Rmu_sc0007782.1_g000017

presynapse organization

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007782.1
OG0005139
Physical Location & Seq
Forward (+)
75287 .. 85903
10617 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007782.1_g000017.1.cds

Sequence Viewer

Length: 3681 bp
atgaagttttcagttgatgaacttcctagtgcaaaacctggtttaggaaaggtaatagatttgtccatagtttcaaaagaaatggtttctggcttgtctgttactacagactccattactgaaacagtgacatttcgtttggtcgagtcttcgagtgaaggagttacatctagttgctatctgttaaagcagcctgcaaaacttgacagaggggccatagtaggtgactatgacgtttcaaagtgcagattaccaacttctgatgggaatgatggaaaggaactatgtgcaagtaaagctgttgcttcacctgtttcccaggagagcttctcaaccatgcttttggctacaggttcccctgtcactctattggataagttgggaacttcgctaggtgctgagggaaaacccgaggggttggatagatctgctattgccttcaagaaagactctagtaaggatcctcgtccgcttctccagtatgatgtcaatcgcttacttgaagctgcaggatggcatattcagaggcggaaaagacctagtagagcttatatggagtctgtttatgtaacaccaaaaggaaggttaattcgtgacttccccaaagcttggcggttgtgtggtgaacttttgtttgcagataggtgcagttcgctgcagagagatgatgcaaaggaatggtccaatattaatcagttttggtcagatctatctggtgctttagtaaattttgagaaagagatgaatcaaccagaacctgctactgaattggcttattggtggaggctcttagatccctttgtgattgttgtgtttattgagagaaagattcttgctctgagaaaaggagagactgttaaagcaactcaaagtttagctattaatactaatcataaggttttggccttgactaatgcgaatagtatcaaaaatcatctggagaaggaagatgtttctgctcccctctgtgatacaactctggcaggagggagtggatcggcagtttctgaggggaatgttatggaagatgtatcggtggtttgttctgaggaaagagatgaactgctgggaggcatgacttacgataggctgggagataatctgcaggggtctctggagtaccaaataaaatgcacaagtaatgttgttttgaaaaagaaaataagaaggaagtgtaaaaagatttctgaaatggaaccaagctccacttctagtaataatattggtttgcaatgcattgatgtcagtggtaaccagtcaaagatgaaagaggtcgatggcgaccttgcaggcaataaaagaagtaaaggaagttgcaagaagtcctcatctctcaactcctcccagcatgtggttggtgaaaaaagcccaaagtctgtgaaaaatgttagtgaatatgatgattttaaaactggaaagaagaaaccatctcgatgtgaaatcaaagatgatgacttactggtttcagctatcataaagaacacagattttagtgcaagtcctggtagatgttcttctagaaagaaaggctgcaaatctagagctcataggaagcataaaagtcaaaagagccattgcaagttgcttcttagaagcctgggtagtgtaggagtaaaaacagttctgtcttggatgcttgatgctggggtcatatttctggatgatgtgatccagtatcggaatactaaggatggttctgttattaaagatggtctagttaccagggatggtattttttgcaagtgttgcagtgaagtacttacagtttctgagttcaagattcatggtgggttcagactaaaccgtccatgtttaaatctttttctggaatctggtaaggccttctccttatgccagcttcaagcctggtcagctgaatacaagtccaggaaacggcggactcaagtggtgcgagctgatgaaaatgatgaaaatgatgattcttgcggactttgtggtgaagggggcgagctgatatgctgtgataactgcccctctacttttcatcaggcttgtttgtctctgcaggagcttcctgaaggcagctggtattgtccaaattgcacctgttggatatgtggtcattttgttaccgacaaaggggcttcaagtgcttctgatggatttaaatgttcgcagtgtgagcataaatacatggtaactgatattgtgtacaatggtgaagatgatcatgaggcttgtctgaaagaaaaatccatacatgtactggattcttggttctgtgaaagaagctgtcaagaggtttactcaggtcttcagtctcatgttggctacattaatcatgttgtcgatggcttttcatggacacttcttagatgcattcgtgatgaccaaaaagttcattctgcccaacggttatcactgaaagcagaatgcaatacaagattagctgttgctcttactgtcatggaagaaagctttctgtctatggtggatcctagaacaggcatagacatgataccccaagttttatacagttgggggtcagagtttgctcgtttgaattttcaaggcttctacactgcagtcttagagaaagatgatgtgctgatatctgtagcatccatcagggtgcatggaacaacagttgcagagatgccactcattgcaacttgcagtcgataccgtcgccagggaatgtgccgacgccttctgactgctattgaagagatgctgatatcatttaaggtggaaaagcttgtaatagctgccattccagatttggtggggacatggaccaagggttttggctttatacctgtggaagacagagaaaagcaaagcttgaacaagatcaatttgatggtttttcctggaacggttttactcaagaagcaattgtgtgaaaataaaacagcatatagacatcctggaacatgtcatacatcatccttggaaacgggaggattgagaaaagaatgttgttctgaagaagagcccatggttgagtttgggcactgtgatgatactagtggaaacaaaactggtgctgaagcaggaattgattttgtagaaggtactaatttagaagaatgtgatgatggtagtaaattatttattactgctgatactggaccagttggtacatcagaaggaaaaaacaaagcaactgaggtaggtattcaatccagagatgccattgttgggtttgtacagcgaaatgttgtccagtgttctgctaacaaagctggtgctgaaatggaaattaaaagcaagaagtcggtggaatctgaatcgtatgctgaagctggtattaaggctgtaaagcaatcggatgggatatgtcatgcggacatagttgctgatgcagttagacttgaagtcgagaatttccaggaatttgaagctgtagagcaatcaaaaacctgttgccagattgaagtaggcaatgaatcagaaataaggcagatgaccggcaaggatatgctggaatctgaagtcggcggggaaccagaaggtagagtttttgaaagcaatcttatgcaagtagtgggtgaagccaaaacaagtactttgcaggagcaatttttaaagctgtcttgtgaagaaccagcttcagcagtagaaaatagcaagccggaaacggtcactaatgttgttgaatcctcggaaatgtatgatgaaacacagctttccctggatgaacaatcgcaaaaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0000122 GO:0000228 GO:0000785 GO:0000790 GO:0001085 GO:0001103 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0004402 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0005911 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0008080 GO:0008134 GO:0008150 GO:0008152 GO:0009506 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010385 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0015630 GO:0016043 GO:0016070 GO:0016407 GO:0016410 GO:0016458 GO:0016569 GO:0016570 GO:0016573 GO:0016581 GO:0016740 GO:0016746 GO:0016747 GO:0017053 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0030054 GO:0031047 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0032993 GO:0034212 GO:0034641 GO:0036211 GO:0042393 GO:0042826 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043543 GO:0043966 GO:0043971 GO:0043972 GO:0044030 GO:0044154 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044728 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050808 GO:0051052 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0055044 GO:0060255 GO:0061733 GO:0065007 GO:0070013 GO:0070491 GO:0070603 GO:0071704 GO:0071840 GO:0072553 GO:0080090 GO:0080188 GO:0090304 GO:0090545 GO:0090568 GO:0097159 GO:0099172 GO:1901360 GO:1901363 GO:1901564 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1904949 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Jas PHD

Protein Analysis

1226

Amino Acids

135.1

Weight (kDa)

5.69

Isoelectric Point (pI)

40.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1803
Acc36I ACCTGC 1 cut(s) 766
AccB7I CCANNNNNTGG 2 cut(s) 609, 1351
AciI CCGC 7 cut(s) 470, 529, 613, 1897, 1947, 3311, 3465
AclWI GGATC 7 cut(s) 455, 468, 788, 1003, 1663, 2450, 2463
AcsI RAATTY 4 cut(s) 727, 2524, 3349, 3359
AcuI CTGAAG 7 cut(s) 2058, 2261, 2970, 3033, 3285, 3477, 3561
AcyI GRCGYC 1 cut(s) 2668
AfaI GTAC 8 cut(s) 1121, 1758, 2174, 2226, 3040, 3106, 3174, 3532
AfiI CCNNNNNNNGG 8 cut(s) 44, 609, 1351, 1893, 2100, 2465, 2653, 3165
AflIII ACRYGT 2 cut(s) 2221, 2897
AhdI GACNNNNNGTC 1 cut(s) 3341
AhlI ACTAGT 1 cut(s) 2990
AjuI GAANNNNNNNTTGG 2 cut(s) 1192, 1224
AloI GAACNNNNNNTCC 2 cut(s) 2222, 2254
Alw21I GWGCWC 1 cut(s) 1546
Alw26I GTCTC 4 cut(s) 845, 1116, 2025, 2286
AlwI GGATC 7 cut(s) 455, 468, 788, 1003, 1663, 2450, 2463
AlwNI CAGNNNCTG 3 cut(s) 758, 1007, 1769
Ama87I CYCGRG 1 cut(s) 410
AoxI GGCC 3 cut(s) 213, 903, 1839
ApeKI GCWGC 6 cut(s) 190, 506, 655, 1530, 2043, 2729
ApoI RAATTY 4 cut(s) 727, 2524, 3349, 3359
ArsI GACNNNNNNTTYG 4 cut(s) 121, 153, 665, 697
AseI ATTAAT 3 cut(s) 690, 882, 2298
Asp700I GAANNNNTTC 1 cut(s) 2439
AspS9I GGNCC 4 cut(s) 213, 681, 2757, 3095
AsuHPI GGTGA 7 cut(s) 236, 300, 635, 1370, 1970, 2192, 3527
AvaI CYCGRG 1 cut(s) 410
AvaII GGWCC 3 cut(s) 681, 2757, 3095
BaeGI GKGCMC 1 cut(s) 2979
BamHI GGATCC 2 cut(s) 460, 2455
BanII GRGCYC 2 cut(s) 1546, 2961
BarI GAAGNNNNNNTAC 2 cut(s) 1498, 1530
BbsI GAAGAC 3 cut(s) 141, 2267, 2793
Bbv12I GWGCWC 1 cut(s) 1546
BbvCI CCTCAGC 1 cut(s) 399
BbvI GCAGC 6 cut(s) 202, 493, 642, 1517, 2055, 2716
BceAI ACGGC 1 cut(s) 1910
BclI TGATCA 1 cut(s) 2188
BcoDI GTCTC 4 cut(s) 845, 1116, 2025, 2286
BcuI ACTAGT 1 cut(s) 2990
BfmI CTRYAG 9 cut(s) 105, 348, 507, 656, 1103, 2024, 2544, 2577, 3369
BfuAI ACCTGC 1 cut(s) 766
BglII AGATCT 2 cut(s) 425, 706
BisI GCNGC 6 cut(s) 191, 507, 656, 1531, 2044, 2730
BlsI GCNGC 6 cut(s) 192, 508, 657, 1532, 2045, 2731
BmcAI AGTACT 2 cut(s) 1758, 3532
Bme18I GGWCC 3 cut(s) 681, 2757, 3095
BmeRI GACNNNNNGTC 1 cut(s) 3341
BmeT110I CYCGRG 1 cut(s) 410
BmgT120I GGNCC 4 cut(s) 213, 681, 2757, 3095
BmiI GGNNCC 6 cut(s) 214, 355, 462, 1197, 2457, 3471
BmsI GCATC 9 cut(s) 658, 1623, 1630, 2327, 2591, 2607, 2682, 3145, 3316
BpiI GAAGAC 3 cut(s) 141, 2267, 2793
BplI GAGNNNNNCTC 4 cut(s) 314, 346, 2252, 2284
BpmI CTGGAG 3 cut(s) 461, 959, 1136
Bpu10I CCTNAGC 1 cut(s) 399
BpuEI CTTGAG 2 cut(s) 1887, 2834
BsaBI GATNNNNATC 1 cut(s) 489
BsaHI GRCGYC 1 cut(s) 2668
BsaI GGTCTC 1 cut(s) 1116
BsaXI ACNNNNNCTCC 2 cut(s) 840, 870
Bsc4I CCNNNNNNNGG 8 cut(s) 44, 609, 1351, 1893, 2100, 2465, 2653, 3165
Bse118I RCCGGY 1 cut(s) 3434
Bse3DI GCAATG 4 cut(s) 1238, 1573, 2625, 3415
Bse8I GATNNNNATC 1 cut(s) 489
BseJI GATNNNNATC 1 cut(s) 489
BseLI CCNNNNNNNGG 8 cut(s) 44, 609, 1351, 1893, 2100, 2465, 2653, 3165
BseMI GCAATG 4 cut(s) 1238, 1573, 2625, 3415
BseMII CTCAG 7 cut(s) 390, 830, 999, 1038, 1761, 2283, 3123
BseRI GAGGAG 1 cut(s) 1330
BseSI GKGCMC 1 cut(s) 2979
BseXI GCAGC 6 cut(s) 202, 493, 642, 1517, 2055, 2716
BseYI CCCAGC 4 cut(s) 1066, 1090, 1344, 1643
BsgI GTGCAG 2 cut(s) 265, 667
BshFI GGCC 3 cut(s) 215, 905, 1841
BsiHKAI GWGCWC 1 cut(s) 1546
BsiHKCI CYCGRG 1 cut(s) 410
BsiSI CCGG 2 cut(s) 3435, 3599
BslFI GGGAC 1 cut(s) 2764
BslI CCNNNNNNNGG 8 cut(s) 44, 609, 1351, 1893, 2100, 2465, 2653, 3165
BsmAI GTCTC 4 cut(s) 845, 1116, 2025, 2286
BsmFI GGGAC 1 cut(s) 2764
BsmI GAATGC 2 cut(s) 2340, 2399
BsnI GGCC 3 cut(s) 215, 905, 1841
Bso31I GGTCTC 1 cut(s) 1116
BsoBI CYCGRG 1 cut(s) 410
Bsp1286I GDGCHC 3 cut(s) 1546, 2961, 2979
Bsp1407I TGTACA 2 cut(s) 2172, 3172
Bsp143I GATC 9 cut(s) 425, 460, 706, 793, 995, 1668, 2188, 2455, 2814
Bsp19I CCATGG 1 cut(s) 2961
BspACI CCGC 7 cut(s) 470, 529, 613, 1897, 1947, 3311, 3465
BspANI GGCC 3 cut(s) 215, 905, 1841
BspCNI CTCAG 7 cut(s) 391, 831, 1000, 1039, 1762, 2282, 3124
BspHI TCATGA 1 cut(s) 2191
BspLI GGNNCC 6 cut(s) 214, 355, 462, 1197, 2457, 3471
BspMAI CTGCAG 5 cut(s) 511, 660, 1107, 2028, 2548
BspMI ACCTGC 1 cut(s) 766
BspPI GGATC 7 cut(s) 455, 468, 788, 1003, 1663, 2450, 2463
BspQI GCTCTTC 1 cut(s) 2949
BspTNI GGTCTC 1 cut(s) 1116
BsrDI GCAATG 4 cut(s) 1238, 1573, 2625, 3415
BsrFI RCCGGY 1 cut(s) 3434
BsrGI TGTACA 2 cut(s) 2172, 3172
BssAI RCCGGY 1 cut(s) 3434
BssMI GATC 9 cut(s) 425, 460, 706, 793, 995, 1668, 2188, 2455, 2814
BssNI GRCGYC 1 cut(s) 2668
BssT1I CCWWGG 3 cut(s) 2760, 2913, 2961
Bst6I CTCTTC 2 cut(s) 2682, 2949
BstACI GRCGYC 1 cut(s) 2668
BstAPI GCANNNNNTGC 1 cut(s) 1746
BstAUI TGTACA 2 cut(s) 2172, 3172
BstC8I GCNNGC 6 cut(s) 195, 1291, 1856, 1914, 1970, 3596
BstDSI CCRYGG 1 cut(s) 2961
BstEII GGTNACC 1 cut(s) 1250
BstENI CCTNNNNNAGG 2 cut(s) 42, 2463
BstKTI GATC 9 cut(s) 428, 463, 709, 796, 998, 1671, 2191, 2458, 2817
BstMAI GTCTC 4 cut(s) 845, 1116, 2025, 2286
BstMBI GATC 9 cut(s) 425, 460, 706, 793, 995, 1668, 2188, 2455, 2814
BstMWI GCNNNNNNNGC 6 cut(s) 296, 1746, 1871, 2111, 2143, 3206
BstNSI RCATGY 3 cut(s) 1352, 2225, 2901
BstPI GGTNACC 1 cut(s) 1250
BstSFI CTRYAG 9 cut(s) 105, 348, 507, 656, 1103, 2024, 2544, 2577, 3369
BstSLI GKGCMC 1 cut(s) 2979
BstV1I GCAGC 6 cut(s) 202, 493, 642, 1517, 2055, 2716
BstV2I GAAGAC 3 cut(s) 141, 2267, 2793
BstX2I RGATCY 5 cut(s) 425, 460, 706, 793, 2455
BstXI CCANNNNNNTGG 1 cut(s) 343
BstYI RGATCY 5 cut(s) 425, 460, 706, 793, 2455
BsuRI GGCC 3 cut(s) 215, 905, 1841
BtgI CCRYGG 1 cut(s) 2961
BtsI GCAGTG 3 cut(s) 1756, 2144, 2541
BtsIMutI CAGTG 8 cut(s) 132, 1252, 1756, 2144, 2381, 2541, 2977, 3197
BveI ACCTGC 1 cut(s) 766
Cac8I GCNNGC 6 cut(s) 195, 1291, 1856, 1914, 1970, 3596
CaiI CAGNNNCTG 3 cut(s) 758, 1007, 1769
CciI TCATGA 1 cut(s) 2191
Cfr10I RCCGGY 1 cut(s) 3434
Cfr13I GGNCC 4 cut(s) 213, 681, 2757, 3095
CseI GACGC 1 cut(s) 2676
CsiI ACCWGGT 1 cut(s) 37
Csp6I GTAC 8 cut(s) 1120, 1757, 2173, 2225, 3039, 3105, 3173, 3531
CviQI GTAC 8 cut(s) 1120, 1757, 2173, 2225, 3039, 3105, 3173, 3531
DpnI GATC 9 cut(s) 427, 462, 708, 795, 997, 1670, 2190, 2457, 2816
DpnII GATC 9 cut(s) 425, 460, 706, 793, 995, 1668, 2188, 2455, 2814
DraI TTTAAA 4 cut(s) 1408, 1815, 2128, 3552
DrdI GACNNNNNNGTC 1 cut(s) 1803
DriI GACNNNNNGTC 1 cut(s) 3341
DseDI GACNNNNNNGTC 1 cut(s) 1803
Eam1104I CTCTTC 2 cut(s) 2682, 2949
Eam1105I GACNNNNNGTC 1 cut(s) 3341
EarI CTCTTC 2 cut(s) 2682, 2949
EciI GGCGGA 2 cut(s) 544, 1912
Ecl136II GAGCTC 1 cut(s) 1544
Eco130I CCWWGG 3 cut(s) 2760, 2913, 2961
Eco147I AGGCCT 1 cut(s) 1841
Eco24I GRGCYC 2 cut(s) 1546, 2961
Eco31I GGTCTC 1 cut(s) 1116
Eco32I GATATC 2 cut(s) 2574, 2700
Eco47I GGWCC 3 cut(s) 681, 2757, 3095
Eco53kI GAGCTC 1 cut(s) 1544
Eco57I CTGAAG 7 cut(s) 2058, 2261, 2970, 3033, 3285, 3477, 3561
Eco88I CYCGRG 1 cut(s) 410
Eco91I GGTNACC 1 cut(s) 1250
EcoICRI GAGCTC 1 cut(s) 1544
EcoNI CCTNNNNNAGG 2 cut(s) 42, 2463
EcoO65I GGTNACC 1 cut(s) 1250
EcoRV GATATC 2 cut(s) 2574, 2700
EcoT14I CCWWGG 3 cut(s) 2760, 2913, 2961
EcoT22I ATGCAT 2 cut(s) 1238, 2342
EcoT38I GRGCYC 2 cut(s) 1546, 2961
ErhI CCWWGG 3 cut(s) 2760, 2913, 2961
FalI AAGNNNNNCTT 4 cut(s) 1192, 1224, 2789, 2821
FaqI GGGAC 1 cut(s) 2764
FauI CCCGC 1 cut(s) 3458
FbaI TGATCA 1 cut(s) 2188
Fnu4HI GCNGC 6 cut(s) 191, 507, 656, 1531, 2044, 2730
FriOI GRGCYC 2 cut(s) 1546, 2961
Fsp4HI GCNGC 6 cut(s) 191, 507, 656, 1531, 2044, 2730
GluI GCNGC 6 cut(s) 191, 507, 656, 1531, 2044, 2730
GsaI CCCAGC 4 cut(s) 1070, 1094, 1348, 1647
GsuI CTGGAG 3 cut(s) 461, 959, 1136
HaeIII GGCC 3 cut(s) 215, 905, 1841
HapII CCGG 2 cut(s) 3435, 3599
HgaI GACGC 1 cut(s) 2676
Hin1I GRCGYC 1 cut(s) 2668
HindIII AAGCTT 4 cut(s) 606, 2437, 2717, 2803
HpaII CCGG 2 cut(s) 3435, 3599
HphI GGTGA 7 cut(s) 236, 300, 635, 1370, 1970, 2192, 3527
Hpy166II GTNNAC 3 cut(s) 626, 2173, 2266
Hpy8I GTNNAC 3 cut(s) 626, 2173, 2266
Hpy99I CGWCG 2 cut(s) 2652, 2670
HpyCH4IV ACGT 1 cut(s) 234
HpyF10VI GCNNNNNNNGC 6 cut(s) 296, 1746, 1871, 2111, 2143, 3206
HpySE526I ACGT 1 cut(s) 234
Hsp92I GRCGYC 1 cut(s) 2668
Ksp22I TGATCA 1 cut(s) 2188
Kzo9I GATC 9 cut(s) 425, 460, 706, 793, 995, 1668, 2188, 2455, 2814
LguI GCTCTTC 1 cut(s) 2949
LmnI GCTCC 4 cut(s) 964, 1208, 2029, 3541
Lsp1109I GCAGC 6 cut(s) 202, 493, 642, 1517, 2055, 2716
LweI GCATC 9 cut(s) 658, 1623, 1630, 2327, 2591, 2607, 2682, 3145, 3316
MabI ACCWGGT 1 cut(s) 37
MaeII ACGT 1 cut(s) 234
MalI GATC 9 cut(s) 427, 462, 708, 795, 997, 1670, 2190, 2457, 2816
MboI GATC 9 cut(s) 425, 460, 706, 793, 995, 1668, 2188, 2455, 2814
MfeI CAATTG 1 cut(s) 2858
MflI RGATCY 5 cut(s) 425, 460, 706, 793, 2455
MhlI GDGCHC 3 cut(s) 1546, 2961, 2979
MlyI GAGTC 5 cut(s) 104, 155, 443, 566, 1894
MmeI TCCRAC 2 cut(s) 399, 2051
Mph1103I ATGCAT 2 cut(s) 1238, 2342
MroXI GAANNNNTTC 1 cut(s) 2439
MslI CAYNNNNRTG 4 cut(s) 1432, 2474, 2591, 2982
MspA1I CMGCKG 2 cut(s) 1874, 2046
MspI CCGG 2 cut(s) 3435, 3599
MunI CAATTG 1 cut(s) 2858
Mva1269I GAATGC 2 cut(s) 2340, 2399
MwoI GCNNNNNNNGC 6 cut(s) 296, 1746, 1871, 2111, 2143, 3206
NcoI CCATGG 1 cut(s) 2961
NdeII GATC 9 cut(s) 425, 460, 706, 793, 995, 1668, 2188, 2455, 2814
NlaIV GGNNCC 6 cut(s) 214, 355, 462, 1197, 2457, 3471
NmuCI GTSAC 5 cut(s) 127, 224, 361, 593, 3607
NsiI ATGCAT 2 cut(s) 1238, 2342
NspI RCATGY 3 cut(s) 1352, 2225, 2901
PagI TCATGA 1 cut(s) 2191
PceI AGGCCT 1 cut(s) 1841
PciI ACATGT 2 cut(s) 2221, 2897
PciSI GCTCTTC 1 cut(s) 2949
PctI GAATGC 2 cut(s) 2340, 2399
PdmI GAANNNNTTC 1 cut(s) 2439
PflMI CCANNNNNTGG 2 cut(s) 609, 1351
PfoI TCCNGGA 4 cut(s) 1886, 2833, 2890, 3354
PkrI GCNGC 6 cut(s) 192, 508, 657, 1532, 2045, 2731
PleI GAGTC 5 cut(s) 104, 154, 443, 565, 1894
PpsI GAGTC 5 cut(s) 104, 154, 443, 565, 1894
PscI ACATGT 2 cut(s) 2221, 2897
PshBI ATTAAT 3 cut(s) 690, 882, 2298
Psp124BI GAGCTC 1 cut(s) 1546
PspEI GGTNACC 1 cut(s) 1250
PspFI CCCAGC 4 cut(s) 1066, 1090, 1344, 1643
PspN4I GGNNCC 6 cut(s) 214, 355, 462, 1197, 2457, 3471
PspPI GGNCC 4 cut(s) 213, 681, 2757, 3095
PsrI GAACNNNNNNTAC 4 cut(s) 1605, 1637, 2887, 2919
PstI CTGCAG 5 cut(s) 511, 660, 1107, 2028, 2548
PstNI CAGNNNCTG 3 cut(s) 758, 1007, 1769
PsuI RGATCY 5 cut(s) 425, 460, 706, 793, 2455
PvuII CAGCTG 2 cut(s) 1874, 2046
RsaI GTAC 8 cut(s) 1121, 1758, 2174, 2226, 3040, 3106, 3174, 3532
RsaNI GTAC 8 cut(s) 1120, 1757, 2173, 2225, 3039, 3105, 3173, 3531
RseI CAYNNNNRTG 4 cut(s) 1432, 2474, 2591, 2982
SacI GAGCTC 1 cut(s) 1546
SapI GCTCTTC 1 cut(s) 2949
SatI GCNGC 6 cut(s) 191, 507, 656, 1531, 2044, 2730
Sau3AI GATC 9 cut(s) 425, 460, 706, 793, 995, 1668, 2188, 2455, 2814
Sau96I GGNCC 4 cut(s) 213, 681, 2757, 3095
ScaI AGTACT 2 cut(s) 1758, 3532
SchI GAGTC 5 cut(s) 104, 155, 443, 566, 1894
SduI GDGCHC 3 cut(s) 1546, 2961, 2979
SexAI ACCWGGT 1 cut(s) 37
SfaNI GCATC 9 cut(s) 658, 1623, 1630, 2327, 2591, 2607, 2682, 3145, 3316
SfcI CTRYAG 9 cut(s) 105, 348, 507, 656, 1103, 2024, 2544, 2577, 3369
SinI GGWCC 3 cut(s) 681, 2757, 3095
SmiI ATTTAAAT 1 cut(s) 2128
SmiMI CAYNNNNRTG 4 cut(s) 1432, 2474, 2591, 2982
SmlI CTYRAG 2 cut(s) 1902, 2849
SmoI CTYRAG 2 cut(s) 1902, 2849
SpeI ACTAGT 1 cut(s) 2990
SseBI AGGCCT 1 cut(s) 1841
SsiI CCGC 7 cut(s) 470, 529, 613, 1897, 1947, 3311, 3465
SspI AATATT 2 cut(s) 688, 1222
SstI GAGCTC 1 cut(s) 1546
StuI AGGCCT 1 cut(s) 1841
StyI CCWWGG 3 cut(s) 2760, 2913, 2961
SwaI ATTTAAAT 1 cut(s) 2128
TaiI ACGT 1 cut(s) 237
TaqI TCGA 7 cut(s) 144, 152, 1275, 1432, 2310, 2641, 3345
TatI WGTACW 5 cut(s) 1756, 2172, 2224, 3172, 3530
TscAI CASTG 8 cut(s) 132, 1252, 1756, 2144, 2388, 2548, 2984, 3197
TseFI GTSAC 5 cut(s) 127, 224, 361, 593, 3607
TseI GCWGC 6 cut(s) 190, 506, 655, 1530, 2043, 2729
Tsp45I GTSAC 5 cut(s) 127, 224, 361, 593, 3607
TspRI CASTG 8 cut(s) 132, 1252, 1756, 2144, 2388, 2548, 2984, 3197
Van91I CCANNNNNTGG 2 cut(s) 609, 1351
VpaK11BI GGWCC 3 cut(s) 681, 2757, 3095
VspI ATTAAT 3 cut(s) 690, 882, 2298
XagI CCTNNNNNAGG 2 cut(s) 42, 2463
XapI RAATTY 4 cut(s) 727, 2524, 3349, 3359
XbaI TCTAGA 2 cut(s) 1517, 1538
XceI RCATGY 3 cut(s) 1352, 2225, 2901
XcmI CCANNNNNNNNNTGG 3 cut(s) 1352, 2224, 2740
XmnI GAANNNNTTC 1 cut(s) 2439
ZrmI AGTACT 2 cut(s) 1758, 3532
Zsp2I ATGCAT 2 cut(s) 1238, 2342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.