Rorug05G0124000

presynapse organization

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0005139
Physical Location & Seq
Reverse (-)
10937585 .. 10986484
48900 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0124000.1

Sequence Viewer

Length: 2265 bp
ATGGCGTTGCGACTCTCATTGGTAGCAGTTCTACTCCTGTTATTGGTGGCTAGTACTACTACAACAACAGCAGCTGCTGCTCAAGCCCTGCCTGGTTGCTCAGACAAGTGCGGCAATCTCACAATTCCATACCCATTTGGCATGGAGGAGGGTTGTTACCTGCGAGAAGAATTCTTTATCAATTGTAGCAATACCACCCAACCACCAACAGCATATTTAAGAGTCAGCAATATCATTGTTACTAACATTTCCCTTGATGAAGGTGAGTTGCAAATATCCAACAACGTGGCTGAAGCTTGCTATAACGAGCAGGGCAATGTGACATCCAGCAAGGATTATTCGCTCGACCTGCCCCTTCCTTATACGATATCCGATACCAAAAACAAGCTCTACACCGTTGGTTGTGACACTTATTCAATTTTACAGGGCTTCCTAGGGGAAGATGAGTTCGATACGGGGTGCATTTCCATATGCAACAGGCTTGACATTGTTGATCAATATTCTTGCTCTGGCGCTGGGTGTTGCCAGACTAACATCCCCAGAGGGTTGAAAAATACGACGGTGACGTTGTATACCATCAACAGTCATAAGGATATATGGGGCTTTAACCCCTGCAGCTACGCCTTCATTGCAGAGCAAGGACAGTTCAATTTCTCTGCTGCAAGTTTAAAGAAACAGGACAACAACTCCTGGCTTCCAGCGGTTCTTAATTGGGCTATTGGGAATGACACAGACTCCTGTGATGAAGCTCAAAAGAGGAAGGATTTCGCTTGCAAGGCTAATAGCAGGTGCGCCAACGCGCCTATCAATGGGTCTGTAGGTTACTTGTGCCAATGCTTACCTGGTTATGAAGGAAACCCCTACCATCCAGATGGTTGCCAAGATATTGATGAGTGCAAGGCTTCAAACCCTTGCAACATTGGAATGTGCATCAATTCACCTTCAGGAAATTACTCTTGTTTATGTCCCAAAGGATACAAAAATGATGGCACAAATCGACAGAGTTGCATCAAAGACGATACTAAAAACAACTCAAAGATAACTGTCCTGCTTACTATCGCATTGAGTGTAAGTGTAGGCTTCTTGGTTTTTTTCATTGGAATTTCATGGACATATTGGGGAATAAAGAAAAGAAACTTCATTAAGCTCAAAGAGAGGTACTTTAAAGAAAATGGTGGTTTGTTATTGCAAAAACAACTCTTTCATCATGGAGGCTCTGTGGAGACAACAAGAATTTTTACTGCAGAAGAACTTGAGAAGGCCACAAACAATTACCATGAAAGTAGAGTCCTTGGTGAAGGAGGATATGGAACCGTTTATAAAGGAATACTACTAGATAACAAAGTGGTTGCCATTAAAAAGTCTAAAATTGCTGCCCCGGCCCAGAGTGATCAATTTGTTAATGAGGTGATTGTTCTTTCTCAAATCAATCACAGAAATGTAGTCAGGCTATTAGGTTGTTGCTTAGAGACAGAAACACCTTTACTGATTTATGAGTTCATCACCAATGGCACTCTTTATGAGCACATTCATAAGAATAGATCACTACTTTCTTTGGAATTACGAATGAAGATAGCAGCTGAAACTGCGGGAGCACTAGCATACCTACATTCCTCAACTTCCATGCCAATTATACATCGAGATGTGAAAGCTATGAATATACTATTAGATGATAACTATACAGCAAAAGTGGCAGACTTTGGAGCGTCACGATTGATTCCTTTAGGTCAAACTGAATTAGAAACTTTAGTACTAGGGACATTTGGTTACCTCGACCCTGAATATTTGCAATCAAACCAACTAACAGAAAAGAGTGACGTTTACAGCTTTGGAGTTGTCCTGCTGGAGCTAATAACTAGCAAAGTGGCACTTTGTACAAATAGATGCTTAGCAAGCATCTTCATCTCTGCCATGGAAGAAGGTTGGCTGGATCAAATTCTTGATGATAATATAGTGAATGATGGAAATATGGAGATGGTAAAAATTGTAGCCAATCTTGCAAAAAGATGTTTAAGTGTAAAAGGGCAGGAGAGGCCAACCATGAAAGAGGTAGCGATGGAGCTAGAAGGAATGAGAATGATGGCAAAGCATCCATGGAGAAACAATGCTGATTTCTGTCCAGAAGAGAACGAGAGTCTGCTCAGTTCACTTGATGCAAACACTCACGTGGTGGATATTAGAGGTGATGGTGGTTCTGGCAGTACAACTACCAGGTATGACAGCATGCAAATCCAAATGTTAATTTCATACGAGGATGGACGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0000122 GO:0000228 GO:0000785 GO:0000790 GO:0001085 GO:0001103 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0004402 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0005911 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0008080 GO:0008134 GO:0008150 GO:0008152 GO:0009506 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010385 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0015630 GO:0016043 GO:0016070 GO:0016407 GO:0016410 GO:0016458 GO:0016569 GO:0016570 GO:0016573 GO:0016581 GO:0016740 GO:0016746 GO:0016747 GO:0017053 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0030054 GO:0031047 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0032993 GO:0034212 GO:0034641 GO:0036211 GO:0042393 GO:0042826 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043543 GO:0043966 GO:0043971 GO:0043972 GO:0044030 GO:0044154 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044728 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050808 GO:0051052 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0055044 GO:0060255 GO:0061733 GO:0065007 GO:0070013 GO:0070491 GO:0070603 GO:0071704 GO:0071840 GO:0072553 GO:0080090 GO:0080188 GO:0090304 GO:0090545 GO:0090568 GO:0097159 GO:0099172 GO:1901360 GO:1901363 GO:1901564 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1904949 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Jas PHD

Protein Analysis

754

Amino Acids

83.25

Weight (kDa)

5.23

Isoelectric Point (pI)

30.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 33 - 93 1.6e-10 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 425 - 684 4.3e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 428 - 688 2.9e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1320
AarI CACCTGC 1 cut(s) 777
Acc36I ACCTGC 3 cut(s) 168, 357, 777
AccI GTMKAC 1 cut(s) 572
AccII CGCG 1 cut(s) 800
AciI CCGC 3 cut(s) 111, 701, 1589
AclWI GGATC 1 cut(s) 1938
AcsI RAATTY 4 cut(s) 170, 1101, 1233, 1935
AcuI CTGAAG 2 cut(s) 312, 927
AcvI CACGTG 1 cut(s) 2167
AdeI CACNNNGTG 1 cut(s) 2170
AfaI GTAC 5 cut(s) 55, 1160, 1752, 1876, 2203
AfiI CCNNNNNNNGG 2 cut(s) 43, 809
AgsI TTSAA 4 cut(s) 417, 550, 649, 906
AjnI CCWGG 4 cut(s) 91, 689, 841, 2210
AleI CACNNNNGTG 1 cut(s) 2165
AloI GAACNNNNNNTCC 2 cut(s) 431, 463
Alw21I GWGCWC 2 cut(s) 1527, 1597
Alw26I GTCTC 2 cut(s) 1217, 1463
AlwI GGATC 1 cut(s) 1938
AlwNI CAGNNNCTG 2 cut(s) 74, 77
AoxI GGCC 3 cut(s) 1260, 1380, 2033
ApeKI GCWGC 7 cut(s) 71, 74, 77, 615, 659, 1373, 1577
ApoI RAATTY 4 cut(s) 170, 1101, 1233, 1935
Asp700I GAANNNNTTC 1 cut(s) 764
AspA2I CCTAGG 1 cut(s) 433
AspLEI GCGC 3 cut(s) 515, 794, 802
AspS9I GGNCC 1 cut(s) 1381
AsuC2I CCSGG 1 cut(s) 1379
AsuHPI GGTGA 7 cut(s) 275, 574, 930, 1307, 1420, 1495, 2195
AvrII CCTAGG 1 cut(s) 433
BbrPI CACGTG 1 cut(s) 2167
Bbv12I GWGCWC 2 cut(s) 1527, 1597
BbvI GCAGC 7 cut(s) 61, 64, 83, 627, 646, 1360, 1589
BcgI CGANNNNNNTGC 2 cut(s) 987, 1021
BciT130I CCWGG 4 cut(s) 93, 691, 843, 2212
BciVI GTATCC 1 cut(s) 968
BclI TGATCA 2 cut(s) 493, 1390
BcnI CCSGG 1 cut(s) 1379
BcoDI GTCTC 2 cut(s) 1217, 1463
BfaI CTAG 7 cut(s) 51, 434, 1334, 1598, 1754, 1857, 2063
BfmI CTRYAG 3 cut(s) 613, 816, 1242
BfoI RGCGCY 1 cut(s) 516
BfuAI ACCTGC 3 cut(s) 168, 357, 777
BfuI GTATCC 1 cut(s) 968
BisI GCNGC 8 cut(s) 72, 75, 78, 112, 616, 660, 1374, 1578
BlnI CCTAGG 1 cut(s) 433
BlpI GCTNAGC 1 cut(s) 1888
BlsI GCNGC 8 cut(s) 73, 76, 79, 113, 617, 661, 1375, 1579
BmcAI AGTACT 2 cut(s) 55, 1752
Bme1390I CCNGG 5 cut(s) 93, 691, 843, 1379, 2212
BmgT120I GGNCC 1 cut(s) 1381
BmiI GGNNCC 1 cut(s) 1312
BmrFI CCNGG 5 cut(s) 93, 691, 843, 1379, 2212
BmsI GCATC 6 cut(s) 939, 1017, 1874, 1905, 2098, 2143
BpmI CTGGAG 1 cut(s) 1865
Bpu1102I GCTNAGC 1 cut(s) 1888
BpuEI CTTGAG 2 cut(s) 66, 1274
BpuMI CCSGG 1 cut(s) 1379
BsaAI YACGTR 1 cut(s) 2167
BsaJI CCNNGG 5 cut(s) 433, 1291, 1377, 1911, 2093
BsaXI ACNNNNNCTCC 6 cut(s) 671, 701, 719, 749, 1203, 1233
Bsc4I CCNNNNNNNGG 2 cut(s) 43, 809
Bse3DI GCAATG 2 cut(s) 322, 627
BseBI CCWGG 4 cut(s) 93, 691, 843, 2212
BseDI CCNNGG 5 cut(s) 433, 1291, 1377, 1911, 2093
BseGI GGATG 5 cut(s) 323, 534, 865, 2089, 2260
BseLI CCNNNNNNNGG 2 cut(s) 43, 809
BseMI GCAATG 2 cut(s) 322, 627
BseMII CTCAG 2 cut(s) 114, 2155
BseRI GAGGAG 1 cut(s) 161
BseXI GCAGC 7 cut(s) 61, 64, 83, 627, 646, 1360, 1589
BseYI CCCAGC 1 cut(s) 515
Bsh1236I CGCG 1 cut(s) 800
BshFI GGCC 3 cut(s) 1262, 1382, 2035
BsiHKAI GWGCWC 2 cut(s) 1527, 1597
BsiSI CCGG 1 cut(s) 1379
BslFI GGGAC 2 cut(s) 951, 1771
BslI CCNNNNNNNGG 2 cut(s) 43, 809
BsmAI GTCTC 2 cut(s) 1217, 1463
BsmFI GGGAC 2 cut(s) 951, 1771
BsnI GGCC 3 cut(s) 1262, 1382, 2035
Bsp1286I GDGCHC 2 cut(s) 1527, 1597
Bsp1407I TGTACA 1 cut(s) 1874
Bsp143I GATC 4 cut(s) 493, 1390, 1541, 1930
Bsp1720I GCTNAGC 1 cut(s) 1888
Bsp19I CCATGG 2 cut(s) 1911, 2093
BspACI CCGC 3 cut(s) 111, 701, 1589
BspANI GGCC 3 cut(s) 1262, 1382, 2035
BspCNI CTCAG 2 cut(s) 113, 2154
BspFNI CGCG 1 cut(s) 800
BspLI GGNNCC 1 cut(s) 1312
BspMAI CTGCAG 2 cut(s) 617, 1246
BspMI ACCTGC 3 cut(s) 168, 357, 777
BspPI GGATC 1 cut(s) 1938
BsrDI GCAATG 2 cut(s) 322, 627
BsrGI TGTACA 1 cut(s) 1874
BssECI CCNNGG 5 cut(s) 433, 1291, 1377, 1911, 2093
BssMI GATC 4 cut(s) 493, 1390, 1541, 1930
BssNAI GTATAC 1 cut(s) 573
BssT1I CCWWGG 4 cut(s) 433, 1291, 1911, 2093
Bst1107I GTATAC 1 cut(s) 573
Bst2UI CCWGG 4 cut(s) 93, 691, 843, 2212
Bst4CI ACNGT 6 cut(s) 397, 562, 584, 645, 1045, 1315
Bst6I CTCTTC 1 cut(s) 2118
BstAPI GCANNNNNTGC 1 cut(s) 77
BstAUI TGTACA 1 cut(s) 1874
BstBAI YACGTR 1 cut(s) 2167
BstC8I GCNNGC 4 cut(s) 298, 772, 1894, 2225
BstDEI CTNAG 4 cut(s) 100, 1465, 1888, 2141
BstDSI CCRYGG 2 cut(s) 1911, 2093
BstEII GGTNACC 1 cut(s) 1766
BstF5I GGATG 5 cut(s) 323, 534, 865, 2089, 2260
BstFNI CGCG 1 cut(s) 800
BstH2I RGCGCY 1 cut(s) 516
BstHHI GCGC 3 cut(s) 515, 794, 802
BstKTI GATC 4 cut(s) 496, 1393, 1544, 1933
BstMAI GTCTC 2 cut(s) 1217, 1463
BstMBI GATC 4 cut(s) 493, 1390, 1541, 1930
BstNI CCWGG 4 cut(s) 93, 691, 843, 2212
BstNSI RCATGY 1 cut(s) 2227
BstPI GGTNACC 1 cut(s) 1766
BstSCI CCNGG 5 cut(s) 91, 689, 841, 1377, 2210
BstSFI CTRYAG 3 cut(s) 613, 816, 1242
BstUI CGCG 1 cut(s) 800
BstV1I GCAGC 7 cut(s) 61, 64, 83, 627, 646, 1360, 1589
BstXI CCANNNNNNTGG 2 cut(s) 286, 872
BstZ17I GTATAC 1 cut(s) 573
BsuI GTATCC 1 cut(s) 968
BsuRI GGCC 3 cut(s) 1262, 1382, 2035
BtgI CCRYGG 2 cut(s) 1911, 2093
BtgZI GCGATG 1 cut(s) 2069
BtsCI GGATG 5 cut(s) 323, 534, 865, 2089, 2260
BveI ACCTGC 3 cut(s) 168, 357, 777
Cac8I GCNNGC 4 cut(s) 298, 772, 1894, 2225
CaiI CAGNNNCTG 2 cut(s) 74, 77
CfoI GCGC 3 cut(s) 515, 794, 802
Cfr13I GGNCC 1 cut(s) 1381
CseI GACGC 1 cut(s) 1695
CsiI ACCWGGT 2 cut(s) 841, 2210
Csp6I GTAC 5 cut(s) 54, 1159, 1751, 1875, 2202
CviAII CATG 9 cut(s) 142, 1107, 1208, 1277, 1624, 1912, 2041, 2094, 2224
CviQI GTAC 5 cut(s) 54, 1159, 1751, 1875, 2202
DdeI CTNAG 4 cut(s) 100, 1465, 1888, 2141
DpnI GATC 4 cut(s) 495, 1392, 1543, 1932
DpnII GATC 4 cut(s) 493, 1390, 1541, 1930
DraI TTTAAA 2 cut(s) 669, 1165
DraIII CACNNNGTG 1 cut(s) 2170
Eam1104I CTCTTC 1 cut(s) 2118
EarI CTCTTC 1 cut(s) 2118
Eco130I CCWWGG 4 cut(s) 433, 1291, 1911, 2093
Eco32I GATATC 1 cut(s) 369
Eco57I CTGAAG 2 cut(s) 312, 927
Eco72I CACGTG 1 cut(s) 2167
Eco91I GGTNACC 1 cut(s) 1766
EcoO65I GGTNACC 1 cut(s) 1766
EcoRI GAATTC 1 cut(s) 170
EcoRII CCWGG 4 cut(s) 91, 689, 841, 2210
EcoRV GATATC 1 cut(s) 369
EcoT14I CCWWGG 4 cut(s) 433, 1291, 1911, 2093
ErhI CCWWGG 4 cut(s) 433, 1291, 1911, 2093
FaeI CATG 9 cut(s) 145, 1110, 1211, 1280, 1627, 1915, 2044, 2097, 2227
FalI AAGNNNNNCTT 2 cut(s) 1854, 1886
FaqI GGGAC 2 cut(s) 951, 1771
FatI CATG 9 cut(s) 141, 1106, 1207, 1276, 1623, 1911, 2040, 2093, 2223
FauI CCCGC 1 cut(s) 1582
FauNDI CATATG 1 cut(s) 470
FbaI TGATCA 2 cut(s) 493, 1390
FblI GTMKAC 1 cut(s) 572
Fnu4HI GCNGC 8 cut(s) 72, 75, 78, 112, 616, 660, 1374, 1578
FokI GGATG 4 cut(s) 310, 521, 852, 2076
Fsp4HI GCNGC 8 cut(s) 72, 75, 78, 112, 616, 660, 1374, 1578
FspBI CTAG 7 cut(s) 51, 434, 1334, 1598, 1754, 1857, 2063
GlaI GCGC 3 cut(s) 514, 793, 801
GluI GCNGC 8 cut(s) 72, 75, 78, 112, 616, 660, 1374, 1578
GsaI CCCAGC 1 cut(s) 519
GsuI CTGGAG 1 cut(s) 1865
HaeII RGCGCY 1 cut(s) 516
HaeIII GGCC 3 cut(s) 1262, 1382, 2035
HapII CCGG 1 cut(s) 1379
HgaI GACGC 1 cut(s) 1695
HhaI GCGC 3 cut(s) 515, 794, 802
Hin1II CATG 9 cut(s) 145, 1110, 1211, 1280, 1627, 1915, 2044, 2097, 2227
Hin6I GCGC 3 cut(s) 513, 792, 800
HinP1I GCGC 3 cut(s) 513, 792, 800
HindIII AAGCTT 1 cut(s) 294
HinfI GANTC 6 cut(s) 12, 222, 734, 1287, 1717, 2134
HpaII CCGG 1 cut(s) 1379
HphI GGTGA 7 cut(s) 275, 574, 930, 1307, 1420, 1495, 2195
Hpy166II GTNNAC 3 cut(s) 573, 1822, 2147
Hpy188I TCNGA 2 cut(s) 103, 373
Hpy188III TCNNGA 6 cut(s) 869, 945, 1640, 1710, 1940, 2120
Hpy8I GTNNAC 3 cut(s) 573, 1822, 2147
Hpy99I CGWCG 1 cut(s) 562
HpyCH4III ACNGT 6 cut(s) 397, 562, 584, 645, 1045, 1315
HpyCH4IV ACGT 4 cut(s) 285, 566, 1818, 2166
HpyF3I CTNAG 4 cut(s) 100, 1465, 1888, 2141
HpySE526I ACGT 4 cut(s) 285, 566, 1818, 2166
Hsp92II CATG 9 cut(s) 145, 1110, 1211, 1280, 1627, 1915, 2044, 2097, 2227
HspAI GCGC 3 cut(s) 513, 792, 800
Ksp22I TGATCA 2 cut(s) 493, 1390
Kzo9I GATC 4 cut(s) 493, 1390, 1541, 1930
LmnI GCTCC 4 cut(s) 1592, 1703, 1846, 2059
Lsp1109I GCAGC 7 cut(s) 61, 64, 83, 627, 646, 1360, 1589
LweI GCATC 6 cut(s) 939, 1017, 1874, 1905, 2098, 2143
MabI ACCWGGT 2 cut(s) 841, 2210
MaeI CTAG 7 cut(s) 51, 434, 1334, 1598, 1754, 1857, 2063
MaeII ACGT 4 cut(s) 285, 566, 1818, 2166
MaeIII GTNAC 9 cut(s) 155, 238, 319, 404, 562, 821, 1707, 1766, 1814
MalI GATC 4 cut(s) 495, 1392, 1543, 1932
MboI GATC 4 cut(s) 493, 1390, 1541, 1930
MboII GAAGA 7 cut(s) 179, 452, 1259, 1582, 1891, 1928, 2135
MfeI CAATTG 1 cut(s) 181
MhlI GDGCHC 2 cut(s) 1527, 1597
MlyI GAGTC 5 cut(s) 6, 231, 728, 1296, 2143
MmeI TCCRAC 1 cut(s) 303
MroXI GAANNNNTTC 1 cut(s) 764
MslI CAYNNNNRTG 5 cut(s) 870, 923, 1437, 1641, 2165
MspA1I CMGCKG 3 cut(s) 74, 701, 1580
MspI CCGG 1 cut(s) 1379
MspR9I CCNGG 5 cut(s) 93, 691, 843, 1379, 2212
MunI CAATTG 1 cut(s) 181
MvaI CCWGG 4 cut(s) 93, 691, 843, 2212
MvnI CGCG 1 cut(s) 800
NciI CCSGG 1 cut(s) 1379
NcoI CCATGG 2 cut(s) 1911, 2093
NdeI CATATG 1 cut(s) 470
NdeII GATC 4 cut(s) 493, 1390, 1541, 1930
NlaIII CATG 9 cut(s) 145, 1110, 1211, 1280, 1627, 1915, 2044, 2097, 2227
NlaIV GGNNCC 1 cut(s) 1312
NmuCI GTSAC 5 cut(s) 319, 404, 562, 1707, 1814
NspI RCATGY 1 cut(s) 2227
OliI CACNNNNGTG 1 cut(s) 2165
PaeI GCATGC 1 cut(s) 2227
PaqCI CACCTGC 1 cut(s) 777
PcsI WCGNNNNNNNCGW 1 cut(s) 563
PdmI GAANNNNTTC 1 cut(s) 764
PfeI GAWTC 1 cut(s) 1717
PkrI GCNGC 8 cut(s) 73, 76, 79, 113, 617, 661, 1375, 1579
PleI GAGTC 5 cut(s) 6, 230, 728, 1295, 2142
PmaCI CACGTG 1 cut(s) 2167
PmlI CACGTG 1 cut(s) 2167
PpsI GAGTC 5 cut(s) 6, 230, 728, 1295, 2142
Ppu21I YACGTR 1 cut(s) 2167
PsiI TTATAA 1 cut(s) 1320
Psp6I CCWGG 4 cut(s) 91, 689, 841, 2210
PspCI CACGTG 1 cut(s) 2167
PspEI GGTNACC 1 cut(s) 1766
PspFI CCCAGC 1 cut(s) 515
PspGI CCWGG 4 cut(s) 91, 689, 841, 2210
PspN4I GGNNCC 1 cut(s) 1312
PspPI GGNCC 1 cut(s) 1381
PstI CTGCAG 2 cut(s) 617, 1246
PstNI CAGNNNCTG 2 cut(s) 74, 77
PvuII CAGCTG 2 cut(s) 74, 1580
RsaI GTAC 5 cut(s) 55, 1160, 1752, 1876, 2203
RsaNI GTAC 5 cut(s) 54, 1159, 1751, 1875, 2202
RseI CAYNNNNRTG 5 cut(s) 870, 923, 1437, 1641, 2165
SatI GCNGC 8 cut(s) 72, 75, 78, 112, 616, 660, 1374, 1578
Sau3AI GATC 4 cut(s) 493, 1390, 1541, 1930
Sau96I GGNCC 1 cut(s) 1381
ScaI AGTACT 2 cut(s) 55, 1752
SchI GAGTC 5 cut(s) 6, 231, 728, 1296, 2143
ScrFI CCNGG 5 cut(s) 93, 691, 843, 1379, 2212
SduI GDGCHC 2 cut(s) 1527, 1597
SexAI ACCWGGT 2 cut(s) 841, 2210
SfaNI GCATC 6 cut(s) 939, 1017, 1874, 1905, 2098, 2143
SfcI CTRYAG 3 cut(s) 613, 816, 1242
SmiMI CAYNNNNRTG 5 cut(s) 870, 923, 1437, 1641, 2165
SmlI CTYRAG 2 cut(s) 81, 1253
SmoI CTYRAG 2 cut(s) 81, 1253
SphI GCATGC 1 cut(s) 2227
SsiI CCGC 3 cut(s) 111, 701, 1589
SspI AATATT 2 cut(s) 500, 1784
SspMI CTAG 7 cut(s) 51, 434, 1334, 1598, 1754, 1857, 2063
StyD4I CCNGG 5 cut(s) 91, 689, 841, 1377, 2210
StyI CCWWGG 4 cut(s) 433, 1291, 1911, 2093
TaaI ACNGT 6 cut(s) 397, 562, 584, 645, 1045, 1315
TaiI ACGT 4 cut(s) 288, 569, 1821, 2169
TaqI TCGA 5 cut(s) 345, 450, 997, 1639, 1773
TatI WGTACW 4 cut(s) 53, 1750, 1874, 2201
TauI GCSGC 1 cut(s) 114
TfiI GAWTC 1 cut(s) 1717
TseFI GTSAC 5 cut(s) 319, 404, 562, 1707, 1814
TseI GCWGC 7 cut(s) 71, 74, 77, 615, 659, 1373, 1577
Tsp45I GTSAC 5 cut(s) 319, 404, 562, 1707, 1814
XapI RAATTY 4 cut(s) 170, 1101, 1233, 1935
XceI RCATGY 1 cut(s) 2227
XcmI CCANNNNNNNNNTGG 1 cut(s) 839
XmaJI CCTAGG 1 cut(s) 433
XmiI GTMKAC 1 cut(s) 572
XmnI GAANNNNTTC 1 cut(s) 764
XspI CTAG 7 cut(s) 51, 434, 1334, 1598, 1754, 1857, 2063
ZrmI AGTACT 2 cut(s) 55, 1752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.