presynapse organization
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G14980 AT3G14980 AT3G14980 AT3G14980 AT3G14980 AT3G14980 |
| fragaria_vesca | FvH4_3g18560 FvH4_3g18560 |
| malus_domestica | MD03G1241200.v1.1 MD11G1260600.v1.1 |
| prunus_persica | Prupe.4G167700_v2.0.a1 Prupe.4G167700_v2.0.a1 Prupe.4G167700_v2.0.a1 Prupe.4G167700_v2.0.a1 Prupe.4G167700_v2.0.a1 |
| pyrus_communis | pycom03g18780 pycom11g23000 |
| rosa_chinensis | RchiOBHm_Chr5g0031311 |
| rosa_laevigata | RLG00000033300 |
| rosa_multiflora | Rmu_co8157186.1_g000001 Rmu_sc0007782.1_g000017 |
| rosa_roxburghii | Rroxscaffold_1G00048980 |
| rosa_rugosa | Rorug05G0124000 Rorug05G0124100 Rorug05G0124200 |
| rosa_samantha | Rh5AG217300 Rh5BG217000 Rh5CG240600 Rh5DG222200 |
| rosa_wichuraiana | Rw5G019870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 255 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2157 |
| Acc16I | TGCGCA | 1 cut(s) | 1489 |
| Acc36I | ACCTGC | 1 cut(s) | 1120 |
| AccB1I | GGYRCC | 1 cut(s) | 3326 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 963, 1705 |
| AccII | CGCG | 1 cut(s) | 2266 |
| AciI | CCGC | 9 cut(s) | 312, 743, 824, 883, 967, 1885, 2251, 2301, 3629 |
| AcsI | RAATTY | 6 cut(s) | 279, 1081, 2842, 3344, 3667, 3677 |
| AcuI | CTGAAG | 5 cut(s) | 2412, 2579, 3288, 3795, 3876 |
| AcyI | GRCGYC | 1 cut(s) | 2986 |
| AfaI | GTAC | 7 cut(s) | 1475, 2544, 2813, 3358, 3424, 3492, 3847 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 398, 963, 1705, 2247, 2454, 2783, 2971, 3483 |
| AflIII | ACRYGT | 3 cut(s) | 2539, 3215, 3499 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 3503, 3659 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1546, 1578 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2540, 2572 |
| Alw21I | GWGCWC | 3 cut(s) | 66, 1900, 3297 |
| Alw26I | GTCTC | 3 cut(s) | 1470, 2379, 2604 |
| Alw44I | GTGCAC | 1 cut(s) | 3293 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1112, 1361, 2123 |
| AoxI | GGCC | 4 cut(s) | 567, 1257, 1882, 2193 |
| ApaLI | GTGCAC | 1 cut(s) | 3293 |
| ApeKI | GCWGC | 6 cut(s) | 260, 544, 860, 1009, 2397, 3047 |
| ApoI | RAATTY | 6 cut(s) | 279, 1081, 2842, 3344, 3667, 3677 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 475, 507, 1019, 1051 |
| AseI | ATTAAT | 3 cut(s) | 1044, 1236, 2616 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2757 |
| AspLEI | GCGC | 2 cut(s) | 1490, 2266 |
| AspS9I | GGNCC | 4 cut(s) | 287, 567, 1035, 3413 |
| AsuC2I | CCSGG | 1 cut(s) | 302 |
| AsuHPI | GGTGA | 8 cut(s) | 107, 383, 590, 654, 989, 1724, 2324, 3842 |
| AsuNHI | GCTAGC | 1 cut(s) | 104 |
| AvaII | GGWCC | 3 cut(s) | 287, 1035, 3413 |
| AxyI | CCTNAGG | 1 cut(s) | 765 |
| BaeGI | GKGCMC | 1 cut(s) | 3297 |
| BamHI | GGATCC | 3 cut(s) | 50, 814, 2773 |
| BanI | GGYRCC | 1 cut(s) | 3326 |
| BanII | GRGCYC | 2 cut(s) | 1900, 3279 |
| BauI | CACGAG | 1 cut(s) | 109 |
| BbsI | GAAGAC | 3 cut(s) | 495, 2585, 3111 |
| Bbv12I | GWGCWC | 3 cut(s) | 66, 1900, 3297 |
| BbvCI | CCTCAGC | 2 cut(s) | 264, 753 |
| BbvI | GCAGC | 6 cut(s) | 247, 556, 847, 996, 2409, 3034 |
| BceAI | ACGGC | 1 cut(s) | 2264 |
| BcnI | CCSGG | 1 cut(s) | 302 |
| BcoDI | GTCTC | 3 cut(s) | 1470, 2379, 2604 |
| BfmI | CTRYAG | 9 cut(s) | 459, 702, 861, 1010, 1457, 2378, 2862, 2895, 3687 |
| BfuAI | ACCTGC | 1 cut(s) | 1120 |
| BglII | AGATCT | 2 cut(s) | 779, 1060 |
| BisI | GCNGC | 7 cut(s) | 261, 545, 861, 1010, 1885, 2398, 3048 |
| BlsI | GCNGC | 7 cut(s) | 262, 546, 862, 1011, 1886, 2399, 3049 |
| BmcAI | AGTACT | 1 cut(s) | 3847 |
| Bme18I | GGWCC | 3 cut(s) | 287, 1035, 3413 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 3503, 3659 |
| BmgT120I | GGNCC | 4 cut(s) | 287, 567, 1035, 3413 |
| BmiI | GGNNCC | 7 cut(s) | 52, 568, 709, 816, 1551, 2775, 3328 |
| BmsI | GCATC | 8 cut(s) | 1012, 1977, 2645, 2909, 2925, 3000, 3463, 3634 |
| BmtI | GCTAGC | 1 cut(s) | 108 |
| BpiI | GAAGAC | 3 cut(s) | 495, 2585, 3111 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 668, 700, 2570, 2602 |
| BpmI | CTGGAG | 4 cut(s) | 153, 815, 1313, 1490 |
| Bpu10I | CCTNAGC | 2 cut(s) | 264, 753 |
| BpuEI | CTTGAG | 2 cut(s) | 2241, 3152 |
| BpuMI | CCSGG | 1 cut(s) | 302 |
| BsaBI | GATNNNNATC | 1 cut(s) | 843 |
| BsaHI | GRCGYC | 1 cut(s) | 2986 |
| BsaI | GGTCTC | 1 cut(s) | 1470 |
| BsaJI | CCNNGG | 8 cut(s) | 290, 672, 1951, 2076, 2971, 3231, 3279, 3942 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1194, 1224 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 398, 963, 1705, 2247, 2454, 2783, 2971, 3483 |
| Bse21I | CCTNAGG | 1 cut(s) | 765 |
| Bse3DI | GCAATG | 3 cut(s) | 1592, 1927, 3733 |
| Bse8I | GATNNNNATC | 1 cut(s) | 843 |
| BseDI | CCNNGG | 8 cut(s) | 290, 672, 1951, 2076, 2971, 3231, 3279, 3942 |
| BseJI | GATNNNNATC | 1 cut(s) | 843 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 398, 963, 1705, 2247, 2454, 2783, 2971, 3483 |
| BseMI | GCAATG | 3 cut(s) | 1592, 1927, 3733 |
| BseRI | GAGGAG | 2 cut(s) | 260, 1684 |
| BseSI | GKGCMC | 1 cut(s) | 3297 |
| BseXI | GCAGC | 6 cut(s) | 247, 556, 847, 996, 2409, 3034 |
| BseYI | CCCAGC | 3 cut(s) | 1420, 1444, 1698 |
| BsgI | GTGCAG | 2 cut(s) | 619, 1021 |
| Bsh1236I | CGCG | 1 cut(s) | 2266 |
| BshFI | GGCC | 4 cut(s) | 569, 1259, 1884, 2195 |
| BshNI | GGYRCC | 1 cut(s) | 3326 |
| BsiHKAI | GWGCWC | 3 cut(s) | 66, 1900, 3297 |
| BsiSI | CCGG | 2 cut(s) | 302, 3914 |
| BslFI | GGGAC | 1 cut(s) | 3082 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 398, 963, 1705, 2247, 2454, 2783, 2971, 3483 |
| BsmAI | GTCTC | 3 cut(s) | 1470, 2379, 2604 |
| BsmFI | GGGAC | 1 cut(s) | 3082 |
| BsmI | GAATGC | 2 cut(s) | 2658, 2717 |
| BsnI | GGCC | 4 cut(s) | 569, 1259, 1884, 2195 |
| Bso31I | GGTCTC | 1 cut(s) | 1470 |
| Bsp1286I | GDGCHC | 4 cut(s) | 66, 1900, 3279, 3297 |
| Bsp1407I | TGTACA | 2 cut(s) | 2811, 3490 |
| Bsp19I | CCATGG | 1 cut(s) | 3279 |
| BspACI | CCGC | 9 cut(s) | 312, 743, 824, 883, 967, 1885, 2251, 2301, 3629 |
| BspANI | GGCC | 4 cut(s) | 569, 1259, 1884, 2195 |
| BspFNI | CGCG | 1 cut(s) | 2266 |
| BspHI | TCATGA | 1 cut(s) | 2509 |
| BspLI | GGNNCC | 7 cut(s) | 52, 568, 709, 816, 1551, 2775, 3328 |
| BspMAI | CTGCAG | 5 cut(s) | 865, 1014, 1461, 2382, 2866 |
| BspMI | ACCTGC | 1 cut(s) | 1120 |
| BspOI | GCTAGC | 1 cut(s) | 108 |
| BspQI | GCTCTTC | 1 cut(s) | 3267 |
| BspT107I | GGYRCC | 1 cut(s) | 3326 |
| BspTNI | GGTCTC | 1 cut(s) | 1470 |
| BsrDI | GCAATG | 3 cut(s) | 1592, 1927, 3733 |
| BsrGI | TGTACA | 2 cut(s) | 2811, 3490 |
| BssECI | CCNNGG | 8 cut(s) | 290, 672, 1951, 2076, 2971, 3231, 3279, 3942 |
| BssNI | GRCGYC | 1 cut(s) | 2986 |
| BssSI | CACGAG | 1 cut(s) | 109 |
| BssT1I | CCWWGG | 2 cut(s) | 3231, 3279 |
| Bst2BI | CACGAG | 1 cut(s) | 109 |
| Bst6I | CTCTTC | 3 cut(s) | 190, 3000, 3267 |
| BstACI | GRCGYC | 1 cut(s) | 2986 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2100 |
| BstAUI | TGTACA | 2 cut(s) | 2811, 3490 |
| BstC8I | GCNNGC | 7 cut(s) | 106, 549, 1645, 2210, 2268, 2324, 3911 |
| BstDSI | CCRYGG | 1 cut(s) | 3279 |
| BstEII | GGTNACC | 1 cut(s) | 1604 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 396, 2781 |
| BstFNI | CGCG | 1 cut(s) | 2266 |
| BstHHI | GCGC | 2 cut(s) | 1490, 2266 |
| BstMAI | GTCTC | 3 cut(s) | 1470, 2379, 2604 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 650, 2100, 2225, 2465, 2497, 3524 |
| BstNSI | RCATGY | 4 cut(s) | 1706, 2543, 3219, 3503 |
| BstPI | GGTNACC | 1 cut(s) | 1604 |
| BstSFI | CTRYAG | 9 cut(s) | 459, 702, 861, 1010, 1457, 2378, 2862, 2895, 3687 |
| BstSLI | GKGCMC | 1 cut(s) | 3297 |
| BstUI | CGCG | 1 cut(s) | 2266 |
| BstV1I | GCAGC | 6 cut(s) | 247, 556, 847, 996, 2409, 3034 |
| BstV2I | GAAGAC | 3 cut(s) | 495, 2585, 3111 |
| BstX2I | RGATCY | 8 cut(s) | 25, 50, 308, 779, 814, 1060, 1147, 2773 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 697 |
| BstYI | RGATCY | 8 cut(s) | 25, 50, 308, 779, 814, 1060, 1147, 2773 |
| Bsu36I | CCTNAGG | 1 cut(s) | 765 |
| BsuRI | GGCC | 4 cut(s) | 569, 1259, 1884, 2195 |
| BtgI | CCRYGG | 1 cut(s) | 3279 |
| BtsI | GCAGTG | 4 cut(s) | 2110, 2498, 2859, 3790 |
| BveI | ACCTGC | 1 cut(s) | 1120 |
| Cac8I | GCNNGC | 7 cut(s) | 106, 549, 1645, 2210, 2268, 2324, 3911 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1112, 1361, 2123 |
| CciI | TCATGA | 1 cut(s) | 2509 |
| CfoI | GCGC | 2 cut(s) | 1490, 2266 |
| Cfr13I | GGNCC | 4 cut(s) | 287, 567, 1035, 3413 |
| CseI | GACGC | 1 cut(s) | 2994 |
| CsiI | ACCWGGT | 1 cut(s) | 391 |
| Csp6I | GTAC | 7 cut(s) | 1474, 2543, 2812, 3357, 3423, 3491, 3846 |
| CviQI | GTAC | 7 cut(s) | 1474, 2543, 2812, 3357, 3423, 3491, 3846 |
| DraI | TTTAAA | 4 cut(s) | 1762, 2169, 2482, 3867 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2157 |
| DriI | GACNNNNNGTC | 2 cut(s) | 3503, 3659 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2157 |
| Eam1104I | CTCTTC | 3 cut(s) | 190, 3000, 3267 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 3503, 3659 |
| EarI | CTCTTC | 3 cut(s) | 190, 3000, 3267 |
| EciI | GGCGGA | 2 cut(s) | 898, 2266 |
| Ecl136II | GAGCTC | 1 cut(s) | 1898 |
| Eco130I | CCWWGG | 2 cut(s) | 3231, 3279 |
| Eco147I | AGGCCT | 1 cut(s) | 2195 |
| Eco24I | GRGCYC | 2 cut(s) | 1900, 3279 |
| Eco31I | GGTCTC | 1 cut(s) | 1470 |
| Eco32I | GATATC | 2 cut(s) | 2892, 3018 |
| Eco47I | GGWCC | 3 cut(s) | 287, 1035, 3413 |
| Eco53kI | GAGCTC | 1 cut(s) | 1898 |
| Eco57I | CTGAAG | 5 cut(s) | 2412, 2579, 3288, 3795, 3876 |
| Eco81I | CCTNAGG | 1 cut(s) | 765 |
| Eco91I | GGTNACC | 1 cut(s) | 1604 |
| EcoICRI | GAGCTC | 1 cut(s) | 1898 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 396, 2781 |
| EcoO65I | GGTNACC | 1 cut(s) | 1604 |
| EcoRV | GATATC | 2 cut(s) | 2892, 3018 |
| EcoT14I | CCWWGG | 2 cut(s) | 3231, 3279 |
| EcoT22I | ATGCAT | 2 cut(s) | 1592, 2660 |
| EcoT38I | GRGCYC | 2 cut(s) | 1900, 3279 |
| ErhI | CCWWGG | 2 cut(s) | 3231, 3279 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1546, 1578, 3107, 3139 |
| FaqI | GGGAC | 1 cut(s) | 3082 |
| FauNDI | CATATG | 1 cut(s) | 3819 |
| Fnu4HI | GCNGC | 7 cut(s) | 261, 545, 861, 1010, 1885, 2398, 3048 |
| FriOI | GRGCYC | 2 cut(s) | 1900, 3279 |
| Fsp4HI | GCNGC | 7 cut(s) | 261, 545, 861, 1010, 1885, 2398, 3048 |
| FspI | TGCGCA | 1 cut(s) | 1489 |
| GlaI | GCGC | 2 cut(s) | 1489, 2265 |
| GluI | GCNGC | 7 cut(s) | 261, 545, 861, 1010, 1885, 2398, 3048 |
| GsaI | CCCAGC | 3 cut(s) | 1424, 1448, 1702 |
| GsuI | CTGGAG | 4 cut(s) | 153, 815, 1313, 1490 |
| HaeIII | GGCC | 4 cut(s) | 569, 1259, 1884, 2195 |
| HapII | CCGG | 2 cut(s) | 302, 3914 |
| HgaI | GACGC | 1 cut(s) | 2994 |
| HhaI | GCGC | 2 cut(s) | 1490, 2266 |
| Hin1I | GRCGYC | 1 cut(s) | 2986 |
| Hin6I | GCGC | 2 cut(s) | 1488, 2264 |
| HinP1I | GCGC | 2 cut(s) | 1488, 2264 |
| HindIII | AAGCTT | 4 cut(s) | 960, 2755, 3035, 3121 |
| HpaII | CCGG | 2 cut(s) | 302, 3914 |
| HphI | GGTGA | 8 cut(s) | 107, 383, 590, 654, 989, 1724, 2324, 3842 |
| Hpy166II | GTNNAC | 5 cut(s) | 374, 980, 2584, 3295, 3788 |
| Hpy8I | GTNNAC | 5 cut(s) | 374, 980, 2584, 3295, 3788 |
| Hpy99I | CGWCG | 2 cut(s) | 2970, 2988 |
| HpyCH4IV | ACGT | 1 cut(s) | 588 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 650, 2100, 2225, 2465, 2497, 3524 |
| HpySE526I | ACGT | 1 cut(s) | 588 |
| Hsp92I | GRCGYC | 1 cut(s) | 2986 |
| HspAI | GCGC | 2 cut(s) | 1488, 2264 |
| LguI | GCTCTTC | 1 cut(s) | 3267 |
| LmnI | GCTCC | 4 cut(s) | 1318, 1562, 2383, 3856 |
| Lsp1109I | GCAGC | 6 cut(s) | 247, 556, 847, 996, 2409, 3034 |
| LweI | GCATC | 8 cut(s) | 1012, 1977, 2645, 2909, 2925, 3000, 3463, 3634 |
| MabI | ACCWGGT | 1 cut(s) | 391 |
| MaeII | ACGT | 1 cut(s) | 588 |
| MfeI | CAATTG | 1 cut(s) | 204 |
| MflI | RGATCY | 8 cut(s) | 25, 50, 308, 779, 814, 1060, 1147, 2773 |
| MhlI | GDGCHC | 4 cut(s) | 66, 1900, 3279, 3297 |
| MlyI | GAGTC | 7 cut(s) | 164, 458, 509, 575, 797, 920, 2248 |
| MmeI | TCCRAC | 2 cut(s) | 753, 2405 |
| Mph1103I | ATGCAT | 2 cut(s) | 1592, 2660 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2757 |
| MslI | CAYNNNNRTG | 5 cut(s) | 36, 1786, 2792, 2909, 3300 |
| MspA1I | CMGCKG | 2 cut(s) | 2228, 2400 |
| MspI | CCGG | 2 cut(s) | 302, 3914 |
| MunI | CAATTG | 1 cut(s) | 204 |
| Mva1269I | GAATGC | 2 cut(s) | 2658, 2717 |
| MvnI | CGCG | 1 cut(s) | 2266 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 650, 2100, 2225, 2465, 2497, 3524 |
| NciI | CCSGG | 1 cut(s) | 302 |
| NcoI | CCATGG | 1 cut(s) | 3279 |
| NdeI | CATATG | 1 cut(s) | 3819 |
| NheI | GCTAGC | 1 cut(s) | 104 |
| NlaIV | GGNNCC | 7 cut(s) | 52, 568, 709, 816, 1551, 2775, 3328 |
| NmuCI | GTSAC | 5 cut(s) | 95, 481, 578, 715, 947 |
| NsbI | TGCGCA | 1 cut(s) | 1489 |
| NsiI | ATGCAT | 2 cut(s) | 1592, 2660 |
| NspI | RCATGY | 4 cut(s) | 1706, 2543, 3219, 3503 |
| PagI | TCATGA | 1 cut(s) | 2509 |
| PceI | AGGCCT | 1 cut(s) | 2195 |
| PciI | ACATGT | 3 cut(s) | 2539, 3215, 3499 |
| PciSI | GCTCTTC | 1 cut(s) | 3267 |
| PctI | GAATGC | 2 cut(s) | 2658, 2717 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2757 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 963, 1705 |
| PfoI | TCCNGGA | 5 cut(s) | 300, 2240, 3151, 3208, 3672 |
| PkrI | GCNGC | 7 cut(s) | 262, 546, 862, 1011, 1886, 2399, 3049 |
| PleI | GAGTC | 7 cut(s) | 163, 458, 508, 575, 797, 919, 2248 |
| PpsI | GAGTC | 7 cut(s) | 163, 458, 508, 575, 797, 919, 2248 |
| PscI | ACATGT | 3 cut(s) | 2539, 3215, 3499 |
| PshBI | ATTAAT | 3 cut(s) | 1044, 1236, 2616 |
| PsiI | TTATAA | 1 cut(s) | 255 |
| Psp124BI | GAGCTC | 1 cut(s) | 1900 |
| PspEI | GGTNACC | 1 cut(s) | 1604 |
| PspFI | CCCAGC | 3 cut(s) | 1420, 1444, 1698 |
| PspN4I | GGNNCC | 7 cut(s) | 52, 568, 709, 816, 1551, 2775, 3328 |
| PspPI | GGNCC | 4 cut(s) | 287, 567, 1035, 3413 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1959, 1991, 3205, 3237 |
| PstI | CTGCAG | 5 cut(s) | 865, 1014, 1461, 2382, 2866 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1112, 1361, 2123 |
| PsuI | RGATCY | 8 cut(s) | 25, 50, 308, 779, 814, 1060, 1147, 2773 |
| PvuII | CAGCTG | 2 cut(s) | 2228, 2400 |
| RsaI | GTAC | 7 cut(s) | 1475, 2544, 2813, 3358, 3424, 3492, 3847 |
| RsaNI | GTAC | 7 cut(s) | 1474, 2543, 2812, 3357, 3423, 3491, 3846 |
| RseI | CAYNNNNRTG | 5 cut(s) | 36, 1786, 2792, 2909, 3300 |
| SacI | GAGCTC | 1 cut(s) | 1900 |
| SapI | GCTCTTC | 1 cut(s) | 3267 |
| SatI | GCNGC | 7 cut(s) | 261, 545, 861, 1010, 1885, 2398, 3048 |
| Sau96I | GGNCC | 4 cut(s) | 287, 567, 1035, 3413 |
| ScaI | AGTACT | 1 cut(s) | 3847 |
| SchI | GAGTC | 7 cut(s) | 164, 458, 509, 575, 797, 920, 2248 |
| SduI | GDGCHC | 4 cut(s) | 66, 1900, 3279, 3297 |
| SexAI | ACCWGGT | 1 cut(s) | 391 |
| SfaNI | GCATC | 8 cut(s) | 1012, 1977, 2645, 2909, 2925, 3000, 3463, 3634 |
| SfcI | CTRYAG | 9 cut(s) | 459, 702, 861, 1010, 1457, 2378, 2862, 2895, 3687 |
| SinI | GGWCC | 3 cut(s) | 287, 1035, 3413 |
| SmiI | ATTTAAAT | 1 cut(s) | 2482 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 36, 1786, 2792, 2909, 3300 |
| SmlI | CTYRAG | 2 cut(s) | 2256, 3167 |
| SmoI | CTYRAG | 2 cut(s) | 2256, 3167 |
| SseBI | AGGCCT | 1 cut(s) | 2195 |
| SsiI | CCGC | 9 cut(s) | 312, 743, 824, 883, 967, 1885, 2251, 2301, 3629 |
| SspI | AATATT | 2 cut(s) | 1042, 1576 |
| SstI | GAGCTC | 1 cut(s) | 1900 |
| StuI | AGGCCT | 1 cut(s) | 2195 |
| StyI | CCWWGG | 2 cut(s) | 3231, 3279 |
| SwaI | ATTTAAAT | 1 cut(s) | 2482 |
| TaiI | ACGT | 1 cut(s) | 591 |
| TaqI | TCGA | 6 cut(s) | 498, 1222, 1861, 2628, 2959, 3663 |
| TatI | WGTACW | 4 cut(s) | 2542, 2811, 3490, 3845 |
| TauI | GCSGC | 1 cut(s) | 1887 |
| TseFI | GTSAC | 5 cut(s) | 95, 481, 578, 715, 947 |
| TseI | GCWGC | 6 cut(s) | 260, 544, 860, 1009, 2397, 3047 |
| Tsp45I | GTSAC | 5 cut(s) | 95, 481, 578, 715, 947 |
| TspGWI | ACGGA | 1 cut(s) | 3464 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 963, 1705 |
| VneI | GTGCAC | 1 cut(s) | 3293 |
| VpaK11BI | GGWCC | 3 cut(s) | 287, 1035, 3413 |
| VspI | ATTAAT | 3 cut(s) | 1044, 1236, 2616 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 396, 2781 |
| XapI | RAATTY | 6 cut(s) | 279, 1081, 2842, 3344, 3667, 3677 |
| XbaI | TCTAGA | 4 cut(s) | 272, 1784, 1871, 1892 |
| XceI | RCATGY | 4 cut(s) | 1706, 2543, 3219, 3503 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1706, 2542, 3058 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2757 |
| ZrmI | AGTACT | 1 cut(s) | 3847 |
| Zsp2I | ATGCAT | 2 cut(s) | 1592, 2660 |