Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0010903

Physical Location & Seq

Genomic Coordinates Forward (+)

13851018 .. 13855803

Gene Structure 4786 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG150600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGGATGTGGAGGTAGAGGAGGAAGTGGAGAAGGATGATTCACACAATGTGGCCAAGGATAATGTGGTTTCGGATATGGATTACTTCAAGAGTAGAGTGAAGAAGGATTGGTCGGATTCTGAAACAACAGAGGACGAGTTGGAAGAGCATTTTTGCAAATTCGGGGATGCACAAGTTCATCTTGTTATTGATAAAGAAATGAATCGGTCCAAGGGAATTGCTTATGTTCTTTACTCGCATCCAGAATCGGCACAAAGGGCATTAGAAGAATTAGACGGTTCAATTTTTCAAGGAAGATTGTTGCATGTTATGCCAGCAAAACAAAAAAACCCGTCTCCAGGGGCTGATGATTCGGCAAACCAAGCTTCAAAGTCTCTTAAGCAACAAAGGGAGGAGAAGAGGAAAGCATCCGAAGCTAGTGGAGATACACGAGCATGGAATAGTTTGTTTATACGCACTGAGACAGCTGTTGATCACTTAGCTCGGAAGTTTGGGGTGAGCAAGAGTGATTTTCTTGACCCGCAAGCTGATGATGTCGCTGTACGTGTTGCTCAAGCAGAGACACAAGTGATTGCGCAGACAAAAAAGGCTCTTACAAATGCTGGTGTAAATGTAGAATCTTTAGAGAATTTTGCTGCTGGGAAAGGTGGTGATATGAAAAGAAGCAACCATGTTATACTTGTGAAAAACTTGCCATATGGTTCTTCTGATAGTGAACTAGGAAACATGTTTGGAAAATTTGGGAGTTTTGAAAAAATCATTATGCCTCCGACAAAGACATTGGCGTTGGTTGTCTTTTTTGAACCTTCTGGAGCTCGAGCAGCTTTTAAAGGTTTGGCGTACAAGAAATACAAGGATGTTCCTCTATATTTGGAATGGGCTCCTGGCAATGTTCTTAGTCCAAGTTCAACAGCTGAGAGCAATGAAAAGAAGCATTCTGCTGTTGCTGAACATAAGCCACTGGTGGAAGGAACTCCAGATGATCTTGATCTTGATCCTGATAGAGTTGAGTCACGAACTCTATATGTCAAGAATTTGAACTTCAAGACATCTGACGAGAGCTTGAAGAAGCATTTTGAACAAGTGAAGGAGGGAAGAATATTGAGCGCCAAGGTGAAGAAACATTTGAAAAAAGGGAAGAATCTTTCAATGGGATTTGGTTTTGTAGAATTTGACTCTGTGGAGACAACCACAGAGGTTTGCAAGAGTTTACAGGGAACAATTTTGGATGGCCACCAACTTATTTTGCAACATTGTCATGCCAAGCAAGATGACGTGCCAAAAAAAGTTGTGAAGGACAAAAGTTCAACAAAAATACTTGTAAAAAATGTAGCCTTTGAGGCTACAAAGAAAGAGCTTCGACAGTTGTTTAGTACATATGGCGAGATTAAAAGCTTGCGGTTACCAAACAGATTGGGACAGCATAGAGGCTTTGCATTTGTGGAGTTTGCCACAAAGCAAGAGGCAGAAAATGCCATCCAAGCGCTTGCAAGCACACATCTGTACGGTCGCCATCTGGTTCTGGAGAGAGCAAAGGAAGGTGAGACCTTGGAAGATTTAAGAGCTCGAATAGCTGCTCAGTTCACAGATGACCAAAATACTATTTCCAGGAAAAGGAAGGCTGTCGCAACCTTGGATGAAGATAACATGAAATTTGATATGACTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000028 GO:0000447 GO:0000460 GO:0000462 GO:0000466 GO:0000469 GO:0000472 GO:0000478 GO:0000479 GO:0000480 GO:0000966 GO:0000967 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0019843 GO:0022607 GO:0022613 GO:0022618 GO:0030490 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032991 GO:0034462 GO:0034470 GO:0034471 GO:0034622 GO:0034641 GO:0034660 GO:0042134 GO:0042254 GO:0042255 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0065003 GO:0070013 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1

Protein Analysis

556

Amino Acids

62.21

Weight (kDa)

6.42

Isoelectric Point (pI)

32.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	40 - 101	2e-12	RNA recognition motif
RRM_1	PF00076	226 - 286	1.1e-07	RNA recognition motif
RRM_1	PF00076	341 - 414	4.7e-13	RNA recognition motif
RRM_1	PF00076	439 - 506	8.5e-19	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010903)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19610 AT5G05720 AT5G08695
fragaria_vesca	FvH4_3g11840
malus_domestica	MD05G1258600.v1.1 MD10G1238300.v1.1
prunus_persica	Prupe.4G106000_v2.0.a1
pyrus_communis	pycom10g19930
rosa_chinensis	RchiOBHm_Chr5g0019271
rosa_laevigata	RLG00000032433
rosa_multiflora	Rmu_sc0004608.1_g000004
rosa_roxburghii	Rroxscaffold_1G00058730 Rroxscaffold_1G00074200
rosa_rugosa	Rorug05G0049100 Rorug05G0049200
rosa_samantha	Rh5AG140200 Rh5BG139200 Rh5CG150600 Rh5DG139800
rosa_wichuraiana	Rw5G012470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	576
AciI	CCGC	2 cut(s)	521, 1399
AclWI	GGATC	1 cut(s)	989
AcoI	YGGCCR	2 cut(s)	51, 1231
AcsI	RAATTY	6 cut(s)	158, 628, 737, 1033, 1169, 1652
AdeI	CACNNNGTG	1 cut(s)	49
AfaI	GTAC	4 cut(s)	543, 842, 1375, 1505
AfeI	AGCGCT	1 cut(s)	1485
AfiI	CCNNNNNNNGG	2 cut(s)	338, 1614
AflII	CTTAAG	1 cut(s)	377
AflIII	ACRYGT	2 cut(s)	544, 726
AjiI	CACGTC	1 cut(s)	1276
AjnI	CCWGG	3 cut(s)	337, 883, 1607
Alw21I	GWGCWC	2 cut(s)	817, 1567
Alw26I	GTCTC	6 cut(s)	339, 378, 455, 554, 1178, 1538
AlwI	GGATC	1 cut(s)	989
AlwNI	CAGNNNCTG	1 cut(s)	344
Ama87I	CYCGRG	1 cut(s)	816
Aor51HI	AGCGCT	1 cut(s)	1485
AoxI	GGCC	2 cut(s)	51, 1231
ApeKI	GCWGC	3 cut(s)	635, 821, 1574
ApoI	RAATTY	6 cut(s)	158, 628, 737, 1033, 1169, 1652
AspLEI	GCGC	3 cut(s)	577, 1109, 1486
AspS9I	GGNCC	1 cut(s)	207
AsuHPI	GGTGA	4 cut(s)	508, 662, 1126, 1553
AvaI	CYCGRG	1 cut(s)	816
AvaII	GGWCC	1 cut(s)	207
BalI	TGGCCA	2 cut(s)	53, 1233
BanII	GRGCYC	3 cut(s)	817, 883, 1567
BauI	CACGAG	1 cut(s)	429
Bbv12I	GWGCWC	2 cut(s)	817, 1567
BbvI	GCAGC	3 cut(s)	622, 833, 1561
BccI	CCATC	3 cut(s)	1223, 1484, 1521
BciT130I	CCWGG	3 cut(s)	339, 885, 1609
BclI	TGATCA	1 cut(s)	472
BcoDI	GTCTC	6 cut(s)	339, 378, 455, 554, 1178, 1538
BfaI	CTAG	2 cut(s)	417, 719
BfoI	RGCGCY	2 cut(s)	1110, 1487
BfrI	CTTAAG	1 cut(s)	377
BglI	GCCNNNNNGGC	1 cut(s)	1340
BisI	GCNGC	3 cut(s)	636, 822, 1575
BlsI	GCNGC	3 cut(s)	637, 823, 1576
Bme1390I	CCNGG	3 cut(s)	339, 885, 1609
Bme18I	GGWCC	1 cut(s)	207
BmeT110I	CYCGRG	1 cut(s)	816
BmgBI	CACGTC	1 cut(s)	1276
BmgT120I	GGNCC	1 cut(s)	207
BmiI	GGNNCC	1 cut(s)	882
BmrFI	CCNGG	3 cut(s)	339, 885, 1609
BmsI	GCATC	3 cut(s)	157, 247, 416
BpmI	CTGGAG	4 cut(s)	321, 831, 960, 1544
BpuEI	CTTGAG	1 cut(s)	537
BsaAI	YACGTR	1 cut(s)	545
BsaBI	GATNNNNATC	2 cut(s)	987, 993
BsaI	GGTCTC	1 cut(s)	1538
BsaJI	CCNNGG	6 cut(s)	54, 210, 338, 1110, 1548, 1632
Bsc4I	CCNNNNNNNGG	2 cut(s)	338, 1614
Bse1I	ACTGG	1 cut(s)	966
Bse3DI	GCAATG	2 cut(s)	895, 928
Bse8I	GATNNNNATC	2 cut(s)	987, 993
BseBI	CCWGG	3 cut(s)	339, 885, 1609
BseDI	CCNNGG	6 cut(s)	54, 210, 338, 1110, 1548, 1632
BseGI	GGATG	9 cut(s)	10, 40, 172, 238, 407, 862, 1234, 1476, 1642
BseJI	GATNNNNATC	2 cut(s)	987, 993
BseLI	CCNNNNNNNGG	2 cut(s)	338, 1614
BseMI	GCAATG	2 cut(s)	895, 928
BseMII	CTCAG	3 cut(s)	450, 906, 1592
BseNI	ACTGG	1 cut(s)	966
BseRI	GAGGAG	2 cut(s)	32, 407
BseXI	GCAGC	3 cut(s)	622, 833, 1561
BseYI	CCCAGC	1 cut(s)	638
Bsh1285I	CGRYCG	1 cut(s)	1510
BshFI	GGCC	2 cut(s)	53, 1233
BsiEI	CGRYCG	1 cut(s)	1510
BsiHKAI	GWGCWC	2 cut(s)	817, 1567
BsiHKCI	CYCGRG	1 cut(s)	816
BslFI	GGGAC	1 cut(s)	1431
BslI	CCNNNNNNNGG	2 cut(s)	338, 1614
BsmAI	GTCTC	6 cut(s)	339, 378, 455, 554, 1178, 1538
BsmBI	CGTCTC	1 cut(s)	339
BsmFI	GGGAC	1 cut(s)	1431
BsmI	GAATGC	1 cut(s)	934
BsnI	GGCC	2 cut(s)	53, 1233
Bso31I	GGTCTC	1 cut(s)	1538
BsoBI	CYCGRG	1 cut(s)	816
Bsp1286I	GDGCHC	3 cut(s)	817, 883, 1567
Bsp143I	GATC	4 cut(s)	472, 982, 988, 994
BspACI	CCGC	2 cut(s)	521, 1399
BspANI	GGCC	2 cut(s)	53, 1233
BspCNI	CTCAG	3 cut(s)	451, 907, 1591
BspLI	GGNNCC	1 cut(s)	882
BspPI	GGATC	1 cut(s)	989
BspQI	GCTCTTC	1 cut(s)	138
BspTI	CTTAAG	1 cut(s)	377
BspTNI	GGTCTC	1 cut(s)	1538
BsrDI	GCAATG	2 cut(s)	895, 928
BsrI	ACTGG	1 cut(s)	966
BssECI	CCNNGG	6 cut(s)	54, 210, 338, 1110, 1548, 1632
BssMI	GATC	4 cut(s)	472, 982, 988, 994
BssSI	CACGAG	1 cut(s)	429
BssT1I	CCWWGG	5 cut(s)	54, 210, 1110, 1548, 1632
Bst2BI	CACGAG	1 cut(s)	429
Bst2UI	CCWGG	3 cut(s)	339, 885, 1609
Bst4CI	ACNGT	3 cut(s)	278, 1365, 1508
Bst6I	CTCTTC	2 cut(s)	138, 392
BstAFI	CTTAAG	1 cut(s)	377
BstAPI	GCANNNNNTGC	2 cut(s)	310, 1472
BstBAI	YACGTR	1 cut(s)	545
BstC8I	GCNNGC	5 cut(s)	315, 525, 1397, 1488, 1492
BstDEI	CTNAG	5 cut(s)	459, 478, 896, 915, 1578
BstEII	GGTNACC	1 cut(s)	1401
BstF5I	GGATG	9 cut(s)	10, 40, 172, 238, 407, 862, 1234, 1476, 1642
BstH2I	RGCGCY	2 cut(s)	1110, 1487
BstHHI	GCGC	3 cut(s)	577, 1109, 1486
BstKTI	GATC	4 cut(s)	475, 985, 991, 997
BstMAI	GTCTC	6 cut(s)	339, 378, 455, 554, 1178, 1538
BstMBI	GATC	4 cut(s)	472, 982, 988, 994
BstMCI	CGRYCG	1 cut(s)	1510
BstMWI	GCNNNNNNNGC	9 cut(s)	257, 310, 362, 413, 821, 1340, 1472, 1481, 1571
BstNI	CCWGG	3 cut(s)	339, 885, 1609
BstNSI	RCATGY	2 cut(s)	308, 730
BstPI	GGTNACC	1 cut(s)	1401
BstSCI	CCNGG	3 cut(s)	337, 883, 1607
BstV1I	GCAGC	3 cut(s)	622, 833, 1561
BsuRI	GGCC	2 cut(s)	53, 1233
BtrI	CACGTC	1 cut(s)	1276
BtsCI	GGATG	9 cut(s)	10, 40, 172, 238, 407, 862, 1234, 1476, 1642
BtsIMutI	CAGTG	2 cut(s)	456, 959
Cac8I	GCNNGC	5 cut(s)	315, 525, 1397, 1488, 1492
CaiI	CAGNNNCTG	1 cut(s)	344
CfoI	GCGC	3 cut(s)	577, 1109, 1486
Cfr13I	GGNCC	1 cut(s)	207
Csp6I	GTAC	4 cut(s)	542, 841, 1374, 1504
CviAII	CATG	6 cut(s)	305, 435, 671, 727, 1259, 1648
CviQI	GTAC	4 cut(s)	542, 841, 1374, 1504
DdeI	CTNAG	5 cut(s)	459, 478, 896, 915, 1578
DpnI	GATC	4 cut(s)	474, 984, 990, 996
DpnII	GATC	4 cut(s)	472, 982, 988, 994
DraI	TTTAAA	1 cut(s)	829
DraIII	CACNNNGTG	1 cut(s)	49
EaeI	YGGCCR	2 cut(s)	51, 1231
Eam1104I	CTCTTC	2 cut(s)	138, 392
EarI	CTCTTC	2 cut(s)	138, 392
Ecl136II	GAGCTC	2 cut(s)	815, 1565
Eco130I	CCWWGG	5 cut(s)	54, 210, 1110, 1548, 1632
Eco24I	GRGCYC	3 cut(s)	817, 883, 1567
Eco31I	GGTCTC	1 cut(s)	1538
Eco47I	GGWCC	1 cut(s)	207
Eco47III	AGCGCT	1 cut(s)	1485
Eco53kI	GAGCTC	2 cut(s)	815, 1565
Eco88I	CYCGRG	1 cut(s)	816
Eco91I	GGTNACC	1 cut(s)	1401
EcoICRI	GAGCTC	2 cut(s)	815, 1565
EcoO65I	GGTNACC	1 cut(s)	1401
EcoRII	CCWGG	3 cut(s)	337, 883, 1607
EcoT14I	CCWWGG	5 cut(s)	54, 210, 1110, 1548, 1632
EcoT38I	GRGCYC	3 cut(s)	817, 883, 1567
ErhI	CCWWGG	5 cut(s)	54, 210, 1110, 1548, 1632
Esp3I	CGTCTC	1 cut(s)	339
FaeI	CATG	6 cut(s)	308, 438, 674, 730, 1262, 1651
FalI	AAGNNNNNCTT	2 cut(s)	165, 197
FaqI	GGGAC	1 cut(s)	1431
FatI	CATG	6 cut(s)	304, 434, 670, 726, 1258, 1647
FauI	CCCGC	1 cut(s)	528
FauNDI	CATATG	2 cut(s)	697, 1378
FbaI	TGATCA	1 cut(s)	472
Fnu4HI	GCNGC	3 cut(s)	636, 822, 1575
FokI	GGATG	9 cut(s)	17, 47, 179, 225, 394, 869, 1241, 1463, 1649
FriOI	GRGCYC	3 cut(s)	817, 883, 1567
Fsp4HI	GCNGC	3 cut(s)	636, 822, 1575
FspBI	CTAG	2 cut(s)	417, 719
FspI	TGCGCA	1 cut(s)	576
GlaI	GCGC	3 cut(s)	576, 1108, 1485
GluI	GCNGC	3 cut(s)	636, 822, 1575
GsaI	CCCAGC	1 cut(s)	642
GsuI	CTGGAG	4 cut(s)	321, 831, 960, 1544
HaeII	RGCGCY	2 cut(s)	1110, 1487
HaeIII	GGCC	2 cut(s)	53, 1233
HhaI	GCGC	3 cut(s)	577, 1109, 1486
Hin1II	CATG	6 cut(s)	308, 438, 674, 730, 1262, 1651
Hin6I	GCGC	3 cut(s)	575, 1107, 1484
HinP1I	GCGC	3 cut(s)	575, 1107, 1484
HindIII	AAGCTT	2 cut(s)	363, 1393
HinfI	GANTC	9 cut(s)	38, 116, 202, 245, 350, 617, 1010, 1141, 1175
HphI	GGTGA	4 cut(s)	508, 662, 1126, 1553
Hpy166II	GTNNAC	3 cut(s)	716, 1211, 1584
Hpy188I	TCNGA	8 cut(s)	73, 115, 121, 412, 486, 709, 771, 1054
Hpy8I	GTNNAC	3 cut(s)	716, 1211, 1584
HpyAV	CCTTC	8 cut(s)	25, 97, 816, 962, 1081, 1288, 1532, 1612
HpyCH4III	ACNGT	3 cut(s)	278, 1365, 1508
HpyCH4IV	ACGT	2 cut(s)	544, 1275
HpyCH4V	TGCA	7 cut(s)	156, 170, 304, 1203, 1249, 1436, 1490
HpyF10VI	GCNNNNNNNGC	9 cut(s)	257, 310, 362, 413, 821, 1340, 1472, 1481, 1571
HpyF3I	CTNAG	5 cut(s)	459, 478, 896, 915, 1578
HpySE526I	ACGT	2 cut(s)	544, 1275
Hsp92II	CATG	6 cut(s)	308, 438, 674, 730, 1262, 1651
HspAI	GCGC	3 cut(s)	575, 1107, 1484
Ksp22I	TGATCA	1 cut(s)	472
Kzo9I	GATC	4 cut(s)	472, 982, 988, 994
LguI	GCTCTTC	1 cut(s)	138
LmnI	GCTCC	2 cut(s)	812, 886
Lsp1109I	GCAGC	3 cut(s)	622, 833, 1561
LweI	GCATC	3 cut(s)	157, 247, 416
MaeI	CTAG	2 cut(s)	417, 719
MaeII	ACGT	2 cut(s)	544, 1275
MaeIII	GTNAC	2 cut(s)	1011, 1401
MalI	GATC	4 cut(s)	474, 984, 990, 996
MboI	GATC	4 cut(s)	472, 982, 988, 994
MhlI	GDGCHC	3 cut(s)	817, 883, 1567
MlsI	TGGCCA	2 cut(s)	53, 1233
MluNI	TGGCCA	2 cut(s)	53, 1233
MlyI	GAGTC	2 cut(s)	1019, 1169
MmeI	TCCRAC	3 cut(s)	93, 120, 794
Mox20I	TGGCCA	2 cut(s)	53, 1233
MscI	TGGCCA	2 cut(s)	53, 1233
MseI	TTAA	4 cut(s)	378, 828, 1389, 1559
MslI	CAYNNNNRTG	2 cut(s)	433, 1257
Msp20I	TGGCCA	2 cut(s)	53, 1233
MspA1I	CMGCKG	2 cut(s)	467, 914
MspCI	CTTAAG	1 cut(s)	377
MspR9I	CCNGG	3 cut(s)	339, 885, 1609
Mva1269I	GAATGC	1 cut(s)	934
MvaI	CCWGG	3 cut(s)	339, 885, 1609
MwoI	GCNNNNNNNGC	9 cut(s)	257, 310, 362, 413, 821, 1340, 1472, 1481, 1571
NdeI	CATATG	2 cut(s)	697, 1378
NdeII	GATC	4 cut(s)	472, 982, 988, 994
NlaIII	CATG	6 cut(s)	308, 438, 674, 730, 1262, 1651
NlaIV	GGNNCC	1 cut(s)	882
NmuCI	GTSAC	1 cut(s)	1011
NsbI	TGCGCA	1 cut(s)	576
NspI	RCATGY	2 cut(s)	308, 730
PaeR7I	CTCGAG	1 cut(s)	816
PciI	ACATGT	1 cut(s)	726
PciSI	GCTCTTC	1 cut(s)	138
PctI	GAATGC	1 cut(s)	934
PfeI	GAWTC	7 cut(s)	38, 116, 202, 245, 350, 617, 1141
PfoI	TCCNGGA	1 cut(s)	1607
PkrI	GCNGC	3 cut(s)	637, 823, 1576
PleI	GAGTC	2 cut(s)	1018, 1169
PpsI	GAGTC	2 cut(s)	1018, 1169
Ppu21I	YACGTR	1 cut(s)	545
PscI	ACATGT	1 cut(s)	726
Psp124BI	GAGCTC	2 cut(s)	817, 1567
Psp6I	CCWGG	3 cut(s)	337, 883, 1607
PspEI	GGTNACC	1 cut(s)	1401
PspFI	CCCAGC	1 cut(s)	638
PspGI	CCWGG	3 cut(s)	337, 883, 1607
PspN4I	GGNNCC	1 cut(s)	882
PspPI	GGNCC	1 cut(s)	207
PspXI	VCTCGAGB	1 cut(s)	816
PstNI	CAGNNNCTG	1 cut(s)	344
PvuII	CAGCTG	2 cut(s)	467, 914
RsaI	GTAC	4 cut(s)	543, 842, 1375, 1505
RsaNI	GTAC	4 cut(s)	542, 841, 1374, 1504
RseI	CAYNNNNRTG	2 cut(s)	433, 1257
SacI	GAGCTC	2 cut(s)	817, 1567
SapI	GCTCTTC	1 cut(s)	138
SaqAI	TTAA	4 cut(s)	378, 828, 1389, 1559
SatI	GCNGC	3 cut(s)	636, 822, 1575
Sau3AI	GATC	4 cut(s)	472, 982, 988, 994
Sau96I	GGNCC	1 cut(s)	207
SchI	GAGTC	2 cut(s)	1019, 1169
ScrFI	CCNGG	3 cut(s)	339, 885, 1609
SduI	GDGCHC	3 cut(s)	817, 883, 1567
SfaNI	GCATC	3 cut(s)	157, 247, 416
Sfr274I	CTCGAG	1 cut(s)	816
SinI	GGWCC	1 cut(s)	207
SlaI	CTCGAG	1 cut(s)	816
SmiMI	CAYNNNNRTG	2 cut(s)	433, 1257
SmlI	CTYRAG	3 cut(s)	377, 552, 816
SmoI	CTYRAG	3 cut(s)	377, 552, 816
SsiI	CCGC	2 cut(s)	521, 1399
SspI	AATATT	1 cut(s)	1101
SspMI	CTAG	2 cut(s)	417, 719
SstI	GAGCTC	2 cut(s)	817, 1567
StyD4I	CCNGG	3 cut(s)	337, 883, 1607
StyI	CCWWGG	5 cut(s)	54, 210, 1110, 1548, 1632
TaaI	ACNGT	3 cut(s)	278, 1365, 1508
TaiI	ACGT	2 cut(s)	547, 1278
TaqI	TCGA	3 cut(s)	817, 1360, 1567
TaqII	GACCGA	1 cut(s)	195
TatI	WGTACW	1 cut(s)	1373
TfiI	GAWTC	7 cut(s)	38, 116, 202, 245, 350, 617, 1141
Tru1I	TTAA	4 cut(s)	378, 828, 1389, 1559
Tru9I	TTAA	4 cut(s)	378, 828, 1389, 1559
TscAI	CASTG	2 cut(s)	463, 966
TseFI	GTSAC	1 cut(s)	1011
TseI	GCWGC	3 cut(s)	635, 821, 1574
Tsp45I	GTSAC	1 cut(s)	1011
TspDTI	ATGAA	6 cut(s)	167, 215, 671, 939, 1653, 1664
TspRI	CASTG	2 cut(s)	463, 966
Vha464I	CTTAAG	1 cut(s)	377
VpaK11BI	GGWCC	1 cut(s)	207
XapI	RAATTY	6 cut(s)	158, 628, 737, 1033, 1169, 1652
XceI	RCATGY	2 cut(s)	308, 730
XcmI	CCANNNNNNNNNTGG	1 cut(s)	61
XhoI	CTCGAG	1 cut(s)	816
XspI	CTAG	2 cut(s)	417, 719

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.