
GluI	GCNGC	3 cut(s)	1149, 1531, 1968
GsaI	CCCAGC	1 cut(s)	39
GsuI	CTGGAG	1 cut(s)	971
HaeIII	GGCC	2 cut(s)	1334, 2016
HapII	CCGG	1 cut(s)	2314
Hin1II	CATG	8 cut(s)	484, 530, 802, 1148, 1439, 1504, 1942, 2107
HincII	GTYRAC	1 cut(s)	312
HindII	GTYRAC	1 cut(s)	312
HindIII	AAGCTT	3 cut(s)	959, 1734, 2067
HinfI	GANTC	3 cut(s)	251, 1350, 1796
HpaI	GTTAAC	1 cut(s)	312
HpaII	CCGG	1 cut(s)	2314
HphI	GGTGA	4 cut(s)	53, 803, 1403, 1871
Hpy166II	GTNNAC	2 cut(s)	312, 1686
Hpy8I	GTNNAC	2 cut(s)	312, 1686
HpyAV	CCTTC	6 cut(s)	155, 445, 946, 1260, 1365, 1693
HpyCH4III	ACNGT	6 cut(s)	274, 559, 593, 746, 2089, 2332
HpyF10VI	GCNNNNNNNGC	6 cut(s)	32, 1145, 1313, 1530, 1630, 2263
HpyF3I	CTNAG	4 cut(s)	1214, 1293, 1428, 1443
Hsp92II	CATG	8 cut(s)	484, 530, 802, 1148, 1439, 1504, 1942, 2107
KpnI	GGTACC	1 cut(s)	1478
Ksp22I	TGATCA	1 cut(s)	1117
KspAI	GTTAAC	1 cut(s)	312
LguI	GCTCTTC	1 cut(s)	1193
Lsp1109I	GCAGC	3 cut(s)	1135, 1542, 1954
LweI	GCATC	3 cut(s)	726, 1254, 1833
MaeI	CTAG	6 cut(s)	27, 327, 891, 1020, 1569, 2271
MaeIII	GTNAC	3 cut(s)	393, 587, 2231
MboII	GAAGA	8 cut(s)	148, 496, 989, 1098, 1101, 1180, 1661, 2196
MfeI	CAATTG	1 cut(s)	1971
MflI	RGATCY	1 cut(s)	1906
MhlI	GDGCHC	1 cut(s)	2298
MmeI	TCCRAC	2 cut(s)	284, 1960
Mph1103I	ATGCAT	1 cut(s)	1821
MroXI	GAANNNNTTC	1 cut(s)	1668
MslI	CAYNNNNRTG	3 cut(s)	753, 1386, 1709
MspCI	CTTAAG	2 cut(s)	1328, 2093
MspI	CCGG	1 cut(s)	2314
MspR9I	CCNGG	5 cut(s)	950, 1132, 1242, 1338, 2314
MunI	CAATTG	1 cut(s)	1971
Mva1269I	GAATGC	2 cut(s)	28, 2266
MvaI	CCWGG	4 cut(s)	950, 1132, 1242, 1338
MwoI	GCNNNNNNNGC	6 cut(s)	32, 1145, 1313, 1530, 1630, 2263
NciI	CCSGG	1 cut(s)	2314
NcoI	CCATGG	1 cut(s)	526
NlaIII	CATG	8 cut(s)	484, 530, 802, 1148, 1439, 1504, 1942, 2107
NlaIV	GGNNCC	8 cut(s)	1129, 1206, 1335, 1476, 1491, 1908, 2297, 2318
NmuCI	GTSAC	1 cut(s)	2231
NsiI	ATGCAT	1 cut(s)	1821
NspI	RCATGY	2 cut(s)	1439, 1504
PagI	TCATGA	1 cut(s)	798
PaqCI	CACCTGC	1 cut(s)	1297
PasI	CCCWGGG	1 cut(s)	1337
PciI	ACATGT	1 cut(s)	1435
PciSI	GCTCTTC	1 cut(s)	1193
PctI	GAATGC	2 cut(s)	28, 2266
PdmI	GAANNNNTTC	1 cut(s)	1668
PfeI	GAWTC	3 cut(s)	251, 1350, 1796
PflFI	GACNNNGTC	1 cut(s)	351
PkrI	GCNGC	3 cut(s)	1150, 1532, 1969
PpuMI	RGGWCCY	1 cut(s)	1205
PscI	ACATGT	1 cut(s)	1435
PsiI	TTATAA	3 cut(s)	128, 1542, 1655
Psp5II	RGGWCCY	1 cut(s)	1205
Psp6I	CCWGG	4 cut(s)	948, 1130, 1240, 1336
PspFI	CCCAGC	1 cut(s)	35
PspGI	CCWGG	4 cut(s)	948, 1130, 1240, 1336
PspN4I	GGNNCC	8 cut(s)	1129, 1206, 1335, 1476, 1491, 1908, 2297, 2318
PspPI	GGNCC	5 cut(s)	1205, 1333, 1490, 2015, 2316
PspPPI	RGGWCCY	1 cut(s)	1205
PstI	CTGCAG	1 cut(s)	1532
PstNI	CAGNNNCTG	1 cut(s)	1527
PsuI	RGATCY	1 cut(s)	1906
PsyI	GACNNNGTC	1 cut(s)	351
RsaI	GTAC	4 cut(s)	922, 1440, 1476, 2246
RsaNI	GTAC	4 cut(s)	921, 1439, 1475, 2245
RseI	CAYNNNNRTG	3 cut(s)	753, 1386, 1709
SapI	GCTCTTC	1 cut(s)	1193
SatI	GCNGC	3 cut(s)	1149, 1531, 1968
Sau96I	GGNCC	5 cut(s)	1205, 1333, 1490, 2015, 2316
ScaI	AGTACT	1 cut(s)	2246
ScrFI	CCNGG	5 cut(s)	950, 1132, 1242, 1338, 2314
SduI	GDGCHC	1 cut(s)	2298
SfaNI	GCATC	3 cut(s)	726, 1254, 1833
SfcI	CTRYAG	2 cut(s)	697, 1528
SinI	GGWCC	3 cut(s)	1205, 1490, 2316
SmiMI	CAYNNNNRTG	3 cut(s)	753, 1386, 1709
SmlI	CTYRAG	4 cut(s)	1328, 1659, 2079, 2093
SmoI	CTYRAG	4 cut(s)	1328, 1659, 2079, 2093
SsiI	CCGC	2 cut(s)	1139, 2343
SspI	AATATT	1 cut(s)	862
SspMI	CTAG	6 cut(s)	27, 327, 891, 1020, 1569, 2271
StyD4I	CCNGG	5 cut(s)	948, 1130, 1240, 1336, 2312
StyI	CCWWGG	2 cut(s)	398, 526
TaaI	ACNGT	6 cut(s)	274, 559, 593, 746, 2089, 2332
TaqI	TCGA	3 cut(s)	90, 718, 1576
TatI	WGTACW	2 cut(s)	920, 2244
TfiI	GAWTC	3 cut(s)	251, 1350, 1796
TscAI	CASTG	2 cut(s)	598, 662
TseFI	GTSAC	1 cut(s)	2231
TseI	GCWGC	3 cut(s)	1148, 1530, 1967
Tsp45I	GTSAC	1 cut(s)	2231
TspRI	CASTG	2 cut(s)	598, 662
Tth111I	GACNNNGTC	1 cut(s)	351
Vha464I	CTTAAG	2 cut(s)	1328, 2093
VpaK11BI	GGWCC	3 cut(s)	1205, 1490, 2316
XbaI	TCTAGA	3 cut(s)	1019, 1568, 2270
XceI	RCATGY	2 cut(s)	1439, 1504
XmiI	GTMKAC	1 cut(s)	1685
XmnI	GAANNNNTTC	1 cut(s)	1668
XspI	CTAG	6 cut(s)	27, 327, 891, 1020, 1569, 2271
ZrmI	AGTACT	1 cut(s)	2246
Zsp2I	ATGCAT	1 cut(s)	1821

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.