Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0010903

Physical Location & Seq

Genomic Coordinates Reverse (-)

80717120 .. 80723431

Gene Structure 6312 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00058730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

ATGAAACCCTTCAGAACTGCATTTCCAACAACAGTTAATAGGAATTTTTCCCTGCGGTCGTCGAGGATTTGCGTCAAGAATTTGCCGAAACACGTCGACGATAAGAAGCTCCGGGAGCTTTTCTCCGAGAAAGGAGAAGTCACGGACGCCAAGCTCATGCGAACCAAGGAAGGCAAGAGCCGCCAGCCGTGGAGTCGACATACTAAGGAGAAGGAGAAGAGAGAGAGTGAAGATGCTGCGGCGGCGGAGGCGAAAAGCCGGAGCGGAGTGGGAGGGAAGAGGAGTGAGGATGAGGATGAGATTGATGATCCTAAGCTGAAGGAGTTTTTGCAGGTGATGCAGCCTAGGGCTAAGTCGAAATTGTGGTCGAATGACACTGTGATTGCTAATGTTGAGGGGAAAATTGGGAAAGGAGAGAAGAAGAGAGAGCAGACGAAGAAGGGGAATGAAGAGAGTTTGGCAACTATGGATGTGGAGGTAGAGGAGGATGTGGAGAAGGATGATTCGCACAATGTGGCCAAGGATAATGTGGTTTCGGATATGGATTACTTCAAGAGTAGAGTGAAGAAGGATTGGTCGGATTCCGAAAGTAGTGACAGTGATGATGAGGAAGAGGAGGAGGAAGGTGAAGAATTAGATGCTAAGGAAGAAGCTGAGGTTAATGAAGAAGAGGCAGGAGAGGAAGGTTCAGATGGACAAGTACTAGCGCAGAGTAATCCTTCGTCCAGTTTGAAAGATGAGATGCTTGATACTAGTCGGCTTTTTGTTCGAAATTTGCCATTTACCGCAACAGAGGACGAGTTGGAAGAGCATTTTAGCAAATTCGGGGATGCACAAGTTCATCTTGTTATTGATAAAGAAATGAATCGGTCCAAGGGAATTGCTTATGTTCTTTACTCGCATCCAGAATCGGCCCAAAGGGCATTAGAAGAATTAGACGGTTCAATTTTTCAAGGAAGATTGTTGCATGTTATGCCAGCAAAACAAAAAAACCCGTCTCCAGGGGCTGATGATTCAGCAAACCAACCTTCAAAGTCTCTTAAGCAACAAAGGGAGGAGAAGAGGAAAGCATCCGAAGCTAGTGGAGATACACGAGCATGGAATAGTTTGTTTATACGCACTGAGACAGCTGTTGATCACTTAGCTCGGAAGTTTGGGGTGAGCAAGAGTGATTTTCTTGACCCGCAAGCTGATGATGTTGCTAATTTTGCTGCTGGGAAAGGTGGTGATATGAAAAGAAGCAACCATGTTATACTTGTGAAAAACTTGCCATATGGTTCTTCTGATAGTGAACTAGGAAACATGTTTGGAAAATTTGGGAGTTTTGAAAAAATCATTATGCCTCCGACAAAGACATTGGCGTTGGTTGTTTTTTTTGAACCTTCTGGAGCTCGAGCAGCTTTTAAAGGTTTGGCATACAAGAAATACAAGGATGTTCCTCTATATTTGGAATGGGCTCCTGGCAATGTTCTTAGTCCAAGTTCAACAGCTGAGAGCAATGAAAAGAAGCATTCTGCTGTTGCTGAACGTAAGCCACTGGTGGAAGGAACTCCAGATGATCTTGATCTTGATCCTGATAGAGTTGAGTCACGAACGCTATATGTCAAGAATTTGAACTTCAAGACATCTGACGAGAGCTTGAAGAAGCATTTTGAACAAGTGAAGGAGGGAAGAATATTGAGCGCCAAGGTGAAGAAACACTTGAAAAAAGGGAAGAATCTTTCAATGGGATTTGGTTTTGTAGAATTTGACTCTGTGGAGACAGCCACAGAGGGAACAATTTTGGACGGCCACCAACTTATTTTGCAACATTGTCATGCCAAGCAAGATGATGTGCCAAAAAAAGTTGTGAAGGACAAAAGTTCAACAAAAATACTTGTAAAAAATGTAGCCTTTGAGGCTACAAAGAAAGAGCTTCGACAGTTGTTTAGTACATATGGCGAGATTAAAAGCTTGCGGTTACCAAACAGATTGGGACAGCATAGAGGCTTTGCATTTGTGGAGTTTGCCACAAAGCAAGAGGCAGAAAATGCCATCCAAGCGCTTGCAAGCACACATCTGTACGGTCGCCATCTGGTTCTGGAGAGAGCAAAGGAAGGTGAGACCTTGGAAGATTTAAGAGCTCGAATAGCTGCTCAGTTCACAGATGACCAAAATACTATTTCCAGGAAAAGGAAGGCTGTCGCAACCTTGGATGAAGATAACATGAAATTTGATATGACTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000028 GO:0000447 GO:0000460 GO:0000462 GO:0000466 GO:0000469 GO:0000472 GO:0000478 GO:0000479 GO:0000480 GO:0000966 GO:0000967 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0019843 GO:0022607 GO:0022613 GO:0022618 GO:0030490 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032991 GO:0034462 GO:0034470 GO:0034471 GO:0034622 GO:0034641 GO:0034660 GO:0042134 GO:0042254 GO:0042255 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0065003 GO:0070013 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1

Protein Analysis

742

Amino Acids

83.38

Weight (kDa)

5.81

Isoelectric Point (pI)

41.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	23 - 61	2.4e-06	RNA recognition motif
RRM_1	PF00076	254 - 322	6.1e-18	RNA recognition motif
RRM_1	PF00076	418 - 478	1.6e-07	RNA recognition motif
RRM_1	PF00076	533 - 591	1.1e-09	RNA recognition motif
RRM_1	PF00076	625 - 692	1.3e-18	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010903)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19610 AT5G05720 AT5G08695
fragaria_vesca	FvH4_3g11840
malus_domestica	MD05G1258600.v1.1 MD10G1238300.v1.1
prunus_persica	Prupe.4G106000_v2.0.a1
pyrus_communis	pycom10g19930
rosa_chinensis	RchiOBHm_Chr5g0019271
rosa_laevigata	RLG00000032433
rosa_multiflora	Rmu_sc0004608.1_g000004
rosa_roxburghii	Rroxscaffold_1G00058730 Rroxscaffold_1G00074200
rosa_rugosa	Rorug05G0049100 Rorug05G0049200
rosa_samantha	Rh5AG140200 Rh5BG139200 Rh5CG150600 Rh5DG139800
rosa_wichuraiana	Rw5G012470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	322
Acc36I	ACCTGC	1 cut(s)	322
AccBSI	CCGCTC	1 cut(s)	264
AccI	GTMKAC	2 cut(s)	96, 196
AciI	CCGC	9 cut(s)	55, 181, 239, 242, 245, 264, 786, 1184, 1957
AclWI	GGATC	2 cut(s)	302, 1565
AcoI	YGGCCR	2 cut(s)	516, 1789
AcsI	RAATTY	8 cut(s)	43, 79, 772, 821, 1313, 1609, 1745, 2210
AcuI	CTGAAG	1 cut(s)	338
AcyI	GRCGYC	1 cut(s)	147
AdeI	CACNNNGTG	1 cut(s)	514
AfaI	GTAC	3 cut(s)	702, 1933, 2063
AfeI	AGCGCT	1 cut(s)	2043
AfiI	CCNNNNNNNGG	2 cut(s)	1001, 2172
AflII	CTTAAG	1 cut(s)	1040
AflIII	ACRYGT	2 cut(s)	91, 1302
AhlI	ACTAGT	1 cut(s)	752
AjiI	CACGTC	1 cut(s)	94
AjnI	CCWGG	3 cut(s)	1000, 1459, 2165
AloI	GAACNNNNNNTCC	2 cut(s)	7, 39
Alw21I	GWGCWC	2 cut(s)	1393, 2125
Alw26I	GTCTC	5 cut(s)	1002, 1041, 1118, 1754, 2096
AlwI	GGATC	2 cut(s)	302, 1565
AlwNI	CAGNNNCTG	1 cut(s)	1007
Ama87I	CYCGRG	1 cut(s)	1392
Aor51HI	AGCGCT	1 cut(s)	2043
AoxI	GGCC	3 cut(s)	516, 912, 1789
ApeKI	GCWGC	5 cut(s)	236, 340, 1211, 1397, 2132
ApoI	RAATTY	8 cut(s)	43, 79, 772, 821, 1313, 1609, 1745, 2210
ArsI	GACNNNNNNTTYG	2 cut(s)	350, 382
Asp700I	GAANNNNTTC	1 cut(s)	8
AspA2I	CCTAGG	1 cut(s)	344
AspLEI	GCGC	3 cut(s)	709, 1685, 2044
AspS9I	GGNCC	2 cut(s)	870, 913
AsuC2I	CCSGG	1 cut(s)	113
AsuHPI	GGTGA	6 cut(s)	346, 638, 1171, 1238, 1702, 2111
AsuII	TTCGAA	1 cut(s)	769
AvaI	CYCGRG	1 cut(s)	1392
AvaII	GGWCC	1 cut(s)	870
AvrII	CCTAGG	1 cut(s)	344
BalI	TGGCCA	1 cut(s)	518
BanII	GRGCYC	3 cut(s)	1393, 1459, 2125
BauI	CACGAG	1 cut(s)	1092
Bbv12I	GWGCWC	2 cut(s)	1393, 2125
BbvCI	CCTCAGC	1 cut(s)	654
BbvI	GCAGC	5 cut(s)	223, 352, 1198, 1409, 2119
BccI	CCATC	3 cut(s)	686, 2042, 2079
BceAI	ACGGC	2 cut(s)	172, 1804
BciT130I	CCWGG	3 cut(s)	1002, 1461, 2167
BclI	TGATCA	1 cut(s)	1135
BcnI	CCSGG	1 cut(s)	113
BcoDI	GTCTC	5 cut(s)	1002, 1041, 1118, 1754, 2096
BcuI	ACTAGT	1 cut(s)	752
BfaI	CTAG	5 cut(s)	345, 704, 753, 1080, 1295
BfoI	RGCGCY	2 cut(s)	1686, 2045
BfrI	CTTAAG	1 cut(s)	1040
BfuAI	ACCTGC	1 cut(s)	322
BglI	GCCNNNNNGGC	2 cut(s)	920, 1898
BisI	GCNGC	8 cut(s)	181, 237, 240, 243, 341, 1212, 1398, 2133
BlnI	CCTAGG	1 cut(s)	344
BlsI	GCNGC	8 cut(s)	182, 238, 241, 244, 342, 1213, 1399, 2134
BmcAI	AGTACT	1 cut(s)	702
Bme1390I	CCNGG	4 cut(s)	113, 1002, 1461, 2167
Bme18I	GGWCC	1 cut(s)	870
BmeT110I	CYCGRG	1 cut(s)	1392
BmgBI	CACGTC	1 cut(s)	94
BmgT120I	GGNCC	2 cut(s)	870, 913
BmiI	GGNNCC	1 cut(s)	1458
BmrFI	CCNGG	4 cut(s)	113, 1002, 1461, 2167
BmsI	GCATC	7 cut(s)	223, 327, 628, 732, 820, 910, 1079
BplI	GAGNNNNNCTC	2 cut(s)	107, 139
BpmI	CTGGAG	4 cut(s)	984, 1407, 1536, 2102
Bpu10I	CCTNAGC	3 cut(s)	312, 642, 654
Bpu14I	TTCGAA	1 cut(s)	769
BpuMI	CCSGG	1 cut(s)	113
BsaBI	GATNNNNATC	2 cut(s)	1563, 1569
BsaHI	GRCGYC	1 cut(s)	147
BsaI	GGTCTC	1 cut(s)	2096
BsaJI	CCNNGG	9 cut(s)	165, 188, 344, 519, 873, 1001, 1686, 2106, 2190
Bsc4I	CCNNNNNNNGG	2 cut(s)	1001, 2172
Bse1I	ACTGG	2 cut(s)	726, 1542
Bse3DI	GCAATG	2 cut(s)	1471, 1504
Bse8I	GATNNNNATC	2 cut(s)	1563, 1569
BseBI	CCWGG	3 cut(s)	1002, 1461, 2167
BseDI	CCNNGG	9 cut(s)	165, 188, 344, 519, 873, 1001, 1686, 2106, 2190
BseJI	GATNNNNATC	2 cut(s)	1563, 1569
BseLI	CCNNNNNNNGG	2 cut(s)	1001, 2172
BseMI	GCAATG	2 cut(s)	1471, 1504
BseMII	CTCAG	4 cut(s)	645, 1113, 1482, 2150
BseNI	ACTGG	2 cut(s)	726, 1542
BseRI	GAGGAG	5 cut(s)	295, 497, 629, 632, 1070
BseXI	GCAGC	5 cut(s)	223, 352, 1198, 1409, 2119
BseYI	CCCAGC	1 cut(s)	1214
Bsh1285I	CGRYCG	2 cut(s)	59, 2068
BshFI	GGCC	3 cut(s)	518, 914, 1791
BsiEI	CGRYCG	2 cut(s)	59, 2068
BsiHKAI	GWGCWC	2 cut(s)	1393, 2125
BsiHKCI	CYCGRG	1 cut(s)	1392
BsiSI	CCGG	2 cut(s)	112, 259
BslFI	GGGAC	1 cut(s)	1989
BslI	CCNNNNNNNGG	2 cut(s)	1001, 2172
BsmAI	GTCTC	5 cut(s)	1002, 1041, 1118, 1754, 2096
BsmBI	CGTCTC	1 cut(s)	1002
BsmFI	GGGAC	1 cut(s)	1989
BsmI	GAATGC	1 cut(s)	1510
BsnI	GGCC	3 cut(s)	518, 914, 1791
Bso31I	GGTCTC	1 cut(s)	2096
BsoBI	CYCGRG	1 cut(s)	1392
Bsp119I	TTCGAA	1 cut(s)	769
Bsp1286I	GDGCHC	3 cut(s)	1393, 1459, 2125
Bsp143I	GATC	5 cut(s)	307, 1135, 1558, 1564, 1570
BspACI	CCGC	9 cut(s)	55, 181, 239, 242, 245, 264, 786, 1184, 1957
BspANI	GGCC	3 cut(s)	518, 914, 1791
BspCNI	CTCAG	4 cut(s)	646, 1114, 1483, 2149
BspLI	GGNNCC	1 cut(s)	1458
BspMI	ACCTGC	1 cut(s)	322
BspPI	GGATC	2 cut(s)	302, 1565
BspQI	GCTCTTC	1 cut(s)	801
BspT104I	TTCGAA	1 cut(s)	769
BspTI	CTTAAG	1 cut(s)	1040
BspTNI	GGTCTC	1 cut(s)	2096
BsrBI	CCGCTC	1 cut(s)	264
BsrDI	GCAATG	2 cut(s)	1471, 1504
BsrI	ACTGG	2 cut(s)	726, 1542
BssECI	CCNNGG	9 cut(s)	165, 188, 344, 519, 873, 1001, 1686, 2106, 2190
BssMI	GATC	5 cut(s)	307, 1135, 1558, 1564, 1570
BssNI	GRCGYC	1 cut(s)	147
BssSI	CACGAG	1 cut(s)	1092
BssT1I	CCWWGG	7 cut(s)	165, 344, 519, 873, 1686, 2106, 2190
Bst2BI	CACGAG	1 cut(s)	1092
Bst2UI	CCWGG	3 cut(s)	1002, 1461, 2167
Bst4CI	ACNGT	6 cut(s)	34, 379, 599, 941, 1923, 2066
Bst6I	CTCTTC	8 cut(s)	212, 272, 416, 444, 606, 663, 801, 1055
BstACI	GRCGYC	1 cut(s)	147
BstAFI	CTTAAG	1 cut(s)	1040
BstAPI	GCANNNNNTGC	3 cut(s)	337, 973, 2030
BstBI	TTCGAA	1 cut(s)	769
BstC8I	GCNNGC	6 cut(s)	185, 978, 1188, 1955, 2046, 2050
BstDSI	CCRYGG	1 cut(s)	188
BstEII	GGTNACC	1 cut(s)	1959
BstH2I	RGCGCY	2 cut(s)	1686, 2045
BstHHI	GCGC	3 cut(s)	709, 1685, 2044
BstKTI	GATC	5 cut(s)	310, 1138, 1561, 1567, 1573
BstMAI	GTCTC	5 cut(s)	1002, 1041, 1118, 1754, 2096
BstMBI	GATC	5 cut(s)	307, 1135, 1558, 1564, 1570
BstMCI	CGRYCG	2 cut(s)	59, 2068
BstNI	CCWGG	3 cut(s)	1002, 1461, 2167
BstNSI	RCATGY	2 cut(s)	971, 1306
BstPI	GGTNACC	1 cut(s)	1959
BstSCI	CCNGG	4 cut(s)	111, 1000, 1459, 2165
BstV1I	GCAGC	5 cut(s)	223, 352, 1198, 1409, 2119
BsuRI	GGCC	3 cut(s)	518, 914, 1791
BtgI	CCRYGG	1 cut(s)	188
BtrI	CACGTC	1 cut(s)	94
BtsIMutI	CAGTG	4 cut(s)	375, 604, 1119, 1535
BveI	ACCTGC	1 cut(s)	322
Cac8I	GCNNGC	6 cut(s)	185, 978, 1188, 1955, 2046, 2050
CaiI	CAGNNNCTG	1 cut(s)	1007
CfoI	GCGC	3 cut(s)	709, 1685, 2044
Cfr13I	GGNCC	2 cut(s)	870, 913
CseI	GACGC	2 cut(s)	61, 155
Csp6I	GTAC	3 cut(s)	701, 1932, 2062
CviAII	CATG	7 cut(s)	157, 968, 1098, 1247, 1303, 1817, 2206
CviQI	GTAC	3 cut(s)	701, 1932, 2062
DpnI	GATC	5 cut(s)	309, 1137, 1560, 1566, 1572
DpnII	GATC	5 cut(s)	307, 1135, 1558, 1564, 1570
DraI	TTTAAA	1 cut(s)	1405
DraIII	CACNNNGTG	1 cut(s)	514
EaeI	YGGCCR	2 cut(s)	516, 1789
Eam1104I	CTCTTC	8 cut(s)	212, 272, 416, 444, 606, 663, 801, 1055
EarI	CTCTTC	8 cut(s)	212, 272, 416, 444, 606, 663, 801, 1055
EciI	GGCGGA	1 cut(s)	260
Ecl136II	GAGCTC	2 cut(s)	1391, 2123
Eco130I	CCWWGG	7 cut(s)	165, 344, 519, 873, 1686, 2106, 2190
Eco24I	GRGCYC	3 cut(s)	1393, 1459, 2125
Eco31I	GGTCTC	1 cut(s)	2096
Eco47I	GGWCC	1 cut(s)	870
Eco47III	AGCGCT	1 cut(s)	2043
Eco53kI	GAGCTC	2 cut(s)	1391, 2123
Eco57I	CTGAAG	1 cut(s)	338
Eco88I	CYCGRG	1 cut(s)	1392
Eco91I	GGTNACC	1 cut(s)	1959
EcoICRI	GAGCTC	2 cut(s)	1391, 2123
EcoO65I	GGTNACC	1 cut(s)	1959
EcoRII	CCWGG	3 cut(s)	1000, 1459, 2165
EcoT14I	CCWWGG	7 cut(s)	165, 344, 519, 873, 1686, 2106, 2190
EcoT38I	GRGCYC	3 cut(s)	1393, 1459, 2125
ErhI	CCWWGG	7 cut(s)	165, 344, 519, 873, 1686, 2106, 2190
Esp3I	CGTCTC	1 cut(s)	1002
FaeI	CATG	7 cut(s)	160, 971, 1101, 1250, 1306, 1820, 2209
FalI	AAGNNNNNCTT	4 cut(s)	828, 860, 1685, 1717
FaqI	GGGAC	1 cut(s)	1989
FatI	CATG	7 cut(s)	156, 967, 1097, 1246, 1302, 1816, 2205
FauI	CCCGC	1 cut(s)	1191
FauNDI	CATATG	2 cut(s)	1273, 1936
FbaI	TGATCA	1 cut(s)	1135
FblI	GTMKAC	2 cut(s)	96, 196
Fnu4HI	GCNGC	8 cut(s)	181, 237, 240, 243, 341, 1212, 1398, 2133
FriOI	GRGCYC	3 cut(s)	1393, 1459, 2125
Fsp4HI	GCNGC	8 cut(s)	181, 237, 240, 243, 341, 1212, 1398, 2133
FspBI	CTAG	5 cut(s)	345, 704, 753, 1080, 1295
GlaI	GCGC	3 cut(s)	708, 1684, 2043
GluI	GCNGC	8 cut(s)	181, 237, 240, 243, 341, 1212, 1398, 2133
GsaI	CCCAGC	1 cut(s)	1218
GsuI	CTGGAG	4 cut(s)	984, 1407, 1536, 2102
HaeII	RGCGCY	2 cut(s)	1686, 2045
HaeIII	GGCC	3 cut(s)	518, 914, 1791
HapII	CCGG	2 cut(s)	112, 259
HgaI	GACGC	2 cut(s)	61, 155
HhaI	GCGC	3 cut(s)	709, 1685, 2044
Hin1I	GRCGYC	1 cut(s)	147
Hin1II	CATG	7 cut(s)	160, 971, 1101, 1250, 1306, 1820, 2209
Hin6I	GCGC	3 cut(s)	707, 1683, 2042
HinP1I	GCGC	3 cut(s)	707, 1683, 2042
HincII	GTYRAC	2 cut(s)	97, 197
HindII	GTYRAC	2 cut(s)	97, 197
HindIII	AAGCTT	1 cut(s)	1951
HinfI	GANTC	9 cut(s)	193, 503, 581, 865, 908, 1013, 1586, 1717, 1751
HpaII	CCGG	2 cut(s)	112, 259
HphI	GGTGA	6 cut(s)	346, 638, 1171, 1238, 1702, 2111
Hpy166II	GTNNAC	4 cut(s)	97, 197, 1292, 2142
Hpy8I	GTNNAC	4 cut(s)	97, 197, 1292, 2142
Hpy99I	CGWCG	3 cut(s)	64, 98, 101
HpyCH4III	ACNGT	6 cut(s)	34, 379, 599, 941, 1923, 2066
HpyCH4IV	ACGT	2 cut(s)	93, 1528
HpyCH4V	TGCA	8 cut(s)	20, 331, 340, 833, 967, 1807, 1994, 2048
HpySE526I	ACGT	2 cut(s)	93, 1528
Hsp92I	GRCGYC	1 cut(s)	147
Hsp92II	CATG	7 cut(s)	160, 971, 1101, 1250, 1306, 1820, 2209
HspAI	GCGC	3 cut(s)	707, 1683, 2042
Ksp22I	TGATCA	1 cut(s)	1135
Kzo9I	GATC	5 cut(s)	307, 1135, 1558, 1564, 1570
LguI	GCTCTTC	1 cut(s)	801
LmnI	GCTCC	5 cut(s)	114, 115, 261, 1388, 1462
Lsp1109I	GCAGC	5 cut(s)	223, 352, 1198, 1409, 2119
LweI	GCATC	7 cut(s)	223, 327, 628, 732, 820, 910, 1079
MaeI	CTAG	5 cut(s)	345, 704, 753, 1080, 1295
MaeII	ACGT	2 cut(s)	93, 1528
MaeIII	GTNAC	4 cut(s)	139, 593, 1587, 1959
MalI	GATC	5 cut(s)	309, 1137, 1560, 1566, 1572
MbiI	CCGCTC	1 cut(s)	264
MboI	GATC	5 cut(s)	307, 1135, 1558, 1564, 1570
MhlI	GDGCHC	3 cut(s)	1393, 1459, 2125
MlsI	TGGCCA	1 cut(s)	518
MluNI	TGGCCA	1 cut(s)	518
MlyI	GAGTC	3 cut(s)	202, 1595, 1745
MmeI	TCCRAC	4 cut(s)	50, 558, 783, 1370
Mox20I	TGGCCA	1 cut(s)	518
MroXI	GAANNNNTTC	1 cut(s)	8
MscI	TGGCCA	1 cut(s)	518
MseI	TTAA	6 cut(s)	36, 660, 1041, 1404, 1947, 2117
MslI	CAYNNNNRTG	2 cut(s)	1096, 1815
Msp20I	TGGCCA	1 cut(s)	518
MspA1I	CMGCKG	2 cut(s)	1130, 1490
MspCI	CTTAAG	1 cut(s)	1040
MspI	CCGG	2 cut(s)	112, 259
MspR9I	CCNGG	4 cut(s)	113, 1002, 1461, 2167
Mva1269I	GAATGC	1 cut(s)	1510
MvaI	CCWGG	3 cut(s)	1002, 1461, 2167
NciI	CCSGG	1 cut(s)	113
NdeI	CATATG	2 cut(s)	1273, 1936
NdeII	GATC	5 cut(s)	307, 1135, 1558, 1564, 1570
NlaIII	CATG	7 cut(s)	160, 971, 1101, 1250, 1306, 1820, 2209
NlaIV	GGNNCC	1 cut(s)	1458
NmuCI	GTSAC	3 cut(s)	139, 593, 1587
NspI	RCATGY	2 cut(s)	971, 1306
NspV	TTCGAA	1 cut(s)	769
PaeR7I	CTCGAG	1 cut(s)	1392
PaqCI	CACCTGC	1 cut(s)	322
PciI	ACATGT	1 cut(s)	1302
PciSI	GCTCTTC	1 cut(s)	801
PctI	GAATGC	1 cut(s)	1510
PdmI	GAANNNNTTC	1 cut(s)	8
PfeI	GAWTC	6 cut(s)	503, 581, 865, 908, 1013, 1717
PfoI	TCCNGGA	2 cut(s)	111, 2165
PkrI	GCNGC	8 cut(s)	182, 238, 241, 244, 342, 1213, 1399, 2134
PleI	GAGTC	3 cut(s)	201, 1594, 1745
PpsI	GAGTC	3 cut(s)	201, 1594, 1745
PscI	ACATGT	1 cut(s)	1302
Psp124BI	GAGCTC	2 cut(s)	1393, 2125
Psp6I	CCWGG	3 cut(s)	1000, 1459, 2165
PspEI	GGTNACC	1 cut(s)	1959
PspFI	CCCAGC	1 cut(s)	1214
PspGI	CCWGG	3 cut(s)	1000, 1459, 2165
PspN4I	GGNNCC	1 cut(s)	1458
PspPI	GGNCC	2 cut(s)	870, 913
PspXI	VCTCGAGB	1 cut(s)	1392
PstNI	CAGNNNCTG	1 cut(s)	1007
PvuII	CAGCTG	2 cut(s)	1130, 1490
RsaI	GTAC	3 cut(s)	702, 1933, 2063
RsaNI	GTAC	3 cut(s)	701, 1932, 2062
RseI	CAYNNNNRTG	2 cut(s)	1096, 1815
SacI	GAGCTC	2 cut(s)	1393, 2125
SalI	GTCGAC	2 cut(s)	95, 195
SapI	GCTCTTC	1 cut(s)	801
SaqAI	TTAA	6 cut(s)	36, 660, 1041, 1404, 1947, 2117
SatI	GCNGC	8 cut(s)	181, 237, 240, 243, 341, 1212, 1398, 2133
Sau3AI	GATC	5 cut(s)	307, 1135, 1558, 1564, 1570
Sau96I	GGNCC	2 cut(s)	870, 913
ScaI	AGTACT	1 cut(s)	702
SchI	GAGTC	3 cut(s)	202, 1595, 1745
ScrFI	CCNGG	4 cut(s)	113, 1002, 1461, 2167
SduI	GDGCHC	3 cut(s)	1393, 1459, 2125
SfaNI	GCATC	7 cut(s)	223, 327, 628, 732, 820, 910, 1079
Sfr274I	CTCGAG	1 cut(s)	1392
SfuI	TTCGAA	1 cut(s)	769
SgrDI	CGTCGACG	1 cut(s)	95
SinI	GGWCC	1 cut(s)	870
SlaI	CTCGAG	1 cut(s)	1392
SmiMI	CAYNNNNRTG	2 cut(s)	1096, 1815
SmlI	CTYRAG	2 cut(s)	1040, 1392
SmoI	CTYRAG	2 cut(s)	1040, 1392
SpeI	ACTAGT	1 cut(s)	752
SsiI	CCGC	9 cut(s)	55, 181, 239, 242, 245, 264, 786, 1184, 1957
SspI	AATATT	1 cut(s)	1677
SspMI	CTAG	5 cut(s)	345, 704, 753, 1080, 1295
SstI	GAGCTC	2 cut(s)	1393, 2125
StyD4I	CCNGG	4 cut(s)	111, 1000, 1459, 2165
StyI	CCWWGG	7 cut(s)	165, 344, 519, 873, 1686, 2106, 2190
TaaI	ACNGT	6 cut(s)	34, 379, 599, 941, 1923, 2066
TaiI	ACGT	2 cut(s)	96, 1531
TaqI	TCGA	9 cut(s)	62, 96, 196, 356, 368, 769, 1393, 1918, 2125
TaqII	GACCGA	1 cut(s)	858
TatI	WGTACW	2 cut(s)	700, 1931
TauI	GCSGC	3 cut(s)	183, 242, 245
TfiI	GAWTC	6 cut(s)	503, 581, 865, 908, 1013, 1717
Tru1I	TTAA	6 cut(s)	36, 660, 1041, 1404, 1947, 2117
Tru9I	TTAA	6 cut(s)	36, 660, 1041, 1404, 1947, 2117
TscAI	CASTG	4 cut(s)	382, 604, 1126, 1542
TseFI	GTSAC	3 cut(s)	139, 593, 1587
TseI	GCWGC	5 cut(s)	236, 340, 1211, 1397, 2132
Tsp45I	GTSAC	3 cut(s)	139, 593, 1587
TspDTI	ATGAA	9 cut(s)	17, 462, 678, 830, 878, 1247, 1515, 2211, 2222
TspGWI	ACGGA	1 cut(s)	158
TspRI	CASTG	4 cut(s)	382, 604, 1126, 1542
Vha464I	CTTAAG	1 cut(s)	1040
VpaK11BI	GGWCC	1 cut(s)	870
XapI	RAATTY	8 cut(s)	43, 79, 772, 821, 1313, 1609, 1745, 2210
XceI	RCATGY	2 cut(s)	971, 1306
XcmI	CCANNNNNNNNNTGG	1 cut(s)	526
XhoI	CTCGAG	1 cut(s)	1392
XmaJI	CCTAGG	1 cut(s)	344
XmiI	GTMKAC	2 cut(s)	96, 196
XmnI	GAANNNNTTC	1 cut(s)	8
XspI	CTAG	5 cut(s)	345, 704, 753, 1080, 1295
ZrmI	AGTACT	1 cut(s)	702

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.