presynapse organization
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G14980 AT3G14980 AT3G14980 AT3G14980 AT3G14980 AT3G14980 |
| fragaria_vesca | FvH4_3g18560 FvH4_3g18560 |
| malus_domestica | MD03G1241200.v1.1 MD11G1260600.v1.1 |
| prunus_persica | Prupe.4G167700_v2.0.a1 Prupe.4G167700_v2.0.a1 Prupe.4G167700_v2.0.a1 Prupe.4G167700_v2.0.a1 Prupe.4G167700_v2.0.a1 |
| pyrus_communis | pycom03g18780 pycom11g23000 |
| rosa_chinensis | RchiOBHm_Chr5g0031311 |
| rosa_laevigata | RLG00000033300 |
| rosa_multiflora | Rmu_co8157186.1_g000001 Rmu_sc0007782.1_g000017 |
| rosa_roxburghii | Rroxscaffold_1G00048980 |
| rosa_rugosa | Rorug05G0124000 Rorug05G0124100 Rorug05G0124200 |
| rosa_samantha | Rh5AG217300 Rh5BG217000 Rh5CG240600 Rh5DG222200 |
| rosa_wichuraiana | Rw5G019870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 410, 3045, 3407 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2178 |
| Acc36I | ACCTGC | 1 cut(s) | 1135 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 978 |
| AccBSI | CCGCTC | 1 cut(s) | 1328 |
| AciI | CCGC | 5 cut(s) | 898, 982, 1326, 1906, 2960 |
| AcsI | RAATTY | 3 cut(s) | 374, 2863, 3353 |
| AcuI | CTGAAG | 7 cut(s) | 285, 1407, 2433, 2600, 3360, 3798, 3879 |
| AcyI | GRCGYC | 1 cut(s) | 3007 |
| AdeI | CACNNNGTG | 2 cut(s) | 1337, 2516 |
| AfaI | GTAC | 7 cut(s) | 2133, 2488, 2565, 2834, 3367, 3495, 3693 |
| AfeI | AGCGCT | 1 cut(s) | 65 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 978, 2268, 2804, 2992, 3486 |
| AflIII | ACRYGT | 3 cut(s) | 2560, 3236, 3502 |
| AhlI | ACTAGT | 1 cut(s) | 236 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1567, 1599, 3765, 3797 |
| AleI | CACNNNNGTG | 1 cut(s) | 2279 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2561, 2593 |
| Alw21I | GWGCWC | 2 cut(s) | 1921, 3303 |
| Alw26I | GTCTC | 3 cut(s) | 2400, 2625, 3470 |
| Alw44I | GTGCAC | 1 cut(s) | 3299 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2144 |
| Aor51HI | AGCGCT | 1 cut(s) | 65 |
| AoxI | GGCC | 5 cut(s) | 165, 1050, 1272, 1903, 2214 |
| ApaLI | GTGCAC | 1 cut(s) | 3299 |
| ApeKI | GCWGC | 7 cut(s) | 544, 875, 1024, 2418, 3068, 3383, 3913 |
| ApoI | RAATTY | 3 cut(s) | 374, 2863, 3353 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 475, 507 |
| AseI | ATTAAT | 2 cut(s) | 956, 1113 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2778 |
| AspLEI | GCGC | 2 cut(s) | 66, 2274 |
| AspS9I | GGNCC | 4 cut(s) | 567, 707, 1050, 1996 |
| AsuII | TTCGAA | 1 cut(s) | 1526 |
| AvaII | GGWCC | 3 cut(s) | 567, 707, 1996 |
| BaeGI | GKGCMC | 1 cut(s) | 3303 |
| BamHI | GGATCC | 2 cut(s) | 50, 829 |
| BanII | GRGCYC | 1 cut(s) | 1921 |
| BbsI | GAAGAC | 1 cut(s) | 2606 |
| Bbv12I | GWGCWC | 2 cut(s) | 1921, 3303 |
| BbvCI | CCTCAGC | 1 cut(s) | 753 |
| BbvI | GCAGC | 7 cut(s) | 556, 862, 1011, 2430, 3055, 3370, 3925 |
| BceAI | ACGGC | 1 cut(s) | 2285 |
| BcoDI | GTCTC | 3 cut(s) | 2400, 2625, 3470 |
| BcuI | ACTAGT | 1 cut(s) | 236 |
| BfmI | CTRYAG | 7 cut(s) | 459, 876, 1025, 1478, 2399, 2883, 2916 |
| BfoI | RGCGCY | 1 cut(s) | 67 |
| BfuAI | ACCTGC | 1 cut(s) | 1135 |
| BglII | AGATCT | 4 cut(s) | 308, 794, 914, 1075 |
| BmcAI | AGTACT | 2 cut(s) | 2133, 2488 |
| Bme18I | GGWCC | 3 cut(s) | 567, 707, 1996 |
| BmgT120I | GGNCC | 4 cut(s) | 567, 707, 1050, 1996 |
| BmiI | GGNNCC | 5 cut(s) | 52, 568, 709, 831, 1572 |
| BmrI | ACTGGG | 2 cut(s) | 3342, 3429 |
| BmuI | ACTGGG | 2 cut(s) | 3342, 3429 |
| BpiI | GAAGAC | 1 cut(s) | 2606 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2591, 2623, 3725, 3757 |
| BpmI | CTGGAG | 5 cut(s) | 153, 830, 944, 1328, 3659 |
| Bpu10I | CCTNAGC | 1 cut(s) | 753 |
| Bpu14I | TTCGAA | 1 cut(s) | 1526 |
| BpuEI | CTTGAG | 3 cut(s) | 785, 2262, 3173 |
| BsaAI | YACGTR | 1 cut(s) | 2563 |
| BsaBI | GATNNNNATC | 1 cut(s) | 775 |
| BsaHI | GRCGYC | 1 cut(s) | 3007 |
| BsaI | GGTCTC | 1 cut(s) | 3470 |
| BsaJI | CCNNGG | 7 cut(s) | 290, 672, 1972, 2992, 3252, 3285, 3676 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 978, 2268, 2804, 2992, 3486 |
| Bse3DI | GCAATG | 4 cut(s) | 1613, 1948, 3736, 3793 |
| Bse8I | GATNNNNATC | 1 cut(s) | 775 |
| BseDI | CCNNGG | 7 cut(s) | 290, 672, 1972, 2992, 3252, 3285, 3676 |
| BseGI | GGATG | 9 cut(s) | 416, 887, 2013, 2041, 2679, 2921, 3226, 3248, 3622 |
| BseJI | GATNNNNATC | 1 cut(s) | 775 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 978, 2268, 2804, 2992, 3486 |
| BseMI | GCAATG | 4 cut(s) | 1613, 1948, 3736, 3793 |
| BseMII | CTCAG | 7 cut(s) | 22, 51, 744, 1199, 1416, 2136, 2622 |
| BseRI | GAGGAG | 3 cut(s) | 260, 732, 1705 |
| BseSI | GKGCMC | 1 cut(s) | 3303 |
| BseXI | GCAGC | 7 cut(s) | 556, 862, 1011, 2430, 3055, 3370, 3925 |
| BseYI | CCCAGC | 4 cut(s) | 1441, 1465, 1719, 2018 |
| BsgI | GTGCAG | 1 cut(s) | 619 |
| BshFI | GGCC | 5 cut(s) | 167, 1052, 1274, 1905, 2216 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1921, 3303 |
| BslFI | GGGAC | 6 cut(s) | 580, 655, 693, 1728, 3103, 3267 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 978, 2268, 2804, 2992, 3486 |
| BsmAI | GTCTC | 3 cut(s) | 2400, 2625, 3470 |
| BsmFI | GGGAC | 6 cut(s) | 580, 655, 693, 1728, 3103, 3267 |
| BsmI | GAATGC | 1 cut(s) | 2738 |
| BsnI | GGCC | 5 cut(s) | 167, 1052, 1274, 1905, 2216 |
| Bso31I | GGTCTC | 1 cut(s) | 3470 |
| Bsp119I | TTCGAA | 1 cut(s) | 1526 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1921, 3303 |
| Bsp1407I | TGTACA | 3 cut(s) | 2832, 3493, 3691 |
| Bsp19I | CCATGG | 1 cut(s) | 3285 |
| BspACI | CCGC | 5 cut(s) | 898, 982, 1326, 1906, 2960 |
| BspANI | GGCC | 5 cut(s) | 167, 1052, 1274, 1905, 2216 |
| BspCNI | CTCAG | 7 cut(s) | 21, 52, 745, 1200, 1417, 2137, 2621 |
| BspHI | TCATGA | 1 cut(s) | 2530 |
| BspLI | GGNNCC | 5 cut(s) | 52, 568, 709, 831, 1572 |
| BspMAI | CTGCAG | 5 cut(s) | 880, 1029, 1482, 2403, 2887 |
| BspMI | ACCTGC | 1 cut(s) | 1135 |
| BspT104I | TTCGAA | 1 cut(s) | 1526 |
| BspTNI | GGTCTC | 1 cut(s) | 3470 |
| BsrBI | CCGCTC | 1 cut(s) | 1328 |
| BsrDI | GCAATG | 4 cut(s) | 1613, 1948, 3736, 3793 |
| BsrGI | TGTACA | 3 cut(s) | 2832, 3493, 3691 |
| BssECI | CCNNGG | 7 cut(s) | 290, 672, 1972, 2992, 3252, 3285, 3676 |
| BssNI | GRCGYC | 1 cut(s) | 3007 |
| BssT1I | CCWWGG | 2 cut(s) | 3252, 3285 |
| Bst6I | CTCTTC | 2 cut(s) | 190, 3021 |
| BstACI | GRCGYC | 1 cut(s) | 3007 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2121 |
| BstAUI | TGTACA | 3 cut(s) | 2832, 3493, 3691 |
| BstBAI | YACGTR | 1 cut(s) | 2563 |
| BstBI | TTCGAA | 1 cut(s) | 1526 |
| BstC8I | GCNNGC | 6 cut(s) | 549, 2231, 2289, 2345, 3828, 3832 |
| BstDSI | CCRYGG | 1 cut(s) | 3285 |
| BstEII | GGTNACC | 2 cut(s) | 1625, 1655 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2802 |
| BstF5I | GGATG | 9 cut(s) | 416, 887, 2013, 2041, 2679, 2921, 3226, 3248, 3622 |
| BstH2I | RGCGCY | 1 cut(s) | 67 |
| BstHHI | GCGC | 2 cut(s) | 66, 2274 |
| BstMAI | GTCTC | 3 cut(s) | 2400, 2625, 3470 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 797, 2121, 2246, 2427, 2436, 2726, 3836 |
| BstNSI | RCATGY | 4 cut(s) | 1727, 2541, 3240, 3506 |
| BstPI | GGTNACC | 2 cut(s) | 1625, 1655 |
| BstSFI | CTRYAG | 7 cut(s) | 459, 876, 1025, 1478, 2399, 2883, 2916 |
| BstSLI | GKGCMC | 1 cut(s) | 3303 |
| BstV1I | GCAGC | 7 cut(s) | 556, 862, 1011, 2430, 3055, 3370, 3925 |
| BstV2I | GAAGAC | 1 cut(s) | 2606 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 697 |
| BsuRI | GGCC | 5 cut(s) | 167, 1052, 1274, 1905, 2216 |
| BtgI | CCRYGG | 1 cut(s) | 3285 |
| BtsCI | GGATG | 9 cut(s) | 416, 887, 2013, 2041, 2679, 2921, 3226, 3248, 3622 |
| BtsI | GCAGTG | 2 cut(s) | 2131, 2880 |
| BveI | ACCTGC | 1 cut(s) | 1135 |
| Cac8I | GCNNGC | 6 cut(s) | 549, 2231, 2289, 2345, 3828, 3832 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2144 |
| CciI | TCATGA | 1 cut(s) | 2530 |
| CfoI | GCGC | 2 cut(s) | 66, 2274 |
| Cfr13I | GGNCC | 4 cut(s) | 567, 707, 1050, 1996 |
| CseI | GACGC | 1 cut(s) | 3015 |
| CsiI | ACCWGGT | 1 cut(s) | 391 |
| Csp6I | GTAC | 7 cut(s) | 2132, 2487, 2564, 2833, 3366, 3494, 3692 |
| CviQI | GTAC | 7 cut(s) | 2132, 2487, 2564, 2833, 3366, 3494, 3692 |
| DraI | TTTAAA | 2 cut(s) | 2190, 2503 |
| DraIII | CACNNNGTG | 2 cut(s) | 1337, 2516 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2178 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2178 |
| Eam1104I | CTCTTC | 2 cut(s) | 190, 3021 |
| EarI | CTCTTC | 2 cut(s) | 190, 3021 |
| EciI | GGCGGA | 1 cut(s) | 913 |
| Ecl136II | GAGCTC | 1 cut(s) | 1919 |
| Eco130I | CCWWGG | 2 cut(s) | 3252, 3285 |
| Eco147I | AGGCCT | 1 cut(s) | 2216 |
| Eco24I | GRGCYC | 1 cut(s) | 1921 |
| Eco31I | GGTCTC | 1 cut(s) | 3470 |
| Eco32I | GATATC | 3 cut(s) | 1057, 1560, 2913 |
| Eco47I | GGWCC | 3 cut(s) | 567, 707, 1996 |
| Eco47III | AGCGCT | 1 cut(s) | 65 |
| Eco53kI | GAGCTC | 1 cut(s) | 1919 |
| Eco57I | CTGAAG | 7 cut(s) | 285, 1407, 2433, 2600, 3360, 3798, 3879 |
| Eco91I | GGTNACC | 2 cut(s) | 1625, 1655 |
| EcoICRI | GAGCTC | 1 cut(s) | 1919 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2802 |
| EcoO65I | GGTNACC | 2 cut(s) | 1625, 1655 |
| EcoRV | GATATC | 3 cut(s) | 1057, 1560, 2913 |
| EcoT14I | CCWWGG | 2 cut(s) | 3252, 3285 |
| EcoT22I | ATGCAT | 3 cut(s) | 1411, 1613, 2681 |
| EcoT38I | GRGCYC | 1 cut(s) | 1921 |
| ErhI | CCWWGG | 2 cut(s) | 3252, 3285 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3128, 3160 |
| FaqI | GGGAC | 6 cut(s) | 580, 655, 693, 1728, 3103, 3267 |
| FokI | GGATG | 9 cut(s) | 403, 894, 2020, 2048, 2666, 2908, 3213, 3235, 3629 |
| FriOI | GRGCYC | 1 cut(s) | 1921 |
| GlaI | GCGC | 2 cut(s) | 65, 2273 |
| GsaI | CCCAGC | 4 cut(s) | 1445, 1469, 1723, 2022 |
| GsuI | CTGGAG | 5 cut(s) | 153, 830, 944, 1328, 3659 |
| HaeII | RGCGCY | 1 cut(s) | 67 |
| HaeIII | GGCC | 5 cut(s) | 167, 1052, 1274, 1905, 2216 |
| HgaI | GACGC | 1 cut(s) | 3015 |
| HhaI | GCGC | 2 cut(s) | 66, 2274 |
| Hin1I | GRCGYC | 1 cut(s) | 3007 |
| Hin6I | GCGC | 2 cut(s) | 64, 2272 |
| HinP1I | GCGC | 2 cut(s) | 64, 2272 |
| HindIII | AAGCTT | 5 cut(s) | 975, 1928, 2776, 3056, 3142 |
| Hpy166II | GTNNAC | 6 cut(s) | 839, 995, 2324, 2510, 2605, 3301 |
| Hpy8I | GTNNAC | 6 cut(s) | 839, 995, 2324, 2510, 2605, 3301 |
| Hpy99I | CGWCG | 2 cut(s) | 2991, 3009 |
| HpyCH4IV | ACGT | 3 cut(s) | 907, 2562, 3280 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 797, 2121, 2246, 2427, 2436, 2726, 3836 |
| HpySE526I | ACGT | 3 cut(s) | 907, 2562, 3280 |
| Hsp92I | GRCGYC | 1 cut(s) | 3007 |
| HspAI | GCGC | 2 cut(s) | 64, 2272 |
| LmnI | GCTCC | 3 cut(s) | 1333, 1583, 2404 |
| Lsp1109I | GCAGC | 7 cut(s) | 556, 862, 1011, 2430, 3055, 3370, 3925 |
| MabI | ACCWGGT | 1 cut(s) | 391 |
| MaeII | ACGT | 3 cut(s) | 907, 2562, 3280 |
| MbiI | CCGCTC | 1 cut(s) | 1328 |
| MfeI | CAATTG | 3 cut(s) | 204, 859, 3611 |
| MhlI | GDGCHC | 2 cut(s) | 1921, 3303 |
| MlyI | GAGTC | 9 cut(s) | 164, 218, 458, 575, 812, 935, 3707, 3734, 3743 |
| MmeI | TCCRAC | 2 cut(s) | 2426, 3681 |
| Mph1103I | ATGCAT | 3 cut(s) | 1411, 1613, 2681 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2778 |
| MslI | CAYNNNNRTG | 7 cut(s) | 36, 1807, 2279, 2813, 3306, 3855, 3994 |
| MspA1I | CMGCKG | 2 cut(s) | 2421, 3916 |
| MunI | CAATTG | 3 cut(s) | 204, 859, 3611 |
| Mva1269I | GAATGC | 1 cut(s) | 2738 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 797, 2121, 2246, 2427, 2436, 2726, 3836 |
| NcoI | CCATGG | 1 cut(s) | 3285 |
| NlaIV | GGNNCC | 5 cut(s) | 52, 568, 709, 831, 1572 |
| NmuCI | GTSAC | 8 cut(s) | 95, 127, 481, 578, 715, 962, 1655, 2464 |
| NsiI | ATGCAT | 3 cut(s) | 1411, 1613, 2681 |
| NspI | RCATGY | 4 cut(s) | 1727, 2541, 3240, 3506 |
| NspV | TTCGAA | 1 cut(s) | 1526 |
| OliI | CACNNNNGTG | 1 cut(s) | 2279 |
| PagI | TCATGA | 1 cut(s) | 2530 |
| PceI | AGGCCT | 1 cut(s) | 2216 |
| PciI | ACATGT | 2 cut(s) | 3236, 3502 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1050 |
| PctI | GAATGC | 1 cut(s) | 2738 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2778 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 978 |
| PfoI | TCCNGGA | 3 cut(s) | 2261, 3172, 3229 |
| PleI | GAGTC | 9 cut(s) | 163, 218, 458, 575, 812, 934, 3706, 3734, 3742 |
| PpsI | GAGTC | 9 cut(s) | 163, 218, 458, 575, 812, 934, 3706, 3734, 3742 |
| Ppu21I | YACGTR | 1 cut(s) | 2563 |
| PscI | ACATGT | 2 cut(s) | 3236, 3502 |
| PshBI | ATTAAT | 2 cut(s) | 956, 1113 |
| PsiI | TTATAA | 3 cut(s) | 410, 3045, 3407 |
| Psp124BI | GAGCTC | 1 cut(s) | 1921 |
| PspEI | GGTNACC | 2 cut(s) | 1625, 1655 |
| PspFI | CCCAGC | 4 cut(s) | 1441, 1465, 1719, 2018 |
| PspN4I | GGNNCC | 5 cut(s) | 52, 568, 709, 831, 1572 |
| PspPI | GGNCC | 4 cut(s) | 567, 707, 1050, 1996 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 439, 471, 3226, 3258 |
| PstI | CTGCAG | 5 cut(s) | 880, 1029, 1482, 2403, 2887 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2144 |
| PvuII | CAGCTG | 2 cut(s) | 2421, 3916 |
| RsaI | GTAC | 7 cut(s) | 2133, 2488, 2565, 2834, 3367, 3495, 3693 |
| RsaNI | GTAC | 7 cut(s) | 2132, 2487, 2564, 2833, 3366, 3494, 3692 |
| RseI | CAYNNNNRTG | 7 cut(s) | 36, 1807, 2279, 2813, 3306, 3855, 3994 |
| SacI | GAGCTC | 1 cut(s) | 1921 |
| Sau96I | GGNCC | 4 cut(s) | 567, 707, 1050, 1996 |
| ScaI | AGTACT | 2 cut(s) | 2133, 2488 |
| SchI | GAGTC | 9 cut(s) | 164, 218, 458, 575, 812, 935, 3707, 3734, 3743 |
| SduI | GDGCHC | 2 cut(s) | 1921, 3303 |
| SexAI | ACCWGGT | 1 cut(s) | 391 |
| SfcI | CTRYAG | 7 cut(s) | 459, 876, 1025, 1478, 2399, 2883, 2916 |
| SfuI | TTCGAA | 1 cut(s) | 1526 |
| SinI | GGWCC | 3 cut(s) | 567, 707, 1996 |
| SmiI | ATTTAAAT | 1 cut(s) | 2503 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 36, 1807, 2279, 2813, 3306, 3855, 3994 |
| SmlI | CTYRAG | 3 cut(s) | 764, 2277, 3188 |
| SmoI | CTYRAG | 3 cut(s) | 764, 2277, 3188 |
| SpeI | ACTAGT | 1 cut(s) | 236 |
| SseBI | AGGCCT | 1 cut(s) | 2216 |
| SsiI | CCGC | 5 cut(s) | 898, 982, 1326, 1906, 2960 |
| SspI | AATATT | 1 cut(s) | 1597 |
| SstI | GAGCTC | 1 cut(s) | 1921 |
| StuI | AGGCCT | 1 cut(s) | 2216 |
| StyI | CCWWGG | 2 cut(s) | 3252, 3285 |
| SwaI | ATTTAAAT | 1 cut(s) | 2503 |
| TaiI | ACGT | 3 cut(s) | 910, 2565, 3283 |
| TaqI | TCGA | 4 cut(s) | 870, 1526, 1882, 2980 |
| TatI | WGTACW | 5 cut(s) | 2131, 2486, 2832, 3493, 3691 |
| TauI | GCSGC | 3 cut(s) | 985, 1908, 2962 |
| TseFI | GTSAC | 8 cut(s) | 95, 127, 481, 578, 715, 962, 1655, 2464 |
| TseI | GCWGC | 7 cut(s) | 544, 875, 1024, 2418, 3068, 3383, 3913 |
| Tsp45I | GTSAC | 8 cut(s) | 95, 127, 481, 578, 715, 962, 1655, 2464 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 978 |
| VneI | GTGCAC | 1 cut(s) | 3299 |
| VpaK11BI | GGWCC | 3 cut(s) | 567, 707, 1996 |
| VspI | ATTAAT | 2 cut(s) | 956, 1113 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2802 |
| XapI | RAATTY | 3 cut(s) | 374, 2863, 3353 |
| XbaI | TCTAGA | 6 cut(s) | 272, 1586, 1805, 1892, 1913, 3743 |
| XceI | RCATGY | 4 cut(s) | 1727, 2541, 3240, 3506 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1727, 2563, 3079 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2778 |
| ZrmI | AGTACT | 2 cut(s) | 2133, 2488 |
| Zsp2I | ATGCAT | 3 cut(s) | 1411, 1613, 2681 |